No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0464961 RchiOBHm_Chr6g0255261 |
| rosa_laevigata | RLG00000009797 RLG00000013904 RLG00000017951 RLG00000020592 RLG00000031953 |
| rosa_multiflora | Rmu_sc0007235.1_g000002 |
| rosa_roxburghii | Rroxscaffold_178G00437270 Rroxscaffold_1G00042710 Rroxscaffold_2G00108680 Rroxscaffold_2G00153900 Rroxscaffold_7G00205440 |
| rosa_samantha | Rh2AG195700 Rh2AG195800 Rh2DG203200 Rh2DG203300 Rh3AG324200 Rh3BG241700 Rh3BG314600 Rh3CG356600 Rh4AG041500 Rh4AG218600 Rh4DG143100 Rh4DG145700 Rh4DG308900 Rh6BG089000 Rh6CG041500 Rh6DG037800 Rh7AG355100 Rh7BG392400 Rh7CG372300 |
| rosa_wichuraiana | Rw4G012260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 10 |
| AccB1I | GGYRCC | 3 cut(s) | 10, 70, 130 |
| AfaI | GTAC | 1 cut(s) | 12 |
| AgsI | TTSAA | 2 cut(s) | 164, 227 |
| AluBI | AGCT | 1 cut(s) | 44 |
| AluI | AGCT | 1 cut(s) | 44 |
| Alw26I | GTCTC | 2 cut(s) | 32, 92 |
| AoxI | GGCC | 1 cut(s) | 229 |
| ApeKI | GCWGC | 1 cut(s) | 113 |
| Asp718I | GGTACC | 1 cut(s) | 10 |
| AsuHPI | GGTGA | 1 cut(s) | 227 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 27 |
| BanI | GGYRCC | 3 cut(s) | 10, 70, 130 |
| BbvI | GCAGC | 1 cut(s) | 100 |
| BccI | CCATC | 2 cut(s) | 22, 182 |
| BciVI | GTATCC | 1 cut(s) | 168 |
| BcoDI | GTCTC | 2 cut(s) | 32, 92 |
| BfaI | CTAG | 2 cut(s) | 54, 292 |
| BfuI | GTATCC | 1 cut(s) | 168 |
| BisI | GCNGC | 1 cut(s) | 114 |
| BlsI | GCNGC | 1 cut(s) | 115 |
| BmiI | GGNNCC | 3 cut(s) | 12, 72, 132 |
| BmsI | GCATC | 1 cut(s) | 251 |
| BseMII | CTCAG | 1 cut(s) | 263 |
| BseXI | GCAGC | 1 cut(s) | 100 |
| BshFI | GGCC | 1 cut(s) | 231 |
| BshNI | GGYRCC | 3 cut(s) | 10, 70, 130 |
| BsmAI | GTCTC | 2 cut(s) | 32, 92 |
| BsmI | GAATGC | 1 cut(s) | 28 |
| BsnI | GGCC | 1 cut(s) | 231 |
| BspANI | GGCC | 1 cut(s) | 231 |
| BspCNI | CTCAG | 1 cut(s) | 262 |
| BspLI | GGNNCC | 3 cut(s) | 12, 72, 132 |
| BspT107I | GGYRCC | 3 cut(s) | 10, 70, 130 |
| BstDEI | CTNAG | 1 cut(s) | 249 |
| BstMAI | GTCTC | 2 cut(s) | 32, 92 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 50 |
| BstV1I | GCAGC | 1 cut(s) | 100 |
| BsuI | GTATCC | 1 cut(s) | 168 |
| BsuRI | GGCC | 1 cut(s) | 231 |
| CseI | GACGC | 1 cut(s) | 13 |
| Csp6I | GTAC | 1 cut(s) | 11 |
| CviJI | RGCY | 3 cut(s) | 44, 231, 253 |
| CviKI_1 | RGCY | 3 cut(s) | 44, 231, 253 |
| CviQI | GTAC | 1 cut(s) | 11 |
| DdeI | CTNAG | 1 cut(s) | 249 |
| EcoT22I | ATGCAT | 1 cut(s) | 244 |
| FaiI | YATR | 2 cut(s) | 20, 240 |
| Fnu4HI | GCNGC | 1 cut(s) | 114 |
| Fsp4HI | GCNGC | 1 cut(s) | 114 |
| FspBI | CTAG | 2 cut(s) | 54, 292 |
| GluI | GCNGC | 1 cut(s) | 114 |
| HaeIII | GGCC | 1 cut(s) | 231 |
| HgaI | GACGC | 1 cut(s) | 13 |
| HinfI | GANTC | 1 cut(s) | 142 |
| HphI | GGTGA | 1 cut(s) | 227 |
| HpyAV | CCTTC | 1 cut(s) | 221 |
| HpyCH4IV | ACGT | 1 cut(s) | 153 |
| HpyCH4V | TGCA | 2 cut(s) | 26, 242 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 50 |
| HpyF3I | CTNAG | 1 cut(s) | 249 |
| HpySE526I | ACGT | 1 cut(s) | 153 |
| KpnI | GGTACC | 1 cut(s) | 14 |
| LmnI | GCTCC | 1 cut(s) | 49 |
| LpnPI | CCDG | 1 cut(s) | 113 |
| Lsp1109I | GCAGC | 1 cut(s) | 100 |
| LweI | GCATC | 1 cut(s) | 251 |
| MaeI | CTAG | 2 cut(s) | 54, 292 |
| MaeII | ACGT | 1 cut(s) | 153 |
| MaeIII | GTNAC | 1 cut(s) | 154 |
| MboII | GAAGA | 1 cut(s) | 237 |
| MfeI | CAATTG | 1 cut(s) | 198 |
| MluCI | AATT | 2 cut(s) | 164, 198 |
| MnlI | CCTC | 2 cut(s) | 61, 196 |
| Mph1103I | ATGCAT | 1 cut(s) | 244 |
| MunI | CAATTG | 1 cut(s) | 198 |
| Mva1269I | GAATGC | 1 cut(s) | 28 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 50 |
| NlaIV | GGNNCC | 3 cut(s) | 12, 72, 132 |
| NmuCI | GTSAC | 1 cut(s) | 154 |
| NsiI | ATGCAT | 1 cut(s) | 244 |
| PctI | GAATGC | 1 cut(s) | 28 |
| PfeI | GAWTC | 1 cut(s) | 142 |
| PkrI | GCNGC | 1 cut(s) | 115 |
| PspN4I | GGNNCC | 3 cut(s) | 12, 72, 132 |
| RsaI | GTAC | 1 cut(s) | 12 |
| RsaNI | GTAC | 1 cut(s) | 11 |
| SatI | GCNGC | 1 cut(s) | 114 |
| SetI | ASST | 5 cut(s) | 46, 72, 132, 156, 172 |
| SfaNI | GCATC | 1 cut(s) | 251 |
| SgeI | CNNG | 7 cut(s) | 20, 60, 66, 87, 140, 166, 281 |
| Sse9I | AATT | 2 cut(s) | 164, 198 |
| SspI | AATATT | 1 cut(s) | 94 |
| SspMI | CTAG | 2 cut(s) | 54, 292 |
| TaiI | ACGT | 1 cut(s) | 156 |
| TasI | AATT | 2 cut(s) | 164, 198 |
| TfiI | GAWTC | 1 cut(s) | 142 |
| TseFI | GTSAC | 1 cut(s) | 154 |
| TseI | GCWGC | 1 cut(s) | 113 |
| Tsp45I | GTSAC | 1 cut(s) | 154 |
| TspDTI | ATGAA | 3 cut(s) | 35, 99, 249 |
| XspI | CTAG | 2 cut(s) | 54, 292 |
| Zsp2I | ATGCAT | 1 cut(s) | 244 |