FvH4_6g37740

Involved in the biogenesis of the 60S ribosomal subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0001573
Physical Location & Seq
Reverse (-)
29719475 .. 29722338
2864 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g37740.t1

Sequence Viewer

Length: 2013 bp
ATGGTGCAATATAATTTCAAGAGGATGACTGTTGTCCCCAGTGGGAAGGACTTGATTGATATTATCCTGTCTCGTACCCAGCGGCAGACCCCAACTGTAGTCCACAAGGGTTATGACATTAATCGCCTGCGTCAGTTTTATATGCGCAAGGTGAAATACACCCAGACTAATTTTCATGACAAGCTCTCTGCTATCATTGATGAATTTCCTAGGCTGGATGACATCCACCCTTTCTATGGCGATCTCCTAAATGTTCTCTACAACAAGGACCATTACAAGCTCGCGCTCGGTCAGATCAACACTGCCAGGAACCTTATTTCCAAGATTGCTAACGATTATGTCAAGTTGCTCAAGTATGGCGATTCGCTTTACCGATGCAAGAGTCTCAAGCGTGCTGCGCTTGGCCGTATGCAAACGGTTATAAGGAGGATTGGCCCTAGTTTAGCTTATCTGGAAGATATCAGGCAACACATGGCAAGGCTTCCTTCAATTGACCCAAACAGCCGGACGATATTGATTTGCGGCTATCCAAATGTTGGAAAGAGTTCATTCATCAACAAGATCACTAGGGCCGATGTTGATGTCCAGCCTTATGCTAATACTACTAGGTCACTATTTGTGGGGCATACAGATTACAAGTTCTTGAGGTACCAGGTTATTGATACACCTGGGATTTTGGACCGGCCATTTGAAGACCGTAACATCATTGAGATGTGCTGCATCACAGCATTGGCACATTTGAGAGCTGCTGTTTTGTTCTTCTTGGACATATCAGGTTCTTGCGGTTATACCATTGCCCAACAAGCTGCCCTTTTTCACAGCATTAAGCCTCTCTTCATGAACAAGCCATTGATTATTGTCTGCAACAAGACTGACTTGCAGCCATTGGAGGGCATTTCCGAGGAAGACATGAAGTTGGTTACAGAGATGAAATCTGAAGCTATGAAGACTGTGATTGGTCAAGAAGGCGATGCGCTCTTGACCATGAGCACCTTGACCGAGGACGGGGTTATTTCTGTAAAGAATGCAGCTTGTGAGAGGTTATTGAATCAGAGAGTTGAGCTGAAGATGAAATCTAAAAAGATGAATGATTGTTTAAATCGTTTTCATGTTGCGATGCCAAAACCACGTGATCACAAGGAGAGGCCTGTATGTATACCTCAGGCTGTTTTAGAAGCCCGGGCTAAGCAAGCAGCAGAGAAGGAAAAGAGACCTACTGAGAAGGATTTGGAGAATGAAAATGGTGGTGCAGGTGTATACTCTGCAAGTTTGAAGAAGAATTATATCCTAGCTCATGACGAGTGGAAAGAGGATATCATGCCTGAAATTCTTGACGGGCACAACGTCTTTGACTTTGTTGATCCTGATATTTTAATCAAGCTTGAGGAGTTAAAACAGGAAGAAGGAATCAGGCAGGCTGAGGTGGATGATGATGTTGAAATGAGTGGAACTGAGTTGAGTCCAGAAGAGTCGAAGAAATTGGCTGAGATAAGGGAAAAGAAAAGACTGCTGATTCAACAACATAGAATCAAGAAAAGTACAGCGGAGAGTCGACCAACAGTGCCTAGGAAATTTGACAAGGACAGGGAGTTCACATCAAGGAGAATTGGGAGGCAGCTGTCAGCGTTGGGAATTGATCCTAGTATGGCAATTAACCGCGCCCGCAGCACATCTGTTTCTATGAGGGGCCGAAAGAGAGAGAGATCAGTTGATGACAAGGGTATTAATGAAGATGGTGCTGATCATATGGATGTGGATACAGTCAAGAAGAAGTTGCGCTCGATGTCTAGACCTCGTTCAAGGTCTAGATCAAGGCTCCCTACTGATGTTGTCCGTGGTGATGGCTTTAAGGACTCTGATCAAAAGTCTAAAGCACTACACAAGGCCCGGAAATCTGTGAAGAACAGAAACAAGAATGCTAGACGTGGAGAGGCAGATAGAGTTGTTCCCAATTTGAAACCAAAACATTTGTTCTCTGGTAAACGCTCAAATGGAAAGACACAAAGGCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
MMR_HSR1 NOG1 NOGCT

Protein Analysis

671

Amino Acids

76.65

Weight (kDa)

9.64

Isoelectric Point (pI)

45.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NOG1_N PF17835 6 - 165 1.1e-59 NOG1 N-terminal helical domain
FeoB_N PF02421 170 - 318 2.7e-09 Ferrous iron transport protein B
MMR_HSR1 PF01926 171 - 290 3.8e-17 50S ribosome-binding GTPase
NOG1 PF06858 236 - 292 2.1e-24 Nucleolar GTP-binding protein 1 (NOG1)
NOGCT PF08155 404 - 457 2.3e-26 NOGCT (NUC087) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 422
AarI CACCTGC 1 cut(s) 1241
Acc16I TGCGCA 1 cut(s) 146
Acc36I ACCTGC 1 cut(s) 1241
Acc65I GGTACC 1 cut(s) 648
AccB1I GGYRCC 1 cut(s) 648
AccB7I CCANNNNNTGG 1 cut(s) 536
AccI GTMKAC 3 cut(s) 1156, 1257, 1552
AccII CGCG 2 cut(s) 284, 1659
AciI CCGC 6 cut(s) 82, 522, 783, 1544, 1657, 1663
AclWI GGATC 2 cut(s) 1355, 1631
AcoI YGGCCR 2 cut(s) 403, 683
AcsI RAATTY 3 cut(s) 203, 1326, 1571
AcuI CTGAAG 2 cut(s) 957, 1085
AcvI CACGTG 1 cut(s) 1130
AfaI GTAC 3 cut(s) 76, 650, 1540
AfiI CCNNNNNNNGG 4 cut(s) 236, 536, 890, 1005
AgsI TTSAA 9 cut(s) 19, 489, 692, 1048, 1273, 1439, 1517, 1800, 1957
AjiI CACGTC 1 cut(s) 1925
AjnI CCWGG 3 cut(s) 305, 651, 667
AloI GAACNNNNNNTCC 4 cut(s) 302, 334, 1574, 1606
Alw21I GWGCWC 1 cut(s) 992
Alw26I GTCTC 3 cut(s) 75, 389, 1204
AlwI GGATC 2 cut(s) 1355, 1631
Ama87I CYCGRG 1 cut(s) 1179
AoxI GGCC 7 cut(s) 403, 433, 570, 683, 1145, 1687, 1884
ApeKI GCWGC 9 cut(s) 395, 717, 746, 806, 880, 1028, 1193, 1615, 1665
ApoI RAATTY 3 cut(s) 203, 1326, 1571
ArsI GACNNNNNNTTYG 2 cut(s) 671, 703
AseI ATTAAT 2 cut(s) 120, 1725
Asp700I GAANNNNTTC 1 cut(s) 544
Asp718I GGTACC 1 cut(s) 648
AspA2I CCTAGG 2 cut(s) 209, 1565
AspLEI GCGC 7 cut(s) 147, 286, 400, 976, 1661, 1779, 2010
AspS9I GGNCC 6 cut(s) 268, 434, 570, 679, 1687, 1885
AsuC2I CCSGG 3 cut(s) 1180, 1181, 1888
AsuHPI GGTGA 2 cut(s) 163, 1850
AvaI CYCGRG 1 cut(s) 1179
AvaII GGWCC 2 cut(s) 268, 679
AvrII CCTAGG 2 cut(s) 209, 1565
AxyI CCTNAGG 1 cut(s) 1161
BaeGI GKGCMC 1 cut(s) 1341
BanI GGYRCC 1 cut(s) 648
BbrPI CACGTG 1 cut(s) 1130
BbsI GAAGAC 3 cut(s) 699, 912, 953
Bbv12I GWGCWC 1 cut(s) 992
BbvCI CCTCAGC 1 cut(s) 1419
BbvI GCAGC 9 cut(s) 382, 704, 733, 793, 892, 1040, 1205, 1627, 1677
BccI CCATC 2 cut(s) 1727, 1835
BceAI ACGGC 1 cut(s) 390
BciT130I CCWGG 3 cut(s) 307, 653, 669
BciVI GTATCC 1 cut(s) 1750
BclI TGATCA 3 cut(s) 1132, 1741, 1858
BcnI CCSGG 3 cut(s) 1180, 1181, 1888
BcoDI GTCTC 3 cut(s) 75, 389, 1204
BfmI CTRYAG 1 cut(s) 96
BfoI RGCGCY 1 cut(s) 2011
BfuAI ACCTGC 1 cut(s) 1241
BfuI GTATCC 1 cut(s) 1750
BlnI CCTAGG 2 cut(s) 209, 1565
BlpI GCTNAGC 1 cut(s) 1185
Bme1390I CCNGG 6 cut(s) 307, 653, 669, 1180, 1181, 1888
Bme18I GGWCC 2 cut(s) 268, 679
BmeT110I CYCGRG 1 cut(s) 1179
BmgBI CACGTC 1 cut(s) 1925
BmgT120I GGNCC 6 cut(s) 268, 434, 570, 679, 1687, 1885
BmiI GGNNCC 4 cut(s) 311, 650, 1688, 1817
BmrFI CCNGG 6 cut(s) 307, 653, 669, 1180, 1181, 1888
BmrI ACTGGG 1 cut(s) 33
BmsI GCATC 4 cut(s) 365, 729, 961, 1107
BmuI ACTGGG 1 cut(s) 33
BoxI GACNNNNGTC 1 cut(s) 32
BpiI GAAGAC 3 cut(s) 699, 912, 953
Bpu10I CCTNAGC 1 cut(s) 1419
Bpu1102I GCTNAGC 1 cut(s) 1185
BpuEI CTTGAG 4 cut(s) 335, 371, 664, 1403
BpuMI CCSGG 3 cut(s) 1180, 1181, 1888
BsaAI YACGTR 1 cut(s) 1130
BsaI GGTCTC 1 cut(s) 1204
BsaJI CCNNGG 7 cut(s) 209, 668, 900, 999, 1179, 1565, 1834
Bsc4I CCNNNNNNNGG 4 cut(s) 236, 536, 890, 1005
Bse118I RCCGGY 1 cut(s) 681
Bse1I ACTGG 1 cut(s) 39
Bse21I CCTNAGG 1 cut(s) 1161
Bse3DI GCAATG 1 cut(s) 792
BseBI CCWGG 3 cut(s) 307, 653, 669
BseDI CCNNGG 7 cut(s) 209, 668, 900, 999, 1179, 1565, 1834
BseGI GGATG 5 cut(s) 30, 222, 223, 1432, 1756
BseLI CCNNNNNNNGG 4 cut(s) 236, 536, 890, 1005
BseMI GCAATG 1 cut(s) 792
BseMII CTCAG 5 cut(s) 1175, 1209, 1410, 1443, 1476
BseNI ACTGG 1 cut(s) 39
BseRI GAGGAG 1 cut(s) 1400
BseSI GKGCMC 1 cut(s) 1341
BseXI GCAGC 9 cut(s) 382, 704, 733, 793, 892, 1040, 1205, 1627, 1677
BseYI CCCAGC 1 cut(s) 78
BsgI GTGCAG 1 cut(s) 1269
Bsh1236I CGCG 2 cut(s) 284, 1659
BshFI GGCC 7 cut(s) 405, 435, 572, 685, 1147, 1689, 1886
BshNI GGYRCC 1 cut(s) 648
BsiHKAI GWGCWC 1 cut(s) 992
BsiHKCI CYCGRG 1 cut(s) 1179
BsiSI CCGG 4 cut(s) 505, 682, 1180, 1888
BslFI GGGAC 1 cut(s) 20
BslI CCNNNNNNNGG 4 cut(s) 236, 536, 890, 1005
BsmAI GTCTC 3 cut(s) 75, 389, 1204
BsmFI GGGAC 1 cut(s) 20
BsmI GAATGC 2 cut(s) 1030, 1921
BsnI GGCC 7 cut(s) 405, 435, 572, 685, 1147, 1689, 1886
Bso31I GGTCTC 1 cut(s) 1204
BsoBI CYCGRG 1 cut(s) 1179
Bsp1286I GDGCHC 2 cut(s) 992, 1341
Bsp1720I GCTNAGC 1 cut(s) 1185
BspACI CCGC 6 cut(s) 82, 522, 783, 1544, 1657, 1663
BspANI GGCC 7 cut(s) 405, 435, 572, 685, 1147, 1689, 1886
BspCNI CTCAG 5 cut(s) 1174, 1210, 1411, 1444, 1477
BspFNI CGCG 2 cut(s) 284, 1659
BspHI TCATGA 3 cut(s) 175, 837, 1294
BspLI GGNNCC 4 cut(s) 311, 650, 1688, 1817
BspMI ACCTGC 1 cut(s) 1241
BspPI GGATC 2 cut(s) 1355, 1631
BspT107I GGYRCC 1 cut(s) 648
BspTNI GGTCTC 1 cut(s) 1204
BsrDI GCAATG 1 cut(s) 792
BsrFI RCCGGY 1 cut(s) 681
BsrI ACTGG 1 cut(s) 39
BssAI RCCGGY 1 cut(s) 681
BssECI CCNNGG 7 cut(s) 209, 668, 900, 999, 1179, 1565, 1834
BssNAI GTATAC 2 cut(s) 1157, 1258
BssT1I CCWWGG 2 cut(s) 209, 1565
Bst1107I GTATAC 2 cut(s) 1157, 1258
Bst2UI CCWGG 3 cut(s) 307, 653, 669
Bst4CI ACNGT 7 cut(s) 31, 97, 418, 698, 952, 1561, 1762
Bst6I CTCTTC 2 cut(s) 839, 1461
BstBAI YACGTR 1 cut(s) 1130
BstC8I GCNNGC 6 cut(s) 128, 282, 393, 1191, 1416, 1663
BstDEI CTNAG 6 cut(s) 1161, 1185, 1218, 1419, 1452, 1485
BstDSI CCRYGG 1 cut(s) 1834
BstF5I GGATG 5 cut(s) 30, 222, 223, 1432, 1756
BstFNI CGCG 2 cut(s) 284, 1659
BstH2I RGCGCY 1 cut(s) 2011
BstHHI GCGC 7 cut(s) 147, 286, 400, 976, 1661, 1779, 2010
BstMAI GTCTC 3 cut(s) 75, 389, 1204
BstMWI GCNNNNNNNGC 4 cut(s) 397, 803, 1190, 1665
BstNI CCWGG 3 cut(s) 307, 653, 669
BstPAI GACNNNNGTC 1 cut(s) 32
BstSCI CCNGG 6 cut(s) 305, 651, 667, 1178, 1179, 1886
BstSFI CTRYAG 1 cut(s) 96
BstSLI GKGCMC 1 cut(s) 1341
BstUI CGCG 2 cut(s) 284, 1659
BstV1I GCAGC 9 cut(s) 382, 704, 733, 793, 892, 1040, 1205, 1627, 1677
BstV2I GAAGAC 3 cut(s) 699, 912, 953
BstZ17I GTATAC 2 cut(s) 1157, 1258
Bsu36I CCTNAGG 1 cut(s) 1161
BsuI GTATCC 1 cut(s) 1750
BsuRI GGCC 7 cut(s) 405, 435, 572, 685, 1147, 1689, 1886
BtgI CCRYGG 1 cut(s) 1834
BtgZI GCGATG 2 cut(s) 984, 1130
BtrI CACGTC 1 cut(s) 1925
BtsCI GGATG 5 cut(s) 30, 222, 223, 1432, 1756
BtsI GCAGTG 1 cut(s) 300
BtsIMutI CAGTG 3 cut(s) 46, 300, 1566
BveI ACCTGC 1 cut(s) 1241
Cac8I GCNNGC 6 cut(s) 128, 282, 393, 1191, 1416, 1663
CciI TCATGA 3 cut(s) 175, 837, 1294
CfoI GCGC 7 cut(s) 147, 286, 400, 976, 1661, 1779, 2010
Cfr10I RCCGGY 1 cut(s) 681
Cfr13I GGNCC 6 cut(s) 268, 434, 570, 679, 1687, 1885
Cfr9I CCCGGG 1 cut(s) 1179
CseI GACGC 1 cut(s) 119
CsiI ACCWGGT 1 cut(s) 651
Csp6I GTAC 3 cut(s) 75, 649, 1539
CviAII CATG 8 cut(s) 176, 472, 838, 910, 985, 1109, 1295, 1318
CviQI GTAC 3 cut(s) 75, 649, 1539
DdeI CTNAG 6 cut(s) 1161, 1185, 1218, 1419, 1452, 1485
DraI TTTAAA 1 cut(s) 1098
EaeI YGGCCR 2 cut(s) 403, 683
Eam1104I CTCTTC 2 cut(s) 839, 1461
EarI CTCTTC 2 cut(s) 839, 1461
Eco130I CCWWGG 2 cut(s) 209, 1565
Eco147I AGGCCT 1 cut(s) 1147
Eco31I GGTCTC 1 cut(s) 1204
Eco32I GATATC 2 cut(s) 460, 1315
Eco47I GGWCC 2 cut(s) 268, 679
Eco57I CTGAAG 2 cut(s) 957, 1085
Eco72I CACGTG 1 cut(s) 1130
Eco81I CCTNAGG 1 cut(s) 1161
Eco88I CYCGRG 1 cut(s) 1179
EcoRII CCWGG 3 cut(s) 305, 651, 667
EcoRV GATATC 2 cut(s) 460, 1315
EcoT14I CCWWGG 2 cut(s) 209, 1565
ErhI CCWWGG 2 cut(s) 209, 1565
FaeI CATG 8 cut(s) 179, 475, 841, 913, 988, 1112, 1298, 1321
FalI AAGNNNNNCTT 8 cut(s) 469, 501, 795, 827, 818, 850, 860, 892
FaqI GGGAC 1 cut(s) 20
FatI CATG 8 cut(s) 175, 471, 837, 909, 984, 1108, 1294, 1317
FauI CCCGC 1 cut(s) 1670
FauNDI CATATG 1 cut(s) 1746
FbaI TGATCA 3 cut(s) 1132, 1741, 1858
FblI GTMKAC 3 cut(s) 1156, 1257, 1552
FokI GGATG 5 cut(s) 37, 209, 230, 1439, 1763
FspI TGCGCA 1 cut(s) 146
GlaI GCGC 7 cut(s) 146, 285, 399, 975, 1660, 1778, 2009
GsaI CCCAGC 1 cut(s) 82
HaeII RGCGCY 1 cut(s) 2011
HaeIII GGCC 7 cut(s) 405, 435, 572, 685, 1147, 1689, 1886
HapII CCGG 4 cut(s) 505, 682, 1180, 1888
HgaI GACGC 1 cut(s) 119
HhaI GCGC 7 cut(s) 147, 286, 400, 976, 1661, 1779, 2010
Hin1II CATG 8 cut(s) 179, 475, 841, 913, 988, 1112, 1298, 1321
Hin6I GCGC 7 cut(s) 145, 284, 398, 974, 1659, 1777, 2008
HinP1I GCGC 7 cut(s) 145, 284, 398, 974, 1659, 1777, 2008
HincII GTYRAC 1 cut(s) 1553
HindII GTYRAC 1 cut(s) 1553
HindIII AAGCTT 1 cut(s) 1379
HpaII CCGG 4 cut(s) 505, 682, 1180, 1888
HphI GGTGA 2 cut(s) 163, 1850
Hpy166II GTNNAC 6 cut(s) 103, 1157, 1258, 1553, 1593, 1982
Hpy188I TCNGA 5 cut(s) 294, 901, 937, 1053, 1858
Hpy8I GTNNAC 6 cut(s) 103, 1157, 1258, 1553, 1593, 1982
HpyAV CCTTC 6 cut(s) 40, 495, 959, 1195, 1216, 1397
HpyCH4III ACNGT 7 cut(s) 31, 97, 418, 698, 952, 1561, 1762
HpyCH4IV ACGT 3 cut(s) 1129, 1344, 1924
HpyCH4V TGCA 9 cut(s) 7, 378, 412, 720, 864, 880, 1028, 1250, 1265
HpyF10VI GCNNNNNNNGC 4 cut(s) 397, 803, 1190, 1665
HpyF3I CTNAG 6 cut(s) 1161, 1185, 1218, 1419, 1452, 1485
HpySE526I ACGT 3 cut(s) 1129, 1344, 1924
Hsp92II CATG 8 cut(s) 179, 475, 841, 913, 988, 1112, 1298, 1321
HspAI GCGC 7 cut(s) 145, 284, 398, 974, 1659, 1777, 2008
KpnI GGTACC 1 cut(s) 652
Ksp22I TGATCA 3 cut(s) 1132, 1741, 1858
LmnI GCTCC 1 cut(s) 1821
Lsp1109I GCAGC 9 cut(s) 382, 704, 733, 793, 892, 1040, 1205, 1627, 1677
LweI GCATC 4 cut(s) 365, 729, 961, 1107
MabI ACCWGGT 1 cut(s) 651
MaeII ACGT 3 cut(s) 1129, 1344, 1924
MaeIII GTNAC 3 cut(s) 609, 698, 919
MfeI CAATTG 1 cut(s) 489
MhlI GDGCHC 2 cut(s) 992, 1341
MlyI GAGTC 5 cut(s) 391, 1468, 1478, 1558, 1847
MmeI TCCRAC 1 cut(s) 517
MroXI GAANNNNTTC 1 cut(s) 544
MseI TTAA 8 cut(s) 120, 825, 1097, 1373, 1391, 1653, 1725, 1848
MslI CAYNNNNRTG 2 cut(s) 710, 1749
MspA1I CMGCKG 3 cut(s) 82, 1544, 1618
MspI CCGG 4 cut(s) 505, 682, 1180, 1888
MspR9I CCNGG 6 cut(s) 307, 653, 669, 1180, 1181, 1888
MunI CAATTG 1 cut(s) 489
Mva1269I GAATGC 2 cut(s) 1030, 1921
MvaI CCWGG 3 cut(s) 307, 653, 669
MvnI CGCG 2 cut(s) 284, 1659
MwoI GCNNNNNNNGC 4 cut(s) 397, 803, 1190, 1665
NciI CCSGG 3 cut(s) 1180, 1181, 1888
NdeI CATATG 1 cut(s) 1746
NlaIII CATG 8 cut(s) 179, 475, 841, 913, 988, 1112, 1298, 1321
NlaIV GGNNCC 4 cut(s) 311, 650, 1688, 1817
NmuCI GTSAC 1 cut(s) 609
NsbI TGCGCA 1 cut(s) 146
PagI TCATGA 3 cut(s) 175, 837, 1294
PaqCI CACCTGC 1 cut(s) 1241
PceI AGGCCT 1 cut(s) 1147
PcsI WCGNNNNNNNCGW 1 cut(s) 1341
PctI GAATGC 2 cut(s) 1030, 1921
PdmI GAANNNNTTC 1 cut(s) 544
PfeI GAWTC 5 cut(s) 362, 1048, 1407, 1513, 1527
PflMI CCANNNNNTGG 1 cut(s) 536
PleI GAGTC 5 cut(s) 390, 1467, 1477, 1557, 1847
PmaCI CACGTG 1 cut(s) 1130
PmlI CACGTG 1 cut(s) 1130
PpsI GAGTC 5 cut(s) 390, 1467, 1477, 1557, 1847
Ppu21I YACGTR 1 cut(s) 1130
PshAI GACNNNNGTC 1 cut(s) 32
PshBI ATTAAT 2 cut(s) 120, 1725
PsiI TTATAA 1 cut(s) 422
Psp6I CCWGG 3 cut(s) 305, 651, 667
PspCI CACGTG 1 cut(s) 1130
PspFI CCCAGC 1 cut(s) 78
PspGI CCWGG 3 cut(s) 305, 651, 667
PspN4I GGNNCC 4 cut(s) 311, 650, 1688, 1817
PspPI GGNCC 6 cut(s) 268, 434, 570, 679, 1687, 1885
PvuII CAGCTG 1 cut(s) 1618
RsaI GTAC 3 cut(s) 76, 650, 1540
RsaNI GTAC 3 cut(s) 75, 649, 1539
RseI CAYNNNNRTG 2 cut(s) 710, 1749
SalI GTCGAC 1 cut(s) 1551
SaqAI TTAA 8 cut(s) 120, 825, 1097, 1373, 1391, 1653, 1725, 1848
Sau96I GGNCC 6 cut(s) 268, 434, 570, 679, 1687, 1885
SchI GAGTC 5 cut(s) 391, 1468, 1478, 1558, 1847
ScrFI CCNGG 6 cut(s) 307, 653, 669, 1180, 1181, 1888
SduI GDGCHC 2 cut(s) 992, 1341
SexAI ACCWGGT 1 cut(s) 651
SfaNI GCATC 4 cut(s) 365, 729, 961, 1107
SfcI CTRYAG 1 cut(s) 96
SinI GGWCC 2 cut(s) 268, 679
SmaI CCCGGG 1 cut(s) 1181
SmiMI CAYNNNNRTG 2 cut(s) 710, 1749
SmlI CTYRAG 4 cut(s) 350, 386, 643, 1382
SmoI CTYRAG 4 cut(s) 350, 386, 643, 1382
SrfI GCCCGGGC 1 cut(s) 1181
SseBI AGGCCT 1 cut(s) 1147
SsiI CCGC 6 cut(s) 82, 522, 783, 1544, 1657, 1663
StuI AGGCCT 1 cut(s) 1147
StyD4I CCNGG 6 cut(s) 305, 651, 667, 1178, 1179, 1886
StyI CCWWGG 2 cut(s) 209, 1565
TaaI ACNGT 7 cut(s) 31, 97, 418, 698, 952, 1561, 1762
TaiI ACGT 3 cut(s) 1132, 1347, 1927
TaqI TCGA 3 cut(s) 1472, 1552, 1781
TaqII GACCGA 2 cut(s) 278, 1013
TatI WGTACW 1 cut(s) 1538
TauI GCSGC 2 cut(s) 85, 525
TfiI GAWTC 5 cut(s) 362, 1048, 1407, 1513, 1527
Tru1I TTAA 8 cut(s) 120, 825, 1097, 1373, 1391, 1653, 1725, 1848
Tru9I TTAA 8 cut(s) 120, 825, 1097, 1373, 1391, 1653, 1725, 1848
TscAI CASTG 3 cut(s) 46, 307, 1566
TseFI GTSAC 1 cut(s) 609
TseI GCWGC 9 cut(s) 395, 717, 746, 806, 880, 1028, 1193, 1615, 1665
Tsp45I GTSAC 1 cut(s) 609
TspGWI ACGGA 1 cut(s) 1823
TspMI CCCGGG 1 cut(s) 1179
TspRI CASTG 3 cut(s) 46, 307, 1566
Van91I CCANNNNNTGG 1 cut(s) 536
VpaK11BI GGWCC 2 cut(s) 268, 679
VspI ATTAAT 2 cut(s) 120, 1725
XapI RAATTY 3 cut(s) 203, 1326, 1571
XbaI TCTAGA 2 cut(s) 1787, 1805
XcmI CCANNNNNNNNNTGG 1 cut(s) 233
XmaI CCCGGG 1 cut(s) 1179
XmaJI CCTAGG 2 cut(s) 209, 1565
XmiI GTMKAC 3 cut(s) 1156, 1257, 1552
XmnI GAANNNNTTC 1 cut(s) 544
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.