Prupe.6G149400_v2.0.a1

Involved in the biogenesis of the 60S ribosomal subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0001573
Physical Location & Seq
Reverse (-)
12681878 .. 12683969
2092 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G149400.1

Sequence Viewer

Length: 1992 bp
ATGGTGCAATATAACTTCAAGAAGATGACTGTTGTACCAAATGGGAAGGACTTCATTGACATTATCCTATCTCGCACCCAGAGGCAGACCCCAACTGTAGTCCACAAGGGTTATGCCATTTCCTCCCTCCGTGAGTTCTATATGCGCAAAGTGAAATGTACCCAACAAAATTTTCATGAGAAGCTCTCCACAATTATTGATGAGTTTCCTAGGCTGGATGACGTCCACCCTTTCTATGGCGACCTTCTTCATGTTCTCTACAACAAAGACCATTACAAGCTTGCACTTGGCCAGATCAATACTTCAAGGAACCTTATTGGAAAGATTTGTAAAGATTATGTGAAATTGTTAAAGTATGGTGATTCACTTTACCGATGCAAATGTCTCAAAGTCGCTGCACTTGGCCGCATGTGCACTATTATAAAGAGGATTGGTCCTAGTTTAGCTTACCTTGAACAAATTAGGCAACACATGGCAAGGCTACCTTCAATTGACCCTAATACCAGGACAATATTGATTTGTGGCTATCCGAATGTTGGAAAGAGCTCATTCATTAACAAGATCACCAGGGCTGATGTGGATGTCCAGCCATATGCTTTTACCACTAAGTCACTCTTTGTGGGACATACAGATTATAAATACTTGAGGTACCAGGTAATTGATACACCAGGGATTTTGGACCGCCCATTTGAAGACCGTAACATTATTGAGATGTGCAGCATTACAGCTTTGGCCCACTTGAGAGCTGCGGTGCTGTTTTTCTTAGACATCTCGGGGTCTTGTGGGTACAGCATTGCCCAACAGGCAGCTCTTTTTCACAGTATTAAGTCTCTGTTTATGAACAAACCGTTGATCATAGTCTGCAACAAGACCGATTTGCAGCCATTGGAGGGTATATCCGAAGAAGACAAGAAGTTGGTCACGGAGATGAAAGCTGATGCTATGAAGACAGTGATTGGTCTAGGTGAGGCTACGAATGATGAGGGGGAGGGGGTGATTGTTGTAAAGAATGCAGCTTGTGAGAGGTTGTTGAATCAGAGAGTGGAATTGAAGATGAAATCCAAAAAGATAAATGACTGTTTAAATCGTTTTCATGTTGCAATGCCAAAGCCACGTGACAATAAGGAAAGGTCCCCATGTATACCTCGGGCAGATTTAGAAGCCAAGGCTAAGCAAGCGGCGGAGAAGGAAAAGAGAAATACAGAAAAGGATTTGGAGAATGAGAATGGCGGTGCAGGTGTATACTCTGCCAGTTTGAAGAAGAATTATATCTTAGCTAATGATGAATGGAAAGAGGATGCCATGCCAGAAATTCTTGATGGGCACAATGTATACGACTTTGTTGATCCTGATATTTTGCTTAGGCTTGAGGAATTGGAGCGAGAAGAAGGACGCCGGCAGGCAGAGGGTGATGATGATTTTGAGATGGATGGATTGGAATTGACTACAGAAGAGCAAAAGACACTGGATGAGATAAGGAAAAAGAAGAGCTTGCTCATTCAACAACATAGAATGAAGAAAAGTACAGCAGAGAGTCGACCAACTGTACCAAGGAAATTTGACAAGGACGGGGAGTTCACATCAAAGAGAATGGGGAGGCAGCTATCAAAGTTGGGTCTTAATCCTACTATGGCTATTAACCGAGCTCGAAGCAGATCTGTCTCTACTAGGGGCCGGAGGAGGGAGAGATCACTTGACAAGGATGATATTGATGGTGGTGATGCTGTGGATGTGTATACACCCAACAAGAAGCAATGCATGTTATCTAGATCCCGTTCGAGGTCAAGATCTTGCCCTCAAACTGAAGTTGTCCCTGGAGAGGGCTTCAAGGACTCTGCTCAAAAGGATAGGGCATTACAAAAGGCCAATAAATCTAATAAGATGAGAAACAAGAATGCTCGTCGTGGAGAGGCAGATAGGGTCATTCCCACTTTAAAACCAAAGCACTTGTTCTCTGGAAAACGCTCAATTGGAAAAACCCAAAGGCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
MMR_HSR1 NOG1 NOGCT

Protein Analysis

664

Amino Acids

75.68

Weight (kDa)

9.45

Isoelectric Point (pI)

46.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 422, 636
AarI CACCTGC 1 cut(s) 1226
AatII GACGTC 1 cut(s) 225
Acc16I TGCGCA 1 cut(s) 146
Acc36I ACCTGC 1 cut(s) 1226
Acc65I GGTACC 1 cut(s) 648
AccB1I GGYRCC 1 cut(s) 648
AccI GTMKAC 5 cut(s) 1141, 1242, 1332, 1537, 1736
AciI CCGC 6 cut(s) 406, 682, 749, 1178, 1181, 1230
AclWI GGATC 2 cut(s) 1340, 1764
AcoI YGGCCR 2 cut(s) 289, 403
AcsI RAATTY 3 cut(s) 169, 1311, 1556
AcuI CTGAAG 1 cut(s) 1824
AcvI CACGTG 1 cut(s) 1115
AcyI GRCGYC 2 cut(s) 222, 1393
AfaI GTAC 6 cut(s) 36, 160, 650, 788, 1525, 1548
AfiI CCNNNNNNNGG 7 cut(s) 236, 536, 890, 1681, 1779, 1819, 1820
AjnI CCWGG 5 cut(s) 503, 566, 651, 667, 1813
AjuI GAANNNNNNNTTGG 2 cut(s) 156, 188
AloI GAACNNNNNNTCC 2 cut(s) 1559, 1591
Alw21I GWGCWC 3 cut(s) 416, 548, 1648
Alw26I GTCTC 3 cut(s) 389, 834, 1666
Alw44I GTGCAC 1 cut(s) 412
AlwI GGATC 2 cut(s) 1340, 1764
Ama87I CYCGRG 2 cut(s) 772, 1146
AoxI GGCC 5 cut(s) 289, 403, 732, 1672, 1863
ApaLI GTGCAC 1 cut(s) 412
ApeKI GCWGC 7 cut(s) 395, 717, 746, 806, 880, 1013, 1600
ApoI RAATTY 3 cut(s) 169, 1311, 1556
ArsI GACNNNNNNTTYG 2 cut(s) 671, 703
Asp700I GAANNNNTTC 1 cut(s) 50
Asp718I GGTACC 1 cut(s) 648
AspA2I CCTAGG 1 cut(s) 209
AspLEI GCGC 1 cut(s) 147
AspS9I GGNCC 5 cut(s) 434, 679, 733, 1131, 1672
AsuHPI GGTGA 6 cut(s) 371, 556, 977, 1006, 1421, 1730
AvaI CYCGRG 2 cut(s) 772, 1146
AvaII GGWCC 3 cut(s) 434, 679, 1131
AvrII CCTAGG 1 cut(s) 209
BaeGI GKGCMC 2 cut(s) 416, 1326
BaeI ACNNNNGTAYC 2 cut(s) 18, 51
BalI TGGCCA 1 cut(s) 291
BanI GGYRCC 1 cut(s) 648
BanII GRGCYC 2 cut(s) 548, 1648
BbrPI CACGTG 1 cut(s) 1115
BbsI GAAGAC 3 cut(s) 699, 912, 953
Bbv12I GWGCWC 3 cut(s) 416, 548, 1648
BbvI GCAGC 7 cut(s) 382, 729, 733, 818, 892, 1025, 1612
BccI CCATC 4 cut(s) 1313, 1420, 1424, 1706
BciT130I CCWGG 5 cut(s) 505, 568, 653, 669, 1815
BclI TGATCA 1 cut(s) 852
BcoDI GTCTC 3 cut(s) 389, 834, 1666
BfaI CTAG 5 cut(s) 210, 438, 962, 1668, 1767
BfmI CTRYAG 2 cut(s) 96, 1446
BfuAI ACCTGC 1 cut(s) 1226
BglI GCCNNNNNGGC 1 cut(s) 803
BglII AGATCT 2 cut(s) 1655, 1787
BisI GCNGC 9 cut(s) 396, 406, 718, 747, 807, 881, 1014, 1179, 1601
BlnI CCTAGG 1 cut(s) 209
BlpI GCTNAGC 1 cut(s) 1170
BlsI GCNGC 9 cut(s) 397, 407, 719, 748, 808, 882, 1015, 1180, 1602
Bme1390I CCNGG 5 cut(s) 505, 568, 653, 669, 1815
Bme18I GGWCC 3 cut(s) 434, 679, 1131
BmeT110I CYCGRG 2 cut(s) 772, 1146
BmgT120I GGNCC 5 cut(s) 434, 679, 733, 1131, 1672
BmiI GGNNCC 4 cut(s) 311, 650, 1133, 1673
BmrFI CCNGG 5 cut(s) 505, 568, 653, 669, 1815
BmsI GCATC 4 cut(s) 365, 928, 1288, 1711
BpiI GAAGAC 3 cut(s) 699, 912, 953
BplI GAGNNNNNCTC 2 cut(s) 170, 202
BpmI CTGGAG 1 cut(s) 1836
Bpu10I CCTNAGC 1 cut(s) 1361
Bpu1102I GCTNAGC 1 cut(s) 1170
BpuEI CTTGAG 3 cut(s) 664, 760, 1388
BsaAI YACGTR 1 cut(s) 1115
BsaHI GRCGYC 2 cut(s) 222, 1393
BsaJI CCNNGG 7 cut(s) 209, 567, 668, 1145, 1164, 1550, 1813
Bsc4I CCNNNNNNNGG 7 cut(s) 236, 536, 890, 1681, 1779, 1819, 1820
Bse118I RCCGGY 1 cut(s) 1395
Bse1I ACTGG 2 cut(s) 1251, 1470
Bse3DI GCAATG 3 cut(s) 792, 1107, 1760
BseBI CCWGG 5 cut(s) 505, 568, 653, 669, 1815
BseDI CCNNGG 7 cut(s) 209, 567, 668, 1145, 1164, 1550, 1813
BseGI GGATG 7 cut(s) 223, 586, 1303, 1435, 1474, 1708, 1735
BseLI CCNNNNNNNGG 7 cut(s) 236, 536, 890, 1681, 1779, 1819, 1820
BseMI GCAATG 3 cut(s) 792, 1107, 1760
BseNI ACTGG 2 cut(s) 1251, 1470
BseRI GAGGAG 1 cut(s) 1693
BseSI GKGCMC 2 cut(s) 416, 1326
BseXI GCAGC 7 cut(s) 382, 729, 733, 818, 892, 1025, 1612
BsgI GTGCAG 3 cut(s) 381, 736, 1254
BshFI GGCC 5 cut(s) 291, 405, 734, 1674, 1865
BshNI GGYRCC 1 cut(s) 648
BsiHKAI GWGCWC 3 cut(s) 416, 548, 1648
BsiHKCI CYCGRG 2 cut(s) 772, 1146
BsiSI CCGG 2 cut(s) 1396, 1675
BslFI GGGAC 3 cut(s) 636, 1117, 1796
BslI CCNNNNNNNGG 7 cut(s) 236, 536, 890, 1681, 1779, 1819, 1820
BsmAI GTCTC 3 cut(s) 389, 834, 1666
BsmFI GGGAC 3 cut(s) 636, 1117, 1796
BsmI GAATGC 2 cut(s) 1015, 1900
BsnI GGCC 5 cut(s) 291, 405, 734, 1674, 1865
BsoBI CYCGRG 2 cut(s) 772, 1146
Bsp1286I GDGCHC 4 cut(s) 416, 548, 1326, 1648
Bsp143I GATC 8 cut(s) 294, 561, 852, 1345, 1655, 1688, 1769, 1787
Bsp1720I GCTNAGC 1 cut(s) 1170
BspACI CCGC 6 cut(s) 406, 682, 749, 1178, 1181, 1230
BspANI GGCC 5 cut(s) 291, 405, 734, 1674, 1865
BspHI TCATGA 1 cut(s) 175
BspLI GGNNCC 4 cut(s) 311, 650, 1133, 1673
BspMI ACCTGC 1 cut(s) 1226
BspPI GGATC 2 cut(s) 1340, 1764
BspQI GCTCTTC 2 cut(s) 1446, 1481
BspT107I GGYRCC 1 cut(s) 648
BsrDI GCAATG 3 cut(s) 792, 1107, 1760
BsrFI RCCGGY 1 cut(s) 1395
BsrI ACTGG 2 cut(s) 1251, 1470
BssAI RCCGGY 1 cut(s) 1395
BssECI CCNNGG 7 cut(s) 209, 567, 668, 1145, 1164, 1550, 1813
BssMI GATC 8 cut(s) 294, 561, 852, 1345, 1655, 1688, 1769, 1787
BssNAI GTATAC 4 cut(s) 1142, 1243, 1333, 1737
BssNI GRCGYC 2 cut(s) 222, 1393
BssT1I CCWWGG 3 cut(s) 209, 1164, 1550
Bst1107I GTATAC 4 cut(s) 1142, 1243, 1333, 1737
Bst2UI CCWGG 5 cut(s) 505, 568, 653, 669, 1815
Bst4CI ACNGT 8 cut(s) 31, 97, 698, 821, 849, 952, 1079, 1546
Bst6I CTCTTC 2 cut(s) 1446, 1481
BstACI GRCGYC 2 cut(s) 222, 1393
BstBAI YACGTR 1 cut(s) 1115
BstC8I GCNNGC 5 cut(s) 282, 1176, 1397, 1401, 1493
BstDEI CTNAG 5 cut(s) 606, 763, 1170, 1273, 1361
BstF5I GGATG 7 cut(s) 223, 586, 1303, 1435, 1474, 1708, 1735
BstHHI GCGC 1 cut(s) 147
BstKTI GATC 8 cut(s) 297, 564, 855, 1348, 1658, 1691, 1772, 1790
BstMAI GTCTC 3 cut(s) 389, 834, 1666
BstMBI GATC 8 cut(s) 294, 561, 852, 1345, 1655, 1688, 1769, 1787
BstMWI GCNNNNNNNGC 3 cut(s) 411, 803, 1175
BstNI CCWGG 5 cut(s) 505, 568, 653, 669, 1815
BstNSI RCATGY 2 cut(s) 412, 1762
BstSCI CCNGG 5 cut(s) 503, 566, 651, 667, 1813
BstSFI CTRYAG 2 cut(s) 96, 1446
BstSLI GKGCMC 2 cut(s) 416, 1326
BstV1I GCAGC 7 cut(s) 382, 729, 733, 818, 892, 1025, 1612
BstV2I GAAGAC 3 cut(s) 699, 912, 953
BstX2I RGATCY 3 cut(s) 1655, 1769, 1787
BstYI RGATCY 3 cut(s) 1655, 1769, 1787
BstZ17I GTATAC 4 cut(s) 1142, 1243, 1333, 1737
BsuRI GGCC 5 cut(s) 291, 405, 734, 1674, 1865
BtsCI GGATG 7 cut(s) 223, 586, 1303, 1435, 1474, 1708, 1735
BtsIMutI CAGTG 2 cut(s) 957, 1463
BveI ACCTGC 1 cut(s) 1226
Cac8I GCNNGC 5 cut(s) 282, 1176, 1397, 1401, 1493
CciI TCATGA 1 cut(s) 175
CfoI GCGC 1 cut(s) 147
Cfr10I RCCGGY 1 cut(s) 1395
Cfr13I GGNCC 5 cut(s) 434, 679, 733, 1131, 1672
CseI GACGC 1 cut(s) 1401
CsiI ACCWGGT 1 cut(s) 651
Csp6I GTAC 6 cut(s) 35, 159, 649, 787, 1524, 1547
CspCI CAANNNNNGTGG 2 cut(s) 178, 213
CviAII CATG 8 cut(s) 176, 251, 409, 472, 1094, 1137, 1303, 1759
CviQI GTAC 6 cut(s) 35, 159, 649, 787, 1524, 1547
DdeI CTNAG 5 cut(s) 606, 763, 1170, 1273, 1361
DpnI GATC 8 cut(s) 296, 563, 854, 1347, 1657, 1690, 1771, 1789
DpnII GATC 8 cut(s) 294, 561, 852, 1345, 1655, 1688, 1769, 1787
DraI TTTAAA 2 cut(s) 1083, 1935
EaeI YGGCCR 2 cut(s) 289, 403
Eam1104I CTCTTC 2 cut(s) 1446, 1481
EarI CTCTTC 2 cut(s) 1446, 1481
EciI GGCGGA 1 cut(s) 1196
Ecl136II GAGCTC 2 cut(s) 546, 1646
Eco130I CCWWGG 3 cut(s) 209, 1164, 1550
Eco24I GRGCYC 2 cut(s) 548, 1648
Eco47I GGWCC 3 cut(s) 434, 679, 1131
Eco53kI GAGCTC 2 cut(s) 546, 1646
Eco57I CTGAAG 1 cut(s) 1824
Eco72I CACGTG 1 cut(s) 1115
Eco88I CYCGRG 2 cut(s) 772, 1146
EcoICRI GAGCTC 2 cut(s) 546, 1646
EcoO109I RGGNCCY 1 cut(s) 1131
EcoRII CCWGG 5 cut(s) 503, 566, 651, 667, 1813
EcoT14I CCWWGG 3 cut(s) 209, 1164, 1550
EcoT22I ATGCAT 1 cut(s) 1760
EcoT38I GRGCYC 2 cut(s) 548, 1648
ErhI CCWWGG 3 cut(s) 209, 1164, 1550
FaeI CATG 8 cut(s) 179, 254, 412, 475, 1097, 1140, 1306, 1762
FalI AAGNNNNNCTT 6 cut(s) 469, 501, 599, 631, 1475, 1507
FaqI GGGAC 3 cut(s) 636, 1117, 1796
FatI CATG 8 cut(s) 175, 250, 408, 471, 1093, 1136, 1302, 1758
FauNDI CATATG 1 cut(s) 592
FbaI TGATCA 1 cut(s) 852
FblI GTMKAC 5 cut(s) 1141, 1242, 1332, 1537, 1736
Fnu4HI GCNGC 9 cut(s) 396, 406, 718, 747, 807, 881, 1014, 1179, 1601
FokI GGATG 7 cut(s) 230, 593, 1310, 1442, 1481, 1715, 1742
FriOI GRGCYC 2 cut(s) 548, 1648
Fsp4HI GCNGC 9 cut(s) 396, 406, 718, 747, 807, 881, 1014, 1179, 1601
FspBI CTAG 5 cut(s) 210, 438, 962, 1668, 1767
FspI TGCGCA 1 cut(s) 146
GlaI GCGC 1 cut(s) 146
GluI GCNGC 9 cut(s) 396, 406, 718, 747, 807, 881, 1014, 1179, 1601
GsuI CTGGAG 1 cut(s) 1836
HaeIII GGCC 5 cut(s) 291, 405, 734, 1674, 1865
HapII CCGG 2 cut(s) 1396, 1675
HgaI GACGC 1 cut(s) 1401
HhaI GCGC 1 cut(s) 147
Hin1I GRCGYC 2 cut(s) 222, 1393
Hin1II CATG 8 cut(s) 179, 254, 412, 475, 1097, 1140, 1306, 1762
Hin6I GCGC 1 cut(s) 145
HinP1I GCGC 1 cut(s) 145
HincII GTYRAC 1 cut(s) 1538
HindII GTYRAC 1 cut(s) 1538
HindIII AAGCTT 1 cut(s) 278
HinfI GANTC 4 cut(s) 362, 1033, 1534, 1832
HpaII CCGG 2 cut(s) 1396, 1675
HphI GGTGA 6 cut(s) 371, 556, 977, 1006, 1421, 1730
Hpy166II GTNNAC 9 cut(s) 103, 226, 414, 1142, 1243, 1333, 1538, 1578, 1737
Hpy188I TCNGA 3 cut(s) 531, 901, 1038
Hpy188III TCNNGA 7 cut(s) 19, 176, 1316, 1349, 1767, 1785, 1956
Hpy8I GTNNAC 9 cut(s) 103, 226, 414, 1142, 1243, 1333, 1538, 1578, 1737
Hpy99I CGWCG 1 cut(s) 1905
HpyAV CCTTC 5 cut(s) 40, 254, 495, 1180, 1382
HpyCH4III ACNGT 8 cut(s) 31, 97, 698, 821, 849, 952, 1079, 1546
HpyCH4IV ACGT 2 cut(s) 222, 1114
HpyF10VI GCNNNNNNNGC 3 cut(s) 411, 803, 1175
HpyF3I CTNAG 5 cut(s) 606, 763, 1170, 1273, 1361
HpySE526I ACGT 2 cut(s) 222, 1114
Hsp92I GRCGYC 2 cut(s) 222, 1393
Hsp92II CATG 8 cut(s) 179, 254, 412, 475, 1097, 1140, 1306, 1762
HspAI GCGC 1 cut(s) 145
KpnI GGTACC 1 cut(s) 652
KroI GCCGGC 1 cut(s) 1395
KroNI GCCGGC 1 cut(s) 1397
Ksp22I TGATCA 1 cut(s) 852
Kzo9I GATC 8 cut(s) 294, 561, 852, 1345, 1655, 1688, 1769, 1787
LguI GCTCTTC 2 cut(s) 1446, 1481
LmnI GCTCC 1 cut(s) 1378
Lsp1109I GCAGC 7 cut(s) 382, 729, 733, 818, 892, 1025, 1612
LweI GCATC 4 cut(s) 365, 928, 1288, 1711
MabI ACCWGGT 1 cut(s) 651
MaeI CTAG 5 cut(s) 210, 438, 962, 1668, 1767
MaeII ACGT 2 cut(s) 222, 1114
MaeIII GTNAC 4 cut(s) 609, 698, 919, 1115
MalI GATC 8 cut(s) 296, 563, 854, 1347, 1657, 1690, 1771, 1789
MboI GATC 8 cut(s) 294, 561, 852, 1345, 1655, 1688, 1769, 1787
MfeI CAATTG 2 cut(s) 489, 1968
MflI RGATCY 3 cut(s) 1655, 1769, 1787
MhlI GDGCHC 4 cut(s) 416, 548, 1326, 1648
MlsI TGGCCA 1 cut(s) 291
MluNI TGGCCA 1 cut(s) 291
MlyI GAGTC 2 cut(s) 1543, 1826
MmeI TCCRAC 1 cut(s) 517
Mox20I TGGCCA 1 cut(s) 291
Mph1103I ATGCAT 1 cut(s) 1760
MroNI GCCGGC 1 cut(s) 1395
MroXI GAANNNNTTC 1 cut(s) 50
MscI TGGCCA 1 cut(s) 291
MseI TTAA 8 cut(s) 350, 555, 825, 1082, 1620, 1638, 1934, 1990
MslI CAYNNNNRTG 1 cut(s) 926
Msp20I TGGCCA 1 cut(s) 291
MspI CCGG 2 cut(s) 1396, 1675
MspR9I CCNGG 5 cut(s) 505, 568, 653, 669, 1815
MunI CAATTG 2 cut(s) 489, 1968
Mva1269I GAATGC 2 cut(s) 1015, 1900
MvaI CCWGG 5 cut(s) 505, 568, 653, 669, 1815
MwoI GCNNNNNNNGC 3 cut(s) 411, 803, 1175
NaeI GCCGGC 1 cut(s) 1397
NdeI CATATG 1 cut(s) 592
NdeII GATC 8 cut(s) 294, 561, 852, 1345, 1655, 1688, 1769, 1787
NgoMIV GCCGGC 1 cut(s) 1395
NlaIII CATG 8 cut(s) 179, 254, 412, 475, 1097, 1140, 1306, 1762
NlaIV GGNNCC 4 cut(s) 311, 650, 1133, 1673
NmuCI GTSAC 3 cut(s) 609, 919, 1115
NsbI TGCGCA 1 cut(s) 146
NsiI ATGCAT 1 cut(s) 1760
NspI RCATGY 2 cut(s) 412, 1762
PagI TCATGA 1 cut(s) 175
PaqCI CACCTGC 1 cut(s) 1226
PciSI GCTCTTC 2 cut(s) 1446, 1481
PctI GAATGC 2 cut(s) 1015, 1900
PdiI GCCGGC 1 cut(s) 1397
PdmI GAANNNNTTC 1 cut(s) 50
PfeI GAWTC 2 cut(s) 362, 1033
PkrI GCNGC 9 cut(s) 397, 407, 719, 748, 808, 882, 1015, 1180, 1602
PleI GAGTC 2 cut(s) 1542, 1826
PmaCI CACGTG 1 cut(s) 1115
PmlI CACGTG 1 cut(s) 1115
PpsI GAGTC 2 cut(s) 1542, 1826
Ppu21I YACGTR 1 cut(s) 1115
PpuMI RGGWCCY 1 cut(s) 1131
PsiI TTATAA 2 cut(s) 422, 636
Psp124BI GAGCTC 2 cut(s) 548, 1648
Psp5II RGGWCCY 1 cut(s) 1131
Psp6I CCWGG 5 cut(s) 503, 566, 651, 667, 1813
PspCI CACGTG 1 cut(s) 1115
PspGI CCWGG 5 cut(s) 503, 566, 651, 667, 1813
PspN4I GGNNCC 4 cut(s) 311, 650, 1133, 1673
PspPI GGNCC 5 cut(s) 434, 679, 733, 1131, 1672
PspPPI RGGWCCY 1 cut(s) 1131
PsuI RGATCY 3 cut(s) 1655, 1769, 1787
RsaI GTAC 6 cut(s) 36, 160, 650, 788, 1525, 1548
RsaNI GTAC 6 cut(s) 35, 159, 649, 787, 1524, 1547
RseI CAYNNNNRTG 1 cut(s) 926
SacI GAGCTC 2 cut(s) 548, 1648
SalI GTCGAC 1 cut(s) 1536
SapI GCTCTTC 2 cut(s) 1446, 1481
SaqAI TTAA 8 cut(s) 350, 555, 825, 1082, 1620, 1638, 1934, 1990
SatI GCNGC 9 cut(s) 396, 406, 718, 747, 807, 881, 1014, 1179, 1601
Sau3AI GATC 8 cut(s) 294, 561, 852, 1345, 1655, 1688, 1769, 1787
Sau96I GGNCC 5 cut(s) 434, 679, 733, 1131, 1672
SchI GAGTC 2 cut(s) 1543, 1826
ScrFI CCNGG 5 cut(s) 505, 568, 653, 669, 1815
SduI GDGCHC 4 cut(s) 416, 548, 1326, 1648
SexAI ACCWGGT 1 cut(s) 651
SfaNI GCATC 4 cut(s) 365, 928, 1288, 1711
SfcI CTRYAG 2 cut(s) 96, 1446
SinI GGWCC 3 cut(s) 434, 679, 1131
SmiMI CAYNNNNRTG 1 cut(s) 926
SmlI CTYRAG 3 cut(s) 643, 739, 1367
SmoI CTYRAG 3 cut(s) 643, 739, 1367
SsiI CCGC 6 cut(s) 406, 682, 749, 1178, 1181, 1230
SspI AATATT 1 cut(s) 513
SspMI CTAG 5 cut(s) 210, 438, 962, 1668, 1767
SstI GAGCTC 2 cut(s) 548, 1648
StyD4I CCNGG 5 cut(s) 503, 566, 651, 667, 1813
StyI CCWWGG 3 cut(s) 209, 1164, 1550
TaaI ACNGT 8 cut(s) 31, 97, 698, 821, 849, 952, 1079, 1546
TaiI ACGT 2 cut(s) 225, 1117
TaqI TCGA 3 cut(s) 1537, 1648, 1778
TaqII GACCGA 1 cut(s) 887
TatI WGTACW 1 cut(s) 1523
TauI GCSGC 2 cut(s) 408, 1181
TfiI GAWTC 2 cut(s) 362, 1033
Tru1I TTAA 8 cut(s) 350, 555, 825, 1082, 1620, 1638, 1934, 1990
Tru9I TTAA 8 cut(s) 350, 555, 825, 1082, 1620, 1638, 1934, 1990
TscAI CASTG 2 cut(s) 957, 1470
TseFI GTSAC 3 cut(s) 609, 919, 1115
TseI GCWGC 7 cut(s) 395, 717, 746, 806, 880, 1013, 1600
Tsp45I GTSAC 3 cut(s) 609, 919, 1115
TspGWI ACGGA 2 cut(s) 119, 938
TspRI CASTG 2 cut(s) 957, 1470
VneI GTGCAC 1 cut(s) 412
VpaK11BI GGWCC 3 cut(s) 434, 679, 1131
XapI RAATTY 3 cut(s) 169, 1311, 1556
XbaI TCTAGA 1 cut(s) 1766
XceI RCATGY 2 cut(s) 412, 1762
XcmI CCANNNNNNNNNTGG 2 cut(s) 233, 574
XmaJI CCTAGG 1 cut(s) 209
XmiI GTMKAC 5 cut(s) 1141, 1242, 1332, 1537, 1736
XmnI GAANNNNTTC 1 cut(s) 50
XspI CTAG 5 cut(s) 210, 438, 962, 1668, 1767
ZraI GACGTC 1 cut(s) 223
Zsp2I ATGCAT 1 cut(s) 1760
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.