Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001370

Physical Location & Seq

Genomic Coordinates Reverse (-)

4833396 .. 4835089

Gene Structure 1694 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G14120.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 939 bp

ATGGCGGAAGTAAATGGAGTCATTCCAACAATAGACTTGGAAGAGGTTAATGATCAGATTCTGAATGAGAAAATCCGTGAAGCGAGTGAGAGATGGGGATGTTTCACGGTGATAAACCATGGAGTTTCTTTGTCTTTGATGGCTGAGATGAAGAAGACTGTTAGAGATCTCCATGAACGTCCATATGAGATGAAACTGCGAAACACCGATGTGTTACTAGGGAATGGTTACAAGCCTCTAAGTGAGTTCAATCCTTTTTATGAATCATTTGGTCTTTTTGACATGGCATCTCCTCAAGCTGTCAATAGTTTTTGTGATAAACTCGACGCCTCGCCAGATCAAAGGGAGATTTTGCTAAAGTATGCAAAAGCTACTGATGATCTTGCGAGGAGTCTAGCAAGGAGATTAGCGGAGAGCTACGGAGTGGTAGAGCCCAATTTTTTGAGAGGATGGCCAAGCCAATTTCGGATGAACAAATATCATTTTAAACCGGATTCTGTTGGAAAACTCGGTGTGATATTACACACGGATCCTGGTTTCTTGACAATTCTTCAAGGTGATGAGGATGTTGGTGGACTTGAAGCCATGGACAACTCTTCAGGATCCTTTTTCCCCATACACACATTGCCGAACACGCTTCTTGTCAACCTTGGTGACATGGCTACGATATGGAGCAATGGAAGGTTATGCAATGTGAAGCATAGAGTGCAATGCATAGAGGCAAAAATGAGGATTACTATTGCTTCGTTCCTATTAGGACCAGTGGATAGAGATCTTGAAGCTCCAGATGAATTTGTGGATGCTGAACATCCGCGACTATACAAGCCTATCAGTGACGGAGGACTAAGAAAGATTAGACTTAGCAAGCATCTTCATGCTGGCGAATCTCTCAAGTTCATAACCATAAATGAGTTAAGTGACGTCCCAAAGATAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009056 GO:0009058 GO:0009314 GO:0009416 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009850 GO:0009852 GO:0009987 GO:0010033 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016491 GO:0016705 GO:0016706 GO:0016707 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0042447 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0046394 GO:0050789 GO:0050794 GO:0050896 GO:0051213 GO:0051716 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

312

Amino Acids

35.12

Weight (kDa)

5.54

Isoelectric Point (pI)

32.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DIOX_N	PF14226	8 - 70	9.8e-13	non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy	PF03171	153 - 251	3.7e-23	2OG-Fe(II) oxygenase superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001370)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14120 AT1G14120 AT1G14120 AT1G14130
fragaria_vesca	FvH4_1g09830 FvH4_4g14690 FvH4_5g26050
malus_domestica	MD02G1106500.v1.1 MD02G1107000.v1.1 MD05G1342700.v1.1 MD10G1316500.v1.1 MD15G1226200.v1.1 MD15G1226300.v1.1
prunus_persica	Prupe.7G188800_v2.0.a1
pyrus_communis	pycom02g08450 pycom02g08500 pycom02g08590 pycom10g26850 pycom10g26880 pycom15g20120
rosa_chinensis	RchiOBHm_Chr2g0096111 RchiOBHm_Chr2g0096611 RchiOBHm_Chr6g0310881
rosa_laevigata	RLG00000010454 RLG00000012686 RLG00000016626 RLG00000016655
rosa_multiflora	Rmu_co8407901.1_g000001 Rmu_sc0003565.1_g000008 Rmu_sc0005996.1_g000007 Rmu_ssc0000395.1_g000003
rosa_roxburghii	Rroxscaffold_2G00145480 Rroxscaffold_2G00145740 Rroxscaffold_7G00158220
rosa_rugosa	Rorug02G0057300 Rorug02G0058900 Rorug06G0169900 Rorug06G0383800
rosa_samantha	Rh2AG104100 Rh2AG106300 Rh2BG106200 Rh2BG108700 Rh2CG108100 Rh2CG110400 Rh2DG106800 Rh2DG110000 Rh6AG497500 Rh6BG507600 Rh6CG513600 Rh6DG500200
rosa_wichuraiana	Rw2G008000 Rw2G008230 Rw6G043330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	924
AccII	CGCG	1 cut(s)	814
AciI	CCGC	3 cut(s)	5, 410, 812
AclWI	GGATC	4 cut(s)	524, 537, 597, 610
AcoI	YGGCCR	1 cut(s)	452
AcsI	RAATTY	1 cut(s)	791
AcuI	CTGAAG	1 cut(s)	582
AcyI	GRCGYC	2 cut(s)	327, 921
AgsI	TTSAA	4 cut(s)	250, 554, 581, 779
AjnI	CCWGG	1 cut(s)	532
AleI	CACNNNNGTG	1 cut(s)	209
AluBI	AGCT	4 cut(s)	299, 371, 417, 782
AluI	AGCT	4 cut(s)	299, 371, 417, 782
AlwI	GGATC	4 cut(s)	524, 537, 597, 610
AlwNI	CAGNNNCTG	1 cut(s)	61
AoxI	GGCC	1 cut(s)	452
ApoI	RAATTY	1 cut(s)	791
AspS9I	GGNCC	1 cut(s)	758
AsuHPI	GGTGA	3 cut(s)	121, 569, 665
AvaII	GGWCC	1 cut(s)	758
BalI	TGGCCA	1 cut(s)	454
BamHI	GGATCC	2 cut(s)	529, 602
BanII	GRGCYC	1 cut(s)	435
BbsI	GAAGAC	1 cut(s)	161
BccI	CCATC	3 cut(s)	87, 133, 444
BciT130I	CCWGG	1 cut(s)	534
BclI	TGATCA	1 cut(s)	52
BfaI	CTAG	2 cut(s)	218, 395
BglII	AGATCT	2 cut(s)	166, 772
Bme1390I	CCNGG	1 cut(s)	534
Bme18I	GGWCC	1 cut(s)	758
BmgT120I	GGNCC	1 cut(s)	758
BmiI	GGNNCC	2 cut(s)	531, 604
BmrFI	CCNGG	1 cut(s)	534
BmsI	GCATC	3 cut(s)	296, 790, 877
BpiI	GAAGAC	1 cut(s)	161
BpmI	CTGGAG	1 cut(s)	768
BpuEI	CTTGAG	2 cut(s)	279, 875
BsaBI	GATNNNNATC	1 cut(s)	771
BsaHI	GRCGYC	2 cut(s)	327, 921
BsaJI	CCNNGG	3 cut(s)	118, 585, 649
BsaWI	WCCGGW	1 cut(s)	490
Bse1I	ACTGG	1 cut(s)	761
Bse3DI	GCAATG	4 cut(s)	623, 682, 697, 716
Bse8I	GATNNNNATC	1 cut(s)	771
BseBI	CCWGG	1 cut(s)	534
BseDI	CCNNGG	3 cut(s)	118, 585, 649
BseGI	GGATG	6 cut(s)	104, 455, 474, 571, 805, 808
BseJI	GATNNNNATC	1 cut(s)	771
BseMI	GCAATG	4 cut(s)	623, 682, 697, 716
BseMII	CTCAG	1 cut(s)	135
BseNI	ACTGG	1 cut(s)	761
BseRI	GAGGAG	2 cut(s)	282, 403
Bsh1236I	CGCG	1 cut(s)	814
BshFI	GGCC	1 cut(s)	454
BsiSI	CCGG	1 cut(s)	491
BslFI	GGGAC	1 cut(s)	908
BsmFI	GGGAC	1 cut(s)	908
BsnI	GGCC	1 cut(s)	454
Bsp1286I	GDGCHC	1 cut(s)	435
Bsp143I	GATC	7 cut(s)	52, 166, 337, 379, 529, 602, 772
Bsp19I	CCATGG	2 cut(s)	118, 585
BspACI	CCGC	3 cut(s)	5, 410, 812
BspANI	GGCC	1 cut(s)	454
BspCNI	CTCAG	1 cut(s)	136
BspFNI	CGCG	1 cut(s)	814
BspLI	GGNNCC	2 cut(s)	531, 604
BspPI	GGATC	4 cut(s)	524, 537, 597, 610
BsrDI	GCAATG	4 cut(s)	623, 682, 697, 716
BsrI	ACTGG	1 cut(s)	761
BssECI	CCNNGG	3 cut(s)	118, 585, 649
BssMI	GATC	7 cut(s)	52, 166, 337, 379, 529, 602, 772
BssNI	GRCGYC	2 cut(s)	327, 921
BssT1I	CCWWGG	3 cut(s)	118, 585, 649
Bst2UI	CCWGG	1 cut(s)	534
Bst4CI	ACNGT	2 cut(s)	109, 160
Bst6I	CTCTTC	2 cut(s)	36, 601
BstACI	GRCGYC	2 cut(s)	327, 921
BstAPI	GCANNNNNTGC	1 cut(s)	706
BstC8I	GCNNGC	2 cut(s)	866, 880
BstDEI	CTNAG	4 cut(s)	144, 239, 845, 860
BstDSI	CCRYGG	2 cut(s)	118, 585
BstF5I	GGATG	6 cut(s)	104, 455, 474, 571, 805, 808
BstFNI	CGCG	1 cut(s)	814
BstKTI	GATC	7 cut(s)	55, 169, 340, 382, 532, 605, 775
BstMBI	GATC	7 cut(s)	52, 166, 337, 379, 529, 602, 772
BstMWI	GCNNNNNNNGC	2 cut(s)	634, 706
BstNI	CCWGG	1 cut(s)	534
BstSCI	CCNGG	1 cut(s)	532
BstUI	CGCG	1 cut(s)	814
BstV2I	GAAGAC	1 cut(s)	161
BstX2I	RGATCY	4 cut(s)	166, 529, 602, 772
BstYI	RGATCY	4 cut(s)	166, 529, 602, 772
BsuRI	GGCC	1 cut(s)	454
BtgI	CCRYGG	2 cut(s)	118, 585
BtsCI	GGATG	6 cut(s)	104, 455, 474, 571, 805, 808
BtsIMutI	CAGTG	2 cut(s)	768, 838
Cac8I	GCNNGC	2 cut(s)	866, 880
CaiI	CAGNNNCTG	1 cut(s)	61
Cfr13I	GGNCC	1 cut(s)	758
CseI	GACGC	1 cut(s)	335
CviAII	CATG	6 cut(s)	119, 173, 283, 586, 658, 875
DdeI	CTNAG	4 cut(s)	144, 239, 845, 860
DpnI	GATC	7 cut(s)	54, 168, 339, 381, 531, 604, 774
DpnII	GATC	7 cut(s)	52, 166, 337, 379, 529, 602, 772
DraI	TTTAAA	1 cut(s)	487
EaeI	YGGCCR	1 cut(s)	452
Eam1104I	CTCTTC	2 cut(s)	36, 601
EarI	CTCTTC	2 cut(s)	36, 601
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	3 cut(s)	118, 585, 649
Eco24I	GRGCYC	1 cut(s)	435
Eco47I	GGWCC	1 cut(s)	758
Eco57I	CTGAAG	1 cut(s)	582
EcoRII	CCWGG	1 cut(s)	532
EcoT14I	CCWWGG	3 cut(s)	118, 585, 649
EcoT22I	ATGCAT	1 cut(s)	716
EcoT38I	GRGCYC	1 cut(s)	435
ErhI	CCWWGG	3 cut(s)	118, 585, 649
FaeI	CATG	6 cut(s)	122, 176, 286, 589, 661, 878
FaqI	GGGAC	1 cut(s)	908
FatI	CATG	6 cut(s)	118, 172, 282, 585, 657, 874
FauNDI	CATATG	1 cut(s)	184
FbaI	TGATCA	1 cut(s)	52
FokI	GGATG	6 cut(s)	111, 462, 481, 578, 795, 812
FriOI	GRGCYC	1 cut(s)	435
FspBI	CTAG	2 cut(s)	218, 395
GsuI	CTGGAG	1 cut(s)	768
HaeIII	GGCC	1 cut(s)	454
HapII	CCGG	1 cut(s)	491
HgaI	GACGC	1 cut(s)	335
Hin1I	GRCGYC	2 cut(s)	327, 921
Hin1II	CATG	6 cut(s)	122, 176, 286, 589, 661, 878
HincII	GTYRAC	1 cut(s)	646
HindII	GTYRAC	1 cut(s)	646
HinfI	GANTC	6 cut(s)	18, 58, 263, 391, 494, 884
HpaII	CCGG	1 cut(s)	491
HphI	GGTGA	3 cut(s)	121, 569, 665
Hpy166II	GTNNAC	2 cut(s)	575, 646
Hpy188I	TCNGA	3 cut(s)	57, 63, 468
Hpy188III	TCNNGA	4 cut(s)	541, 600, 776, 785
Hpy8I	GTNNAC	2 cut(s)	575, 646
Hpy99I	CGWCG	1 cut(s)	329
HpyAV	CCTTC	1 cut(s)	675
HpyCH4III	ACNGT	2 cut(s)	109, 160
HpyCH4IV	ACGT	2 cut(s)	178, 921
HpyCH4V	TGCA	4 cut(s)	365, 690, 709, 714
HpyF10VI	GCNNNNNNNGC	2 cut(s)	634, 706
HpyF3I	CTNAG	4 cut(s)	144, 239, 845, 860
HpySE526I	ACGT	2 cut(s)	178, 921
Hsp92I	GRCGYC	2 cut(s)	327, 921
Hsp92II	CATG	6 cut(s)	122, 176, 286, 589, 661, 878
Ksp22I	TGATCA	1 cut(s)	52
Kzo9I	GATC	7 cut(s)	52, 166, 337, 379, 529, 602, 772
LmnI	GCTCC	2 cut(s)	672, 787
LpnPI	CCDG	8 cut(s)	348, 504, 519, 546, 585, 774, 798, 864
LweI	GCATC	3 cut(s)	296, 790, 877
MaeI	CTAG	2 cut(s)	218, 395
MaeII	ACGT	2 cut(s)	178, 921
MaeIII	GTNAC	5 cut(s)	213, 227, 653, 833, 917
MalI	GATC	7 cut(s)	54, 168, 339, 381, 531, 604, 774
MboI	GATC	7 cut(s)	52, 166, 337, 379, 529, 602, 772
MboII	GAAGA	6 cut(s)	53, 163, 166, 542, 588, 863
MflI	RGATCY	4 cut(s)	166, 529, 602, 772
MhlI	GDGCHC	1 cut(s)	435
MlsI	TGGCCA	1 cut(s)	454
MluCI	AATT	4 cut(s)	436, 461, 546, 791
MluNI	TGGCCA	1 cut(s)	454
MlyI	GAGTC	2 cut(s)	27, 400
MmeI	TCCRAC	2 cut(s)	50, 481
Mox20I	TGGCCA	1 cut(s)	454
Mph1103I	ATGCAT	1 cut(s)	716
MscI	TGGCCA	1 cut(s)	454
MseI	TTAA	4 cut(s)	48, 486, 914, 937
MslI	CAYNNNNRTG	2 cut(s)	209, 873
Msp20I	TGGCCA	1 cut(s)	454
MspI	CCGG	1 cut(s)	491
MspR9I	CCNGG	1 cut(s)	534
MvaI	CCWGG	1 cut(s)	534
MvnI	CGCG	1 cut(s)	814
MwoI	GCNNNNNNNGC	2 cut(s)	634, 706
NcoI	CCATGG	2 cut(s)	118, 585
NdeI	CATATG	1 cut(s)	184
NdeII	GATC	7 cut(s)	52, 166, 337, 379, 529, 602, 772
NlaIII	CATG	6 cut(s)	122, 176, 286, 589, 661, 878
NlaIV	GGNNCC	2 cut(s)	531, 604
NmuCI	GTSAC	3 cut(s)	653, 833, 917
NsiI	ATGCAT	1 cut(s)	716
OliI	CACNNNNGTG	1 cut(s)	209
PfeI	GAWTC	4 cut(s)	58, 263, 494, 884
PleI	GAGTC	2 cut(s)	26, 399
PpsI	GAGTC	2 cut(s)	26, 399
Psp6I	CCWGG	1 cut(s)	532
PspGI	CCWGG	1 cut(s)	532
PspN4I	GGNNCC	2 cut(s)	531, 604
PspPI	GGNCC	1 cut(s)	758
PstNI	CAGNNNCTG	1 cut(s)	61
PsuI	RGATCY	4 cut(s)	166, 529, 602, 772
RseI	CAYNNNNRTG	2 cut(s)	209, 873
SaqAI	TTAA	4 cut(s)	48, 486, 914, 937
Sau3AI	GATC	7 cut(s)	52, 166, 337, 379, 529, 602, 772
Sau96I	GGNCC	1 cut(s)	758
SchI	GAGTC	2 cut(s)	27, 400
ScrFI	CCNGG	1 cut(s)	534
SduI	GDGCHC	1 cut(s)	435
SfaNI	GCATC	3 cut(s)	296, 790, 877
SinI	GGWCC	1 cut(s)	758
SmiMI	CAYNNNNRTG	2 cut(s)	209, 873
SmlI	CTYRAG	2 cut(s)	294, 890
SmoI	CTYRAG	2 cut(s)	294, 890
Sse9I	AATT	4 cut(s)	436, 461, 546, 791
SsiI	CCGC	3 cut(s)	5, 410, 812
SspMI	CTAG	2 cut(s)	218, 395
StyD4I	CCNGG	1 cut(s)	532
StyI	CCWWGG	3 cut(s)	118, 585, 649
TaaI	ACNGT	2 cut(s)	109, 160
TaiI	ACGT	2 cut(s)	181, 924
TaqI	TCGA	1 cut(s)	324
TasI	AATT	4 cut(s)	436, 461, 546, 791
TfiI	GAWTC	4 cut(s)	58, 263, 494, 884
Tru1I	TTAA	4 cut(s)	48, 486, 914, 937
Tru9I	TTAA	4 cut(s)	48, 486, 914, 937
TscAI	CASTG	2 cut(s)	768, 838
TseFI	GTSAC	3 cut(s)	653, 833, 917
Tsp45I	GTSAC	3 cut(s)	653, 833, 917
TspDTI	ATGAA	8 cut(s)	164, 189, 206, 276, 485, 804, 863, 886
TspGWI	ACGGA	4 cut(s)	65, 435, 542, 852
TspRI	CASTG	2 cut(s)	768, 838
VpaK11BI	GGWCC	1 cut(s)	758
XapI	RAATTY	1 cut(s)	791
XspI	CTAG	2 cut(s)	218, 395
ZraI	GACGTC	1 cut(s)	922
Zsp2I	ATGCAT	1 cut(s)	716

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.