Rw5G032900

Involved in the biogenesis of the 60S ribosomal subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0001573
Physical Location & Seq
Reverse (-)
55848702 .. 55852223
3522 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G032900.1

Sequence Viewer

Length: 2031 bp
ATGGTGCAATATAATTTCAAGAGGATGACTGTTGTTCCCAGCGGGAAGGACTTCATCGATATTATCCTTTCTCGCACCCAGCGGCAGACCCCAACTGTGGTCCACAAGGGTTATGCAATTAACCGCCTGCGTCAGTTCTATATGCGCAAAGTGAAATACACCCAGACAAATTTTCATGAGAAGCTCTCTACTATCATTGATGAATTTCCTAGGCTGGACGACATCCACCCTTTCTATGGTGATCTTCTGCATGTTCTCTACAACAAGGACCATTATAAGCTCGCACTGGGTCAAATCAATACTGCAAGGAACCTTATCTCCAAGATTGCTAAGGATTATGTCAAGTTATTGAAGTATGGTGATTCACTTTACCGATGCAAGAGTCTCAAGGTTGCTGCTCTTGGCCGTATGTGCACGGTCATAAAGAGGATTGGCCCTAGTTTAGCTTATCTAGAACAAATTAGGCAACACATGGCAAGGCTGCCTTCAATTGATCCAAACACCCGGACAATATTGATTTGCGGCTATCCCAATGTCGGAAAGAGTTCATTCATCAACAAGATCACCAGAGCAGATGTTGATGTCCAGCCCTATGCTTTTACTACCAAGTCACTCTTTGTGGGGCATACTGATTATAAGTACTTGAGGTACCAGGTTATTGATACACCTGGGATTTTGGACCGACCATTTGAAGACCGTAACATTATTGAGATGTGCAGCATCACTGCATTGGCACATTTGAGAGCTGCTGTTTTGTTCTTCTTAGACATCTCAGGGTCTTGTGGTTATACCATTGCCCAACAAGCTGCTCTTTTTCACAGCATTAAGTCTCTGTTCATGAACAAACCATTGATTATAGTCTGCAACAAGACTGATTTGCAGCCATTGGAGGGCATATCTGAGGAAGACATGAAGTTGGTCACAGAGATGAAAGCTGAAGCTATGAAGACTGTGATTGGTCAGGGAGGCGAGGCTACTAATGATGAGGGGGTACTCTTGACCATGAGCACTTTGACCGAGGAGGGGGTTATCTCTGTAAAGAATGCAGCTTGTGAGAGGTTATTGAATCAGAGAGTTGAGTTGAAGATGAAATCTAAAAAGATAAATGATTGTTTAAATCGTTTTCATGTTGCGATGCCAAAGCCACGTGACCAAAAGGAAAGGCCTCCATGTATACCTCAGGCTGTTTTAGAAGCCAAGGCTAAGCAAGCAGCAGAGAAGGAAAAGAGAACTACTGAAAAGGATTTGGAGAATGAAAATGGTGGTGCTGGTGTATACTCTGCCAGTTTGAAGAAGAATTATATCCTTGCTCATGATGAGTGGAAAGAGGATATTATGCCTGAAATTCTTGATGGGCACAATGTATTTGACTTTGTTGATCCTGATATTTTGAATAGGCTTGAGGAGTTGGAACGAGAAGAAGGAATCAGGCAGGCAGAGGAGGATGATGATGTGGAGATGGGTGAAATGGAGTTGACTCCAGAAGAGCAGAAGACATTGGCTCAGATAAGGAAAAAGAAAAGCTTGCTGATTCAACAACATAGAATCAAGAAAAGTACCGCGGAGAGTAGGCCTACAGTACCTAGGAAATTTGACAAGGACAGGCAGTTCACAACAAAGAGAATGGGGAGGCAGCTGTCAGAGTTGGGAATTGATCCTAGTAAGGCAATTGACCGAGCCCGCAGCAGATCTGTTTCTGCAAGGGGCCGAAAGAGAGAGAGATCAGTTGACAAGGGTGATACTGAAGGTGGTGGTGTCATGGATATGGATGTGGATACACCCAACAAGAAGCTGCGCTCAATGTCCAGACCCCGTTCAAGGTCAAGATCAAGGCCGCCTACTGATGTTGTCCCTGGTGATGGCTTTAAGGACTCTGATCAAAAGTCTAAAGCACTAGACAAGGCCCGGAAATCTGTGAAGAACAGAAACAAGAATGCTAGACGTGGGGAGGCAGATAGAGTTATTCCCAATTTGAAACCAAAGCATTTGTTCTCTGGAAAACGCTCCAATGGAAAGACCCAAAGGCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
MMR_HSR1 NOG1 NOGCT

Protein Analysis

676

Amino Acids

77.1

Weight (kDa)

9.57

Isoelectric Point (pI)

42.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NOG1_N PF17835 6 - 165 7e-61 NOG1 N-terminal helical domain
FeoB_N PF02421 170 - 319 1.5e-09 Ferrous iron transport protein B
MMR_HSR1 PF01926 171 - 290 3.1e-18 50S ribosome-binding GTPase
NOG1 PF06858 236 - 292 6.7e-25 Nucleolar GTP-binding protein 1 (NOG1)
NOGCT PF08155 410 - 463 1.6e-26 NOGCT (NUC087) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 276, 636
Acc16I TGCGCA 1 cut(s) 146
Acc65I GGTACC 1 cut(s) 648
AccB1I GGYRCC 1 cut(s) 648
AccI GTMKAC 2 cut(s) 1174, 1275
AccII CGCG 1 cut(s) 1562
AciI CCGC 8 cut(s) 42, 82, 124, 522, 1560, 1562, 1681, 1835
AclWI GGATC 3 cut(s) 488, 1373, 1649
AcoI YGGCCR 1 cut(s) 403
AcsI RAATTY 4 cut(s) 169, 203, 1344, 1589
AcuI CTGAAG 2 cut(s) 957, 1764
AcvI CACGTG 1 cut(s) 1148
AfaI GTAC 5 cut(s) 641, 650, 993, 1558, 1581
AfiI CCNNNNNNNGG 7 cut(s) 97, 236, 536, 890, 1023, 1818, 1859
AjiI CACGTC 1 cut(s) 1943
AjnI CCWGG 3 cut(s) 651, 667, 1852
AloI GAACNNNNNNTCC 4 cut(s) 302, 334, 1592, 1624
Alw21I GWGCWC 2 cut(s) 416, 1010
Alw26I GTCTC 2 cut(s) 389, 834
Alw44I GTGCAC 1 cut(s) 412
AlwI GGATC 3 cut(s) 488, 1373, 1649
AoxI GGCC 7 cut(s) 403, 433, 1163, 1571, 1705, 1832, 1902
ApaLI GTGCAC 1 cut(s) 412
ApoI RAATTY 4 cut(s) 169, 203, 1344, 1589
ArsI GACNNNNNNTTYG 2 cut(s) 671, 703
Asp700I GAANNNNTTC 2 cut(s) 50, 544
Asp718I GGTACC 1 cut(s) 648
AspA2I CCTAGG 2 cut(s) 209, 1583
AspLEI GCGC 3 cut(s) 147, 1797, 2028
AspS9I GGNCC 6 cut(s) 100, 268, 434, 679, 1705, 1903
AsuC2I CCSGG 2 cut(s) 505, 1906
AsuHPI GGTGA 6 cut(s) 251, 371, 556, 1475, 1748, 1868
AvaII GGWCC 3 cut(s) 100, 268, 679
AvrII CCTAGG 2 cut(s) 209, 1583
AxyI CCTNAGG 1 cut(s) 1179
BaeGI GKGCMC 2 cut(s) 416, 1359
BanI GGYRCC 1 cut(s) 648
BanII GRGCYC 1 cut(s) 1681
BbrPI CACGTG 1 cut(s) 1148
BbsI GAAGAC 4 cut(s) 699, 912, 953, 1499
Bbv12I GWGCWC 2 cut(s) 416, 1010
BccI CCATC 3 cut(s) 1346, 1453, 1853
BceAI ACGGC 1 cut(s) 390
BciT130I CCWGG 3 cut(s) 653, 669, 1854
BciVI GTATCC 1 cut(s) 1768
BclI TGATCA 1 cut(s) 1876
BcnI CCSGG 2 cut(s) 505, 1906
BcoDI GTCTC 2 cut(s) 389, 834
BfaI CTAG 7 cut(s) 210, 438, 452, 1584, 1659, 1895, 1938
BfmI CTRYAG 1 cut(s) 1575
BfoI RGCGCY 1 cut(s) 2029
BfuI GTATCC 1 cut(s) 1768
BglII AGATCT 1 cut(s) 1688
BlnI CCTAGG 2 cut(s) 209, 1583
BlpI GCTNAGC 1 cut(s) 1203
BmcAI AGTACT 1 cut(s) 641
Bme1390I CCNGG 5 cut(s) 505, 653, 669, 1854, 1906
Bme18I GGWCC 3 cut(s) 100, 268, 679
BmgBI CACGTC 1 cut(s) 1943
BmgT120I GGNCC 6 cut(s) 100, 268, 434, 679, 1705, 1903
BmiI GGNNCC 3 cut(s) 311, 650, 1706
BmrFI CCNGG 5 cut(s) 505, 653, 669, 1854, 1906
BmrI ACTGGG 1 cut(s) 296
BmsI GCATC 3 cut(s) 365, 729, 1125
BmuI ACTGGG 1 cut(s) 296
BpiI GAAGAC 4 cut(s) 699, 912, 953, 1499
BplI GAGNNNNNCTC 2 cut(s) 170, 202
BpmI CTGGAG 1 cut(s) 1464
Bpu10I CCTNAGC 1 cut(s) 330
Bpu1102I GCTNAGC 1 cut(s) 1203
BpuEI CTTGAG 3 cut(s) 371, 664, 1421
BpuMI CCSGG 2 cut(s) 505, 1906
Bsa29I ATCGAT 1 cut(s) 57
BsaAI YACGTR 1 cut(s) 1148
BsaJI CCNNGG 7 cut(s) 209, 668, 1017, 1197, 1560, 1583, 1852
BsaXI ACNNNNNCTCC 2 cut(s) 302, 332
Bsc4I CCNNNNNNNGG 7 cut(s) 97, 236, 536, 890, 1023, 1818, 1859
Bse1I ACTGG 2 cut(s) 291, 1284
Bse21I CCTNAGG 1 cut(s) 1179
Bse3DI GCAATG 1 cut(s) 792
BseBI CCWGG 3 cut(s) 653, 669, 1854
BseCI ATCGAT 1 cut(s) 57
BseDI CCNNGG 7 cut(s) 209, 668, 1017, 1197, 1560, 1583, 1852
BseGI GGATG 4 cut(s) 30, 222, 1450, 1774
BseLI CCNNNNNNNGG 7 cut(s) 97, 236, 536, 890, 1023, 1818, 1859
BseMI GCAATG 1 cut(s) 792
BseMII CTCAG 4 cut(s) 786, 891, 1193, 1517
BseNI ACTGG 2 cut(s) 291, 1284
BseRI GAGGAG 3 cut(s) 1034, 1418, 1454
BseSI GKGCMC 2 cut(s) 416, 1359
BseYI CCCAGC 2 cut(s) 38, 78
BsgI GTGCAG 1 cut(s) 736
Bsh1236I CGCG 1 cut(s) 1562
BshFI GGCC 7 cut(s) 405, 435, 1165, 1573, 1707, 1834, 1904
BshNI GGYRCC 1 cut(s) 648
BshVI ATCGAT 1 cut(s) 57
BsiHKAI GWGCWC 2 cut(s) 416, 1010
BsiSI CCGG 2 cut(s) 505, 1906
BslFI GGGAC 1 cut(s) 1835
BslI CCNNNNNNNGG 7 cut(s) 97, 236, 536, 890, 1023, 1818, 1859
BsmAI GTCTC 2 cut(s) 389, 834
BsmFI GGGAC 1 cut(s) 1835
BsmI GAATGC 2 cut(s) 1048, 1939
BsnI GGCC 7 cut(s) 405, 435, 1165, 1573, 1707, 1834, 1904
Bsp1286I GDGCHC 4 cut(s) 416, 1010, 1359, 1681
Bsp143I GATC 9 cut(s) 241, 493, 561, 1378, 1654, 1688, 1721, 1826, 1876
Bsp1720I GCTNAGC 1 cut(s) 1203
BspACI CCGC 8 cut(s) 42, 82, 124, 522, 1560, 1562, 1681, 1835
BspANI GGCC 7 cut(s) 405, 435, 1165, 1573, 1707, 1834, 1904
BspCNI CTCAG 4 cut(s) 785, 892, 1192, 1516
BspDI ATCGAT 1 cut(s) 57
BspFNI CGCG 1 cut(s) 1562
BspHI TCATGA 3 cut(s) 175, 837, 1312
BspLI GGNNCC 3 cut(s) 311, 650, 1706
BspPI GGATC 3 cut(s) 488, 1373, 1649
BspQI GCTCTTC 1 cut(s) 1479
BspT107I GGYRCC 1 cut(s) 648
BsrDI GCAATG 1 cut(s) 792
BsrI ACTGG 2 cut(s) 291, 1284
BssECI CCNNGG 7 cut(s) 209, 668, 1017, 1197, 1560, 1583, 1852
BssMI GATC 9 cut(s) 241, 493, 561, 1378, 1654, 1688, 1721, 1826, 1876
BssNAI GTATAC 2 cut(s) 1175, 1276
BssT1I CCWWGG 3 cut(s) 209, 1197, 1583
Bst1107I GTATAC 2 cut(s) 1175, 1276
Bst2UI CCWGG 3 cut(s) 653, 669, 1854
Bst4CI ACNGT 6 cut(s) 31, 97, 418, 698, 952, 1579
Bst6I CTCTTC 1 cut(s) 1479
BstBAI YACGTR 1 cut(s) 1148
BstC8I GCNNGC 6 cut(s) 128, 282, 1209, 1434, 1526, 1681
BstDEI CTNAG 7 cut(s) 330, 763, 772, 900, 1179, 1203, 1503
BstDSI CCRYGG 1 cut(s) 1560
BstF5I GGATG 4 cut(s) 30, 222, 1450, 1774
BstFNI CGCG 1 cut(s) 1562
BstH2I RGCGCY 1 cut(s) 2029
BstHHI GCGC 3 cut(s) 147, 1797, 2028
BstKTI GATC 9 cut(s) 244, 496, 564, 1381, 1657, 1691, 1724, 1829, 1879
BstMAI GTCTC 2 cut(s) 389, 834
BstMBI GATC 9 cut(s) 241, 493, 561, 1378, 1654, 1688, 1721, 1826, 1876
BstMWI GCNNNNNNNGC 3 cut(s) 411, 803, 1208
BstNI CCWGG 3 cut(s) 653, 669, 1854
BstNSI RCATGY 1 cut(s) 254
BstSCI CCNGG 5 cut(s) 503, 651, 667, 1852, 1904
BstSFI CTRYAG 1 cut(s) 1575
BstSLI GKGCMC 2 cut(s) 416, 1359
BstUI CGCG 1 cut(s) 1562
BstV2I GAAGAC 4 cut(s) 699, 912, 953, 1499
BstX2I RGATCY 1 cut(s) 1688
BstYI RGATCY 1 cut(s) 1688
BstZ17I GTATAC 2 cut(s) 1175, 1276
Bsu15I ATCGAT 1 cut(s) 57
Bsu36I CCTNAGG 1 cut(s) 1179
BsuI GTATCC 1 cut(s) 1768
BsuRI GGCC 7 cut(s) 405, 435, 1165, 1573, 1707, 1834, 1904
BsuTUI ATCGAT 1 cut(s) 57
BtgI CCRYGG 1 cut(s) 1560
BtgZI GCGATG 1 cut(s) 1148
BtrI CACGTC 1 cut(s) 1943
BtsCI GGATG 4 cut(s) 30, 222, 1450, 1774
BtsI GCAGTG 1 cut(s) 723
BtsIMutI CAGTG 2 cut(s) 284, 723
Cac8I GCNNGC 6 cut(s) 128, 282, 1209, 1434, 1526, 1681
CciI TCATGA 3 cut(s) 175, 837, 1312
CfoI GCGC 3 cut(s) 147, 1797, 2028
Cfr13I GGNCC 6 cut(s) 100, 268, 434, 679, 1705, 1903
Cfr42I CCGCGG 1 cut(s) 1563
ClaI ATCGAT 1 cut(s) 57
CseI GACGC 1 cut(s) 119
CsiI ACCWGGT 1 cut(s) 651
Csp6I GTAC 5 cut(s) 640, 649, 992, 1557, 1580
CviQI GTAC 5 cut(s) 640, 649, 992, 1557, 1580
DdeI CTNAG 7 cut(s) 330, 763, 772, 900, 1179, 1203, 1503
DpnI GATC 9 cut(s) 243, 495, 563, 1380, 1656, 1690, 1723, 1828, 1878
DpnII GATC 9 cut(s) 241, 493, 561, 1378, 1654, 1688, 1721, 1826, 1876
DraI TTTAAA 1 cut(s) 1116
EaeI YGGCCR 1 cut(s) 403
Eam1104I CTCTTC 1 cut(s) 1479
EarI CTCTTC 1 cut(s) 1479
Eco130I CCWWGG 3 cut(s) 209, 1197, 1583
Eco147I AGGCCT 2 cut(s) 1165, 1573
Eco24I GRGCYC 1 cut(s) 1681
Eco47I GGWCC 3 cut(s) 100, 268, 679
Eco57I CTGAAG 2 cut(s) 957, 1764
Eco72I CACGTG 1 cut(s) 1148
Eco81I CCTNAGG 1 cut(s) 1179
EcoRII CCWGG 3 cut(s) 651, 667, 1852
EcoT14I CCWWGG 3 cut(s) 209, 1197, 1583
EcoT38I GRGCYC 1 cut(s) 1681
ErhI CCWWGG 3 cut(s) 209, 1197, 1583
FalI AAGNNNNNCTT 8 cut(s) 469, 501, 599, 631, 795, 827, 1508, 1540
FaqI GGGAC 1 cut(s) 1835
FauI CCCGC 2 cut(s) 35, 1688
FbaI TGATCA 1 cut(s) 1876
FblI GTMKAC 2 cut(s) 1174, 1275
FokI GGATG 4 cut(s) 37, 209, 1457, 1781
FriOI GRGCYC 1 cut(s) 1681
FspBI CTAG 7 cut(s) 210, 438, 452, 1584, 1659, 1895, 1938
FspI TGCGCA 1 cut(s) 146
GlaI GCGC 3 cut(s) 146, 1796, 2027
GsaI CCCAGC 2 cut(s) 42, 82
GsuI CTGGAG 1 cut(s) 1464
HaeII RGCGCY 1 cut(s) 2029
HaeIII GGCC 7 cut(s) 405, 435, 1165, 1573, 1707, 1834, 1904
HapII CCGG 2 cut(s) 505, 1906
HgaI GACGC 1 cut(s) 119
HhaI GCGC 3 cut(s) 147, 1797, 2028
Hin6I GCGC 3 cut(s) 145, 1795, 2026
HinP1I GCGC 3 cut(s) 145, 1795, 2026
HincII GTYRAC 2 cut(s) 1476, 1729
HindII GTYRAC 2 cut(s) 1476, 1729
HindIII AAGCTT 1 cut(s) 1522
HinfI GANTC 8 cut(s) 362, 382, 1066, 1425, 1477, 1531, 1545, 1871
HpaII CCGG 2 cut(s) 505, 1906
HphI GGTGA 6 cut(s) 251, 371, 556, 1475, 1748, 1868
Hpy166II GTNNAC 7 cut(s) 103, 414, 1175, 1276, 1476, 1611, 1729
Hpy188I TCNGA 6 cut(s) 539, 901, 1071, 1506, 1642, 1876
Hpy8I GTNNAC 7 cut(s) 103, 414, 1175, 1276, 1476, 1611, 1729
HpyAV CCTTC 5 cut(s) 40, 495, 1213, 1415, 1739
HpyCH4III ACNGT 6 cut(s) 31, 97, 418, 698, 952, 1579
HpyCH4IV ACGT 2 cut(s) 1147, 1942
HpyF10VI GCNNNNNNNGC 3 cut(s) 411, 803, 1208
HpyF3I CTNAG 7 cut(s) 330, 763, 772, 900, 1179, 1203, 1503
HpySE526I ACGT 2 cut(s) 1147, 1942
HspAI GCGC 3 cut(s) 145, 1795, 2026
KpnI GGTACC 1 cut(s) 652
Ksp22I TGATCA 1 cut(s) 1876
KspI CCGCGG 1 cut(s) 1563
Kzo9I GATC 9 cut(s) 241, 493, 561, 1378, 1654, 1688, 1721, 1826, 1876
LguI GCTCTTC 1 cut(s) 1479
LmnI GCTCC 1 cut(s) 2009
LweI GCATC 3 cut(s) 365, 729, 1125
MabI ACCWGGT 1 cut(s) 651
MaeI CTAG 7 cut(s) 210, 438, 452, 1584, 1659, 1895, 1938
MaeII ACGT 2 cut(s) 1147, 1942
MaeIII GTNAC 4 cut(s) 609, 698, 919, 1148
MalI GATC 9 cut(s) 243, 495, 563, 1380, 1656, 1690, 1723, 1828, 1878
MboI GATC 9 cut(s) 241, 493, 561, 1378, 1654, 1688, 1721, 1826, 1876
MfeI CAATTG 2 cut(s) 489, 1668
MflI RGATCY 1 cut(s) 1688
MhlI GDGCHC 4 cut(s) 416, 1010, 1359, 1681
MlyI GAGTC 3 cut(s) 391, 1471, 1865
MmeI TCCRAC 2 cut(s) 517, 1389
MroXI GAANNNNTTC 2 cut(s) 50, 544
MseI TTAA 4 cut(s) 120, 825, 1115, 1866
MslI CAYNNNNRTG 2 cut(s) 926, 1763
MspA1I CMGCKG 4 cut(s) 42, 82, 1562, 1636
MspI CCGG 2 cut(s) 505, 1906
MspR9I CCNGG 5 cut(s) 505, 653, 669, 1854, 1906
MunI CAATTG 2 cut(s) 489, 1668
Mva1269I GAATGC 2 cut(s) 1048, 1939
MvaI CCWGG 3 cut(s) 653, 669, 1854
MvnI CGCG 1 cut(s) 1562
MwoI GCNNNNNNNGC 3 cut(s) 411, 803, 1208
NciI CCSGG 2 cut(s) 505, 1906
NdeII GATC 9 cut(s) 241, 493, 561, 1378, 1654, 1688, 1721, 1826, 1876
NlaIV GGNNCC 3 cut(s) 311, 650, 1706
NmuCI GTSAC 3 cut(s) 609, 919, 1148
NsbI TGCGCA 1 cut(s) 146
NspI RCATGY 1 cut(s) 254
PagI TCATGA 3 cut(s) 175, 837, 1312
PceI AGGCCT 2 cut(s) 1165, 1573
PciSI GCTCTTC 1 cut(s) 1479
PctI GAATGC 2 cut(s) 1048, 1939
PdmI GAANNNNTTC 2 cut(s) 50, 544
PfeI GAWTC 5 cut(s) 362, 1066, 1425, 1531, 1545
PleI GAGTC 3 cut(s) 390, 1471, 1865
PmaCI CACGTG 1 cut(s) 1148
PmlI CACGTG 1 cut(s) 1148
PpsI GAGTC 3 cut(s) 390, 1471, 1865
Ppu21I YACGTR 1 cut(s) 1148
PsiI TTATAA 2 cut(s) 276, 636
Psp6I CCWGG 3 cut(s) 651, 667, 1852
PspCI CACGTG 1 cut(s) 1148
PspFI CCCAGC 2 cut(s) 38, 78
PspGI CCWGG 3 cut(s) 651, 667, 1852
PspN4I GGNNCC 3 cut(s) 311, 650, 1706
PspPI GGNCC 6 cut(s) 100, 268, 434, 679, 1705, 1903
PsuI RGATCY 1 cut(s) 1688
PvuII CAGCTG 1 cut(s) 1636
RsaI GTAC 5 cut(s) 641, 650, 993, 1558, 1581
RsaNI GTAC 5 cut(s) 640, 649, 992, 1557, 1580
RseI CAYNNNNRTG 2 cut(s) 926, 1763
SacII CCGCGG 1 cut(s) 1563
SapI GCTCTTC 1 cut(s) 1479
SaqAI TTAA 4 cut(s) 120, 825, 1115, 1866
Sau3AI GATC 9 cut(s) 241, 493, 561, 1378, 1654, 1688, 1721, 1826, 1876
Sau96I GGNCC 6 cut(s) 100, 268, 434, 679, 1705, 1903
ScaI AGTACT 1 cut(s) 641
SchI GAGTC 3 cut(s) 391, 1471, 1865
ScrFI CCNGG 5 cut(s) 505, 653, 669, 1854, 1906
SduI GDGCHC 4 cut(s) 416, 1010, 1359, 1681
SexAI ACCWGGT 1 cut(s) 651
SfaNI GCATC 3 cut(s) 365, 729, 1125
SfcI CTRYAG 1 cut(s) 1575
Sfr303I CCGCGG 1 cut(s) 1563
SgrBI CCGCGG 1 cut(s) 1563
SinI GGWCC 3 cut(s) 100, 268, 679
SmiMI CAYNNNNRTG 2 cut(s) 926, 1763
SmlI CTYRAG 3 cut(s) 386, 643, 1400
SmoI CTYRAG 3 cut(s) 386, 643, 1400
SseBI AGGCCT 2 cut(s) 1165, 1573
SsiI CCGC 8 cut(s) 42, 82, 124, 522, 1560, 1562, 1681, 1835
SspI AATATT 1 cut(s) 513
SspMI CTAG 7 cut(s) 210, 438, 452, 1584, 1659, 1895, 1938
StuI AGGCCT 2 cut(s) 1165, 1573
StyD4I CCNGG 5 cut(s) 503, 651, 667, 1852, 1904
StyI CCWWGG 3 cut(s) 209, 1197, 1583
TaaI ACNGT 6 cut(s) 31, 97, 418, 698, 952, 1579
TaiI ACGT 2 cut(s) 1150, 1945
TaqI TCGA 1 cut(s) 57
TaqII GACCGA 3 cut(s) 696, 1031, 1689
TatI WGTACW 1 cut(s) 639
TauI GCSGC 3 cut(s) 85, 525, 1837
TfiI GAWTC 5 cut(s) 362, 1066, 1425, 1531, 1545
Tru1I TTAA 4 cut(s) 120, 825, 1115, 1866
Tru9I TTAA 4 cut(s) 120, 825, 1115, 1866
TscAI CASTG 2 cut(s) 291, 730
TseFI GTSAC 3 cut(s) 609, 919, 1148
Tsp45I GTSAC 3 cut(s) 609, 919, 1148
TspRI CASTG 2 cut(s) 291, 730
VneI GTGCAC 1 cut(s) 412
VpaK11BI GGWCC 3 cut(s) 100, 268, 679
XapI RAATTY 4 cut(s) 169, 203, 1344, 1589
XbaI TCTAGA 1 cut(s) 451
XceI RCATGY 1 cut(s) 254
XcmI CCANNNNNNNNNTGG 1 cut(s) 233
XmaJI CCTAGG 2 cut(s) 209, 1583
XmiI GTMKAC 2 cut(s) 1174, 1275
XmnI GAANNNNTTC 2 cut(s) 50, 544
XspI CTAG 7 cut(s) 210, 438, 452, 1584, 1659, 1895, 1938
ZrmI AGTACT 1 cut(s) 641
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.