Rh7AG262100

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0004249
Physical Location & Seq
Reverse (-)
26817702 .. 26820395
2694 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG262100.1

Sequence Viewer

Length: 210 bp
ATGTTTAGAGCTCTAGCATGCTTGCATAAACAGGGTGTGGTGCACAGAGATGTTAAGCCCGGAAACTTCCTCTTCTCTCAGAAGCTAAGCAAAGGTTACCTGATTAATTTCAACCTTGCCATGCAGTCTAATGTCAGTGATGATGGAATAGCTGAACACATTAAAGAAGCAAATATTCAAAATCACACAGCTAAGAAGGATATCCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04110 ko04111 ko04113 map04110 map04111 map04113
Pfam Domains
Protein Families
Pkinase

Protein Analysis

69

Amino Acids

7.76

Weight (kDa)

9.3

Isoelectric Point (pI)

34.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 2 - 44 5.5e-08 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 112, 179
AluBI AGCT 4 cut(s) 11, 85, 152, 191
AluI AGCT 4 cut(s) 11, 85, 152, 191
Alw21I GWGCWC 2 cut(s) 13, 45
Alw44I GTGCAC 1 cut(s) 41
ApaLI GTGCAC 1 cut(s) 41
AseI ATTAAT 1 cut(s) 105
AsuC2I CCSGG 1 cut(s) 60
BaeGI GKGCMC 1 cut(s) 45
BanII GRGCYC 1 cut(s) 13
Bbv12I GWGCWC 2 cut(s) 13, 45
BccI CCATC 1 cut(s) 137
BcnI CCSGG 1 cut(s) 60
BfaI CTAG 1 cut(s) 14
BlpI GCTNAGC 1 cut(s) 86
Bme1390I CCNGG 1 cut(s) 60
BmrFI CCNGG 1 cut(s) 60
Bpu1102I GCTNAGC 1 cut(s) 86
BpuMI CCSGG 1 cut(s) 60
BseMII CTCAG 1 cut(s) 92
BseSI GKGCMC 1 cut(s) 45
BsiHKAI GWGCWC 2 cut(s) 13, 45
BsiSI CCGG 1 cut(s) 60
Bsp1286I GDGCHC 2 cut(s) 13, 45
Bsp1720I GCTNAGC 1 cut(s) 86
BspCNI CTCAG 1 cut(s) 91
Bst6I CTCTTC 1 cut(s) 77
BstC8I GCNNGC 2 cut(s) 19, 23
BstDEI CTNAG 3 cut(s) 78, 86, 192
BstEII GGTNACC 1 cut(s) 95
BstNSI RCATGY 1 cut(s) 21
BstPI GGTNACC 1 cut(s) 95
BstSCI CCNGG 1 cut(s) 58
BstSLI GKGCMC 1 cut(s) 45
BtsIMutI CAGTG 1 cut(s) 142
Cac8I GCNNGC 2 cut(s) 19, 23
CviAII CATG 2 cut(s) 18, 121
CviJI RGCY 5 cut(s) 11, 58, 85, 152, 191
CviKI_1 RGCY 5 cut(s) 11, 58, 85, 152, 191
DdeI CTNAG 3 cut(s) 78, 86, 192
Eam1104I CTCTTC 1 cut(s) 77
EarI CTCTTC 1 cut(s) 77
Ecl136II GAGCTC 1 cut(s) 11
Eco24I GRGCYC 1 cut(s) 13
Eco32I GATATC 1 cut(s) 202
Eco53kI GAGCTC 1 cut(s) 11
Eco91I GGTNACC 1 cut(s) 95
EcoICRI GAGCTC 1 cut(s) 11
EcoO65I GGTNACC 1 cut(s) 95
EcoRV GATATC 1 cut(s) 202
EcoT38I GRGCYC 1 cut(s) 13
FaeI CATG 2 cut(s) 21, 124
FaiI YATR 3 cut(s) 19, 27, 122
FatI CATG 2 cut(s) 17, 120
FriOI GRGCYC 1 cut(s) 13
FspBI CTAG 1 cut(s) 14
HapII CCGG 1 cut(s) 60
Hin1II CATG 2 cut(s) 21, 124
HpaII CCGG 1 cut(s) 60
Hpy166II GTNNAC 1 cut(s) 43
Hpy188I TCNGA 2 cut(s) 81, 209
Hpy8I GTNNAC 1 cut(s) 43
HpyAV CCTTC 1 cut(s) 190
HpyCH4V TGCA 3 cut(s) 25, 43, 124
HpyF3I CTNAG 3 cut(s) 78, 86, 192
Hsp92II CATG 2 cut(s) 21, 124
LpnPI CCDG 3 cut(s) 17, 73, 113
MaeI CTAG 1 cut(s) 14
MaeIII GTNAC 1 cut(s) 95
MboII GAAGA 1 cut(s) 64
MhlI GDGCHC 2 cut(s) 13, 45
MluCI AATT 1 cut(s) 106
MnlI CCTC 1 cut(s) 80
MseI TTAA 3 cut(s) 54, 105, 162
MslI CAYNNNNRTG 1 cut(s) 48
MspI CCGG 1 cut(s) 60
MspR9I CCNGG 1 cut(s) 60
NciI CCSGG 1 cut(s) 60
NlaIII CATG 2 cut(s) 21, 124
NspI RCATGY 1 cut(s) 21
PaeI GCATGC 1 cut(s) 21
PshBI ATTAAT 1 cut(s) 105
Psp124BI GAGCTC 1 cut(s) 13
PspEI GGTNACC 1 cut(s) 95
RseI CAYNNNNRTG 1 cut(s) 48
SacI GAGCTC 1 cut(s) 13
SaqAI TTAA 3 cut(s) 54, 105, 162
ScrFI CCNGG 1 cut(s) 60
SduI GDGCHC 2 cut(s) 13, 45
SetI ASST 7 cut(s) 13, 87, 97, 102, 117, 154, 193
SgeI CNNG 9 cut(s) 26, 30, 34, 44, 71, 72, 112, 128, 133
SmiMI CAYNNNNRTG 1 cut(s) 48
SphI GCATGC 1 cut(s) 21
Sse9I AATT 1 cut(s) 106
SspI AATATT 1 cut(s) 175
SspMI CTAG 1 cut(s) 14
SstI GAGCTC 1 cut(s) 13
StyD4I CCNGG 1 cut(s) 58
TasI AATT 1 cut(s) 106
Tru1I TTAA 3 cut(s) 54, 105, 162
Tru9I TTAA 3 cut(s) 54, 105, 162
TscAI CASTG 1 cut(s) 142
TspRI CASTG 1 cut(s) 142
VneI GTGCAC 1 cut(s) 41
VspI ATTAAT 1 cut(s) 105
XceI RCATGY 1 cut(s) 21
XspI CTAG 1 cut(s) 14
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.