Involved in the biogenesis of the 60S ribosomal subunit
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NOG1_N | PF17835 | 35 - 194 | 6.9e-54 | NOG1 N-terminal helical domain |
| FeoB_N | PF02421 | 200 - 346 | 3.5e-07 | Ferrous iron transport protein B |
| MMR_HSR1 | PF01926 | 201 - 319 | 1e-16 | 50S ribosome-binding GTPase |
| NOG1 | PF06858 | 265 - 321 | 4.5e-24 | Nucleolar GTP-binding protein 1 (NOG1) |
| NOGCT | PF08155 | 419 - 472 | 1.2e-24 | NOGCT (NUC087) domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 1225, 1573 |
| AccII | CGCG | 1 cut(s) | 815 |
| AciI | CCGC | 5 cut(s) | 160, 169, 232, 813, 1130 |
| AclWI | GGATC | 2 cut(s) | 575, 1679 |
| AcsI | RAATTY | 1 cut(s) | 309 |
| AcuI | CTGAAG | 2 cut(s) | 1008, 1110 |
| AdeI | CACNNNGTG | 2 cut(s) | 51, 1976 |
| AfaI | GTAC | 4 cut(s) | 458, 502, 1081, 1884 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 623, 1892 |
| AflII | CTTAAG | 1 cut(s) | 1577 |
| AjiI | CACGTC | 1 cut(s) | 1973 |
| AjnI | CCWGG | 1 cut(s) | 1885 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 920, 952, 1316, 1348, 1461, 1493, 1511, 1543 |
| AleI | CACNNNNGTG | 1 cut(s) | 195 |
| Alw26I | GTCTC | 2 cut(s) | 16, 38 |
| AlwI | GGATC | 2 cut(s) | 575, 1679 |
| AoxI | GGCC | 1 cut(s) | 1865 |
| ApeKI | GCWGC | 5 cut(s) | 482, 833, 1532, 1604, 1967 |
| ApoI | RAATTY | 1 cut(s) | 309 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 330, 631, 1172 |
| AspS9I | GGNCC | 1 cut(s) | 521 |
| AsuC2I | CCSGG | 1 cut(s) | 756 |
| AsuHPI | GGTGA | 9 cut(s) | 103, 209, 458, 754, 802, 952, 1169, 1253, 1901 |
| AvaII | GGWCC | 1 cut(s) | 521 |
| AxyI | CCTNAGG | 1 cut(s) | 1230 |
| BbsI | GAAGAC | 3 cut(s) | 786, 1040, 1683 |
| BbvI | GCAGC | 5 cut(s) | 469, 820, 1519, 1616, 1954 |
| BccI | CCATC | 2 cut(s) | 14, 2008 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 450, 484 |
| BciT130I | CCWGG | 1 cut(s) | 1887 |
| BclI | TGATCA | 1 cut(s) | 1159 |
| BcnI | CCSGG | 1 cut(s) | 756 |
| BcoDI | GTCTC | 2 cut(s) | 16, 38 |
| BfaI | CTAG | 3 cut(s) | 525, 1311, 1722 |
| BfrI | CTTAAG | 1 cut(s) | 1577 |
| BglII | AGATCT | 4 cut(s) | 328, 1371, 1823, 1835 |
| BisI | GCNGC | 7 cut(s) | 170, 483, 834, 1131, 1533, 1605, 1968 |
| BlpI | GCTNAGC | 1 cut(s) | 885 |
| BlsI | GCNGC | 7 cut(s) | 171, 484, 835, 1132, 1534, 1606, 1969 |
| BmcAI | AGTACT | 1 cut(s) | 1081 |
| Bme1390I | CCNGG | 2 cut(s) | 756, 1887 |
| Bme18I | GGWCC | 1 cut(s) | 521 |
| BmgBI | CACGTC | 1 cut(s) | 1973 |
| BmgT120I | GGNCC | 1 cut(s) | 521 |
| BmiI | GGNNCC | 2 cut(s) | 1175, 1217 |
| BmrFI | CCNGG | 2 cut(s) | 756, 1887 |
| BmsI | GCATC | 5 cut(s) | 452, 816, 957, 1176, 1753 |
| BoxI | GACNNNNGTC | 1 cut(s) | 8 |
| BpiI | GAAGAC | 3 cut(s) | 786, 1040, 1683 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 257, 289 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 885 |
| BpuEI | CTTGAG | 2 cut(s) | 287, 1448 |
| BpuMI | CCSGG | 1 cut(s) | 756 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1828, 1852 |
| BsaI | GGTCTC | 1 cut(s) | 38 |
| BsaJI | CCNNGG | 2 cut(s) | 417, 755 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1284, 1314 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 623, 1892 |
| Bse21I | CCTNAGG | 1 cut(s) | 1230 |
| Bse3DI | GCAATG | 5 cut(s) | 558, 879, 1594, 1773, 2047 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1828, 1852 |
| BseBI | CCWGG | 1 cut(s) | 1887 |
| BseDI | CCNNGG | 2 cut(s) | 417, 755 |
| BseGI | GGATG | 4 cut(s) | 617, 1360, 1777, 1783 |
| BseJI | GATNNNNATC | 2 cut(s) | 1828, 1852 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 623, 1892 |
| BseMI | GCAATG | 5 cut(s) | 558, 879, 1594, 1773, 2047 |
| BseMII | CTCAG | 5 cut(s) | 179, 899, 1244, 1359, 1811 |
| BseXI | GCAGC | 5 cut(s) | 469, 820, 1519, 1616, 1954 |
| BseYI | CCCAGC | 1 cut(s) | 1295 |
| BsgI | GTGCAG | 2 cut(s) | 86, 1953 |
| Bsh1236I | CGCG | 1 cut(s) | 815 |
| BshFI | GGCC | 1 cut(s) | 1867 |
| BsiSI | CCGG | 1 cut(s) | 755 |
| BslFI | GGGAC | 1 cut(s) | 1973 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 623, 1892 |
| BsmAI | GTCTC | 2 cut(s) | 16, 38 |
| BsmBI | CGTCTC | 1 cut(s) | 16 |
| BsmFI | GGGAC | 1 cut(s) | 1973 |
| BsnI | GGCC | 1 cut(s) | 1867 |
| Bso31I | GGTCTC | 1 cut(s) | 38 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 885 |
| Bsp19I | CCATGG | 1 cut(s) | 417 |
| BspACI | CCGC | 5 cut(s) | 160, 169, 232, 813, 1130 |
| BspANI | GGCC | 1 cut(s) | 1867 |
| BspCNI | CTCAG | 5 cut(s) | 178, 898, 1243, 1360, 1812 |
| BspFNI | CGCG | 1 cut(s) | 815 |
| BspLI | GGNNCC | 2 cut(s) | 1175, 1217 |
| BspPI | GGATC | 2 cut(s) | 575, 1679 |
| BspQI | GCTCTTC | 1 cut(s) | 1577 |
| BspTI | CTTAAG | 1 cut(s) | 1577 |
| BspTNI | GGTCTC | 1 cut(s) | 38 |
| BsrDI | GCAATG | 5 cut(s) | 558, 879, 1594, 1773, 2047 |
| BssECI | CCNNGG | 2 cut(s) | 417, 755 |
| BssNAI | GTATAC | 1 cut(s) | 1226 |
| BssT1I | CCWWGG | 1 cut(s) | 417 |
| Bst1107I | GTATAC | 1 cut(s) | 1226 |
| Bst2UI | CCWGG | 1 cut(s) | 1887 |
| Bst4CI | ACNGT | 8 cut(s) | 118, 138, 184, 505, 785, 936, 1382, 1706 |
| Bst6I | CTCTTC | 5 cut(s) | 1005, 1187, 1560, 1577, 1643 |
| BstAFI | CTTAAG | 1 cut(s) | 1577 |
| BstC8I | GCNNGC | 2 cut(s) | 369, 891 |
| BstDEI | CTNAG | 7 cut(s) | 48, 165, 885, 1230, 1368, 1454, 1820 |
| BstDSI | CCRYGG | 1 cut(s) | 417 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1890 |
| BstF5I | GGATG | 4 cut(s) | 617, 1360, 1777, 1783 |
| BstFNI | CGCG | 1 cut(s) | 815 |
| BstMAI | GTCTC | 2 cut(s) | 16, 38 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 439, 665, 890 |
| BstNI | CCWGG | 1 cut(s) | 1887 |
| BstNSI | RCATGY | 1 cut(s) | 232 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 8 |
| BstSCI | CCNGG | 2 cut(s) | 754, 1885 |
| BstUI | CGCG | 1 cut(s) | 815 |
| BstV1I | GCAGC | 5 cut(s) | 469, 820, 1519, 1616, 1954 |
| BstV2I | GAAGAC | 3 cut(s) | 786, 1040, 1683 |
| BstX2I | RGATCY | 4 cut(s) | 328, 1371, 1823, 1835 |
| BstYI | RGATCY | 4 cut(s) | 328, 1371, 1823, 1835 |
| BstZ17I | GTATAC | 1 cut(s) | 1226 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1230 |
| BsuRI | GGCC | 1 cut(s) | 1867 |
| BtgI | CCRYGG | 1 cut(s) | 417 |
| BtgZI | GCGATG | 1 cut(s) | 1199 |
| BtrI | CACGTC | 1 cut(s) | 1973 |
| BtsCI | GGATG | 4 cut(s) | 617, 1360, 1777, 1783 |
| BtsI | GCAGTG | 1 cut(s) | 1068 |
| BtsIMutI | CAGTG | 2 cut(s) | 1068, 1863 |
| Cac8I | GCNNGC | 2 cut(s) | 369, 891 |
| Cfr13I | GGNCC | 1 cut(s) | 521 |
| CsiI | ACCWGGT | 1 cut(s) | 1885 |
| Csp6I | GTAC | 4 cut(s) | 457, 501, 1080, 1883 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1755, 1790 |
| CviAII | CATG | 6 cut(s) | 229, 338, 418, 443, 1178, 1874 |
| CviQI | GTAC | 4 cut(s) | 457, 501, 1080, 1883 |
| DdeI | CTNAG | 7 cut(s) | 48, 165, 885, 1230, 1368, 1454, 1820 |
| DraIII | CACNNNGTG | 2 cut(s) | 51, 1976 |
| Eam1104I | CTCTTC | 5 cut(s) | 1005, 1187, 1560, 1577, 1643 |
| EarI | CTCTTC | 5 cut(s) | 1005, 1187, 1560, 1577, 1643 |
| Eco130I | CCWWGG | 1 cut(s) | 417 |
| Eco31I | GGTCTC | 1 cut(s) | 38 |
| Eco32I | GATATC | 1 cut(s) | 148 |
| Eco47I | GGWCC | 1 cut(s) | 521 |
| Eco57I | CTGAAG | 2 cut(s) | 1008, 1110 |
| Eco81I | CCTNAGG | 1 cut(s) | 1230 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1890 |
| EcoRII | CCWGG | 1 cut(s) | 1885 |
| EcoRV | GATATC | 1 cut(s) | 148 |
| EcoT14I | CCWWGG | 1 cut(s) | 417 |
| ErhI | CCWWGG | 1 cut(s) | 417 |
| Esp3I | CGTCTC | 1 cut(s) | 16 |
| FaeI | CATG | 6 cut(s) | 232, 341, 421, 446, 1181, 1877 |
| FaqI | GGGAC | 1 cut(s) | 1973 |
| FatI | CATG | 6 cut(s) | 228, 337, 417, 442, 1177, 1873 |
| FauI | CCCGC | 1 cut(s) | 167 |
| FauNDI | CATATG | 1 cut(s) | 679 |
| FbaI | TGATCA | 1 cut(s) | 1159 |
| FblI | GTMKAC | 2 cut(s) | 1225, 1573 |
| Fnu4HI | GCNGC | 7 cut(s) | 170, 483, 834, 1131, 1533, 1605, 1968 |
| FokI | GGATG | 4 cut(s) | 624, 1367, 1784, 1790 |
| Fsp4HI | GCNGC | 7 cut(s) | 170, 483, 834, 1131, 1533, 1605, 1968 |
| FspBI | CTAG | 3 cut(s) | 525, 1311, 1722 |
| GluI | GCNGC | 7 cut(s) | 170, 483, 834, 1131, 1533, 1605, 1968 |
| GsaI | CCCAGC | 1 cut(s) | 1299 |
| HaeIII | GGCC | 1 cut(s) | 1867 |
| HapII | CCGG | 1 cut(s) | 755 |
| Hin1II | CATG | 6 cut(s) | 232, 341, 421, 446, 1181, 1877 |
| HindIII | AAGCTT | 1 cut(s) | 1551 |
| HinfI | GANTC | 5 cut(s) | 251, 449, 1195, 1406, 1904 |
| HpaII | CCGG | 1 cut(s) | 755 |
| HphI | GGTGA | 9 cut(s) | 103, 209, 458, 754, 802, 952, 1169, 1253, 1901 |
| Hpy166II | GTNNAC | 6 cut(s) | 190, 246, 501, 1226, 1574, 1641 |
| Hpy188I | TCNGA | 5 cut(s) | 830, 988, 1122, 1411, 1821 |
| Hpy8I | GTNNAC | 6 cut(s) | 190, 246, 501, 1226, 1574, 1641 |
| Hpy99I | CGWCG | 2 cut(s) | 290, 1977 |
| HpyAV | CCTTC | 9 cut(s) | 328, 582, 1088, 1261, 1345, 1453, 1487, 1507, 1886 |
| HpyCH4III | ACNGT | 8 cut(s) | 118, 138, 184, 505, 785, 936, 1382, 1706 |
| HpyCH4IV | ACGT | 2 cut(s) | 663, 1972 |
| HpyCH4V | TGCA | 9 cut(s) | 67, 210, 465, 563, 951, 1592, 1709, 1766, 1970 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 439, 665, 890 |
| HpyF3I | CTNAG | 7 cut(s) | 48, 165, 885, 1230, 1368, 1454, 1820 |
| HpySE526I | ACGT | 2 cut(s) | 663, 1972 |
| Hsp92II | CATG | 6 cut(s) | 232, 341, 421, 446, 1181, 1877 |
| Ksp22I | TGATCA | 1 cut(s) | 1159 |
| LguI | GCTCTTC | 1 cut(s) | 1577 |
| LmnI | GCTCC | 3 cut(s) | 1046, 1221, 1292 |
| Lsp1109I | GCAGC | 5 cut(s) | 469, 820, 1519, 1616, 1954 |
| LweI | GCATC | 5 cut(s) | 452, 816, 957, 1176, 1753 |
| MabI | ACCWGGT | 1 cut(s) | 1885 |
| MaeI | CTAG | 3 cut(s) | 525, 1311, 1722 |
| MaeII | ACGT | 2 cut(s) | 663, 1972 |
| MaeIII | GTNAC | 7 cut(s) | 43, 197, 649, 696, 872, 1376, 1757 |
| MflI | RGATCY | 4 cut(s) | 328, 1371, 1823, 1835 |
| MluCI | AATT | 7 cut(s) | 58, 100, 309, 774, 797, 1433, 1926 |
| MlyI | GAGTC | 1 cut(s) | 1204 |
| MroXI | GAANNNNTTC | 3 cut(s) | 330, 631, 1172 |
| MseI | TTAA | 7 cut(s) | 72, 261, 473, 1578, 1920, 1929, 2007 |
| MslI | CAYNNNNRTG | 1 cut(s) | 195 |
| MspA1I | CMGCKG | 2 cut(s) | 169, 1607 |
| MspCI | CTTAAG | 1 cut(s) | 1577 |
| MspI | CCGG | 1 cut(s) | 755 |
| MspR9I | CCNGG | 2 cut(s) | 756, 1887 |
| MvaI | CCWGG | 1 cut(s) | 1887 |
| MvnI | CGCG | 1 cut(s) | 815 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 439, 665, 890 |
| NciI | CCSGG | 1 cut(s) | 756 |
| NcoI | CCATGG | 1 cut(s) | 417 |
| NdeI | CATATG | 1 cut(s) | 679 |
| NlaIII | CATG | 6 cut(s) | 232, 341, 421, 446, 1181, 1877 |
| NlaIV | GGNNCC | 2 cut(s) | 1175, 1217 |
| NmuCI | GTSAC | 4 cut(s) | 43, 197, 696, 1376 |
| NspI | RCATGY | 1 cut(s) | 232 |
| OliI | CACNNNNGTG | 1 cut(s) | 195 |
| PciSI | GCTCTTC | 1 cut(s) | 1577 |
| PdmI | GAANNNNTTC | 3 cut(s) | 330, 631, 1172 |
| PfeI | GAWTC | 4 cut(s) | 251, 449, 1406, 1904 |
| PkrI | GCNGC | 7 cut(s) | 171, 484, 835, 1132, 1534, 1606, 1969 |
| PleI | GAGTC | 1 cut(s) | 1203 |
| PpsI | GAGTC | 1 cut(s) | 1203 |
| PshAI | GACNNNNGTC | 1 cut(s) | 8 |
| Psp6I | CCWGG | 1 cut(s) | 1885 |
| PspFI | CCCAGC | 1 cut(s) | 1295 |
| PspGI | CCWGG | 1 cut(s) | 1885 |
| PspN4I | GGNNCC | 2 cut(s) | 1175, 1217 |
| PspPI | GGNCC | 1 cut(s) | 521 |
| PsuI | RGATCY | 4 cut(s) | 328, 1371, 1823, 1835 |
| PvuII | CAGCTG | 1 cut(s) | 1607 |
| RsaI | GTAC | 4 cut(s) | 458, 502, 1081, 1884 |
| RsaNI | GTAC | 4 cut(s) | 457, 501, 1080, 1883 |
| RseI | CAYNNNNRTG | 1 cut(s) | 195 |
| SapI | GCTCTTC | 1 cut(s) | 1577 |
| SaqAI | TTAA | 7 cut(s) | 72, 261, 473, 1578, 1920, 1929, 2007 |
| SatI | GCNGC | 7 cut(s) | 170, 483, 834, 1131, 1533, 1605, 1968 |
| Sau96I | GGNCC | 1 cut(s) | 521 |
| ScaI | AGTACT | 1 cut(s) | 1081 |
| SchI | GAGTC | 1 cut(s) | 1204 |
| ScrFI | CCNGG | 2 cut(s) | 756, 1887 |
| SexAI | ACCWGGT | 1 cut(s) | 1885 |
| SfaNI | GCATC | 5 cut(s) | 452, 816, 957, 1176, 1753 |
| SinI | GGWCC | 1 cut(s) | 521 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 195 |
| SmlI | CTYRAG | 3 cut(s) | 302, 1427, 1577 |
| SmoI | CTYRAG | 3 cut(s) | 302, 1427, 1577 |
| Sse9I | AATT | 7 cut(s) | 58, 100, 309, 774, 797, 1433, 1926 |
| SsiI | CCGC | 5 cut(s) | 160, 169, 232, 813, 1130 |
| SspMI | CTAG | 3 cut(s) | 525, 1311, 1722 |
| StyD4I | CCNGG | 2 cut(s) | 754, 1885 |
| StyI | CCWWGG | 1 cut(s) | 417 |
| TaaI | ACNGT | 8 cut(s) | 118, 138, 184, 505, 785, 936, 1382, 1706 |
| TaiI | ACGT | 2 cut(s) | 666, 1975 |
| TaqI | TCGA | 4 cut(s) | 285, 575, 592, 1145 |
| TaqII | GACCGA | 1 cut(s) | 1277 |
| TasI | AATT | 7 cut(s) | 58, 100, 309, 774, 797, 1433, 1926 |
| TatI | WGTACW | 2 cut(s) | 500, 1079 |
| TauI | GCSGC | 2 cut(s) | 172, 1133 |
| TfiI | GAWTC | 4 cut(s) | 251, 449, 1406, 1904 |
| Tru1I | TTAA | 7 cut(s) | 72, 261, 473, 1578, 1920, 1929, 2007 |
| Tru9I | TTAA | 7 cut(s) | 72, 261, 473, 1578, 1920, 1929, 2007 |
| TscAI | CASTG | 2 cut(s) | 1068, 1863 |
| TseFI | GTSAC | 4 cut(s) | 43, 197, 696, 1376 |
| TseI | GCWGC | 5 cut(s) | 482, 833, 1532, 1604, 1967 |
| Tsp45I | GTSAC | 4 cut(s) | 43, 197, 696, 1376 |
| TspDTI | ATGAA | 9 cut(s) | 326, 339, 524, 656, 1031, 1038, 1046, 1154, 1296 |
| TspGWI | ACGGA | 3 cut(s) | 144, 206, 1677 |
| TspRI | CASTG | 2 cut(s) | 1068, 1863 |
| Vha464I | CTTAAG | 1 cut(s) | 1577 |
| VpaK11BI | GGWCC | 1 cut(s) | 521 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1890 |
| XapI | RAATTY | 1 cut(s) | 309 |
| XbaI | TCTAGA | 1 cut(s) | 1721 |
| XceI | RCATGY | 1 cut(s) | 232 |
| XmiI | GTMKAC | 2 cut(s) | 1225, 1573 |
| XmnI | GAANNNNTTC | 3 cut(s) | 330, 631, 1172 |
| XspI | CTAG | 3 cut(s) | 525, 1311, 1722 |
| ZrmI | AGTACT | 1 cut(s) | 1081 |