Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0001573

Physical Location & Seq

Genomic Coordinates Reverse (-)

3753619 .. 3757230

Gene Structure 3612 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1031200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

ATGACTGTTGTACCCAATGGGAAGGACTTCGTTGACATTATCCTGTCTCGCACTCAGAGGCAGACCCCAACTGTAGTCCACAAGGGTTATGCCATTTCCCGCCTTCGTCAGTTCTATATGCGCAAAGTCAAATATACCCAACAGAATTTTCATGAAAAGCTCTCCACAATCATCGATGAGTTTCCTAGGCTGGATGATATCCACCCTTTCTATGGTGATCTTCTTCATGTTCTCTACAACAAAGACCACTACAAGCTTGCGCTTGGCCAAATCAATACTGCAAGTAAAAATATTGGAAATATTTCTAAAGATTTTGTGAAATTGTTGAAGTATGGTGTTTCACTTTACCGATGCAAATGTCTCAAGGTCGCTGCTCTTGGCCGCATGTGCACGGTTATAAAGAGGATTGGTCCTAGTTTAGCTTACCTGGAACAAATTAGGCAACACATGGCAAGGCTACCTTCAATTGACCCTAATACCAGGACAGTATTGATTTGTGGTTATCCAAATGTCGGAAAGAGTTCATTCATTAACAAGATCACAAGGGCTGATGTGGATGTCCAACCCTATGCTTTTACGACCAAGTCACTCTTTGTGGGACACACAGATTATAAATACCTGAGGTACCAGGTAATTGATACACCAGGGATCTTGGACCGACCGTTTGAAGACCGTAACATTATTGAGATGTGCAGCATCACAGCTTTGGCCCACTTGAGAGCTGCGGTGTTGTTCTTCTTGGACATCTCAGGATCTTGTGGGTACAGCATTGCCCAACAAGCAGCTCTTTTTCACAGCATCAAGTCTCTGTTTATGAACAAACCATTGATTATAGTCTGCAACAAGACTGATTTGCAGTCATTGGATGGTATATCCGAGGAAGACAAGAGGTTGGTCACGGAGATGAAATCTGAAGCTATGAAGACAGTGATCGGTCAGGGAGGTGAGGCTACAAATGATGCGGGGGTACTCTTGCCCATGAGCACTTTGACCGAGGAGGGGGTAATTGCTGTAAAGAATGCAGCTTGTGAGAGGTTGTTGAATCAGAGAGTTGAACTGAAGATGAAATCCAAAAAGATAAATGACTGCTTAAATCGTTTTCACATTGCCATGCCAAAGCCTCGTGACAACAAGGAAAGGCCCCCATGCATACCTCAAGCAGTTATAGAAGCTAAGACTAAGCAAGCAACGGAGAAGGAAGAGAGGCATACAGAAAGGGATTTGGAGAATGAGAATGGCGGTGCAGGTGTATACTCTGCCAGTTTGAAGAAGCATTATATCTTAGCTAATGATGAATGGAAAGAGGATGTCGTGCCGGAAATTTATGATGGGCACAATGTGTGTGACTTTGTTGATCCTGATATTTTGCATAGGCTTGAGGAGTTGGAACGAGAAGGACTCCATCATGAAGAGGAGGGTGATGATTTTGAGATGGATGGATTCCAATTGACTCCAGAAGAGCAAAAGACATTGGCTGCGATAAGGAAAAAGAAAAGCTTGCGCTATTCACAACATAGAATGAAGAAAAGCACAGCAGAGAGTCGACCCATTGTACCAAGGAAATTTGACAAGGATAGGGAGTTCACAACAAAGAGAATGAGGAGGCAGCTTTCAAAATTGGGTATTGATCCTACTAGGGCAATTGAACGGGCTCGAAGCAGATCTGTCTCTAGGGGACGGAAGAGGGAGAGATCAGTTGACAGGGGTGATGCTGATGGTGGCGATGATATAGATGTGGATACACCCAACAAGAAGCAGCGTATGTTATCTAGATCTCGTCCAAGGTCTAGATCAAGGCCTCCGATTGAAGTTGTCCCTGGAGAGGGCTTCAAGGACTCTAATCAGAAAGCGAAGGCACTACAGAAGGCCAGGAAATCTAATAAGAATAGAAACAAGGATGCTCGTCGTGGAGAGGCAGATAGGGTCATTCCCACTTTAAAACCAAAGCACTTGTTATCTGGAAAACGCTCAATTGGAAAGACCCAAAGGCGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0016020

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

MMR_HSR1 NOG1 NOGCT

Protein Analysis

665

Amino Acids

75.83

Weight (kDa)

9.6

Isoelectric Point (pI)

48.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NOG1_N	PF17835	1 - 157	4e-57	NOG1 N-terminal helical domain
FeoB_N	PF02421	162 - 311	6.7e-10	Ferrous iron transport protein B
MMR_HSR1	PF01926	163 - 282	3e-18	50S ribosome-binding GTPase
NOG1	PF06858	228 - 284	3.9e-25	Nucleolar GTP-binding protein 1 (NOG1)
NOGCT	PF08155	402 - 455	1.8e-27	NOGCT (NUC087) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10300 AT1G10300 AT1G10300 AT1G50920
fragaria_vesca	FvH4_3g28930 FvH4_3g28930 FvH4_6g37740
malus_domestica	MD06G1031200.v1.1 MD11G1222700.v1.1 MD16G1277600.v1.1
prunus_persica	Prupe.1G572400_v2.0.a1 Prupe.1G572400_v2.0.a1 Prupe.1G572400_v2.0.a1 Prupe.4G247400_v2.0.a1 Prupe.5G045700_v2.0.a1 Prupe.5G046000_v2.0.a1 Prupe.5G046000_v2.0.a1 Prupe.6G149400_v2.0.a1
pyrus_communis	pycom03g13360 pycom06g02600 pycom11g16960 pycom11g19650
rosa_chinensis	RchiOBHm_Chr3g0491451 RchiOBHm_Chr5g0051831 RchiOBHm_Chr5g0051911
rosa_laevigata	RLG00000034859 RLG00000034861
rosa_multiflora	Rmu_co8440613.1_g000002 Rmu_sc0001267.1_g000040
rosa_roxburghii	Rroxscaffold_1G00027370 Rroxscaffold_1G00027400
rosa_rugosa	Rorug03G0248800 Rorug03G0248800 Rorug03G0249700 Rorug05G0276600 Rorug05G0276700 Rorug05G0276800
rosa_samantha	Rh3AG298700 Rh3DG332500 Rh3DG333200 Rh5AG348600 Rh5AG348900 Rh5BG359100 Rh5BG359200 Rh5BG359900 Rh5CG384700 Rh5CG384900 Rh5DG374600
rosa_wichuraiana	Rw3G026370 Rw5G032900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	398, 612
AarI	CACCTGC	1 cut(s)	1235
Acc16I	TGCGCA	1 cut(s)	122
Acc36I	ACCTGC	1 cut(s)	1235
Acc65I	GGTACC	1 cut(s)	624
AccB1I	GGYRCC	1 cut(s)	624
AccI	GTMKAC	2 cut(s)	1251, 1543
AciI	CCGC	5 cut(s)	100, 382, 725, 962, 1239
AclWI	GGATC	4 cut(s)	656, 760, 1349, 1622
AcoI	YGGCCR	2 cut(s)	265, 379
AcsI	RAATTY	3 cut(s)	145, 1320, 1562
AcuI	CTGAAG	2 cut(s)	933, 1079
AdeI	CACNNNGTG	1 cut(s)	1339
AfaI	GTAC	5 cut(s)	12, 626, 764, 969, 1554
AfiI	CCNNNNNNNGG	5 cut(s)	212, 512, 999, 1822, 1823
AjnI	CCWGG	6 cut(s)	426, 479, 627, 643, 1816, 1868
AjuI	GAANNNNNNNTTGG	2 cut(s)	132, 164
AloI	GAACNNNNNNTCC	2 cut(s)	1565, 1597
Alw21I	GWGCWC	2 cut(s)	392, 986
Alw26I	GTCTC	4 cut(s)	51, 365, 810, 1672
Alw44I	GTGCAC	1 cut(s)	388
AlwI	GGATC	4 cut(s)	656, 760, 1349, 1622
AoxI	GGCC	6 cut(s)	265, 379, 708, 1139, 1796, 1866
ApaLI	GTGCAC	1 cut(s)	388
ApeKI	GCWGC	8 cut(s)	371, 693, 722, 782, 1022, 1475, 1606, 1756
ApoI	RAATTY	3 cut(s)	145, 1320, 1562
ArsI	GACNNNNNNTTYG	2 cut(s)	647, 679
Asp700I	GAANNNNTTC	3 cut(s)	26, 301, 520
Asp718I	GGTACC	1 cut(s)	624
AspA2I	CCTAGG	1 cut(s)	185
AspLEI	GCGC	4 cut(s)	123, 262, 1503, 1992
AspS9I	GGNCC	4 cut(s)	410, 655, 709, 1140
AsuHPI	GGTGA	4 cut(s)	227, 956, 1430, 1718
AvaII	GGWCC	2 cut(s)	410, 655
AvrII	CCTAGG	1 cut(s)	185
AxyI	CCTNAGG	1 cut(s)	620
BaeGI	GKGCMC	2 cut(s)	392, 1335
BaeI	ACNNNNGTAYC	1 cut(s)	27
BalI	TGGCCA	1 cut(s)	267
BanI	GGYRCC	1 cut(s)	624
BanII	GRGCYC	1 cut(s)	1654
BauI	CACGAG	1 cut(s)	1122
BbsI	GAAGAC	3 cut(s)	675, 888, 929
Bbv12I	GWGCWC	2 cut(s)	392, 986
BbvI	GCAGC	8 cut(s)	358, 705, 709, 794, 1034, 1462, 1618, 1768
BccI	CCATC	6 cut(s)	860, 1322, 1410, 1426, 1430, 1709
BciT130I	CCWGG	6 cut(s)	428, 481, 629, 645, 1818, 1870
BciVI	GTATCC	1 cut(s)	1732
BcoDI	GTCTC	4 cut(s)	51, 365, 810, 1672
BfaI	CTAG	7 cut(s)	186, 414, 1635, 1671, 1770, 1788, 1993
BfmI	CTRYAG	2 cut(s)	72, 1859
BfoI	RGCGCY	1 cut(s)	1993
BfuAI	ACCTGC	1 cut(s)	1235
BfuI	GTATCC	1 cut(s)	1732
BglII	AGATCT	2 cut(s)	1661, 1772
BisI	GCNGC	9 cut(s)	372, 382, 694, 723, 783, 1023, 1476, 1607, 1757
BlnI	CCTAGG	1 cut(s)	185
BlsI	GCNGC	9 cut(s)	373, 383, 695, 724, 784, 1024, 1477, 1608, 1758
Bme1390I	CCNGG	6 cut(s)	428, 481, 629, 645, 1818, 1870
Bme18I	GGWCC	2 cut(s)	410, 655
BmgT120I	GGNCC	4 cut(s)	410, 655, 709, 1140
BmiI	GGNNCC	2 cut(s)	626, 1142
BmrFI	CCNGG	6 cut(s)	428, 481, 629, 645, 1818, 1870
BmsI	GCATC	6 cut(s)	341, 705, 807, 949, 1699, 1888
BpiI	GAAGAC	3 cut(s)	675, 888, 929
BplI	GAGNNNNNCTC	2 cut(s)	1383, 1415
BpmI	CTGGAG	2 cut(s)	1437, 1839
BpuEI	CTTGAG	4 cut(s)	347, 736, 1140, 1397
Bsa29I	ATCGAT	1 cut(s)	174
BsaJI	CCNNGG	7 cut(s)	185, 644, 876, 993, 1556, 1781, 1816
Bsc4I	CCNNNNNNNGG	5 cut(s)	212, 512, 999, 1822, 1823
Bse1I	ACTGG	1 cut(s)	1260
Bse21I	CCTNAGG	1 cut(s)	620
Bse3DI	GCAATG	2 cut(s)	768, 1104
BseBI	CCWGG	6 cut(s)	428, 481, 629, 645, 1818, 1870
BseCI	ATCGAT	1 cut(s)	174
BseDI	CCNNGG	7 cut(s)	185, 644, 876, 993, 1556, 1781, 1816
BseGI	GGATG	6 cut(s)	199, 562, 871, 1312, 1441, 1903
BseLI	CCNNNNNNNGG	5 cut(s)	212, 512, 999, 1822, 1823
BseMI	GCAATG	2 cut(s)	768, 1104
BseMII	CTCAG	3 cut(s)	68, 611, 762
BseNI	ACTGG	1 cut(s)	1260
BseRI	GAGGAG	4 cut(s)	1010, 1394, 1427, 1615
BseSI	GKGCMC	2 cut(s)	392, 1335
BseXI	GCAGC	8 cut(s)	358, 705, 709, 794, 1034, 1462, 1618, 1768
BsgI	GTGCAG	2 cut(s)	712, 1263
Bsh1285I	CGRYCG	1 cut(s)	662
BshFI	GGCC	6 cut(s)	267, 381, 710, 1141, 1798, 1868
BshNI	GGYRCC	1 cut(s)	624
BshVI	ATCGAT	1 cut(s)	174
BsiEI	CGRYCG	1 cut(s)	662
BsiHKAI	GWGCWC	2 cut(s)	392, 986
BsiSI	CCGG	1 cut(s)	1316
BslFI	GGGAC	3 cut(s)	612, 1689, 1799
BslI	CCNNNNNNNGG	5 cut(s)	212, 512, 999, 1822, 1823
BsmAI	GTCTC	4 cut(s)	51, 365, 810, 1672
BsmFI	GGGAC	3 cut(s)	612, 1689, 1799
BsmI	GAATGC	1 cut(s)	1024
BsnI	GGCC	6 cut(s)	267, 381, 710, 1141, 1798, 1868
Bsp1286I	GDGCHC	4 cut(s)	392, 986, 1335, 1654
BspACI	CCGC	5 cut(s)	100, 382, 725, 962, 1239
BspANI	GGCC	6 cut(s)	267, 381, 710, 1141, 1798, 1868
BspCNI	CTCAG	3 cut(s)	67, 612, 761
BspDI	ATCGAT	1 cut(s)	174
BspHI	TCATGA	2 cut(s)	151, 1405
BspLI	GGNNCC	2 cut(s)	626, 1142
BspMI	ACCTGC	1 cut(s)	1235
BspPI	GGATC	4 cut(s)	656, 760, 1349, 1622
BspQI	GCTCTTC	1 cut(s)	1452
BspT107I	GGYRCC	1 cut(s)	624
BsrDI	GCAATG	2 cut(s)	768, 1104
BsrI	ACTGG	1 cut(s)	1260
BssECI	CCNNGG	7 cut(s)	185, 644, 876, 993, 1556, 1781, 1816
BssNAI	GTATAC	1 cut(s)	1252
BssSI	CACGAG	1 cut(s)	1122
BssT1I	CCWWGG	3 cut(s)	185, 1556, 1781
Bst1107I	GTATAC	1 cut(s)	1252
Bst2BI	CACGAG	1 cut(s)	1122
Bst2UI	CCWGG	6 cut(s)	428, 481, 629, 645, 1818, 1870
Bst4CI	ACNGT	7 cut(s)	7, 73, 394, 487, 663, 674, 928
Bst6I	CTCTTC	4 cut(s)	1194, 1404, 1452, 1676
BstC8I	GCNNGC	3 cut(s)	258, 1185, 1499
BstDEI	CTNAG	6 cut(s)	54, 620, 748, 1173, 1179, 1282
BstF5I	GGATG	6 cut(s)	199, 562, 871, 1312, 1441, 1903
BstH2I	RGCGCY	1 cut(s)	1993
BstHHI	GCGC	4 cut(s)	123, 262, 1503, 1992
BstMAI	GTCTC	4 cut(s)	51, 365, 810, 1672
BstMCI	CGRYCG	1 cut(s)	662
BstMWI	GCNNNNNNNGC	2 cut(s)	387, 779
BstNI	CCWGG	6 cut(s)	428, 481, 629, 645, 1818, 1870
BstNSI	RCATGY	1 cut(s)	388
BstSCI	CCNGG	6 cut(s)	426, 479, 627, 643, 1816, 1868
BstSFI	CTRYAG	2 cut(s)	72, 1859
BstSLI	GKGCMC	2 cut(s)	392, 1335
BstV1I	GCAGC	8 cut(s)	358, 705, 709, 794, 1034, 1462, 1618, 1768
BstV2I	GAAGAC	3 cut(s)	675, 888, 929
BstX2I	RGATCY	4 cut(s)	648, 752, 1661, 1772
BstYI	RGATCY	4 cut(s)	648, 752, 1661, 1772
BstZ17I	GTATAC	1 cut(s)	1252
Bsu15I	ATCGAT	1 cut(s)	174
Bsu36I	CCTNAGG	1 cut(s)	620
BsuI	GTATCC	1 cut(s)	1732
BsuRI	GGCC	6 cut(s)	267, 381, 710, 1141, 1798, 1868
BsuTUI	ATCGAT	1 cut(s)	174
BtgZI	GCGATG	1 cut(s)	1737
BtsCI	GGATG	6 cut(s)	199, 562, 871, 1312, 1441, 1903
BtsIMutI	CAGTG	1 cut(s)	933
BveI	ACCTGC	1 cut(s)	1235
Cac8I	GCNNGC	3 cut(s)	258, 1185, 1499
CciI	TCATGA	2 cut(s)	151, 1405
CfoI	GCGC	4 cut(s)	123, 262, 1503, 1992
Cfr13I	GGNCC	4 cut(s)	410, 655, 709, 1140
ClaI	ATCGAT	1 cut(s)	174
CsiI	ACCWGGT	1 cut(s)	627
Csp6I	GTAC	5 cut(s)	11, 625, 763, 968, 1553
CviAII	CATG	8 cut(s)	152, 227, 385, 448, 979, 1111, 1146, 1406
CviQI	GTAC	5 cut(s)	11, 625, 763, 968, 1553
DdeI	CTNAG	6 cut(s)	54, 620, 748, 1173, 1179, 1282
DraI	TTTAAA	1 cut(s)	1938
DraIII	CACNNNGTG	1 cut(s)	1339
EaeI	YGGCCR	2 cut(s)	265, 379
Eam1104I	CTCTTC	4 cut(s)	1194, 1404, 1452, 1676
EarI	CTCTTC	4 cut(s)	1194, 1404, 1452, 1676
Eco130I	CCWWGG	3 cut(s)	185, 1556, 1781
Eco147I	AGGCCT	1 cut(s)	1798
Eco24I	GRGCYC	1 cut(s)	1654
Eco32I	GATATC	1 cut(s)	199
Eco47I	GGWCC	2 cut(s)	410, 655
Eco57I	CTGAAG	2 cut(s)	933, 1079
Eco81I	CCTNAGG	1 cut(s)	620
EcoO109I	RGGNCCY	1 cut(s)	1140
EcoRII	CCWGG	6 cut(s)	426, 479, 627, 643, 1816, 1868
EcoRV	GATATC	1 cut(s)	199
EcoT14I	CCWWGG	3 cut(s)	185, 1556, 1781
EcoT22I	ATGCAT	1 cut(s)	1151
EcoT38I	GRGCYC	1 cut(s)	1654
ErhI	CCWWGG	3 cut(s)	185, 1556, 1781
FaeI	CATG	8 cut(s)	155, 230, 388, 451, 982, 1114, 1149, 1409
FalI	AAGNNNNNCTT	8 cut(s)	445, 477, 575, 607, 771, 803, 1481, 1513
FaqI	GGGAC	3 cut(s)	612, 1689, 1799
FatI	CATG	8 cut(s)	151, 226, 384, 447, 978, 1110, 1145, 1405
FauI	CCCGC	2 cut(s)	107, 955
FblI	GTMKAC	2 cut(s)	1251, 1543
Fnu4HI	GCNGC	9 cut(s)	372, 382, 694, 723, 783, 1023, 1476, 1607, 1757
FokI	GGATG	6 cut(s)	206, 569, 878, 1319, 1448, 1910
FriOI	GRGCYC	1 cut(s)	1654
Fsp4HI	GCNGC	9 cut(s)	372, 382, 694, 723, 783, 1023, 1476, 1607, 1757
FspBI	CTAG	7 cut(s)	186, 414, 1635, 1671, 1770, 1788, 1993
FspI	TGCGCA	1 cut(s)	122
GlaI	GCGC	4 cut(s)	122, 261, 1502, 1991
GluI	GCNGC	9 cut(s)	372, 382, 694, 723, 783, 1023, 1476, 1607, 1757
GsuI	CTGGAG	2 cut(s)	1437, 1839
HaeII	RGCGCY	1 cut(s)	1993
HaeIII	GGCC	6 cut(s)	267, 381, 710, 1141, 1798, 1868
HapII	CCGG	1 cut(s)	1316
HhaI	GCGC	4 cut(s)	123, 262, 1503, 1992
Hin1II	CATG	8 cut(s)	155, 230, 388, 451, 982, 1114, 1149, 1409
Hin6I	GCGC	4 cut(s)	121, 260, 1501, 1990
HinP1I	GCGC	4 cut(s)	121, 260, 1501, 1990
HincII	GTYRAC	3 cut(s)	34, 1544, 1699
HindII	GTYRAC	3 cut(s)	34, 1544, 1699
HindIII	AAGCTT	2 cut(s)	254, 1495
HinfI	GANTC	6 cut(s)	1042, 1398, 1440, 1450, 1540, 1835
HpaII	CCGG	1 cut(s)	1316
HphI	GGTGA	4 cut(s)	227, 956, 1430, 1718
Hpy166II	GTNNAC	7 cut(s)	34, 79, 390, 1252, 1544, 1584, 1699
Hpy188I	TCNGA	7 cut(s)	57, 515, 877, 913, 1047, 1803, 1845
Hpy188III	TCNNGA	9 cut(s)	152, 750, 1124, 1358, 1406, 1454, 1770, 1788, 1959
Hpy8I	GTNNAC	7 cut(s)	34, 79, 390, 1252, 1544, 1584, 1699
Hpy99I	CGWCG	1 cut(s)	1908
HpyAV	CCTTC	7 cut(s)	16, 113, 471, 1189, 1388, 1846, 1858
HpyCH4III	ACNGT	7 cut(s)	7, 73, 394, 487, 663, 674, 928
HpyF10VI	GCNNNNNNNGC	2 cut(s)	387, 779
HpyF3I	CTNAG	6 cut(s)	54, 620, 748, 1173, 1179, 1282
Hsp92II	CATG	8 cut(s)	155, 230, 388, 451, 982, 1114, 1149, 1409
HspAI	GCGC	4 cut(s)	121, 260, 1501, 1990
KpnI	GGTACC	1 cut(s)	628
LguI	GCTCTTC	1 cut(s)	1452
Lsp1109I	GCAGC	8 cut(s)	358, 705, 709, 794, 1034, 1462, 1618, 1768
LweI	GCATC	6 cut(s)	341, 705, 807, 949, 1699, 1888
MabI	ACCWGGT	1 cut(s)	627
MaeI	CTAG	7 cut(s)	186, 414, 1635, 1671, 1770, 1788, 1993
MaeIII	GTNAC	5 cut(s)	585, 674, 895, 1124, 1343
MfeI	CAATTG	4 cut(s)	465, 1445, 1641, 1971
MflI	RGATCY	4 cut(s)	648, 752, 1661, 1772
MhlI	GDGCHC	4 cut(s)	392, 986, 1335, 1654
MlsI	TGGCCA	1 cut(s)	267
MluNI	TGGCCA	1 cut(s)	267
MlyI	GAGTC	4 cut(s)	1392, 1444, 1549, 1829
MmeI	TCCRAC	3 cut(s)	493, 586, 1365
Mox20I	TGGCCA	1 cut(s)	267
Mph1103I	ATGCAT	1 cut(s)	1151
MroXI	GAANNNNTTC	3 cut(s)	26, 301, 520
MscI	TGGCCA	1 cut(s)	267
MseI	TTAA	3 cut(s)	531, 1091, 1937
MslI	CAYNNNNRTG	2 cut(s)	902, 1109
Msp20I	TGGCCA	1 cut(s)	267
MspI	CCGG	1 cut(s)	1316
MspR9I	CCNGG	6 cut(s)	428, 481, 629, 645, 1818, 1870
MunI	CAATTG	4 cut(s)	465, 1445, 1641, 1971
Mva1269I	GAATGC	1 cut(s)	1024
MvaI	CCWGG	6 cut(s)	428, 481, 629, 645, 1818, 1870
MwoI	GCNNNNNNNGC	2 cut(s)	387, 779
NlaIII	CATG	8 cut(s)	155, 230, 388, 451, 982, 1114, 1149, 1409
NlaIV	GGNNCC	2 cut(s)	626, 1142
NmuCI	GTSAC	4 cut(s)	585, 895, 1124, 1343
NsbI	TGCGCA	1 cut(s)	122
NsiI	ATGCAT	1 cut(s)	1151
NspI	RCATGY	1 cut(s)	388
PagI	TCATGA	2 cut(s)	151, 1405
PaqCI	CACCTGC	1 cut(s)	1235
PceI	AGGCCT	1 cut(s)	1798
PciSI	GCTCTTC	1 cut(s)	1452
PctI	GAATGC	1 cut(s)	1024
PdmI	GAANNNNTTC	3 cut(s)	26, 301, 520
PfeI	GAWTC	2 cut(s)	1042, 1440
PflFI	GACNNNGTC	1 cut(s)	583
PkrI	GCNGC	9 cut(s)	373, 383, 695, 724, 784, 1024, 1477, 1608, 1758
PleI	GAGTC	4 cut(s)	1392, 1444, 1548, 1829
PpsI	GAGTC	4 cut(s)	1392, 1444, 1548, 1829
PsiI	TTATAA	2 cut(s)	398, 612
Psp6I	CCWGG	6 cut(s)	426, 479, 627, 643, 1816, 1868
PspGI	CCWGG	6 cut(s)	426, 479, 627, 643, 1816, 1868
PspN4I	GGNNCC	2 cut(s)	626, 1142
PspPI	GGNCC	4 cut(s)	410, 655, 709, 1140
PsuI	RGATCY	4 cut(s)	648, 752, 1661, 1772
PsyI	GACNNNGTC	1 cut(s)	583
RsaI	GTAC	5 cut(s)	12, 626, 764, 969, 1554
RsaNI	GTAC	5 cut(s)	11, 625, 763, 968, 1553
RseI	CAYNNNNRTG	2 cut(s)	902, 1109
SalI	GTCGAC	1 cut(s)	1542
SapI	GCTCTTC	1 cut(s)	1452
SaqAI	TTAA	3 cut(s)	531, 1091, 1937
SatI	GCNGC	9 cut(s)	372, 382, 694, 723, 783, 1023, 1476, 1607, 1757
Sau96I	GGNCC	4 cut(s)	410, 655, 709, 1140
SchI	GAGTC	4 cut(s)	1392, 1444, 1549, 1829
ScrFI	CCNGG	6 cut(s)	428, 481, 629, 645, 1818, 1870
SduI	GDGCHC	4 cut(s)	392, 986, 1335, 1654
SexAI	ACCWGGT	1 cut(s)	627
SfaNI	GCATC	6 cut(s)	341, 705, 807, 949, 1699, 1888
SfcI	CTRYAG	2 cut(s)	72, 1859
SinI	GGWCC	2 cut(s)	410, 655
SmiMI	CAYNNNNRTG	2 cut(s)	902, 1109
SmlI	CTYRAG	4 cut(s)	362, 715, 1155, 1376
SmoI	CTYRAG	4 cut(s)	362, 715, 1155, 1376
SseBI	AGGCCT	1 cut(s)	1798
SsiI	CCGC	5 cut(s)	100, 382, 725, 962, 1239
SspI	AATATT	2 cut(s)	292, 301
SspMI	CTAG	7 cut(s)	186, 414, 1635, 1671, 1770, 1788, 1993
StuI	AGGCCT	1 cut(s)	1798
StyD4I	CCNGG	6 cut(s)	426, 479, 627, 643, 1816, 1868
StyI	CCWWGG	3 cut(s)	185, 1556, 1781
TaaI	ACNGT	7 cut(s)	7, 73, 394, 487, 663, 674, 928
TaqI	TCGA	3 cut(s)	174, 1543, 1654
TaqII	GACCGA	3 cut(s)	672, 923, 1007
TauI	GCSGC	1 cut(s)	384
TfiI	GAWTC	2 cut(s)	1042, 1440
Tru1I	TTAA	3 cut(s)	531, 1091, 1937
Tru9I	TTAA	3 cut(s)	531, 1091, 1937
TscAI	CASTG	1 cut(s)	933
TseFI	GTSAC	4 cut(s)	585, 895, 1124, 1343
TseI	GCWGC	8 cut(s)	371, 693, 722, 782, 1022, 1475, 1606, 1756
Tsp45I	GTSAC	4 cut(s)	585, 895, 1124, 1343
TspGWI	ACGGA	3 cut(s)	914, 1205, 1693
TspRI	CASTG	1 cut(s)	933
Tth111I	GACNNNGTC	1 cut(s)	583
VneI	GTGCAC	1 cut(s)	388
VpaK11BI	GGWCC	2 cut(s)	410, 655
XapI	RAATTY	3 cut(s)	145, 1320, 1562
XbaI	TCTAGA	2 cut(s)	1769, 1787
XceI	RCATGY	1 cut(s)	388
XcmI	CCANNNNNNNNNTGG	1 cut(s)	209
XmaJI	CCTAGG	1 cut(s)	185
XmiI	GTMKAC	2 cut(s)	1251, 1543
XmnI	GAANNNNTTC	3 cut(s)	26, 301, 520
XspI	CTAG	7 cut(s)	186, 414, 1635, 1671, 1770, 1788, 1993
Zsp2I	ATGCAT	1 cut(s)	1151

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.