Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0004837

Physical Location & Seq

Genomic Coordinates Reverse (-)

12006301 .. 12008570

Gene Structure 2270 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G005940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGCTTTTTGAAACAATAGAAGAAGCCAGAAAGGATTATGAAGATTATGGTCGGCAAGAAGGATTTTGGATTCGAACTCAATCTTCAAGTAAGACAAGATCACATTCGGACGAGGTGACTAGTTGTCATTTCGTTTGTGCACATCAAGGAAAATATATCTGGAAGAAAAAGATTAATGAGGAGTGGAGAAAAAACCAGCAGAGAGAGACTTGTGAGAATGAGAATGAAATTGGAGATGAGAATGGGAATGAGAATGTTGATAAAGGCAGATATATGAATATAAAGAAAGTAGGTAAAAATTGTTCTACAGCGAAATGTGGGTGCAAAGCTAGTATGCGAGTCATTCATGAGAAGTGGTCGAACAAATGGAGAGTATCTGTTTTTAGGGACTTTCACAATCATAAACTAGTTACTCCAGCAAGAAGAATGACGATGAAGTCAAATAAACATATGCCTAAAGTAGCGAGGAGTATGACTGAAATATTCCATAAAGAAAATTTGCCGATTGCAAAAGTTCATTCAATCCTTGGTGGTGCTCAAATTGGTTTTAACAAAAGAGATTGTTATAACCACTTAAGAAATGTTCGTCACAGACAATTGGATGGAGGAGATGCTCAATCAGTCTTCACTTACTTCAAGAAAAAGCAAGCTGAGAATCCCCAATTCTTTTATGCAATCCAATGCGACGAAGATGGAAGAGCAACTAATTTCTTTTGGGTCGACTCTCGATCACGGACAGCTTATGAATATTTTGGAGATGTGGTCACATTCGACACAACTTATAGGACAAACAAGTATGATATGCCGTTTGCGCCATTCACAGGAGTAAACCACCACTGGCAATCAATACAATTCGGCTGTGCACTTCTACAAGATGAGACGGAGGCTACCTTTTTTTGGTTATTTGAGACATGGCTAGAAGCAATGGGAGGTCACTTGGCAACGAAAGGAGCAATTGCCAAGATATTTCCAAATACTCGCCATAGTTTATGCCTTTGGCATATCAAGAAGAAGTTTGTTGAGAAGCTGTCCCATGTGTACTATAAGAAATCGAAATTCAAGAAGGAGATGAAGAAATGTATTCAATTAACATACAAGACTGAAGATTTTGAAGAAAAATGGAAGACTTTGATGACAGAAAATGGATTGGAAGAAAATGAATGGTTAAATAATCTTTATGAGATACGTACTTCTTGGGTGCCTGTTTATCATCGTGGAACATTTTTTGCAGGAATGAATACTACTGGACGTAGTGAGGGAATTAATTCATTTTTCAATGGATTTGTTACTTCAACAACAAATCTTAGAGAATTTGTTGTTAAATATGATCAAGCACTAAAGAGGATTATAGATAATGAAAGTGATGAAGACTTTGAAACAGAACACAAGTTTCGTATCGTGAATGATGATGAATTCCTTTTGAAAGATGCAGCAAAGTTGTATACCAGAAATGTTTTCAACAAATTCAAGGTACAATGGAGTCAAATTAAGCACTACAAGGTTGACGAAAGGGAATGCGACAATGAATGGCACTCATACCTGGTGAAAAAAAGACTTGGAGAACATGAGCAAGATTTTATGGTGAAGTTAGATTTGACAACATACAAGGGCTCTCGTGAGTGCCAAAACTTTGAGTTTGTTGGAATACTTTGTCGGCACTTGTTAAAAGTATTTTCATGTCTGGATATTGAAACAATACCAGCACATTTTATTCTTCCAAGATGGAGACAAGAAGCAAACAAATTTAGGATAATGGATTCTGAAGATTTGGTGAAAAGTGTTGGTAAAGAAGAATCAGAAGCTGTAAGACTTAGCCATATGTGTCACCAAGCAACTAAATTGGCCTGTATTGCTGCACCTTCAAAGGAGGGATACACAATCTTCATGGATGCTTTAAATGAAGTATCAAGAAAATTGCCAAAAATTTCAGATCAGCCTGCTATCATTAGGGAAATGAGTGTTCCTCTAAACCAAGATGATCATACTACCATAGAAACTAGTGCTTCCCCAAATAGAGATGATCCATGTACTAATATTCTTTCTTCCCAGTCATTGCTCTTGGACCCAAATATCTCTAAGACCAAAGGTAGGAAGAAAGAAACTAAGAGTTCTGGCAGAATAAAGAGTGGTGTTGAGTTGGCCATGGAGACAGGGAAAAGAAGGTGTACATTATGCTCCAAGTCAGGACACAACAAACAAACTTGTTCTTTGAATTCACAAAGAAGAAAGATTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

4HBT

Protein Analysis

745

Amino Acids

87.24

Weight (kDa)

9.0

Isoelectric Point (pI)

47.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	13 - 137	2.7e-08	FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like	PF21056	219 - 305	7.8e-06	Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE	PF10551	254 - 338	3.4e-21	MULE transposase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004837)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g22662 FvH4_1g25683 FvH4_2g07931 FvH4_2g15201 FvH4_2g18171 FvH4_3g27581 FvH4_4g15802 FvH4_5g19941 FvH4_5g31091
prunus_persica	Prupe.2G091000_v2.0.a1 Prupe.3G154400_v2.0.a1 Prupe.4G246500_v2.0.a1 Prupe.5G036100_v2.0.a1 Prupe.6G155600_v2.0.a1
pyrus_communis	pycom04g09660
rosa_multiflora	Rmu_sc0000560.1_g000009 Rmu_sc0000904.1_g000004 Rmu_sc0001545.1_g000022 Rmu_sc0001889.1_g000029 Rmu_sc0004268.1_g000012 Rmu_sc0004950.1_g000005 Rmu_sc0005030.1_g000001 Rmu_sc0005030.1_g000002
rosa_rugosa	Rorug02G0462700 Rorug03G0258300 Rorug03G0294500 Rorug05G0293500
rosa_wichuraiana	Rw4G005940 Rw5G008400 Rw5G027240 Rw5G038170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	567
AasI	GACNNNNNNGTC	1 cut(s)	436
AccB1I	GGYRCC	1 cut(s)	1198
AccI	GTMKAC	2 cut(s)	720, 1442
AclWI	GGATC	1 cut(s)	2015
AcoI	YGGCCR	1 cut(s)	2139
AcsI	RAATTY	8 cut(s)	496, 1055, 1310, 1412, 1463, 1742, 1923, 2212
AcuI	CTGAAG	2 cut(s)	1122, 1782
AfaI	GTAC	5 cut(s)	1040, 1189, 1473, 2029, 2167
AfiI	CCNNNNNNNGG	3 cut(s)	821, 897, 2088
AflII	CTTAAG	1 cut(s)	574
AhdI	GACNNNNNGTC	1 cut(s)	123
AhlI	ACTAGT	3 cut(s)	119, 406, 1997
AjnI	CCWGG	1 cut(s)	1539
AluBI	AGCT	5 cut(s)	329, 650, 740, 1027, 1802
AluI	AGCT	5 cut(s)	329, 650, 740, 1027, 1802
Alw21I	GWGCWC	3 cut(s)	142, 538, 865
Alw26I	GTCTC	5 cut(s)	200, 872, 902, 1720, 2141
Alw44I	GTGCAC	2 cut(s)	138, 861
AlwI	GGATC	1 cut(s)	2015
AlwNI	CAGNNNCTG	1 cut(s)	1802
AoxI	GGCC	2 cut(s)	1842, 2139
ApaLI	GTGCAC	2 cut(s)	138, 861
ApeKI	GCWGC	2 cut(s)	1430, 1853
ApoI	RAATTY	8 cut(s)	496, 1055, 1310, 1412, 1463, 1742, 1923, 2212
AseI	ATTAAT	2 cut(s)	174, 1263
Asp700I	GAANNNNTTC	1 cut(s)	1264
AspLEI	GCGC	1 cut(s)	814
AspS9I	GGNCC	1 cut(s)	2062
AsuHPI	GGTGA	5 cut(s)	127, 1555, 1594, 1783, 1817
AsuII	TTCGAA	1 cut(s)	73
AvaII	GGWCC	1 cut(s)	2062
BaeGI	GKGCMC	2 cut(s)	142, 865
BalI	TGGCCA	1 cut(s)	2141
BanI	GGYRCC	1 cut(s)	1198
BanII	GRGCYC	1 cut(s)	1613
BauI	CACGAG	1 cut(s)	1614
BbsI	GAAGAC	3 cut(s)	616, 1130, 1374
Bbv12I	GWGCWC	3 cut(s)	142, 538, 865
BbvI	GCAGC	2 cut(s)	1442, 1840
BccI	CCATC	3 cut(s)	596, 686, 1716
BceAI	ACGGC	1 cut(s)	790
BciT130I	CCWGG	1 cut(s)	1541
BciVI	GTATCC	1 cut(s)	1865
BclI	TGATCA	2 cut(s)	1327, 1978
BcoDI	GTCTC	5 cut(s)	200, 872, 902, 1720, 2141
BcuI	ACTAGT	3 cut(s)	119, 406, 1997
BfaI	CTAG	5 cut(s)	120, 330, 407, 917, 1998
BfmI	CTRYAG	1 cut(s)	306
BfrI	CTTAAG	1 cut(s)	574
BfuI	GTATCC	1 cut(s)	1865
BisI	GCNGC	2 cut(s)	1431, 1854
BlsI	GCNGC	2 cut(s)	1432, 1855
Bme1390I	CCNGG	1 cut(s)	1541
Bme18I	GGWCC	1 cut(s)	2062
BmeRI	GACNNNNNGTC	1 cut(s)	123
BmgT120I	GGNCC	1 cut(s)	2062
BmiI	GGNNCC	2 cut(s)	1200, 2064
BmrFI	CCNGG	1 cut(s)	1541
BmrI	ACTGGG	1 cut(s)	2041
BmsI	GCATC	3 cut(s)	601, 1417, 1879
BmuI	ACTGGG	1 cut(s)	2041
BpiI	GAAGAC	3 cut(s)	616, 1130, 1374
BplI	GAGNNNNNCTC	2 cut(s)	1948, 1980
BpmI	CTGGAG	1 cut(s)	399
Bpu14I	TTCGAA	1 cut(s)	73
BsaAI	YACGTR	1 cut(s)	1187
BsaJI	CCNNGG	2 cut(s)	526, 2142
BsaXI	ACNNNNNCTCC	2 cut(s)	747, 777
Bsc4I	CCNNNNNNNGG	3 cut(s)	821, 897, 2088
Bse1I	ACTGG	3 cut(s)	842, 1249, 2047
Bse3DI	GCAATG	2 cut(s)	930, 2051
BseBI	CCWGG	1 cut(s)	1541
BseDI	CCNNGG	2 cut(s)	526, 2142
BseGI	GGATG	2 cut(s)	607, 1894
BseLI	CCNNNNNNNGG	3 cut(s)	821, 897, 2088
BseMI	GCAATG	2 cut(s)	930, 2051
BseMII	CTCAG	1 cut(s)	642
BseNI	ACTGG	3 cut(s)	842, 1249, 2047
BseRI	GAGGAG	3 cut(s)	194, 481, 621
BseSI	GKGCMC	2 cut(s)	142, 865
BseXI	GCAGC	2 cut(s)	1442, 1840
BsgI	GTGCAG	1 cut(s)	1839
BshFI	GGCC	2 cut(s)	1844, 2141
BshNI	GGYRCC	1 cut(s)	1198
BsiHKAI	GWGCWC	3 cut(s)	142, 538, 865
BslFI	GGGAC	2 cut(s)	401, 1015
BslI	CCNNNNNNNGG	3 cut(s)	821, 897, 2088
BsmAI	GTCTC	5 cut(s)	200, 872, 902, 1720, 2141
BsmBI	CGTCTC	1 cut(s)	872
BsmFI	GGGAC	2 cut(s)	401, 1015
BsmI	GAATGC	1 cut(s)	1520
BsnI	GGCC	2 cut(s)	1844, 2141
Bsp119I	TTCGAA	1 cut(s)	73
Bsp1286I	GDGCHC	4 cut(s)	142, 538, 865, 1613
Bsp1407I	TGTACA	1 cut(s)	2165
Bsp143I	GATC	6 cut(s)	98, 728, 1327, 1930, 1978, 2020
Bsp19I	CCATGG	1 cut(s)	2142
BspANI	GGCC	2 cut(s)	1844, 2141
BspCNI	CTCAG	1 cut(s)	643
BspHI	TCATGA	1 cut(s)	346
BspLI	GGNNCC	2 cut(s)	1200, 2064
BspPI	GGATC	1 cut(s)	2015
BspQI	GCTCTTC	1 cut(s)	691
BspT104I	TTCGAA	1 cut(s)	73
BspT107I	GGYRCC	1 cut(s)	1198
BspTI	CTTAAG	1 cut(s)	574
BsrDI	GCAATG	2 cut(s)	930, 2051
BsrGI	TGTACA	1 cut(s)	2165
BsrI	ACTGG	3 cut(s)	842, 1249, 2047
BssECI	CCNNGG	2 cut(s)	526, 2142
BssMI	GATC	6 cut(s)	98, 728, 1327, 1930, 1978, 2020
BssNAI	GTATAC	1 cut(s)	1443
BssSI	CACGAG	1 cut(s)	1614
BssT1I	CCWWGG	2 cut(s)	526, 2142
Bst1107I	GTATAC	1 cut(s)	1443
Bst2BI	CACGAG	1 cut(s)	1614
Bst2UI	CCWGG	1 cut(s)	1541
Bst6I	CTCTTC	1 cut(s)	691
BstAFI	CTTAAG	1 cut(s)	574
BstAUI	TGTACA	1 cut(s)	2165
BstBAI	YACGTR	1 cut(s)	1187
BstBI	TTCGAA	1 cut(s)	73
BstC8I	GCNNGC	2 cut(s)	648, 1938
BstDEI	CTNAG	5 cut(s)	651, 1304, 1811, 2076, 2103
BstDSI	CCRYGG	1 cut(s)	2142
BstF5I	GGATG	2 cut(s)	607, 1894
BstHHI	GCGC	1 cut(s)	814
BstKTI	GATC	6 cut(s)	101, 731, 1330, 1933, 1981, 2023
BstMAI	GTCTC	5 cut(s)	200, 872, 902, 1720, 2141
BstMBI	GATC	6 cut(s)	98, 728, 1327, 1930, 1978, 2020
BstMWI	GCNNNNNNNGC	2 cut(s)	811, 1850
BstNI	CCWGG	1 cut(s)	1541
BstSCI	CCNGG	1 cut(s)	1539
BstSFI	CTRYAG	1 cut(s)	306
BstSLI	GKGCMC	2 cut(s)	142, 865
BstSNI	TACGTA	1 cut(s)	1187
BstV1I	GCAGC	2 cut(s)	1442, 1840
BstV2I	GAAGAC	3 cut(s)	616, 1130, 1374
BstZ17I	GTATAC	1 cut(s)	1443
BsuI	GTATCC	1 cut(s)	1865
BsuRI	GGCC	2 cut(s)	1844, 2141
BtgI	CCRYGG	1 cut(s)	2142
BtsCI	GGATG	2 cut(s)	607, 1894
BtsIMutI	CAGTG	1 cut(s)	835
Cac8I	GCNNGC	2 cut(s)	648, 1938
CaiI	CAGNNNCTG	1 cut(s)	1802
CciI	TCATGA	1 cut(s)	346
CfoI	GCGC	1 cut(s)	814
Cfr13I	GGNCC	1 cut(s)	2062
CsiI	ACCWGGT	1 cut(s)	1539
Csp6I	GTAC	5 cut(s)	1039, 1188, 1472, 2028, 2166
CviAII	CATG	8 cut(s)	347, 912, 1034, 1565, 1677, 1885, 2025, 2143
CviQI	GTAC	5 cut(s)	1039, 1188, 1472, 2028, 2166
DdeI	CTNAG	5 cut(s)	651, 1304, 1811, 2076, 2103
DpnI	GATC	6 cut(s)	100, 730, 1329, 1932, 1980, 2022
DpnII	GATC	6 cut(s)	98, 728, 1327, 1930, 1978, 2020
DraI	TTTAAA	1 cut(s)	1896
DrdI	GACNNNNNNGTC	1 cut(s)	436
DriI	GACNNNNNGTC	1 cut(s)	123
DseDI	GACNNNNNNGTC	1 cut(s)	436
EaeI	YGGCCR	1 cut(s)	2139
Eam1104I	CTCTTC	1 cut(s)	691
Eam1105I	GACNNNNNGTC	1 cut(s)	123
EarI	CTCTTC	1 cut(s)	691
Eco105I	TACGTA	1 cut(s)	1187
Eco130I	CCWWGG	2 cut(s)	526, 2142
Eco24I	GRGCYC	1 cut(s)	1613
Eco47I	GGWCC	1 cut(s)	2062
Eco57I	CTGAAG	2 cut(s)	1122, 1782
EcoRI	GAATTC	2 cut(s)	1412, 2212
EcoRII	CCWGG	1 cut(s)	1539
EcoT14I	CCWWGG	2 cut(s)	526, 2142
EcoT38I	GRGCYC	1 cut(s)	1613
ErhI	CCWWGG	2 cut(s)	526, 2142
Esp3I	CGTCTC	1 cut(s)	872
FaeI	CATG	8 cut(s)	350, 915, 1037, 1568, 1680, 1888, 2028, 2146
FaqI	GGGAC	2 cut(s)	401, 1015
FatI	CATG	8 cut(s)	346, 911, 1033, 1564, 1676, 1884, 2024, 2142
FauNDI	CATATG	2 cut(s)	450, 1818
FbaI	TGATCA	2 cut(s)	1327, 1978
FblI	GTMKAC	2 cut(s)	720, 1442
Fnu4HI	GCNGC	2 cut(s)	1431, 1854
FokI	GGATG	2 cut(s)	614, 1901
FriOI	GRGCYC	1 cut(s)	1613
Fsp4HI	GCNGC	2 cut(s)	1431, 1854
FspBI	CTAG	5 cut(s)	120, 330, 407, 917, 1998
GlaI	GCGC	1 cut(s)	813
GluI	GCNGC	2 cut(s)	1431, 1854
GsuI	CTGGAG	1 cut(s)	399
HaeIII	GGCC	2 cut(s)	1844, 2141
HhaI	GCGC	1 cut(s)	814
Hin1II	CATG	8 cut(s)	350, 915, 1037, 1568, 1680, 1888, 2028, 2146
Hin6I	GCGC	1 cut(s)	812
HinP1I	GCGC	1 cut(s)	812
HincII	GTYRAC	2 cut(s)	721, 1504
HindII	GTYRAC	2 cut(s)	721, 1504
HinfI	GANTC	8 cut(s)	70, 339, 655, 722, 1480, 1757, 1793, 2230
HphI	GGTGA	5 cut(s)	127, 1555, 1594, 1783, 1817
Hpy166II	GTNNAC	8 cut(s)	140, 721, 829, 863, 1039, 1443, 1504, 2166
Hpy188I	TCNGA	4 cut(s)	109, 1762, 1798, 1930
Hpy8I	GTNNAC	8 cut(s)	140, 721, 829, 863, 1039, 1443, 1504, 2166
Hpy99I	CGWCG	1 cut(s)	689
HpyAV	CCTTC	4 cut(s)	53, 1057, 1869, 2154
HpyCH4IV	ACGT	2 cut(s)	1186, 1249
HpyCH4V	TGCA	8 cut(s)	140, 324, 509, 674, 863, 1229, 1430, 1856
HpyF10VI	GCNNNNNNNGC	2 cut(s)	811, 1850
HpyF3I	CTNAG	5 cut(s)	651, 1304, 1811, 2076, 2103
HpySE526I	ACGT	2 cut(s)	1186, 1249
Hsp92II	CATG	8 cut(s)	350, 915, 1037, 1568, 1680, 1888, 2028, 2146
HspAI	GCGC	1 cut(s)	812
Ksp22I	TGATCA	2 cut(s)	1327, 1978
Kzo9I	GATC	6 cut(s)	98, 728, 1327, 1930, 1978, 2020
LguI	GCTCTTC	1 cut(s)	691
LmnI	GCTCC	2 cut(s)	950, 2180
Lsp1109I	GCAGC	2 cut(s)	1442, 1840
LweI	GCATC	3 cut(s)	601, 1417, 1879
MabI	ACCWGGT	1 cut(s)	1539
MaeI	CTAG	5 cut(s)	120, 330, 407, 917, 1998
MaeII	ACGT	2 cut(s)	1186, 1249
MaeIII	GTNAC	7 cut(s)	115, 409, 587, 763, 932, 1285, 1823
MalI	GATC	6 cut(s)	100, 730, 1329, 1932, 1980, 2022
MboI	GATC	6 cut(s)	98, 728, 1327, 1930, 1978, 2020
MfeI	CAATTG	2 cut(s)	596, 954
MhlI	GDGCHC	4 cut(s)	142, 538, 865, 1613
MlsI	TGGCCA	1 cut(s)	2141
MluNI	TGGCCA	1 cut(s)	2141
MlyI	GAGTC	3 cut(s)	348, 716, 1489
MmeI	TCCRAC	1 cut(s)	1621
Mox20I	TGGCCA	1 cut(s)	2141
MroXI	GAANNNNTTC	1 cut(s)	1264
MscI	TGGCCA	1 cut(s)	2141
Msp20I	TGGCCA	1 cut(s)	2141
MspCI	CTTAAG	1 cut(s)	574
MspR9I	CCNGG	1 cut(s)	1541
MunI	CAATTG	2 cut(s)	596, 954
Mva1269I	GAATGC	1 cut(s)	1520
MvaI	CCWGG	1 cut(s)	1541
MwoI	GCNNNNNNNGC	2 cut(s)	811, 1850
NcoI	CCATGG	1 cut(s)	2142
NdeI	CATATG	2 cut(s)	450, 1818
NdeII	GATC	6 cut(s)	98, 728, 1327, 1930, 1978, 2020
NlaIII	CATG	8 cut(s)	350, 915, 1037, 1568, 1680, 1888, 2028, 2146
NlaIV	GGNNCC	2 cut(s)	1200, 2064
NmuCI	GTSAC	5 cut(s)	115, 587, 763, 932, 1823
NspV	TTCGAA	1 cut(s)	73
PagI	TCATGA	1 cut(s)	346
PciSI	GCTCTTC	1 cut(s)	691
PctI	GAATGC	1 cut(s)	1520
PdmI	GAANNNNTTC	1 cut(s)	1264
PfeI	GAWTC	5 cut(s)	70, 655, 1757, 1793, 2230
PkrI	GCNGC	2 cut(s)	1432, 1855
PleI	GAGTC	3 cut(s)	347, 716, 1488
PpsI	GAGTC	3 cut(s)	347, 716, 1488
Ppu21I	YACGTR	1 cut(s)	1187
PshBI	ATTAAT	2 cut(s)	174, 1263
PsiI	TTATAA	1 cut(s)	567
Psp6I	CCWGG	1 cut(s)	1539
PspGI	CCWGG	1 cut(s)	1539
PspN4I	GGNNCC	2 cut(s)	1200, 2064
PspPI	GGNCC	1 cut(s)	2062
PsrI	GAACNNNNNNTAC	2 cut(s)	286, 318
PstNI	CAGNNNCTG	1 cut(s)	1802
RsaI	GTAC	5 cut(s)	1040, 1189, 1473, 2029, 2167
RsaNI	GTAC	5 cut(s)	1039, 1188, 1472, 2028, 2166
SalI	GTCGAC	1 cut(s)	719
SapI	GCTCTTC	1 cut(s)	691
SatI	GCNGC	2 cut(s)	1431, 1854
Sau3AI	GATC	6 cut(s)	98, 728, 1327, 1930, 1978, 2020
Sau96I	GGNCC	1 cut(s)	2062
SchI	GAGTC	3 cut(s)	348, 716, 1489
ScrFI	CCNGG	1 cut(s)	1541
SduI	GDGCHC	4 cut(s)	142, 538, 865, 1613
SexAI	ACCWGGT	1 cut(s)	1539
SfaNI	GCATC	3 cut(s)	601, 1417, 1879
SfcI	CTRYAG	1 cut(s)	306
SfuI	TTCGAA	1 cut(s)	73
SinI	GGWCC	1 cut(s)	2062
SmlI	CTYRAG	1 cut(s)	574
SmoI	CTYRAG	1 cut(s)	574
SnaBI	TACGTA	1 cut(s)	1187
SpeI	ACTAGT	3 cut(s)	119, 406, 1997
SspI	AATATT	3 cut(s)	483, 749, 2035
SspMI	CTAG	5 cut(s)	120, 330, 407, 917, 1998
StyD4I	CCNGG	1 cut(s)	1539
StyI	CCWWGG	2 cut(s)	526, 2142
TaiI	ACGT	2 cut(s)	1189, 1252
TaqI	TCGA	6 cut(s)	73, 359, 720, 727, 771, 1052
TatI	WGTACW	3 cut(s)	1038, 2027, 2165
TfiI	GAWTC	5 cut(s)	70, 655, 1757, 1793, 2230
TscAI	CASTG	1 cut(s)	842
TseFI	GTSAC	5 cut(s)	115, 587, 763, 932, 1823
TseI	GCWGC	2 cut(s)	1430, 1853
Tsp45I	GTSAC	5 cut(s)	115, 587, 763, 932, 1823
TspGWI	ACGGA	2 cut(s)	748, 896
TspRI	CASTG	1 cut(s)	842
Vha464I	CTTAAG	1 cut(s)	574
VneI	GTGCAC	2 cut(s)	138, 861
VpaK11BI	GGWCC	1 cut(s)	2062
VspI	ATTAAT	2 cut(s)	174, 1263
XapI	RAATTY	8 cut(s)	496, 1055, 1310, 1412, 1463, 1742, 1923, 2212
XmiI	GTMKAC	2 cut(s)	720, 1442
XmnI	GAANNNNTTC	1 cut(s)	1264
XspI	CTAG	5 cut(s)	120, 330, 407, 917, 1998

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.