pycom11g19650

Involved in the biogenesis of the 60S ribosomal subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0001573
Physical Location & Seq
Forward (+)
22197313 .. 22201318
4006 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g19650.1

Sequence Viewer

Length: 2346 bp
ATGGCGCATGAAGTGTGTAAAGTTCTCTGGTTATGTAAGTTGCTTTGGGGTCTTGGTTTCAAACCAAAAGGGGCGACAAAGTTGTATTGTGATAATAAGTCGACACGAGAAATTGCAGAGAATCCGCTGCAATATGACAGAATGAAGCATGTGGAAGTGGATCAACATTTCATTAAGGAAAAGTTCGAGAAGAAGATTGTGTCAATACCGTTTGTGAATTCAGAAGAGCAGCTTGCAAATATCCTCGCTCATGCCATGTGTAGTAGAGTTTTTGATGACTCACGTGTCAAGTTGGGGTGGAAACCATTTATCGGTTATGGCAGGTATAACTTTAAGAAGATGACTGTTGTACCAAATGGGAAGGACTTCATTGACATAATCCTATCTCGCACCCAGCGGCAGACCCCAACTGTAGTTCACAAGGGTTATGCAATTTCCCGCCTTCGTCAGTTCTATATGCGCAAGGTGAAATATACCCAACAGAATTTTCATGAGAAGCTCTCCACAATTATTGATGAATTTCCTAGGCTTGATGATATCCACCCTTTCTATGGCGACCTTCTTCATGTTCTCTACAACAAGGATCACTTCAAGCTTGCACTGGGCCAAATCAATTCTGCAAGGACCCTTATTGGAAAGATTTCTAAAGACTACGTGAAATTGTTGAAGTATGGTAATTCACTTTACCGATGCAAATGTCTCAAGGTTGCTGCTCTTGGCCGCATGTGCACGGTGATAAAGAGGATCGGTCCTAGTTTAGCTTATCTAGAACAAATTAGGCAACACATGGCAAGGCTACCTTCAATTGACCCTAATACCAGGACAGTATTGATTTGTGGCTATCCGAATGTTGGAAAGAGTTCATTCATTAACAAGATTACTAGGGCTGATGTGGATGTCCAGCCCTATGCTTTCACCACCAAATCCCTCTTTGTGGGACATACAGATTATAAATACTTGAGGTACCAGGTAATTGATACGCCGGGGATTTTGGACCGACCTTTTGAAGACCGTAATATAATTGAGATGTGCAGCATCACAGCTCTGGCCCACTTGAGAGCTGCGGTGTTGTTCTTCTTGGACATCTCGGGGTCTTGTGGGTACAACATTGCCCAACAGGCATCTCTTTTTCACAGCATTAAGTCTCTATTTATGAACAAACCACTGATTATAGTCTGCAACAAGACTGACTTGCAGCCACTGGAGGGCATATCCGAGGAAGACAAGAAGTTGGTCGCAGAGATGAAAAATGAAGCAATGAAGACAGTGATTGGTCAAGGGGGTGAGGCTACAAACGATGAGGGGGTACTCTTGACCATGAGCACTTTGACCGAGGAAGGGGTGATTTCTGTAAAGAACGCAGCTTGTGAGAGGTTGTTGAATCAGAGAGTAGAATTGAAGATGAAATCGAAAAAAATAAATGAATGCTTAAATCGTTTTCATGTTGCATTGCCAAAGCCGCGGGACAGCAAGGAAAGGCCCCTGTGTATACCTCAGGCAGTTTTAGAGGCTAAGTCTAAGCAAGCAGCGGAGAAGGAAAAGAGGAGTACAGAAAGGGATTTGGAGAATGAGAATGGTGGTGCTGGTGTGTACTCTTCCAGTTTGAAGAAGCACTATATCTTAGCTAATGACGAATGGAAAGAGGATGTCATGCCAGAAATTCTTGATGGGTACAATGTATGTGACTTTGTTGATCCTGATATATTTCACAGGCTTAAGGAGTTGGAACGAGAAGAAGGACTCCGACACGAAGAGCAGGGTGATGATGATTTTGAGATGGATGCATTGAAACTGACTCCAGAAGAGCAAGGGATGTTGTCGGAGATAAGGAAAAAGAGAAGCAAGTTCATTCAACAGCATAGAATCAAGAAAAGTACCGCAGAGAGTCGACCAATTGTACCAAGGAAATTCGACAAGGACAGGGAGTTCACAACAAAGAGAATGGGGAGGCAGCTTACAAAGTTGGGGATCGATCCTACTATGGCAATTAATCGAGCCCGAAGCAGATCTGTCTCCAGGGGTCGGAAGAGGGAGCGATCAGTTGATGGGGGTGATACTGATGGTGGCGATGCTATGGACATGGATGTTGATGCACCCAACAAGAAGCAGCGCATGTTATCTAGATCCCACTCCCGCTCTAGATCAAGGCCTCCAATTGAAGTTGTCCCTGGAGAGGGCTTCAAGGACTCTTCCCAAAAGGCCAAGGCAATAAAGAAGGCCCGGAAATCTAATATGATGCGAAACAAGAACGCTCGTCGTGGAGAGGCTGATAGGGTCATTCCCACTTTAAAACCAAAGCACTTGTTTTCTGGAAAACGATCGATTGGAAAAACTCAAAGGCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
MMR_HSR1 NOG1 NOGCT

Protein Analysis

782

Amino Acids

89.48

Weight (kDa)

9.58

Isoelectric Point (pI)

42.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NOG1_N PF17835 111 - 270 2.2e-60 NOG1 N-terminal helical domain
FeoB_N PF02421 275 - 424 5.6e-10 Ferrous iron transport protein B
MMR_HSR1 PF01926 276 - 395 3.4e-18 50S ribosome-binding GTPase
NOG1 PF06858 341 - 397 6.4e-25 Nucleolar GTP-binding protein 1 (NOG1)
NOGCT PF08155 515 - 568 4.5e-26 NOGCT (NUC087) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 951
AasI GACNNNNNNGTC 1 cut(s) 284
Acc16I TGCGCA 1 cut(s) 461
Acc36I ACCTGC 1 cut(s) 312
Acc65I GGTACC 1 cut(s) 963
AccB1I GGYRCC 1 cut(s) 963
AccBSI CCGCTC 1 cut(s) 2136
AccI GTMKAC 3 cut(s) 101, 1489, 1888
AccII CGCG 1 cut(s) 1462
AclWI GGATC 7 cut(s) 168, 591, 752, 1688, 1967, 1976, 2118
AcoI YGGCCR 1 cut(s) 718
AcsI RAATTY 5 cut(s) 217, 484, 518, 1659, 1907
AcvI CACGTG 1 cut(s) 284
AfaI GTAC 9 cut(s) 351, 965, 1103, 1308, 1549, 1592, 1673, 1876, 1899
AfiI CCNNNNNNNGG 9 cut(s) 311, 551, 851, 934, 1205, 1338, 2022, 2173, 2174
AflII CTTAAG 1 cut(s) 1715
AflIII ACRYGT 1 cut(s) 283
AjnI CCWGG 4 cut(s) 818, 966, 2015, 2167
AjuI GAANNNNNNNTTGG 2 cut(s) 471, 503
AloI GAACNNNNNNTCC 2 cut(s) 1910, 1942
AluBI AGCT 9 cut(s) 232, 499, 595, 761, 1043, 1061, 1364, 1625, 1954
AluI AGCT 9 cut(s) 232, 499, 595, 761, 1043, 1061, 1364, 1625, 1954
Alw21I GWGCWC 2 cut(s) 731, 1325
Alw26I GTCTC 3 cut(s) 704, 1149, 2017
Alw44I GTGCAC 1 cut(s) 727
AlwI GGATC 7 cut(s) 168, 591, 752, 1688, 1967, 1976, 2118
AlwNI CAGNNNCTG 1 cut(s) 1201
Ama87I CYCGRG 1 cut(s) 1087
AoxI GGCC 7 cut(s) 604, 718, 1047, 1478, 2147, 2199, 2217
ApaLI GTGCAC 1 cut(s) 727
ApoI RAATTY 5 cut(s) 217, 484, 518, 1659, 1907
ArsI GACNNNNNNTTYG 2 cut(s) 986, 1018
AseI ATTAAT 1 cut(s) 1989
Asp700I GAANNNNTTC 3 cut(s) 365, 640, 859
Asp718I GGTACC 1 cut(s) 963
AspA2I CCTAGG 1 cut(s) 524
AspLEI GCGC 4 cut(s) 7, 462, 2112, 2343
AspS9I GGNCC 7 cut(s) 604, 624, 749, 994, 1048, 1479, 2218
AsuC2I CCSGG 2 cut(s) 984, 2221
AsuHPI GGTGA 7 cut(s) 478, 745, 907, 1295, 1354, 1772, 2063
AvaI CYCGRG 1 cut(s) 1087
AvaII GGWCC 3 cut(s) 624, 749, 994
AvrII CCTAGG 1 cut(s) 524
AxyI CCTNAGG 1 cut(s) 1494
BaeGI GKGCMC 1 cut(s) 731
BaeI ACNNNNGTAYC 2 cut(s) 333, 366
BanI GGYRCC 1 cut(s) 963
BanII GRGCYC 1 cut(s) 1999
BauI CACGAG 1 cut(s) 105
BbrPI CACGTG 1 cut(s) 284
BbsI GAAGAC 3 cut(s) 1014, 1227, 1268
Bbv12I GWGCWC 2 cut(s) 731, 1325
BccI CCATC 4 cut(s) 1661, 1771, 2039, 2054
BciT130I CCWGG 4 cut(s) 820, 968, 2017, 2169
BcnI CCSGG 2 cut(s) 984, 2221
BcoDI GTCTC 3 cut(s) 704, 1149, 2017
BfaI CTAG 6 cut(s) 525, 753, 767, 882, 2121, 2139
BfmI CTRYAG 1 cut(s) 411
BfoI RGCGCY 1 cut(s) 2344
BfrI CTTAAG 1 cut(s) 1715
BfuAI ACCTGC 1 cut(s) 312
BglI GCCNNNNNGGC 1 cut(s) 1118
BglII AGATCT 1 cut(s) 2006
BlnI CCTAGG 1 cut(s) 524
Bme1390I CCNGG 6 cut(s) 820, 968, 984, 2017, 2169, 2221
Bme18I GGWCC 3 cut(s) 624, 749, 994
BmeT110I CYCGRG 1 cut(s) 1087
BmgT120I GGNCC 7 cut(s) 604, 624, 749, 994, 1048, 1479, 2218
BmiI GGNNCC 3 cut(s) 626, 965, 1481
BmrFI CCNGG 6 cut(s) 820, 968, 984, 2017, 2169, 2221
BmrI ACTGGG 1 cut(s) 611
BmsI GCATC 7 cut(s) 680, 1044, 1130, 1771, 2059, 2080, 2226
BmuI ACTGGG 1 cut(s) 611
BpiI GAAGAC 3 cut(s) 1014, 1227, 1268
BplI GAGNNNNNCTC 2 cut(s) 485, 517
BpmI CTGGAG 4 cut(s) 1223, 1782, 1999, 2190
BpuEI CTTGAG 3 cut(s) 686, 979, 1075
BpuMI CCSGG 2 cut(s) 984, 2221
Bsa29I ATCGAT 2 cut(s) 1971, 2321
BsaAI YACGTR 2 cut(s) 284, 655
BsaJI CCNNGG 9 cut(s) 524, 983, 1215, 1332, 1460, 1901, 2016, 2167, 2202
Bsc4I CCNNNNNNNGG 9 cut(s) 311, 551, 851, 934, 1205, 1338, 2022, 2173, 2174
Bse1I ACTGG 3 cut(s) 606, 1206, 1599
Bse21I CCTNAGG 1 cut(s) 1494
Bse3DI GCAATG 3 cut(s) 1107, 1263, 1448
BseBI CCWGG 4 cut(s) 820, 968, 2017, 2169
BseCI ATCGAT 2 cut(s) 1971, 2321
BseDI CCNNGG 9 cut(s) 524, 983, 1215, 1332, 1460, 1901, 2016, 2167, 2202
BseGI GGATG 5 cut(s) 901, 1651, 1786, 1818, 2089
BseLI CCNNNNNNNGG 9 cut(s) 311, 551, 851, 934, 1205, 1338, 2022, 2173, 2174
BseMI GCAATG 3 cut(s) 1107, 1263, 1448
BseMII CTCAG 1 cut(s) 1508
BseNI ACTGG 3 cut(s) 606, 1206, 1599
BseRI GAGGAG 1 cut(s) 1558
BseSI GKGCMC 1 cut(s) 731
BseYI CCCAGC 1 cut(s) 393
BsgI GTGCAG 1 cut(s) 1051
Bsh1236I CGCG 1 cut(s) 1462
Bsh1285I CGRYCG 1 cut(s) 2321
BshFI GGCC 7 cut(s) 606, 720, 1049, 1480, 2149, 2201, 2219
BshNI GGYRCC 1 cut(s) 963
BshVI ATCGAT 2 cut(s) 1971, 2321
BsiEI CGRYCG 1 cut(s) 2321
BsiHKAI GWGCWC 2 cut(s) 731, 1325
BsiHKCI CYCGRG 1 cut(s) 1087
BsiSI CCGG 2 cut(s) 983, 2221
BslFI GGGAC 3 cut(s) 951, 1478, 2150
BslI CCNNNNNNNGG 9 cut(s) 311, 551, 851, 934, 1205, 1338, 2022, 2173, 2174
BsmAI GTCTC 3 cut(s) 704, 1149, 2017
BsmFI GGGAC 3 cut(s) 951, 1478, 2150
BsmI GAATGC 1 cut(s) 1430
BsnI GGCC 7 cut(s) 606, 720, 1049, 1480, 2149, 2201, 2219
BsoBI CYCGRG 1 cut(s) 1087
Bsp1286I GDGCHC 3 cut(s) 731, 1325, 1999
BspANI GGCC 7 cut(s) 606, 720, 1049, 1480, 2149, 2201, 2219
BspCNI CTCAG 1 cut(s) 1507
BspDI ATCGAT 2 cut(s) 1971, 2321
BspFNI CGCG 1 cut(s) 1462
BspHI TCATGA 1 cut(s) 490
BspLI GGNNCC 3 cut(s) 626, 965, 1481
BspMI ACCTGC 1 cut(s) 312
BspPI GGATC 7 cut(s) 168, 591, 752, 1688, 1967, 1976, 2118
BspQI GCTCTTC 3 cut(s) 219, 1746, 1797
BspT107I GGYRCC 1 cut(s) 963
BspTI CTTAAG 1 cut(s) 1715
BsrBI CCGCTC 1 cut(s) 2136
BsrDI GCAATG 3 cut(s) 1107, 1263, 1448
BsrI ACTGG 3 cut(s) 606, 1206, 1599
BssECI CCNNGG 9 cut(s) 524, 983, 1215, 1332, 1460, 1901, 2016, 2167, 2202
BssNAI GTATAC 1 cut(s) 1490
BssSI CACGAG 1 cut(s) 105
BssT1I CCWWGG 3 cut(s) 524, 1901, 2202
Bst1107I GTATAC 1 cut(s) 1490
Bst2BI CACGAG 1 cut(s) 105
Bst2UI CCWGG 4 cut(s) 820, 968, 2017, 2169
Bst4CI ACNGT 7 cut(s) 210, 346, 412, 733, 826, 1013, 1267
Bst6I CTCTTC 6 cut(s) 219, 1600, 1746, 1797, 2021, 2194
BstAFI CTTAAG 1 cut(s) 1715
BstBAI YACGTR 2 cut(s) 284, 655
BstC8I GCNNGC 3 cut(s) 234, 597, 1524
BstDEI CTNAG 4 cut(s) 1494, 1512, 1518, 1621
BstDSI CCRYGG 1 cut(s) 1460
BstF5I GGATG 5 cut(s) 901, 1651, 1786, 1818, 2089
BstFNI CGCG 1 cut(s) 1462
BstH2I RGCGCY 1 cut(s) 2344
BstHHI GCGC 4 cut(s) 7, 462, 2112, 2343
BstMAI GTCTC 3 cut(s) 704, 1149, 2017
BstMCI CGRYCG 1 cut(s) 2321
BstMWI GCNNNNNNNGC 3 cut(s) 726, 1118, 1459
BstNI CCWGG 4 cut(s) 820, 968, 2017, 2169
BstNSI RCATGY 3 cut(s) 152, 727, 2116
BstSCI CCNGG 6 cut(s) 818, 966, 982, 2015, 2167, 2219
BstSFI CTRYAG 1 cut(s) 411
BstSLI GKGCMC 1 cut(s) 731
BstUI CGCG 1 cut(s) 1462
BstV2I GAAGAC 3 cut(s) 1014, 1227, 1268
BstX2I RGATCY 2 cut(s) 2006, 2123
BstYI RGATCY 2 cut(s) 2006, 2123
BstZ17I GTATAC 1 cut(s) 1490
Bsu15I ATCGAT 2 cut(s) 1971, 2321
Bsu36I CCTNAGG 1 cut(s) 1494
BsuRI GGCC 7 cut(s) 606, 720, 1049, 1480, 2149, 2201, 2219
BsuTUI ATCGAT 2 cut(s) 1971, 2321
BtgI CCRYGG 1 cut(s) 1460
BtgZI GCGATG 1 cut(s) 2082
BtsCI GGATG 5 cut(s) 901, 1651, 1786, 1818, 2089
BtsIMutI CAGTG 4 cut(s) 599, 1163, 1199, 1272
BveI ACCTGC 1 cut(s) 312
Cac8I GCNNGC 3 cut(s) 234, 597, 1524
CaiI CAGNNNCTG 1 cut(s) 1201
CciI TCATGA 1 cut(s) 490
CfoI GCGC 4 cut(s) 7, 462, 2112, 2343
Cfr13I GGNCC 7 cut(s) 604, 624, 749, 994, 1048, 1479, 2218
Cfr42I CCGCGG 1 cut(s) 1463
ClaI ATCGAT 2 cut(s) 1971, 2321
CsiI ACCWGGT 1 cut(s) 966
Csp6I GTAC 9 cut(s) 350, 964, 1102, 1307, 1548, 1591, 1672, 1875, 1898
CspCI CAANNNNNGTGG 2 cut(s) 493, 528
CviQI GTAC 9 cut(s) 350, 964, 1102, 1307, 1548, 1591, 1672, 1875, 1898
DdeI CTNAG 4 cut(s) 1494, 1512, 1518, 1621
DraI TTTAAA 1 cut(s) 2289
DrdI GACNNNNNNGTC 1 cut(s) 284
DseDI GACNNNNNNGTC 1 cut(s) 284
EaeI YGGCCR 1 cut(s) 718
Eam1104I CTCTTC 6 cut(s) 219, 1600, 1746, 1797, 2021, 2194
EarI CTCTTC 6 cut(s) 219, 1600, 1746, 1797, 2021, 2194
Eco130I CCWWGG 3 cut(s) 524, 1901, 2202
Eco147I AGGCCT 1 cut(s) 2149
Eco24I GRGCYC 1 cut(s) 1999
Eco32I GATATC 1 cut(s) 538
Eco47I GGWCC 3 cut(s) 624, 749, 994
Eco72I CACGTG 1 cut(s) 284
Eco81I CCTNAGG 1 cut(s) 1494
Eco88I CYCGRG 1 cut(s) 1087
EcoO109I RGGNCCY 2 cut(s) 624, 1479
EcoRI GAATTC 1 cut(s) 217
EcoRII CCWGG 4 cut(s) 818, 966, 2015, 2167
EcoRV GATATC 1 cut(s) 538
EcoT14I CCWWGG 3 cut(s) 524, 1901, 2202
EcoT22I ATGCAT 1 cut(s) 1786
EcoT38I GRGCYC 1 cut(s) 1999
ErhI CCWWGG 3 cut(s) 524, 1901, 2202
FalI AAGNNNNNCTT 8 cut(s) 216, 248, 572, 604, 784, 816, 1175, 1207
FaqI GGGAC 3 cut(s) 951, 1478, 2150
FauI CCCGC 3 cut(s) 446, 1455, 2141
FblI GTMKAC 3 cut(s) 101, 1489, 1888
FokI GGATG 5 cut(s) 908, 1658, 1793, 1825, 2096
FriOI GRGCYC 1 cut(s) 1999
FspBI CTAG 6 cut(s) 525, 753, 767, 882, 2121, 2139
FspI TGCGCA 1 cut(s) 461
GlaI GCGC 4 cut(s) 6, 461, 2111, 2342
GsaI CCCAGC 1 cut(s) 397
GsuI CTGGAG 4 cut(s) 1223, 1782, 1999, 2190
HaeII RGCGCY 1 cut(s) 2344
HaeIII GGCC 7 cut(s) 606, 720, 1049, 1480, 2149, 2201, 2219
HapII CCGG 2 cut(s) 983, 2221
HhaI GCGC 4 cut(s) 7, 462, 2112, 2343
Hin6I GCGC 4 cut(s) 5, 460, 2110, 2341
HinP1I GCGC 4 cut(s) 5, 460, 2110, 2341
HincII GTYRAC 2 cut(s) 102, 1889
HindII GTYRAC 2 cut(s) 102, 1889
HindIII AAGCTT 1 cut(s) 593
HinfI GANTC 8 cut(s) 121, 278, 1381, 1740, 1795, 1863, 1885, 2186
HpaII CCGG 2 cut(s) 983, 2221
HphI GGTGA 7 cut(s) 478, 745, 907, 1295, 1354, 1772, 2063
Hpy166II GTNNAC 7 cut(s) 102, 418, 729, 1490, 1591, 1889, 1929
Hpy188I TCNGA 7 cut(s) 223, 846, 1216, 1386, 1745, 1822, 2025
Hpy8I GTNNAC 7 cut(s) 102, 418, 729, 1490, 1591, 1889, 1929
Hpy99I CGWCG 1 cut(s) 2259
HpyAV CCTTC 8 cut(s) 355, 452, 569, 810, 1331, 1528, 1730, 2209
HpyCH4III ACNGT 7 cut(s) 210, 346, 412, 733, 826, 1013, 1267
HpyCH4IV ACGT 2 cut(s) 283, 654
HpyF10VI GCNNNNNNNGC 3 cut(s) 726, 1118, 1459
HpyF3I CTNAG 4 cut(s) 1494, 1512, 1518, 1621
HpySE526I ACGT 2 cut(s) 283, 654
HspAI GCGC 4 cut(s) 5, 460, 2110, 2341
KpnI GGTACC 1 cut(s) 967
KspI CCGCGG 1 cut(s) 1463
LguI GCTCTTC 3 cut(s) 219, 1746, 1797
LmnI GCTCC 1 cut(s) 2032
LweI GCATC 7 cut(s) 680, 1044, 1130, 1771, 2059, 2080, 2226
MabI ACCWGGT 1 cut(s) 966
MaeI CTAG 6 cut(s) 525, 753, 767, 882, 2121, 2139
MaeII ACGT 2 cut(s) 283, 654
MaeIII GTNAC 1 cut(s) 1682
MbiI CCGCTC 1 cut(s) 2136
MfeI CAATTG 3 cut(s) 804, 1893, 2154
MflI RGATCY 2 cut(s) 2006, 2123
MhlI GDGCHC 3 cut(s) 731, 1325, 1999
MlyI GAGTC 5 cut(s) 272, 1734, 1789, 1894, 2180
MmeI TCCRAC 5 cut(s) 832, 1704, 1768, 1800, 2003
Mph1103I ATGCAT 1 cut(s) 1786
MroXI GAANNNNTTC 3 cut(s) 365, 640, 859
MseI TTAA 8 cut(s) 174, 333, 870, 1140, 1430, 1716, 1989, 2288
MspA1I CMGCKG 4 cut(s) 127, 397, 1462, 1529
MspCI CTTAAG 1 cut(s) 1715
MspI CCGG 2 cut(s) 983, 2221
MspR9I CCNGG 6 cut(s) 820, 968, 984, 2017, 2169, 2221
MunI CAATTG 3 cut(s) 804, 1893, 2154
Mva1269I GAATGC 1 cut(s) 1430
MvaI CCWGG 4 cut(s) 820, 968, 2017, 2169
MvnI CGCG 1 cut(s) 1462
MwoI GCNNNNNNNGC 3 cut(s) 726, 1118, 1459
NciI CCSGG 2 cut(s) 984, 2221
NlaIV GGNNCC 3 cut(s) 626, 965, 1481
NmuCI GTSAC 1 cut(s) 1682
NsbI TGCGCA 1 cut(s) 461
NsiI ATGCAT 1 cut(s) 1786
NspI RCATGY 3 cut(s) 152, 727, 2116
PagI TCATGA 1 cut(s) 490
PceI AGGCCT 1 cut(s) 2149
PciSI GCTCTTC 3 cut(s) 219, 1746, 1797
PctI GAATGC 1 cut(s) 1430
PdmI GAANNNNTTC 3 cut(s) 365, 640, 859
PfeI GAWTC 3 cut(s) 121, 1381, 1863
Ple19I CGATCG 1 cut(s) 2321
PleI GAGTC 5 cut(s) 272, 1734, 1789, 1893, 2180
PmaCI CACGTG 1 cut(s) 284
PmlI CACGTG 1 cut(s) 284
PpsI GAGTC 5 cut(s) 272, 1734, 1789, 1893, 2180
Ppu21I YACGTR 2 cut(s) 284, 655
PpuMI RGGWCCY 1 cut(s) 624
PshBI ATTAAT 1 cut(s) 1989
PsiI TTATAA 1 cut(s) 951
Psp5II RGGWCCY 1 cut(s) 624
Psp6I CCWGG 4 cut(s) 818, 966, 2015, 2167
PspCI CACGTG 1 cut(s) 284
PspFI CCCAGC 1 cut(s) 393
PspGI CCWGG 4 cut(s) 818, 966, 2015, 2167
PspN4I GGNNCC 3 cut(s) 626, 965, 1481
PspPI GGNCC 7 cut(s) 604, 624, 749, 994, 1048, 1479, 2218
PspPPI RGGWCCY 1 cut(s) 624
PstNI CAGNNNCTG 1 cut(s) 1201
PsuI RGATCY 2 cut(s) 2006, 2123
PvuI CGATCG 1 cut(s) 2321
RsaI GTAC 9 cut(s) 351, 965, 1103, 1308, 1549, 1592, 1673, 1876, 1899
RsaNI GTAC 9 cut(s) 350, 964, 1102, 1307, 1548, 1591, 1672, 1875, 1898
SacII CCGCGG 1 cut(s) 1463
SalI GTCGAC 2 cut(s) 100, 1887
SapI GCTCTTC 3 cut(s) 219, 1746, 1797
SaqAI TTAA 8 cut(s) 174, 333, 870, 1140, 1430, 1716, 1989, 2288
Sau96I GGNCC 7 cut(s) 604, 624, 749, 994, 1048, 1479, 2218
SchI GAGTC 5 cut(s) 272, 1734, 1789, 1894, 2180
ScrFI CCNGG 6 cut(s) 820, 968, 984, 2017, 2169, 2221
SduI GDGCHC 3 cut(s) 731, 1325, 1999
SexAI ACCWGGT 1 cut(s) 966
SfaNI GCATC 7 cut(s) 680, 1044, 1130, 1771, 2059, 2080, 2226
SfcI CTRYAG 1 cut(s) 411
Sfr303I CCGCGG 1 cut(s) 1463
SgrBI CCGCGG 1 cut(s) 1463
SinI GGWCC 3 cut(s) 624, 749, 994
SmlI CTYRAG 4 cut(s) 701, 958, 1054, 1715
SmoI CTYRAG 4 cut(s) 701, 958, 1054, 1715
SseBI AGGCCT 1 cut(s) 2149
SspMI CTAG 6 cut(s) 525, 753, 767, 882, 2121, 2139
StuI AGGCCT 1 cut(s) 2149
StyD4I CCNGG 6 cut(s) 818, 966, 982, 2015, 2167, 2219
StyI CCWWGG 3 cut(s) 524, 1901, 2202
TaaI ACNGT 7 cut(s) 210, 346, 412, 733, 826, 1013, 1267
TaiI ACGT 2 cut(s) 286, 657
TaqI TCGA 8 cut(s) 101, 186, 1409, 1888, 1911, 1971, 1993, 2321
TaqII GACCGA 3 cut(s) 737, 1011, 1346
TatI WGTACW 2 cut(s) 1547, 1590
TauI GCSGC 3 cut(s) 400, 723, 1462
TfiI GAWTC 3 cut(s) 121, 1381, 1863
Tru1I TTAA 8 cut(s) 174, 333, 870, 1140, 1430, 1716, 1989, 2288
Tru9I TTAA 8 cut(s) 174, 333, 870, 1140, 1430, 1716, 1989, 2288
TscAI CASTG 4 cut(s) 606, 1170, 1206, 1272
TseFI GTSAC 1 cut(s) 1682
Tsp45I GTSAC 1 cut(s) 1682
TspRI CASTG 4 cut(s) 606, 1170, 1206, 1272
Vha464I CTTAAG 1 cut(s) 1715
VneI GTGCAC 1 cut(s) 727
VpaK11BI GGWCC 3 cut(s) 624, 749, 994
VspI ATTAAT 1 cut(s) 1989
XapI RAATTY 5 cut(s) 217, 484, 518, 1659, 1907
XbaI TCTAGA 3 cut(s) 766, 2120, 2138
XceI RCATGY 3 cut(s) 152, 727, 2116
XcmI CCANNNNNNNNNTGG 1 cut(s) 548
XmaJI CCTAGG 1 cut(s) 524
XmiI GTMKAC 3 cut(s) 101, 1489, 1888
XmnI GAANNNNTTC 3 cut(s) 365, 640, 859
XspI CTAG 6 cut(s) 525, 753, 767, 882, 2121, 2139
Zsp2I ATGCAT 1 cut(s) 1786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.