RLG00000034861

Involved in the biogenesis of the 60S ribosomal subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0001573
Physical Location & Seq
Forward (+)
56164857 .. 56167032
2176 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034861

Sequence Viewer

Length: 1872 bp
ATGGTGCAATATAATTTCAAGAAGATGACTGTTGTTCCCAGTGGGAAGGACTTCATTGATATTATCCTTTCTCGCACCCAGCGGCAGACCCCAACTGTAGTCCACAAGGGTTCTGCCATTGACCGCGTGCGTAAGTTCTATACGCGCAAAGTCAAACATACCCAAACAAATTTTCATGAGAAGCTCTCTACTATCATTGATGAATTTCCTAGGCTGGAAGACATCCACCCTTTCTACTGCGATCTTCGGCATGTTCTCTACAACAAGGACCACTACAAGCTCGCACTTGGTCAACTAAATACTGCAAGGAACCTGACTTCCAAGATTGCTAAAGATTATGTCAAGTTTTTGAAGTATGGTGATTCACTTTACCGATGCAAGAGTCTCAAGGTTGCTGCTCTTGGCCGTATGTGCACGGTTATAAAGAGGATTGGCCCTAGTTTAGCTTATCTAGAACGAATTAGGCAACACATGGCAAGGCTGCCTTCAATTGACCCAAACACCCGGACAATATTGATTTGCGGCTATCCCAATGTCGGAAAGAGTTCATTCATCAACAAGATCACCAGGGCCGATGTTGATGTCCAGCCTTATGCTTTTACTACAAAGTCACTCTTTGTGGGGCATACAGATTATAAGTTCTTGAGGTACCAGGTTATTGATACACCTGGGATTTTGGACCGACCATTTGAAGACCGGTCTTGTGGTTATACCATTGCCCAACAAGCTGCCCTTTTTCACAGCATTAAGTCTCTGTTCATGAGCAAACCATTGATTATAGTCTGCAACAAGACTGATTTGCAGCCATTGGAGGGCATATCTGAGGAAGACATGAAGTTGGTCACAGAGATGAAAGCTGAAGCTATGAAGACTGTGATTGGTCAAGGAGGTGAGGCTACGAATGATGATGGGAGAGTTGAGTTGAAGATGAAATCTACAAAGATAAATGATTGTTTAAATCGTTTTCATGTTGCGATGCCAAAGCCACGTGACCAAAAGGAAAGGCTTCCATGTATACCTCAGGCAGTTTTAGAAGCTAAGGCTAAGCAAGCAGCAGTGAAGGAAACGAGAACTACTGAAAAGGATTTGGAGAATGAAAATTGTGGTGCGGGTGTATACTCTGCCAGTTTGAAGAAGAATTATATCCTAGCTAATGATGAGTGGAAAGAGGATATCATACCTGAAATTCTTGATGGGCACAATGTATTCGACTTTGTTGATCCCGATATTTTGGATAGGCTTGAGGAGTTAAAACGAGAAGAAGGAATCATGCAGGCAGATGTGGATGATGATGCGGAGATGGGTGGAATGGAGTTGATTCCAGAAGAGCAGAAGACATTGGCTCAGATAAGGAAAAAGAAAAGCTTGCTGATTCAACAACATATAATCAAGAAAAGTACAGCGGAGAGTCGGCCTACAGTACCTAGGAAATTTGACAAGGACAGGGAGTTCACAACAAAGAGAATGGGGAGGCAGCTGTCAGAGTTGGGAATTGATCCTAGTATGGCAATTAACCGAGCCCGCAGCAGATCTCTCTCTAGGAGGGGCCGAAAGAGAGAGCGATCAGTTGACAAGGGTGATAGTGAAGGTGGTGGTGTCATGAATATGGATGTGGATACACTCAACAAGAAGCTGCGCTCCATGTCTAGACCCCATTCAAGGTCAAGATCAAGGCCGCCTATTGATGTTGTCCCTCGTGATGGCTTTAAGGACTCTGATCAAAAGTCTAAAGCACTAGACAAGTCCCGGAAATCTGTGAAGAACAGAAACAAGAATGCTAGACGTGGAGAGGCAGATAGAGTTACTCCCAATTTGAAACCTAAGCGCTTGTTATCTGGAAAACTATCAAATGGAAAAACCCAAAGGCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
MMR_HSR1 NOG1 NOGCT

Protein Analysis

624

Amino Acids

71.19

Weight (kDa)

9.71

Isoelectric Point (pI)

40.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NOG1_N PF17835 6 - 165 3.7e-56 NOG1 N-terminal helical domain
FeoB_N PF02421 170 - 226 1.7e-07 Ferrous iron transport protein B
MMR_HSR1 PF01926 171 - 263 2.6e-15 50S ribosome-binding GTPase
NOG1 PF06858 234 - 266 1.1e-09 Nucleolar GTP-binding protein 1 (NOG1)
NOGCT PF08155 357 - 410 3.3e-26 NOGCT (NUC087) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 422, 636
Acc65I GGTACC 1 cut(s) 648
AccB1I GGYRCC 1 cut(s) 648
AccI GTMKAC 2 cut(s) 1015, 1116
AccII CGCG 2 cut(s) 126, 145
AciI CCGC 8 cut(s) 82, 124, 522, 1109, 1295, 1403, 1522, 1676
AclWI GGATC 2 cut(s) 1214, 1490
AcoI YGGCCR 1 cut(s) 403
AcsI RAATTY 4 cut(s) 169, 203, 1185, 1430
AcuI CTGAAG 1 cut(s) 879
AcvI CACGTG 1 cut(s) 989
AfaI GTAC 3 cut(s) 650, 1399, 1422
AfeI AGCGCT 1 cut(s) 1826
AfiI CCNNNNNNNGG 4 cut(s) 536, 812, 1659, 1700
AgeI ACCGGT 1 cut(s) 696
AgsI TTSAA 9 cut(s) 19, 352, 489, 692, 925, 1132, 1376, 1659, 1816
AjiI CACGTC 1 cut(s) 1784
AjnI CCWGG 3 cut(s) 566, 651, 667
AjuI GAANNNNNNNTTGG 2 cut(s) 156, 188
AloI GAACNNNNNNTCC 4 cut(s) 302, 334, 1433, 1465
Alw21I GWGCWC 1 cut(s) 416
Alw26I GTCTC 2 cut(s) 389, 756
Alw44I GTGCAC 1 cut(s) 412
AlwI GGATC 2 cut(s) 1214, 1490
Aor51HI AGCGCT 1 cut(s) 1826
AoxI GGCC 6 cut(s) 403, 433, 570, 1412, 1546, 1673
ApaLI GTGCAC 1 cut(s) 412
ApeKI GCWGC 8 cut(s) 395, 481, 728, 802, 1052, 1474, 1524, 1633
ApoI RAATTY 4 cut(s) 169, 203, 1185, 1430
ArsI GACNNNNNNTTYG 2 cut(s) 671, 703
AsiGI ACCGGT 1 cut(s) 696
Asp700I GAANNNNTTC 3 cut(s) 50, 544, 1005
Asp718I GGTACC 1 cut(s) 648
AspA2I CCTAGG 2 cut(s) 209, 1424
AspLEI GCGC 4 cut(s) 147, 1638, 1827, 1869
AspS9I GGNCC 5 cut(s) 268, 434, 570, 679, 1546
AsuC2I CCSGG 2 cut(s) 505, 1747
AsuHPI GGTGA 4 cut(s) 371, 556, 902, 1589
AvaII GGWCC 2 cut(s) 268, 679
AvrII CCTAGG 2 cut(s) 209, 1424
AxyI CCTNAGG 1 cut(s) 1020
BaeGI GKGCMC 2 cut(s) 416, 1200
BanI GGYRCC 1 cut(s) 648
BanII GRGCYC 1 cut(s) 1522
BauI CACGAG 1 cut(s) 1695
BbrPI CACGTG 1 cut(s) 989
BbsI GAAGAC 5 cut(s) 225, 699, 834, 875, 1340
Bbv12I GWGCWC 1 cut(s) 416
BbvI GCAGC 8 cut(s) 382, 468, 715, 814, 1064, 1486, 1536, 1620
BccI CCATC 4 cut(s) 902, 1187, 1294, 1694
BceAI ACGGC 1 cut(s) 390
BciT130I CCWGG 3 cut(s) 568, 653, 669
BciVI GTATCC 1 cut(s) 1609
BclI TGATCA 1 cut(s) 1717
BcnI CCSGG 2 cut(s) 505, 1747
BcoDI GTCTC 2 cut(s) 389, 756
BfmI CTRYAG 2 cut(s) 96, 1416
BfoI RGCGCY 2 cut(s) 1828, 1870
BfuI GTATCC 1 cut(s) 1609
BglII AGATCT 1 cut(s) 1529
BlnI CCTAGG 2 cut(s) 209, 1424
BlpI GCTNAGC 1 cut(s) 1044
Bme1390I CCNGG 5 cut(s) 505, 568, 653, 669, 1747
Bme18I GGWCC 2 cut(s) 268, 679
BmgBI CACGTC 1 cut(s) 1784
BmgT120I GGNCC 5 cut(s) 268, 434, 570, 679, 1546
BmiI GGNNCC 3 cut(s) 311, 650, 1547
BmrFI CCNGG 5 cut(s) 505, 568, 653, 669, 1747
BmrI ACTGGG 1 cut(s) 33
BmsI GCATC 3 cut(s) 365, 966, 1282
BmuI ACTGGG 1 cut(s) 33
BpiI GAAGAC 5 cut(s) 225, 699, 834, 875, 1340
BplI GAGNNNNNCTC 2 cut(s) 170, 202
Bpu10I CCTNAGC 2 cut(s) 1038, 1821
Bpu1102I GCTNAGC 1 cut(s) 1044
BpuEI CTTGAG 3 cut(s) 371, 664, 1262
BpuMI CCSGG 2 cut(s) 505, 1747
BsaAI YACGTR 1 cut(s) 989
BsaJI CCNNGG 4 cut(s) 209, 567, 668, 1424
BsaWI WCCGGW 1 cut(s) 696
Bsc4I CCNNNNNNNGG 4 cut(s) 536, 812, 1659, 1700
Bse118I RCCGGY 1 cut(s) 696
Bse1I ACTGG 2 cut(s) 39, 1125
Bse21I CCTNAGG 1 cut(s) 1020
Bse3DI GCAATG 1 cut(s) 714
BseBI CCWGG 3 cut(s) 568, 653, 669
BseDI CCNNGG 4 cut(s) 209, 567, 668, 1424
BseGI GGATG 3 cut(s) 222, 1291, 1615
BseLI CCNNNNNNNGG 4 cut(s) 536, 812, 1659, 1700
BseMI GCAATG 1 cut(s) 714
BseMII CTCAG 3 cut(s) 813, 1034, 1358
BseNI ACTGG 2 cut(s) 39, 1125
BseRI GAGGAG 1 cut(s) 1259
BseSI GKGCMC 2 cut(s) 416, 1200
BseXI GCAGC 8 cut(s) 382, 468, 715, 814, 1064, 1486, 1536, 1620
BseYI CCCAGC 1 cut(s) 78
Bsh1236I CGCG 2 cut(s) 126, 145
BshFI GGCC 6 cut(s) 405, 435, 572, 1414, 1548, 1675
BshNI GGYRCC 1 cut(s) 648
BshTI ACCGGT 1 cut(s) 696
BsiHKAI GWGCWC 1 cut(s) 416
BsiSI CCGG 3 cut(s) 505, 697, 1747
BslFI GGGAC 2 cut(s) 1676, 1729
BslI CCNNNNNNNGG 4 cut(s) 536, 812, 1659, 1700
BsmAI GTCTC 2 cut(s) 389, 756
BsmFI GGGAC 2 cut(s) 1676, 1729
BsmI GAATGC 1 cut(s) 1780
BsnI GGCC 6 cut(s) 405, 435, 572, 1414, 1548, 1675
Bsp1286I GDGCHC 3 cut(s) 416, 1200, 1522
Bsp143I GATC 8 cut(s) 241, 561, 1219, 1495, 1529, 1562, 1667, 1717
Bsp1720I GCTNAGC 1 cut(s) 1044
BspACI CCGC 8 cut(s) 82, 124, 522, 1109, 1295, 1403, 1522, 1676
BspANI GGCC 6 cut(s) 405, 435, 572, 1414, 1548, 1675
BspCNI CTCAG 3 cut(s) 814, 1033, 1357
BspFNI CGCG 2 cut(s) 126, 145
BspHI TCATGA 3 cut(s) 175, 759, 1599
BspLI GGNNCC 3 cut(s) 311, 650, 1547
BspPI GGATC 2 cut(s) 1214, 1490
BspQI GCTCTTC 1 cut(s) 1320
BspT107I GGYRCC 1 cut(s) 648
BsrDI GCAATG 1 cut(s) 714
BsrFI RCCGGY 1 cut(s) 696
BsrI ACTGG 2 cut(s) 39, 1125
BssAI RCCGGY 1 cut(s) 696
BssECI CCNNGG 4 cut(s) 209, 567, 668, 1424
BssMI GATC 8 cut(s) 241, 561, 1219, 1495, 1529, 1562, 1667, 1717
BssNAI GTATAC 2 cut(s) 1016, 1117
BssSI CACGAG 1 cut(s) 1695
BssT1I CCWWGG 2 cut(s) 209, 1424
Bst1107I GTATAC 2 cut(s) 1016, 1117
Bst2BI CACGAG 1 cut(s) 1695
Bst2UI CCWGG 3 cut(s) 568, 653, 669
Bst4CI ACNGT 5 cut(s) 31, 97, 418, 874, 1420
Bst6I CTCTTC 1 cut(s) 1320
BstBAI YACGTR 1 cut(s) 989
BstC8I GCNNGC 6 cut(s) 128, 282, 1050, 1275, 1367, 1522
BstDEI CTNAG 6 cut(s) 822, 1020, 1038, 1044, 1344, 1821
BstF5I GGATG 3 cut(s) 222, 1291, 1615
BstFNI CGCG 2 cut(s) 126, 145
BstH2I RGCGCY 2 cut(s) 1828, 1870
BstHHI GCGC 4 cut(s) 147, 1638, 1827, 1869
BstKTI GATC 8 cut(s) 244, 564, 1222, 1498, 1532, 1565, 1670, 1720
BstMAI GTCTC 2 cut(s) 389, 756
BstMBI GATC 8 cut(s) 241, 561, 1219, 1495, 1529, 1562, 1667, 1717
BstMWI GCNNNNNNNGC 3 cut(s) 411, 725, 1049
BstNI CCWGG 3 cut(s) 568, 653, 669
BstNSI RCATGY 1 cut(s) 254
BstSCI CCNGG 5 cut(s) 503, 566, 651, 667, 1745
BstSFI CTRYAG 2 cut(s) 96, 1416
BstSLI GKGCMC 2 cut(s) 416, 1200
BstUI CGCG 2 cut(s) 126, 145
BstV1I GCAGC 8 cut(s) 382, 468, 715, 814, 1064, 1486, 1536, 1620
BstV2I GAAGAC 5 cut(s) 225, 699, 834, 875, 1340
BstX2I RGATCY 1 cut(s) 1529
BstYI RGATCY 1 cut(s) 1529
BstZ17I GTATAC 2 cut(s) 1016, 1117
Bsu36I CCTNAGG 1 cut(s) 1020
BsuI GTATCC 1 cut(s) 1609
BsuRI GGCC 6 cut(s) 405, 435, 572, 1414, 1548, 1675
BtgZI GCGATG 1 cut(s) 989
BtrI CACGTC 1 cut(s) 1784
BtsCI GGATG 3 cut(s) 222, 1291, 1615
BtsI GCAGTG 1 cut(s) 1062
BtsIMutI CAGTG 2 cut(s) 46, 1062
Cac8I GCNNGC 6 cut(s) 128, 282, 1050, 1275, 1367, 1522
CciI TCATGA 3 cut(s) 175, 759, 1599
CfoI GCGC 4 cut(s) 147, 1638, 1827, 1869
Cfr10I RCCGGY 1 cut(s) 696
Cfr13I GGNCC 5 cut(s) 268, 434, 570, 679, 1546
CsiI ACCWGGT 1 cut(s) 651
Csp6I GTAC 3 cut(s) 649, 1398, 1421
CspAI ACCGGT 1 cut(s) 696
CviQI GTAC 3 cut(s) 649, 1398, 1421
DdeI CTNAG 6 cut(s) 822, 1020, 1038, 1044, 1344, 1821
DpnI GATC 8 cut(s) 243, 563, 1221, 1497, 1531, 1564, 1669, 1719
DpnII GATC 8 cut(s) 241, 561, 1219, 1495, 1529, 1562, 1667, 1717
DraI TTTAAA 1 cut(s) 957
EaeI YGGCCR 1 cut(s) 403
Eam1104I CTCTTC 1 cut(s) 1320
EarI CTCTTC 1 cut(s) 1320
Eco130I CCWWGG 2 cut(s) 209, 1424
Eco24I GRGCYC 1 cut(s) 1522
Eco32I GATATC 1 cut(s) 1174
Eco47I GGWCC 2 cut(s) 268, 679
Eco47III AGCGCT 1 cut(s) 1826
Eco57I CTGAAG 1 cut(s) 879
Eco72I CACGTG 1 cut(s) 989
Eco81I CCTNAGG 1 cut(s) 1020
EcoRII CCWGG 3 cut(s) 566, 651, 667
EcoRV GATATC 1 cut(s) 1174
EcoT14I CCWWGG 2 cut(s) 209, 1424
EcoT38I GRGCYC 1 cut(s) 1522
ErhI CCWWGG 2 cut(s) 209, 1424
FalI AAGNNNNNCTT 8 cut(s) 469, 501, 599, 631, 717, 749, 1349, 1381
FaqI GGGAC 2 cut(s) 1676, 1729
FauI CCCGC 2 cut(s) 1102, 1529
FbaI TGATCA 1 cut(s) 1717
FblI GTMKAC 2 cut(s) 1015, 1116
FokI GGATG 3 cut(s) 209, 1298, 1622
FriOI GRGCYC 1 cut(s) 1522
GlaI GCGC 4 cut(s) 146, 1637, 1826, 1868
GsaI CCCAGC 1 cut(s) 82
HaeII RGCGCY 2 cut(s) 1828, 1870
HaeIII GGCC 6 cut(s) 405, 435, 572, 1414, 1548, 1675
HapII CCGG 3 cut(s) 505, 697, 1747
HhaI GCGC 4 cut(s) 147, 1638, 1827, 1869
Hin6I GCGC 4 cut(s) 145, 1636, 1825, 1867
HinP1I GCGC 4 cut(s) 145, 1636, 1825, 1867
HincII GTYRAC 2 cut(s) 293, 1570
HindII GTYRAC 2 cut(s) 293, 1570
HindIII AAGCTT 1 cut(s) 1363
HinfI GANTC 7 cut(s) 362, 382, 1266, 1318, 1372, 1408, 1712
HpaII CCGG 3 cut(s) 505, 697, 1747
HphI GGTGA 4 cut(s) 371, 556, 902, 1589
Hpy166II GTNNAC 7 cut(s) 103, 293, 414, 1016, 1117, 1452, 1570
Hpy188I TCNGA 5 cut(s) 539, 823, 1347, 1483, 1717
Hpy8I GTNNAC 7 cut(s) 103, 293, 414, 1016, 1117, 1452, 1570
HpyAV CCTTC 5 cut(s) 40, 495, 1054, 1256, 1580
HpyCH4III ACNGT 5 cut(s) 31, 97, 418, 874, 1420
HpyCH4IV ACGT 2 cut(s) 988, 1783
HpyCH4V TGCA 7 cut(s) 7, 305, 378, 414, 786, 802, 1273
HpyF10VI GCNNNNNNNGC 3 cut(s) 411, 725, 1049
HpyF3I CTNAG 6 cut(s) 822, 1020, 1038, 1044, 1344, 1821
HpySE526I ACGT 2 cut(s) 988, 1783
HspAI GCGC 4 cut(s) 145, 1636, 1825, 1867
KpnI GGTACC 1 cut(s) 652
Ksp22I TGATCA 1 cut(s) 1717
Kzo9I GATC 8 cut(s) 241, 561, 1219, 1495, 1529, 1562, 1667, 1717
LguI GCTCTTC 1 cut(s) 1320
LmnI GCTCC 1 cut(s) 1643
Lsp1109I GCAGC 8 cut(s) 382, 468, 715, 814, 1064, 1486, 1536, 1620
LweI GCATC 3 cut(s) 365, 966, 1282
MabI ACCWGGT 1 cut(s) 651
MaeII ACGT 2 cut(s) 988, 1783
MaeIII GTNAC 4 cut(s) 609, 841, 989, 1801
MalI GATC 8 cut(s) 243, 563, 1221, 1497, 1531, 1564, 1669, 1719
MboI GATC 8 cut(s) 241, 561, 1219, 1495, 1529, 1562, 1667, 1717
MfeI CAATTG 1 cut(s) 489
MflI RGATCY 1 cut(s) 1529
MhlI GDGCHC 3 cut(s) 416, 1200, 1522
MlyI GAGTC 3 cut(s) 391, 1417, 1706
MmeI TCCRAC 1 cut(s) 517
MroXI GAANNNNTTC 3 cut(s) 50, 544, 1005
MseI TTAA 5 cut(s) 747, 956, 1250, 1512, 1707
MslI CAYNNNNRTG 2 cut(s) 848, 1604
MspA1I CMGCKG 3 cut(s) 82, 1403, 1477
MspI CCGG 3 cut(s) 505, 697, 1747
MspR9I CCNGG 5 cut(s) 505, 568, 653, 669, 1747
MunI CAATTG 1 cut(s) 489
Mva1269I GAATGC 1 cut(s) 1780
MvaI CCWGG 3 cut(s) 568, 653, 669
MvnI CGCG 2 cut(s) 126, 145
MwoI GCNNNNNNNGC 3 cut(s) 411, 725, 1049
NciI CCSGG 2 cut(s) 505, 1747
NdeII GATC 8 cut(s) 241, 561, 1219, 1495, 1529, 1562, 1667, 1717
NlaIV GGNNCC 3 cut(s) 311, 650, 1547
NmuCI GTSAC 3 cut(s) 609, 841, 989
NspI RCATGY 1 cut(s) 254
PagI TCATGA 3 cut(s) 175, 759, 1599
PciSI GCTCTTC 1 cut(s) 1320
PctI GAATGC 1 cut(s) 1780
PdmI GAANNNNTTC 3 cut(s) 50, 544, 1005
PfeI GAWTC 4 cut(s) 362, 1266, 1318, 1372
PfoI TCCNGGA 1 cut(s) 1745
PinAI ACCGGT 1 cut(s) 696
PleI GAGTC 3 cut(s) 390, 1416, 1706
PmaCI CACGTG 1 cut(s) 989
PmlI CACGTG 1 cut(s) 989
PpsI GAGTC 3 cut(s) 390, 1416, 1706
Ppu21I YACGTR 1 cut(s) 989
PsiI TTATAA 2 cut(s) 422, 636
Psp6I CCWGG 3 cut(s) 566, 651, 667
PspCI CACGTG 1 cut(s) 989
PspFI CCCAGC 1 cut(s) 78
PspGI CCWGG 3 cut(s) 566, 651, 667
PspN4I GGNNCC 3 cut(s) 311, 650, 1547
PspPI GGNCC 5 cut(s) 268, 434, 570, 679, 1546
PsuI RGATCY 1 cut(s) 1529
PvuII CAGCTG 1 cut(s) 1477
RsaI GTAC 3 cut(s) 650, 1399, 1422
RsaNI GTAC 3 cut(s) 649, 1398, 1421
RseI CAYNNNNRTG 2 cut(s) 848, 1604
SapI GCTCTTC 1 cut(s) 1320
SaqAI TTAA 5 cut(s) 747, 956, 1250, 1512, 1707
Sau3AI GATC 8 cut(s) 241, 561, 1219, 1495, 1529, 1562, 1667, 1717
Sau96I GGNCC 5 cut(s) 268, 434, 570, 679, 1546
SchI GAGTC 3 cut(s) 391, 1417, 1706
ScrFI CCNGG 5 cut(s) 505, 568, 653, 669, 1747
SduI GDGCHC 3 cut(s) 416, 1200, 1522
SexAI ACCWGGT 1 cut(s) 651
SfaNI GCATC 3 cut(s) 365, 966, 1282
SfcI CTRYAG 2 cut(s) 96, 1416
SinI GGWCC 2 cut(s) 268, 679
SmiMI CAYNNNNRTG 2 cut(s) 848, 1604
SmlI CTYRAG 3 cut(s) 386, 643, 1241
SmoI CTYRAG 3 cut(s) 386, 643, 1241
SsiI CCGC 8 cut(s) 82, 124, 522, 1109, 1295, 1403, 1522, 1676
SspI AATATT 1 cut(s) 513
StyD4I CCNGG 5 cut(s) 503, 566, 651, 667, 1745
StyI CCWWGG 2 cut(s) 209, 1424
TaaI ACNGT 5 cut(s) 31, 97, 418, 874, 1420
TaiI ACGT 2 cut(s) 991, 1786
TaqI TCGA 1 cut(s) 1209
TaqII GACCGA 1 cut(s) 696
TatI WGTACW 1 cut(s) 1397
TauI GCSGC 3 cut(s) 85, 525, 1678
TfiI GAWTC 4 cut(s) 362, 1266, 1318, 1372
Tru1I TTAA 5 cut(s) 747, 956, 1250, 1512, 1707
Tru9I TTAA 5 cut(s) 747, 956, 1250, 1512, 1707
TscAI CASTG 2 cut(s) 46, 1062
TseFI GTSAC 3 cut(s) 609, 841, 989
TseI GCWGC 8 cut(s) 395, 481, 728, 802, 1052, 1474, 1524, 1633
Tsp45I GTSAC 3 cut(s) 609, 841, 989
TspRI CASTG 2 cut(s) 46, 1062
VneI GTGCAC 1 cut(s) 412
VpaK11BI GGWCC 2 cut(s) 268, 679
XapI RAATTY 4 cut(s) 169, 203, 1185, 1430
XbaI TCTAGA 2 cut(s) 451, 1646
XceI RCATGY 1 cut(s) 254
XmaJI CCTAGG 2 cut(s) 209, 1424
XmiI GTMKAC 2 cut(s) 1015, 1116
XmnI GAANNNNTTC 3 cut(s) 50, 544, 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.