Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0001573

Physical Location & Seq

Genomic Coordinates Reverse (-)

56261837 .. 56265408

Gene Structure 3572 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG359900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2031 bp

ATGGTGCAATATAATTTCAAGAGGATGACTGTTGTTCCCAGCGGGAAGGACTTCATTGATATTATCCTTTCTCGCACCCAGCGGCAGACCCCAACTGTGGTCCACAAGGGTTATGCAATTAACCGCCTGCGTCAGTTCTATATGCGCAAAGTGAAATACACCCAAACAAATTTTCATGAGAAGCTCTCTACTATCATTGATGAATTTCCTAGGCTGGACGACATCCACCCTTTCTATGGCGATCTTCTGCATGTTCTCTACAACAAGGACCATTACAAGCTCGCACTGGGTCAAATCAATACTGCAAGGAACCTTATTTCCAAGATTGCTAAGGATTATGTCAAGTTATTGAAGTATGGTGATTCACTTTACCGATGCAAGAGTCTCAAGGTTGCTGCTCTTGGCCGTATGTGCACGGTTATAAAGAGGATTGGCCCTAGTTTGGCTTATCTAGAACAAATTAGGCAACACATGGCAAGGCTGCCTTCAATTGATCCAAACACCCGGACAATATTGATTTGCGGCTATCCCAATGTCGGAAAGAGTTCATTCATCAACAAGATCACCAGGGCAGATGTTGATGTCCAGCCCTATGCTTTTACTACCAAGTCTCTCTTTGTGGGGCATACTGATTATAAGTACCTGAGGTACCAGGTTATTGATACACCTGGGATTTTGGACCGACCATTTGAAGACCGTAACATTATTGAGATGTGCAGCATCACTGCATTGGCACATTTGAGAGCTGCTGTTTTGTTCTTCTTGGACATCTCAGGGTCTTGTGGTTATACCATTGCCCAACAAGCTGCTCTTTTTCACAGCATTAAGTCTCTGTTCATGAACAAACCATTGATTATAGTCTGCAACAAGACTGATTTGCAGCCATTGGAGGGCATATCTGAGGAAGACATGCAGTTGGTCACAGAGATGAAAGCTGAAGCTATGAAGACTGTGATTGGTCAGGGAGGCGAGGCTACTAATGATGATGGGGTACTCTTGACCATGAGCACTTTGACCGAGGAGGGGGTTATCTCTGTAAAGAATGCAGCTTGTGAGAGGTTATTGAATCAGAGAGTTGAGTTGAAGATGAAATCTAAAAAGATAAATGATTGTTTAAATCGTTTTCATGTTGCGATGCCAAAGCCACGTGACCAAAAGGAAAGGCCTCCATGTATACCTCAGGCTGTTTTAGAAGCCAAGGCTAAGCAAGCAGCAGAGAAGGAAAAGAGAACTACTGAAAAGGATTTGGAGAATGAAAATGGTGGTGCTGGTGTATACTCTGCCAGTTTGAAGAAGAATTATATCCTTGCTCATGATGAGTGGAAAGAGGATATTATGCCTGAAATTCTTGATGGCCACAATGTATTTGACTTTGTTGATCCTGATATTTTGAATAGGCTTGAGGAGTTAGAACGAGAAGAAGGAATCAGGCAGGCAGAGGAGGATGATGATGTGGAGATGGGTGGAATGGAGTTGACTCCAGAAGAGCAGAAGACATTGGCTCAGATAAGGAAAAAGAAAAGCTTGCTGATTCAACAACATAGAATCAAGAAAAGTACCGCAGAGAGTCGGCCTACAGTACCTAGGAAATTTGACAAGGACAGGGAGTTCACAACAAAGAGAATGGGGAGGCAGCTGTCAGAGTTGGGAATTGATCCTAGTAAGGCAATTGACCGAGCCCGCAGCAGATCTGTTTCTGCAAGGGGCCGAAAGAGAGAGAGATCAGTTGACAAGGGTGATACTGAAGGTGGTGGTGTCATGGATATGGATGTGGATACACCCAACAAGAAGCTGCGCTCGATGTCCAGACCCCGTTCAAGGTCAAGATCAAGGCCGCCTACTGATGTTGTCCCTGGTGATGGCTTTAAGGACTCTGATCAAAAGTCTAAAGCACTAGACAAGGCCCGGAAATCTGTGAAGAACAGAAACAAGAATGCTAGACGTGGGGAGGCAGATAGAGTTATTCCCAATTTGAAACCAAAGCATTTGTTCTCTGGAAAACGCTCCAATGGAAAGACCCAAAGGCGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0016020

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

MMR_HSR1 NOG1 NOGCT

Protein Analysis

676

Amino Acids

77.02

Weight (kDa)

9.55

Isoelectric Point (pI)

42.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NOG1_N	PF17835	6 - 165	7e-61	NOG1 N-terminal helical domain
FeoB_N	PF02421	170 - 319	1.9e-09	Ferrous iron transport protein B
MMR_HSR1	PF01926	171 - 290	3.1e-18	50S ribosome-binding GTPase
NOG1	PF06858	236 - 292	6.7e-25	Nucleolar GTP-binding protein 1 (NOG1)
NOGCT	PF08155	410 - 463	1.6e-26	NOGCT (NUC087) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10300 AT1G10300 AT1G10300 AT1G50920
fragaria_vesca	FvH4_3g28930 FvH4_3g28930 FvH4_6g37740
malus_domestica	MD06G1031200.v1.1 MD11G1222700.v1.1 MD16G1277600.v1.1
prunus_persica	Prupe.1G572400_v2.0.a1 Prupe.1G572400_v2.0.a1 Prupe.1G572400_v2.0.a1 Prupe.4G247400_v2.0.a1 Prupe.5G045700_v2.0.a1 Prupe.5G046000_v2.0.a1 Prupe.5G046000_v2.0.a1 Prupe.6G149400_v2.0.a1
pyrus_communis	pycom03g13360 pycom06g02600 pycom11g16960 pycom11g19650
rosa_chinensis	RchiOBHm_Chr3g0491451 RchiOBHm_Chr5g0051831 RchiOBHm_Chr5g0051911
rosa_laevigata	RLG00000034859 RLG00000034861
rosa_multiflora	Rmu_co8440613.1_g000002 Rmu_sc0001267.1_g000040
rosa_roxburghii	Rroxscaffold_1G00027370 Rroxscaffold_1G00027400
rosa_rugosa	Rorug03G0248800 Rorug03G0248800 Rorug03G0249700 Rorug05G0276600 Rorug05G0276700 Rorug05G0276800
rosa_samantha	Rh3AG298700 Rh3DG332500 Rh3DG333200 Rh5AG348600 Rh5AG348900 Rh5BG359100 Rh5BG359200 Rh5BG359900 Rh5CG384700 Rh5CG384900 Rh5DG374600
rosa_wichuraiana	Rw3G026370 Rw5G032900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	422, 636
Acc16I	TGCGCA	1 cut(s)	146
Acc65I	GGTACC	1 cut(s)	648
AccB1I	GGYRCC	1 cut(s)	648
AccI	GTMKAC	2 cut(s)	1174, 1275
AciI	CCGC	7 cut(s)	42, 82, 124, 522, 1560, 1681, 1835
AclWI	GGATC	3 cut(s)	488, 1373, 1649
AcoI	YGGCCR	2 cut(s)	403, 1354
AcsI	RAATTY	4 cut(s)	169, 203, 1344, 1589
AcuI	CTGAAG	2 cut(s)	957, 1764
AcvI	CACGTG	1 cut(s)	1148
AfaI	GTAC	5 cut(s)	641, 650, 993, 1558, 1581
AfiI	CCNNNNNNNGG	8 cut(s)	97, 236, 442, 536, 890, 1023, 1818, 1859
AjiI	CACGTC	1 cut(s)	1943
AjnI	CCWGG	4 cut(s)	566, 651, 667, 1852
AjuI	GAANNNNNNNTTGG	2 cut(s)	156, 188
AloI	GAACNNNNNNTCC	4 cut(s)	302, 334, 1592, 1624
Alw21I	GWGCWC	2 cut(s)	416, 1010
Alw26I	GTCTC	3 cut(s)	389, 615, 834
Alw44I	GTGCAC	1 cut(s)	412
AlwI	GGATC	3 cut(s)	488, 1373, 1649
AoxI	GGCC	8 cut(s)	403, 433, 1163, 1354, 1571, 1705, 1832, 1902
ApaLI	GTGCAC	1 cut(s)	412
ApoI	RAATTY	4 cut(s)	169, 203, 1344, 1589
ArsI	GACNNNNNNTTYG	2 cut(s)	671, 703
Asp700I	GAANNNNTTC	2 cut(s)	50, 544
Asp718I	GGTACC	1 cut(s)	648
AspA2I	CCTAGG	2 cut(s)	209, 1583
AspLEI	GCGC	3 cut(s)	147, 1797, 2028
AspS9I	GGNCC	6 cut(s)	100, 268, 434, 679, 1705, 1903
AsuC2I	CCSGG	2 cut(s)	505, 1906
AsuHPI	GGTGA	4 cut(s)	371, 556, 1748, 1868
AvaII	GGWCC	3 cut(s)	100, 268, 679
AvrII	CCTAGG	2 cut(s)	209, 1583
AxyI	CCTNAGG	2 cut(s)	644, 1179
BaeGI	GKGCMC	1 cut(s)	416
BalI	TGGCCA	1 cut(s)	1356
BanI	GGYRCC	1 cut(s)	648
BanII	GRGCYC	1 cut(s)	1681
BbrPI	CACGTG	1 cut(s)	1148
BbsI	GAAGAC	4 cut(s)	699, 912, 953, 1499
Bbv12I	GWGCWC	2 cut(s)	416, 1010
BccI	CCATC	4 cut(s)	980, 1346, 1453, 1853
BceAI	ACGGC	1 cut(s)	390
BciT130I	CCWGG	4 cut(s)	568, 653, 669, 1854
BciVI	GTATCC	1 cut(s)	1768
BclI	TGATCA	1 cut(s)	1876
BcnI	CCSGG	2 cut(s)	505, 1906
BcoDI	GTCTC	3 cut(s)	389, 615, 834
BfaI	CTAG	7 cut(s)	210, 438, 452, 1584, 1659, 1895, 1938
BfmI	CTRYAG	1 cut(s)	1575
BfoI	RGCGCY	1 cut(s)	2029
BfuI	GTATCC	1 cut(s)	1768
BglII	AGATCT	1 cut(s)	1688
BlnI	CCTAGG	2 cut(s)	209, 1583
BlpI	GCTNAGC	1 cut(s)	1203
Bme1390I	CCNGG	6 cut(s)	505, 568, 653, 669, 1854, 1906
Bme18I	GGWCC	3 cut(s)	100, 268, 679
BmgBI	CACGTC	1 cut(s)	1943
BmgT120I	GGNCC	6 cut(s)	100, 268, 434, 679, 1705, 1903
BmiI	GGNNCC	3 cut(s)	311, 650, 1706
BmrFI	CCNGG	6 cut(s)	505, 568, 653, 669, 1854, 1906
BmrI	ACTGGG	1 cut(s)	296
BmsI	GCATC	3 cut(s)	365, 729, 1125
BmuI	ACTGGG	1 cut(s)	296
BpiI	GAAGAC	4 cut(s)	699, 912, 953, 1499
BplI	GAGNNNNNCTC	2 cut(s)	170, 202
BpmI	CTGGAG	1 cut(s)	1464
Bpu10I	CCTNAGC	1 cut(s)	330
Bpu1102I	GCTNAGC	1 cut(s)	1203
BpuEI	CTTGAG	2 cut(s)	371, 1421
BpuMI	CCSGG	2 cut(s)	505, 1906
BsaAI	YACGTR	1 cut(s)	1148
BsaJI	CCNNGG	7 cut(s)	209, 567, 668, 1017, 1197, 1583, 1852
Bsc4I	CCNNNNNNNGG	8 cut(s)	97, 236, 442, 536, 890, 1023, 1818, 1859
Bse1I	ACTGG	2 cut(s)	291, 1284
Bse21I	CCTNAGG	2 cut(s)	644, 1179
Bse3DI	GCAATG	1 cut(s)	792
BseBI	CCWGG	4 cut(s)	568, 653, 669, 1854
BseDI	CCNNGG	7 cut(s)	209, 567, 668, 1017, 1197, 1583, 1852
BseGI	GGATG	4 cut(s)	30, 222, 1450, 1774
BseLI	CCNNNNNNNGG	8 cut(s)	97, 236, 442, 536, 890, 1023, 1818, 1859
BseMI	GCAATG	1 cut(s)	792
BseMII	CTCAG	5 cut(s)	635, 786, 891, 1193, 1517
BseNI	ACTGG	2 cut(s)	291, 1284
BseRI	GAGGAG	3 cut(s)	1034, 1418, 1454
BseSI	GKGCMC	1 cut(s)	416
BseYI	CCCAGC	2 cut(s)	38, 78
BsgI	GTGCAG	1 cut(s)	736
BshFI	GGCC	8 cut(s)	405, 435, 1165, 1356, 1573, 1707, 1834, 1904
BshNI	GGYRCC	1 cut(s)	648
BsiHKAI	GWGCWC	2 cut(s)	416, 1010
BsiSI	CCGG	2 cut(s)	505, 1906
BslFI	GGGAC	1 cut(s)	1835
BslI	CCNNNNNNNGG	8 cut(s)	97, 236, 442, 536, 890, 1023, 1818, 1859
BsmAI	GTCTC	3 cut(s)	389, 615, 834
BsmFI	GGGAC	1 cut(s)	1835
BsmI	GAATGC	2 cut(s)	1048, 1939
BsnI	GGCC	8 cut(s)	405, 435, 1165, 1356, 1573, 1707, 1834, 1904
Bsp1286I	GDGCHC	3 cut(s)	416, 1010, 1681
Bsp143I	GATC	9 cut(s)	241, 493, 561, 1378, 1654, 1688, 1721, 1826, 1876
Bsp1720I	GCTNAGC	1 cut(s)	1203
BspACI	CCGC	7 cut(s)	42, 82, 124, 522, 1560, 1681, 1835
BspANI	GGCC	8 cut(s)	405, 435, 1165, 1356, 1573, 1707, 1834, 1904
BspCNI	CTCAG	5 cut(s)	636, 785, 892, 1192, 1516
BspHI	TCATGA	3 cut(s)	175, 837, 1312
BspLI	GGNNCC	3 cut(s)	311, 650, 1706
BspPI	GGATC	3 cut(s)	488, 1373, 1649
BspQI	GCTCTTC	1 cut(s)	1479
BspT107I	GGYRCC	1 cut(s)	648
BsrDI	GCAATG	1 cut(s)	792
BsrI	ACTGG	2 cut(s)	291, 1284
BssECI	CCNNGG	7 cut(s)	209, 567, 668, 1017, 1197, 1583, 1852
BssMI	GATC	9 cut(s)	241, 493, 561, 1378, 1654, 1688, 1721, 1826, 1876
BssNAI	GTATAC	2 cut(s)	1175, 1276
BssT1I	CCWWGG	3 cut(s)	209, 1197, 1583
Bst1107I	GTATAC	2 cut(s)	1175, 1276
Bst2UI	CCWGG	4 cut(s)	568, 653, 669, 1854
Bst4CI	ACNGT	6 cut(s)	31, 97, 418, 698, 952, 1579
Bst6I	CTCTTC	1 cut(s)	1479
BstBAI	YACGTR	1 cut(s)	1148
BstC8I	GCNNGC	6 cut(s)	128, 282, 1209, 1434, 1526, 1681
BstDEI	CTNAG	7 cut(s)	330, 644, 772, 900, 1179, 1203, 1503
BstF5I	GGATG	4 cut(s)	30, 222, 1450, 1774
BstH2I	RGCGCY	1 cut(s)	2029
BstHHI	GCGC	3 cut(s)	147, 1797, 2028
BstKTI	GATC	9 cut(s)	244, 496, 564, 1381, 1657, 1691, 1724, 1829, 1879
BstMAI	GTCTC	3 cut(s)	389, 615, 834
BstMBI	GATC	9 cut(s)	241, 493, 561, 1378, 1654, 1688, 1721, 1826, 1876
BstMWI	GCNNNNNNNGC	3 cut(s)	411, 803, 1208
BstNI	CCWGG	4 cut(s)	568, 653, 669, 1854
BstNSI	RCATGY	2 cut(s)	254, 913
BstSCI	CCNGG	6 cut(s)	503, 566, 651, 667, 1852, 1904
BstSFI	CTRYAG	1 cut(s)	1575
BstSLI	GKGCMC	1 cut(s)	416
BstV2I	GAAGAC	4 cut(s)	699, 912, 953, 1499
BstX2I	RGATCY	1 cut(s)	1688
BstYI	RGATCY	1 cut(s)	1688
BstZ17I	GTATAC	2 cut(s)	1175, 1276
Bsu36I	CCTNAGG	2 cut(s)	644, 1179
BsuI	GTATCC	1 cut(s)	1768
BsuRI	GGCC	8 cut(s)	405, 435, 1165, 1356, 1573, 1707, 1834, 1904
BtgZI	GCGATG	1 cut(s)	1148
BtrI	CACGTC	1 cut(s)	1943
BtsCI	GGATG	4 cut(s)	30, 222, 1450, 1774
BtsI	GCAGTG	1 cut(s)	723
BtsIMutI	CAGTG	2 cut(s)	284, 723
Cac8I	GCNNGC	6 cut(s)	128, 282, 1209, 1434, 1526, 1681
CciI	TCATGA	3 cut(s)	175, 837, 1312
CfoI	GCGC	3 cut(s)	147, 1797, 2028
Cfr13I	GGNCC	6 cut(s)	100, 268, 434, 679, 1705, 1903
CseI	GACGC	1 cut(s)	119
CsiI	ACCWGGT	1 cut(s)	651
Csp6I	GTAC	5 cut(s)	640, 649, 992, 1557, 1580
CviQI	GTAC	5 cut(s)	640, 649, 992, 1557, 1580
DdeI	CTNAG	7 cut(s)	330, 644, 772, 900, 1179, 1203, 1503
DpnI	GATC	9 cut(s)	243, 495, 563, 1380, 1656, 1690, 1723, 1828, 1878
DpnII	GATC	9 cut(s)	241, 493, 561, 1378, 1654, 1688, 1721, 1826, 1876
DraI	TTTAAA	1 cut(s)	1116
EaeI	YGGCCR	2 cut(s)	403, 1354
Eam1104I	CTCTTC	1 cut(s)	1479
EarI	CTCTTC	1 cut(s)	1479
Eco130I	CCWWGG	3 cut(s)	209, 1197, 1583
Eco147I	AGGCCT	1 cut(s)	1165
Eco24I	GRGCYC	1 cut(s)	1681
Eco47I	GGWCC	3 cut(s)	100, 268, 679
Eco57I	CTGAAG	2 cut(s)	957, 1764
Eco72I	CACGTG	1 cut(s)	1148
Eco81I	CCTNAGG	2 cut(s)	644, 1179
EcoRII	CCWGG	4 cut(s)	566, 651, 667, 1852
EcoT14I	CCWWGG	3 cut(s)	209, 1197, 1583
EcoT38I	GRGCYC	1 cut(s)	1681
ErhI	CCWWGG	3 cut(s)	209, 1197, 1583
FalI	AAGNNNNNCTT	8 cut(s)	469, 501, 599, 631, 795, 827, 1508, 1540
FaqI	GGGAC	1 cut(s)	1835
FauI	CCCGC	2 cut(s)	35, 1688
FbaI	TGATCA	1 cut(s)	1876
FblI	GTMKAC	2 cut(s)	1174, 1275
FokI	GGATG	4 cut(s)	37, 209, 1457, 1781
FriOI	GRGCYC	1 cut(s)	1681
FspBI	CTAG	7 cut(s)	210, 438, 452, 1584, 1659, 1895, 1938
FspI	TGCGCA	1 cut(s)	146
GlaI	GCGC	3 cut(s)	146, 1796, 2027
GsaI	CCCAGC	2 cut(s)	42, 82
GsuI	CTGGAG	1 cut(s)	1464
HaeII	RGCGCY	1 cut(s)	2029
HaeIII	GGCC	8 cut(s)	405, 435, 1165, 1356, 1573, 1707, 1834, 1904
HapII	CCGG	2 cut(s)	505, 1906
HgaI	GACGC	1 cut(s)	119
HhaI	GCGC	3 cut(s)	147, 1797, 2028
Hin6I	GCGC	3 cut(s)	145, 1795, 2026
HinP1I	GCGC	3 cut(s)	145, 1795, 2026
HincII	GTYRAC	2 cut(s)	1476, 1729
HindII	GTYRAC	2 cut(s)	1476, 1729
HindIII	AAGCTT	1 cut(s)	1522
HinfI	GANTC	9 cut(s)	362, 382, 1066, 1425, 1477, 1531, 1545, 1567, 1871
HpaII	CCGG	2 cut(s)	505, 1906
HphI	GGTGA	4 cut(s)	371, 556, 1748, 1868
Hpy166II	GTNNAC	7 cut(s)	103, 414, 1175, 1276, 1476, 1611, 1729
Hpy188I	TCNGA	6 cut(s)	539, 901, 1071, 1506, 1642, 1876
Hpy8I	GTNNAC	7 cut(s)	103, 414, 1175, 1276, 1476, 1611, 1729
HpyAV	CCTTC	5 cut(s)	40, 495, 1213, 1415, 1739
HpyCH4III	ACNGT	6 cut(s)	31, 97, 418, 698, 952, 1579
HpyCH4IV	ACGT	2 cut(s)	1147, 1942
HpyF10VI	GCNNNNNNNGC	3 cut(s)	411, 803, 1208
HpyF3I	CTNAG	7 cut(s)	330, 644, 772, 900, 1179, 1203, 1503
HpySE526I	ACGT	2 cut(s)	1147, 1942
HspAI	GCGC	3 cut(s)	145, 1795, 2026
KpnI	GGTACC	1 cut(s)	652
Ksp22I	TGATCA	1 cut(s)	1876
Kzo9I	GATC	9 cut(s)	241, 493, 561, 1378, 1654, 1688, 1721, 1826, 1876
LguI	GCTCTTC	1 cut(s)	1479
LmnI	GCTCC	1 cut(s)	2009
LweI	GCATC	3 cut(s)	365, 729, 1125
MabI	ACCWGGT	1 cut(s)	651
MaeI	CTAG	7 cut(s)	210, 438, 452, 1584, 1659, 1895, 1938
MaeII	ACGT	2 cut(s)	1147, 1942
MaeIII	GTNAC	3 cut(s)	698, 919, 1148
MalI	GATC	9 cut(s)	243, 495, 563, 1380, 1656, 1690, 1723, 1828, 1878
MboI	GATC	9 cut(s)	241, 493, 561, 1378, 1654, 1688, 1721, 1826, 1876
MfeI	CAATTG	2 cut(s)	489, 1668
MflI	RGATCY	1 cut(s)	1688
MhlI	GDGCHC	3 cut(s)	416, 1010, 1681
MlsI	TGGCCA	1 cut(s)	1356
MluNI	TGGCCA	1 cut(s)	1356
MlyI	GAGTC	4 cut(s)	391, 1471, 1576, 1865
MmeI	TCCRAC	1 cut(s)	517
Mox20I	TGGCCA	1 cut(s)	1356
MroXI	GAANNNNTTC	2 cut(s)	50, 544
MscI	TGGCCA	1 cut(s)	1356
MseI	TTAA	4 cut(s)	120, 825, 1115, 1866
MslI	CAYNNNNRTG	2 cut(s)	926, 1763
Msp20I	TGGCCA	1 cut(s)	1356
MspA1I	CMGCKG	3 cut(s)	42, 82, 1636
MspI	CCGG	2 cut(s)	505, 1906
MspR9I	CCNGG	6 cut(s)	505, 568, 653, 669, 1854, 1906
MunI	CAATTG	2 cut(s)	489, 1668
Mva1269I	GAATGC	2 cut(s)	1048, 1939
MvaI	CCWGG	4 cut(s)	568, 653, 669, 1854
MwoI	GCNNNNNNNGC	3 cut(s)	411, 803, 1208
NciI	CCSGG	2 cut(s)	505, 1906
NdeII	GATC	9 cut(s)	241, 493, 561, 1378, 1654, 1688, 1721, 1826, 1876
NlaIV	GGNNCC	3 cut(s)	311, 650, 1706
NmuCI	GTSAC	2 cut(s)	919, 1148
NsbI	TGCGCA	1 cut(s)	146
NspI	RCATGY	2 cut(s)	254, 913
PagI	TCATGA	3 cut(s)	175, 837, 1312
PceI	AGGCCT	1 cut(s)	1165
PciSI	GCTCTTC	1 cut(s)	1479
PctI	GAATGC	2 cut(s)	1048, 1939
PdmI	GAANNNNTTC	2 cut(s)	50, 544
PfeI	GAWTC	5 cut(s)	362, 1066, 1425, 1531, 1545
PleI	GAGTC	4 cut(s)	390, 1471, 1575, 1865
PmaCI	CACGTG	1 cut(s)	1148
PmlI	CACGTG	1 cut(s)	1148
PpsI	GAGTC	4 cut(s)	390, 1471, 1575, 1865
Ppu21I	YACGTR	1 cut(s)	1148
PsiI	TTATAA	2 cut(s)	422, 636
Psp6I	CCWGG	4 cut(s)	566, 651, 667, 1852
PspCI	CACGTG	1 cut(s)	1148
PspFI	CCCAGC	2 cut(s)	38, 78
PspGI	CCWGG	4 cut(s)	566, 651, 667, 1852
PspN4I	GGNNCC	3 cut(s)	311, 650, 1706
PspPI	GGNCC	6 cut(s)	100, 268, 434, 679, 1705, 1903
PsuI	RGATCY	1 cut(s)	1688
PvuII	CAGCTG	1 cut(s)	1636
RsaI	GTAC	5 cut(s)	641, 650, 993, 1558, 1581
RsaNI	GTAC	5 cut(s)	640, 649, 992, 1557, 1580
RseI	CAYNNNNRTG	2 cut(s)	926, 1763
SapI	GCTCTTC	1 cut(s)	1479
SaqAI	TTAA	4 cut(s)	120, 825, 1115, 1866
Sau3AI	GATC	9 cut(s)	241, 493, 561, 1378, 1654, 1688, 1721, 1826, 1876
Sau96I	GGNCC	6 cut(s)	100, 268, 434, 679, 1705, 1903
SchI	GAGTC	4 cut(s)	391, 1471, 1576, 1865
ScrFI	CCNGG	6 cut(s)	505, 568, 653, 669, 1854, 1906
SduI	GDGCHC	3 cut(s)	416, 1010, 1681
SexAI	ACCWGGT	1 cut(s)	651
SfaNI	GCATC	3 cut(s)	365, 729, 1125
SfcI	CTRYAG	1 cut(s)	1575
SinI	GGWCC	3 cut(s)	100, 268, 679
SmiMI	CAYNNNNRTG	2 cut(s)	926, 1763
SmlI	CTYRAG	2 cut(s)	386, 1400
SmoI	CTYRAG	2 cut(s)	386, 1400
SseBI	AGGCCT	1 cut(s)	1165
SsiI	CCGC	7 cut(s)	42, 82, 124, 522, 1560, 1681, 1835
SspI	AATATT	1 cut(s)	513
SspMI	CTAG	7 cut(s)	210, 438, 452, 1584, 1659, 1895, 1938
StuI	AGGCCT	1 cut(s)	1165
StyD4I	CCNGG	6 cut(s)	503, 566, 651, 667, 1852, 1904
StyI	CCWWGG	3 cut(s)	209, 1197, 1583
TaaI	ACNGT	6 cut(s)	31, 97, 418, 698, 952, 1579
TaiI	ACGT	2 cut(s)	1150, 1945
TaqI	TCGA	1 cut(s)	1799
TaqII	GACCGA	3 cut(s)	696, 1031, 1689
TauI	GCSGC	3 cut(s)	85, 525, 1837
TfiI	GAWTC	5 cut(s)	362, 1066, 1425, 1531, 1545
Tru1I	TTAA	4 cut(s)	120, 825, 1115, 1866
Tru9I	TTAA	4 cut(s)	120, 825, 1115, 1866
TscAI	CASTG	2 cut(s)	291, 730
TseFI	GTSAC	2 cut(s)	919, 1148
Tsp45I	GTSAC	2 cut(s)	919, 1148
TspRI	CASTG	2 cut(s)	291, 730
VneI	GTGCAC	1 cut(s)	412
VpaK11BI	GGWCC	3 cut(s)	100, 268, 679
XapI	RAATTY	4 cut(s)	169, 203, 1344, 1589
XbaI	TCTAGA	1 cut(s)	451
XceI	RCATGY	2 cut(s)	254, 913
XcmI	CCANNNNNNNNNTGG	1 cut(s)	233
XmaJI	CCTAGG	2 cut(s)	209, 1583
XmiI	GTMKAC	2 cut(s)	1174, 1275
XmnI	GAANNNNTTC	2 cut(s)	50, 544
XspI	CTAG	7 cut(s)	210, 438, 452, 1584, 1659, 1895, 1938

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.