Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0001573

Physical Location & Seq

Genomic Coordinates Forward (+)

32643963 .. 32645993

Gene Structure 2031 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1222700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2031 bp

ATGGTGCAGCATAACTTTAAGAAGATGACTGTTGTACCAAATGGGAAGGACTTCATTGACATAATCCTATCTCGCACCCAGCGGCAGACCCCAACTGTAGTCCACAAGGGTTATGCAATTTCCCGCCTTCGTCAGTTCTATATGCGCAAGGTGAAATATACCCAACAGAATTTTCATGAGAAGCTCTCCACAATTATTGATGAGTTTCCTAGGCTTGATGATATCCACCCTTTCTATGGCGACCTTCTTCATGTTCTCTACAACAAAGATCACTTCAAGCTTGCACTGGGCCAAATCAATGCTGCAAGGACCCTTATTGGAAAGATTTCTAAAGACTATGTGAAATTGTTGAAGTATGGTAATTCACTTTACCGAAGCAAATGTCTCAAGGTCGCTGCTCTTGGCCGTATGTGCACGGTGATAAAGAGGATCGGTCCTAGTTTAGCTTATCTAGAACAAATTAGGCAACACATGGCAAGGCTACCTTCAATTGACCCTAATACCAGGACAGTATTGATTTGTGGGTATCCAAATGTTGGAAAGAGTTCATTCATTAACAAGATTACTAGGGCTGATGTGGATATCCAGCCCTATGCTTTTACCACCAAATCACTCTTCGTGGGACATACAGATTATAAATACTTGAGGTACCAGGTAATTGATACGCCGGGGATTTTGGACCGACCTTTTGAAGACCGTAATATAATTGAGATGTGCAGCATCACAGCTCTGGCCCACTTGAGAGCTGCGGTGTTGTTCTTCTTGGATATCTCGGGGTCTTGTGGGTACAACATTGCCCAACAGGCATCTCTTTTTCACAGCATTAAGTCTCTATTTATGAACAAACCACTGATTATAGTCTGCAACAAGACTGACTTGCAGCCACTGGAGGGCATATCCGAGGAAGACAAGAAGTTGGTCGCAGAGATGAAAAATGAAGCAATGAAGACAGTGATTGGTCAAGGAGGTGAGGCTACAAACGATGAGGGGGTACTCTTGACCATGAGCACTTTGACCGAGGAAGGGGTGATTTCTGTAAAGAATGCAGCTTGTGAGAGGTTGTTGAATCAGAGAGTAGAATTGAAGATGAAATCGAAAAAAATAAATGAATGCTTAAATCGTTTTCATGTTGCATTGCCAAAGCCTCGGGACAGCAAGGAAAGGCCCCCGTGTATACCTCAGGCAGTTTTAGAGGCTAAGTCTAAGCAAGCAGCGGAGAAGGAAAAGAGGACTACAGAAAGGGATTTGGAGAATGAGAATGGCGGTGCTGGTGTGTACTCTGCCAGTTTGAAGAAGCACTATATCTTAGCTAATGACGAATGGAAAGAGGATGTCATGCCAGAAATTCTTGATGGGTACAATGTATGTGACTTTGTTGATCCTGATATATTTCACAGGCTTAAGGAGTTGGAACGAGAAGAAGGACTCCGGCACAAAGAGCAGGGTGATGATGATTTTGAGATGGATGCATTGAAACTGACTCCAGAAGAGCAAAAGATGTTGGCGGGGATAAGGAAAAAGAGAAGCAAGTTCATTCAACAACATAGAATCAAGAAGAGTACAGCAGAGAGTCGACCAATTGTACCAAGGAAATTCAACAAGGATAGGGAGTTCACAACAAAGAGAATGGGGAGGCAGCTTACAAAGTTGGGGATTGATCCTACTATGGCAATTAATCGAGCCCGAAGCAGATCTGTCTCCAAGGGTCGGAAGAGGGAGCGATCAGTTGACGGGGGTGATACTGATGGTGGGGATGCTATGGACATGGATGTTGATGCACCCAACAAGAAGCAGCTCATGTTATCTAGATCCCGCTCCCGCTCAAGATCAAGGCCTCCAACTGAAGTTGTCCCTGGAGAGGGCTTCAAGGACTCTTCCCAAAAGGCCAAGGCAATAAAGAAGGCCAGGAAATCTAATACGATGCGAAACAAGAATGCTCGTCGTGGAGAGGCTGATAGGGTCATTCCCACTTTAAAGCCAAAGCACTTGTTTTCTGGAAAACGATCAATTGGAAAAACTCAAAGGCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0016020

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

MMR_HSR1 NOG1 NOGCT

Protein Analysis

677

Amino Acids

77.08

Weight (kDa)

9.75

Isoelectric Point (pI)

44.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NOG1_N	PF17835	6 - 165	1.3e-59	NOG1 N-terminal helical domain
FeoB_N	PF02421	170 - 319	9.7e-10	Ferrous iron transport protein B
MMR_HSR1	PF01926	171 - 290	8.2e-18	50S ribosome-binding GTPase
NOG1	PF06858	236 - 292	5.3e-25	Nucleolar GTP-binding protein 1 (NOG1)
NOGCT	PF08155	410 - 463	1.9e-26	NOGCT (NUC087) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001573)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10300 AT1G10300 AT1G10300 AT1G50920
fragaria_vesca	FvH4_3g28930 FvH4_3g28930 FvH4_6g37740
malus_domestica	MD06G1031200.v1.1 MD11G1222700.v1.1 MD16G1277600.v1.1
prunus_persica	Prupe.1G572400_v2.0.a1 Prupe.1G572400_v2.0.a1 Prupe.1G572400_v2.0.a1 Prupe.4G247400_v2.0.a1 Prupe.5G045700_v2.0.a1 Prupe.5G046000_v2.0.a1 Prupe.5G046000_v2.0.a1 Prupe.6G149400_v2.0.a1
pyrus_communis	pycom03g13360 pycom06g02600 pycom11g16960 pycom11g19650
rosa_chinensis	RchiOBHm_Chr3g0491451 RchiOBHm_Chr5g0051831 RchiOBHm_Chr5g0051911
rosa_laevigata	RLG00000034859 RLG00000034861
rosa_multiflora	Rmu_co8440613.1_g000002 Rmu_sc0001267.1_g000040
rosa_roxburghii	Rroxscaffold_1G00027370 Rroxscaffold_1G00027400
rosa_rugosa	Rorug03G0248800 Rorug03G0248800 Rorug03G0249700 Rorug05G0276600 Rorug05G0276700 Rorug05G0276800
rosa_samantha	Rh3AG298700 Rh3DG332500 Rh3DG333200 Rh5AG348600 Rh5AG348900 Rh5BG359100 Rh5BG359200 Rh5BG359900 Rh5CG384700 Rh5CG384900 Rh5DG374600
rosa_wichuraiana	Rw3G026370 Rw5G032900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	636
Acc16I	TGCGCA	1 cut(s)	146
Acc65I	GGTACC	1 cut(s)	648
AccB1I	GGYRCC	1 cut(s)	648
AccB7I	CCANNNNNTGG	1 cut(s)	536
AccBSI	CCGCTC	2 cut(s)	1815, 1821
AccI	GTMKAC	2 cut(s)	1174, 1573
AciI	CCGC	8 cut(s)	82, 124, 749, 1214, 1263, 1505, 1813, 1819
AclWI	GGATC	4 cut(s)	437, 1373, 1652, 1803
AcoI	YGGCCR	1 cut(s)	403
AcsI	RAATTY	3 cut(s)	169, 1344, 1592
AcuI	CTGAAG	1 cut(s)	1863
AfaI	GTAC	8 cut(s)	36, 650, 788, 993, 1277, 1358, 1561, 1584
AfiI	CCNNNNNNNGG	7 cut(s)	236, 536, 890, 1023, 1707, 1858, 1859
AflII	CTTAAG	1 cut(s)	1400
AjnI	CCWGG	4 cut(s)	503, 651, 1852, 1904
AjuI	GAANNNNNNNTTGG	4 cut(s)	156, 188, 599, 631
AloI	GAACNNNNNNTCC	2 cut(s)	1595, 1627
AluBI	AGCT	9 cut(s)	184, 280, 446, 728, 746, 1049, 1310, 1639, 1795
AluI	AGCT	9 cut(s)	184, 280, 446, 728, 746, 1049, 1310, 1639, 1795
Alw21I	GWGCWC	2 cut(s)	416, 1010
Alw26I	GTCTC	3 cut(s)	389, 834, 1702
Alw44I	GTGCAC	1 cut(s)	412
AlwI	GGATC	4 cut(s)	437, 1373, 1652, 1803
AlwNI	CAGNNNCTG	1 cut(s)	886
Ama87I	CYCGRG	2 cut(s)	772, 1146
AoxI	GGCC	7 cut(s)	289, 403, 732, 1163, 1832, 1884, 1902
ApaLI	GTGCAC	1 cut(s)	412
ApoI	RAATTY	3 cut(s)	169, 1344, 1592
ArsI	GACNNNNNNTTYG	4 cut(s)	367, 399, 671, 703
AseI	ATTAAT	1 cut(s)	1674
Asp700I	GAANNNNTTC	3 cut(s)	50, 325, 544
Asp718I	GGTACC	1 cut(s)	648
AspA2I	CCTAGG	1 cut(s)	209
AspLEI	GCGC	2 cut(s)	147, 2028
AspS9I	GGNCC	6 cut(s)	289, 309, 434, 679, 733, 1164
AsuC2I	CCSGG	1 cut(s)	669
AsuHPI	GGTGA	6 cut(s)	163, 430, 980, 1039, 1457, 1748
AvaI	CYCGRG	2 cut(s)	772, 1146
AvaII	GGWCC	3 cut(s)	309, 434, 679
AvrII	CCTAGG	1 cut(s)	209
AxyI	CCTNAGG	1 cut(s)	1179
BaeGI	GKGCMC	1 cut(s)	416
BaeI	ACNNNNGTAYC	2 cut(s)	18, 51
BanI	GGYRCC	1 cut(s)	648
BanII	GRGCYC	1 cut(s)	1684
BbsI	GAAGAC	3 cut(s)	699, 912, 953
Bbv12I	GWGCWC	2 cut(s)	416, 1010
BccI	CCATC	3 cut(s)	1346, 1456, 1739
BceAI	ACGGC	1 cut(s)	390
BciT130I	CCWGG	4 cut(s)	505, 653, 1854, 1906
BciVI	GTATCC	1 cut(s)	537
BcnI	CCSGG	1 cut(s)	669
BcoDI	GTCTC	3 cut(s)	389, 834, 1702
BfaI	CTAG	5 cut(s)	210, 438, 452, 567, 1806
BfmI	CTRYAG	2 cut(s)	96, 1233
BfoI	RGCGCY	1 cut(s)	2029
BfrI	CTTAAG	1 cut(s)	1400
BfuI	GTATCC	1 cut(s)	537
BglI	GCCNNNNNGGC	1 cut(s)	803
BglII	AGATCT	1 cut(s)	1691
BlnI	CCTAGG	1 cut(s)	209
Bme1390I	CCNGG	5 cut(s)	505, 653, 669, 1854, 1906
Bme18I	GGWCC	3 cut(s)	309, 434, 679
BmeT110I	CYCGRG	2 cut(s)	772, 1146
BmgT120I	GGNCC	6 cut(s)	289, 309, 434, 679, 733, 1164
BmiI	GGNNCC	3 cut(s)	311, 650, 1166
BmrFI	CCNGG	5 cut(s)	505, 653, 669, 1854, 1906
BmrI	ACTGGG	1 cut(s)	296
BmsI	GCATC	6 cut(s)	729, 815, 1456, 1744, 1765, 1911
BmuI	ACTGGG	1 cut(s)	296
BpiI	GAAGAC	3 cut(s)	699, 912, 953
BplI	GAGNNNNNCTC	2 cut(s)	170, 202
BpmI	CTGGAG	3 cut(s)	908, 1467, 1875
BpuEI	CTTGAG	4 cut(s)	371, 664, 760, 1807
BpuMI	CCSGG	1 cut(s)	669
BsaJI	CCNNGG	9 cut(s)	209, 668, 900, 1017, 1145, 1586, 1701, 1852, 1887
Bsc4I	CCNNNNNNNGG	7 cut(s)	236, 536, 890, 1023, 1707, 1858, 1859
Bse1I	ACTGG	3 cut(s)	291, 891, 1284
Bse21I	CCTNAGG	1 cut(s)	1179
Bse3DI	GCAATG	3 cut(s)	792, 948, 1133
BseBI	CCWGG	4 cut(s)	505, 653, 1854, 1906
BseDI	CCNNGG	9 cut(s)	209, 668, 900, 1017, 1145, 1586, 1701, 1852, 1887
BseGI	GGATG	4 cut(s)	1336, 1471, 1759, 1774
BseLI	CCNNNNNNNGG	7 cut(s)	236, 536, 890, 1023, 1707, 1858, 1859
BseMI	GCAATG	3 cut(s)	792, 948, 1133
BseMII	CTCAG	1 cut(s)	1193
BseNI	ACTGG	3 cut(s)	291, 891, 1284
BseSI	GKGCMC	1 cut(s)	416
BseYI	CCCAGC	1 cut(s)	78
BsgI	GTGCAG	2 cut(s)	26, 736
BshFI	GGCC	7 cut(s)	291, 405, 734, 1165, 1834, 1886, 1904
BshNI	GGYRCC	1 cut(s)	648
BsiHKAI	GWGCWC	2 cut(s)	416, 1010
BsiHKCI	CYCGRG	2 cut(s)	772, 1146
BsiSI	CCGG	2 cut(s)	668, 1429
BslFI	GGGAC	3 cut(s)	636, 1163, 1835
BslI	CCNNNNNNNGG	7 cut(s)	236, 536, 890, 1023, 1707, 1858, 1859
BsmAI	GTCTC	3 cut(s)	389, 834, 1702
BsmFI	GGGAC	3 cut(s)	636, 1163, 1835
BsmI	GAATGC	3 cut(s)	1048, 1115, 1939
BsnI	GGCC	7 cut(s)	291, 405, 734, 1165, 1834, 1886, 1904
BsoBI	CYCGRG	2 cut(s)	772, 1146
Bsp1286I	GDGCHC	3 cut(s)	416, 1010, 1684
Bsp143I	GATC	9 cut(s)	268, 429, 1378, 1657, 1691, 1721, 1808, 1826, 2003
BspACI	CCGC	8 cut(s)	82, 124, 749, 1214, 1263, 1505, 1813, 1819
BspANI	GGCC	7 cut(s)	291, 405, 734, 1165, 1834, 1886, 1904
BspCNI	CTCAG	1 cut(s)	1192
BspHI	TCATGA	1 cut(s)	175
BspLI	GGNNCC	3 cut(s)	311, 650, 1166
BspPI	GGATC	4 cut(s)	437, 1373, 1652, 1803
BspQI	GCTCTTC	1 cut(s)	1482
BspT107I	GGYRCC	1 cut(s)	648
BspTI	CTTAAG	1 cut(s)	1400
BsrBI	CCGCTC	2 cut(s)	1815, 1821
BsrDI	GCAATG	3 cut(s)	792, 948, 1133
BsrI	ACTGG	3 cut(s)	291, 891, 1284
BssECI	CCNNGG	9 cut(s)	209, 668, 900, 1017, 1145, 1586, 1701, 1852, 1887
BssMI	GATC	9 cut(s)	268, 429, 1378, 1657, 1691, 1721, 1808, 1826, 2003
BssNAI	GTATAC	1 cut(s)	1175
BssT1I	CCWWGG	4 cut(s)	209, 1586, 1701, 1887
Bst1107I	GTATAC	1 cut(s)	1175
Bst2UI	CCWGG	4 cut(s)	505, 653, 1854, 1906
Bst4CI	ACNGT	6 cut(s)	31, 97, 418, 511, 698, 952
Bst6I	CTCTTC	5 cut(s)	620, 1482, 1550, 1706, 1879
BstAFI	CTTAAG	1 cut(s)	1400
BstC8I	GCNNGC	2 cut(s)	282, 1209
BstDEI	CTNAG	4 cut(s)	1179, 1197, 1203, 1306
BstF5I	GGATG	4 cut(s)	1336, 1471, 1759, 1774
BstH2I	RGCGCY	1 cut(s)	2029
BstHHI	GCGC	2 cut(s)	147, 2028
BstKTI	GATC	9 cut(s)	271, 432, 1381, 1660, 1694, 1724, 1811, 1829, 2006
BstMAI	GTCTC	3 cut(s)	389, 834, 1702
BstMBI	GATC	9 cut(s)	268, 429, 1378, 1657, 1691, 1721, 1808, 1826, 2003
BstMWI	GCNNNNNNNGC	3 cut(s)	411, 803, 1438
BstNI	CCWGG	4 cut(s)	505, 653, 1854, 1906
BstSCI	CCNGG	5 cut(s)	503, 651, 667, 1852, 1904
BstSFI	CTRYAG	2 cut(s)	96, 1233
BstSLI	GKGCMC	1 cut(s)	416
BstV2I	GAAGAC	3 cut(s)	699, 912, 953
BstX2I	RGATCY	2 cut(s)	1691, 1808
BstYI	RGATCY	2 cut(s)	1691, 1808
BstZ17I	GTATAC	1 cut(s)	1175
Bsu36I	CCTNAGG	1 cut(s)	1179
BsuI	GTATCC	1 cut(s)	537
BsuRI	GGCC	7 cut(s)	291, 405, 734, 1165, 1834, 1886, 1904
BtsCI	GGATG	4 cut(s)	1336, 1471, 1759, 1774
BtsIMutI	CAGTG	4 cut(s)	284, 848, 884, 957
Cac8I	GCNNGC	2 cut(s)	282, 1209
CaiI	CAGNNNCTG	1 cut(s)	886
CciI	TCATGA	1 cut(s)	175
CfoI	GCGC	2 cut(s)	147, 2028
Cfr13I	GGNCC	6 cut(s)	289, 309, 434, 679, 733, 1164
CsiI	ACCWGGT	1 cut(s)	651
Csp6I	GTAC	8 cut(s)	35, 649, 787, 992, 1276, 1357, 1560, 1583
CspCI	CAANNNNNGTGG	2 cut(s)	178, 213
CviAII	CATG	8 cut(s)	176, 251, 472, 1003, 1127, 1336, 1765, 1798
CviQI	GTAC	8 cut(s)	35, 649, 787, 992, 1276, 1357, 1560, 1583
DdeI	CTNAG	4 cut(s)	1179, 1197, 1203, 1306
DpnI	GATC	9 cut(s)	270, 431, 1380, 1659, 1693, 1723, 1810, 1828, 2005
DpnII	GATC	9 cut(s)	268, 429, 1378, 1657, 1691, 1721, 1808, 1826, 2003
DraI	TTTAAA	1 cut(s)	1974
EaeI	YGGCCR	1 cut(s)	403
Eam1104I	CTCTTC	5 cut(s)	620, 1482, 1550, 1706, 1879
EarI	CTCTTC	5 cut(s)	620, 1482, 1550, 1706, 1879
Eco130I	CCWWGG	4 cut(s)	209, 1586, 1701, 1887
Eco147I	AGGCCT	1 cut(s)	1834
Eco24I	GRGCYC	1 cut(s)	1684
Eco32I	GATATC	3 cut(s)	223, 583, 769
Eco47I	GGWCC	3 cut(s)	309, 434, 679
Eco57I	CTGAAG	1 cut(s)	1863
Eco81I	CCTNAGG	1 cut(s)	1179
Eco88I	CYCGRG	2 cut(s)	772, 1146
EcoO109I	RGGNCCY	2 cut(s)	309, 1164
EcoRII	CCWGG	4 cut(s)	503, 651, 1852, 1904
EcoRV	GATATC	3 cut(s)	223, 583, 769
EcoT14I	CCWWGG	4 cut(s)	209, 1586, 1701, 1887
EcoT22I	ATGCAT	1 cut(s)	1471
EcoT38I	GRGCYC	1 cut(s)	1684
ErhI	CCWWGG	4 cut(s)	209, 1586, 1701, 1887
FaeI	CATG	8 cut(s)	179, 254, 475, 1006, 1130, 1339, 1768, 1801
FalI	AAGNNNNNCTT	4 cut(s)	469, 501, 860, 892
FaqI	GGGAC	3 cut(s)	636, 1163, 1835
FatI	CATG	8 cut(s)	175, 250, 471, 1002, 1126, 1335, 1764, 1797
FauI	CCCGC	4 cut(s)	131, 1498, 1820, 1826
FblI	GTMKAC	2 cut(s)	1174, 1573
FokI	GGATG	4 cut(s)	1343, 1478, 1766, 1781
FriOI	GRGCYC	1 cut(s)	1684
FspBI	CTAG	5 cut(s)	210, 438, 452, 567, 1806
FspI	TGCGCA	1 cut(s)	146
GlaI	GCGC	2 cut(s)	146, 2027
GsaI	CCCAGC	1 cut(s)	82
GsuI	CTGGAG	3 cut(s)	908, 1467, 1875
HaeII	RGCGCY	1 cut(s)	2029
HaeIII	GGCC	7 cut(s)	291, 405, 734, 1165, 1834, 1886, 1904
HapII	CCGG	2 cut(s)	668, 1429
HhaI	GCGC	2 cut(s)	147, 2028
Hin1II	CATG	8 cut(s)	179, 254, 475, 1006, 1130, 1339, 1768, 1801
Hin6I	GCGC	2 cut(s)	145, 2026
HinP1I	GCGC	2 cut(s)	145, 2026
HincII	GTYRAC	2 cut(s)	1574, 1729
HindII	GTYRAC	2 cut(s)	1574, 1729
HindIII	AAGCTT	1 cut(s)	278
HinfI	GANTC	6 cut(s)	1066, 1425, 1480, 1548, 1570, 1871
HpaII	CCGG	2 cut(s)	668, 1429
HphI	GGTGA	6 cut(s)	163, 430, 980, 1039, 1457, 1748
Hpy166II	GTNNAC	7 cut(s)	103, 414, 1175, 1276, 1574, 1614, 1729
Hpy188I	TCNGA	3 cut(s)	901, 1071, 1710
Hpy8I	GTNNAC	7 cut(s)	103, 414, 1175, 1276, 1574, 1614, 1729
Hpy99I	CGWCG	1 cut(s)	1944
HpyAV	CCTTC	8 cut(s)	40, 137, 254, 495, 1016, 1213, 1415, 1894
HpyCH4III	ACNGT	6 cut(s)	31, 97, 418, 511, 698, 952
HpyF10VI	GCNNNNNNNGC	3 cut(s)	411, 803, 1438
HpyF3I	CTNAG	4 cut(s)	1179, 1197, 1203, 1306
Hsp92II	CATG	8 cut(s)	179, 254, 475, 1006, 1130, 1339, 1768, 1801
HspAI	GCGC	2 cut(s)	145, 2026
KpnI	GGTACC	1 cut(s)	652
Kzo9I	GATC	9 cut(s)	268, 429, 1378, 1657, 1691, 1721, 1808, 1826, 2003
LguI	GCTCTTC	1 cut(s)	1482
LmnI	GCTCC	2 cut(s)	1717, 1820
LweI	GCATC	6 cut(s)	729, 815, 1456, 1744, 1765, 1911
MabI	ACCWGGT	1 cut(s)	651
MaeI	CTAG	5 cut(s)	210, 438, 452, 567, 1806
MaeIII	GTNAC	1 cut(s)	1367
MalI	GATC	9 cut(s)	270, 431, 1380, 1659, 1693, 1723, 1810, 1828, 2005
MbiI	CCGCTC	2 cut(s)	1815, 1821
MboI	GATC	9 cut(s)	268, 429, 1378, 1657, 1691, 1721, 1808, 1826, 2003
MfeI	CAATTG	3 cut(s)	489, 1578, 2007
MflI	RGATCY	2 cut(s)	1691, 1808
MhlI	GDGCHC	3 cut(s)	416, 1010, 1684
MlyI	GAGTC	4 cut(s)	1419, 1474, 1579, 1865
MmeI	TCCRAC	4 cut(s)	517, 1389, 1688, 1862
Mph1103I	ATGCAT	1 cut(s)	1471
MroXI	GAANNNNTTC	3 cut(s)	50, 325, 544
MseI	TTAA	7 cut(s)	18, 555, 825, 1115, 1401, 1674, 1973
MspA1I	CMGCKG	2 cut(s)	82, 1214
MspCI	CTTAAG	1 cut(s)	1400
MspI	CCGG	2 cut(s)	668, 1429
MspR9I	CCNGG	5 cut(s)	505, 653, 669, 1854, 1906
MunI	CAATTG	3 cut(s)	489, 1578, 2007
Mva1269I	GAATGC	3 cut(s)	1048, 1115, 1939
MvaI	CCWGG	4 cut(s)	505, 653, 1854, 1906
MwoI	GCNNNNNNNGC	3 cut(s)	411, 803, 1438
NciI	CCSGG	1 cut(s)	669
NdeII	GATC	9 cut(s)	268, 429, 1378, 1657, 1691, 1721, 1808, 1826, 2003
NlaIII	CATG	8 cut(s)	179, 254, 475, 1006, 1130, 1339, 1768, 1801
NlaIV	GGNNCC	3 cut(s)	311, 650, 1166
NmuCI	GTSAC	1 cut(s)	1367
NsbI	TGCGCA	1 cut(s)	146
NsiI	ATGCAT	1 cut(s)	1471
PagI	TCATGA	1 cut(s)	175
PceI	AGGCCT	1 cut(s)	1834
PciSI	GCTCTTC	1 cut(s)	1482
PctI	GAATGC	3 cut(s)	1048, 1115, 1939
PdmI	GAANNNNTTC	3 cut(s)	50, 325, 544
PfeI	GAWTC	2 cut(s)	1066, 1548
PflMI	CCANNNNNTGG	1 cut(s)	536
PleI	GAGTC	4 cut(s)	1419, 1474, 1578, 1865
PpsI	GAGTC	4 cut(s)	1419, 1474, 1578, 1865
PpuMI	RGGWCCY	1 cut(s)	309
PshBI	ATTAAT	1 cut(s)	1674
PsiI	TTATAA	1 cut(s)	636
Psp5II	RGGWCCY	1 cut(s)	309
Psp6I	CCWGG	4 cut(s)	503, 651, 1852, 1904
PspFI	CCCAGC	1 cut(s)	78
PspGI	CCWGG	4 cut(s)	503, 651, 1852, 1904
PspN4I	GGNNCC	3 cut(s)	311, 650, 1166
PspPI	GGNCC	6 cut(s)	289, 309, 434, 679, 733, 1164
PspPPI	RGGWCCY	1 cut(s)	309
PstNI	CAGNNNCTG	1 cut(s)	886
PsuI	RGATCY	2 cut(s)	1691, 1808
RsaI	GTAC	8 cut(s)	36, 650, 788, 993, 1277, 1358, 1561, 1584
RsaNI	GTAC	8 cut(s)	35, 649, 787, 992, 1276, 1357, 1560, 1583
SalI	GTCGAC	1 cut(s)	1572
SapI	GCTCTTC	1 cut(s)	1482
SaqAI	TTAA	7 cut(s)	18, 555, 825, 1115, 1401, 1674, 1973
Sau3AI	GATC	9 cut(s)	268, 429, 1378, 1657, 1691, 1721, 1808, 1826, 2003
Sau96I	GGNCC	6 cut(s)	289, 309, 434, 679, 733, 1164
SchI	GAGTC	4 cut(s)	1419, 1474, 1579, 1865
ScrFI	CCNGG	5 cut(s)	505, 653, 669, 1854, 1906
SduI	GDGCHC	3 cut(s)	416, 1010, 1684
SexAI	ACCWGGT	1 cut(s)	651
SfaNI	GCATC	6 cut(s)	729, 815, 1456, 1744, 1765, 1911
SfcI	CTRYAG	2 cut(s)	96, 1233
SinI	GGWCC	3 cut(s)	309, 434, 679
SmlI	CTYRAG	5 cut(s)	386, 643, 739, 1400, 1822
SmoI	CTYRAG	5 cut(s)	386, 643, 739, 1400, 1822
SseBI	AGGCCT	1 cut(s)	1834
SsiI	CCGC	8 cut(s)	82, 124, 749, 1214, 1263, 1505, 1813, 1819
SspMI	CTAG	5 cut(s)	210, 438, 452, 567, 1806
StuI	AGGCCT	1 cut(s)	1834
StyD4I	CCNGG	5 cut(s)	503, 651, 667, 1852, 1904
StyI	CCWWGG	4 cut(s)	209, 1586, 1701, 1887
TaaI	ACNGT	6 cut(s)	31, 97, 418, 511, 698, 952
TaqI	TCGA	3 cut(s)	1094, 1573, 1678
TaqII	GACCGA	3 cut(s)	422, 696, 1031
TatI	WGTACW	2 cut(s)	1275, 1559
TauI	GCSGC	1 cut(s)	85
TfiI	GAWTC	2 cut(s)	1066, 1548
Tru1I	TTAA	7 cut(s)	18, 555, 825, 1115, 1401, 1674, 1973
Tru9I	TTAA	7 cut(s)	18, 555, 825, 1115, 1401, 1674, 1973
TscAI	CASTG	4 cut(s)	291, 855, 891, 957
TseFI	GTSAC	1 cut(s)	1367
Tsp45I	GTSAC	1 cut(s)	1367
TspRI	CASTG	4 cut(s)	291, 855, 891, 957
Van91I	CCANNNNNTGG	1 cut(s)	536
Vha464I	CTTAAG	1 cut(s)	1400
VneI	GTGCAC	1 cut(s)	412
VpaK11BI	GGWCC	3 cut(s)	309, 434, 679
VspI	ATTAAT	1 cut(s)	1674
XapI	RAATTY	3 cut(s)	169, 1344, 1592
XbaI	TCTAGA	2 cut(s)	451, 1805
XcmI	CCANNNNNNNNNTGG	1 cut(s)	233
XmaJI	CCTAGG	1 cut(s)	209
XmiI	GTMKAC	2 cut(s)	1174, 1573
XmnI	GAANNNNTTC	3 cut(s)	50, 325, 544
XspI	CTAG	5 cut(s)	210, 438, 452, 567, 1806
Zsp2I	ATGCAT	1 cut(s)	1471

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.