MD05G1342700.v1.1

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
46304166 .. 46304772
607 bp
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UTR
Exon/CDS
Intron
MD05G1342700.v1.1.491

Sequence Viewer

Length: 219 bp
ATGGCAGAGATGAAGACTGTGGTCAGATGTTTGCTTGATCTACCCATGGAGATGAAGATACAGAACAAAGATGTCATTGCTGGTAGTGGCTACGTGGCAGCCTCTATGAGGCTTTGGGTCTTCATGACTTGGGAGTTGGGATCATCTCAGGCTGTGCATAGCTTTTGCTCTCGGCTGGATGCCTCTTCCCACCAGAGGACTTTTAGAGAGCTGAGCTAA

Protein Analysis

73

Amino Acids

8.18

Weight (kDa)

7.84

Isoelectric Point (pI)

27.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 148
AfiI CCNNNNNNNGG 2 cut(s) 108, 195
AluBI AGCT 3 cut(s) 162, 211, 216
AluI AGCT 3 cut(s) 162, 211, 216
AlwI GGATC 1 cut(s) 148
ApeKI GCWGC 1 cut(s) 98
BbsI GAAGAC 2 cut(s) 20, 112
BbvI GCAGC 1 cut(s) 110
BisI GCNGC 1 cut(s) 99
BlpI GCTNAGC 1 cut(s) 212
BlsI GCNGC 1 cut(s) 100
BmsI GCATC 1 cut(s) 169
BoxI GACNNNNGTC 1 cut(s) 20
BpiI GAAGAC 2 cut(s) 20, 112
Bpu1102I GCTNAGC 1 cut(s) 212
BsaAI YACGTR 1 cut(s) 94
BsaJI CCNNGG 1 cut(s) 45
Bsc4I CCNNNNNNNGG 2 cut(s) 108, 195
Bse3DI GCAATG 1 cut(s) 75
BseDI CCNNGG 1 cut(s) 45
BseGI GGATG 1 cut(s) 184
BseLI CCNNNNNNNGG 2 cut(s) 108, 195
BseMI GCAATG 1 cut(s) 75
BseMII CTCAG 2 cut(s) 161, 203
BseXI GCAGC 1 cut(s) 110
BslI CCNNNNNNNGG 2 cut(s) 108, 195
Bsp143I GATC 2 cut(s) 37, 140
Bsp1720I GCTNAGC 1 cut(s) 212
Bsp19I CCATGG 1 cut(s) 45
BspCNI CTCAG 2 cut(s) 160, 204
BspHI TCATGA 1 cut(s) 123
BspPI GGATC 1 cut(s) 148
BsrDI GCAATG 1 cut(s) 75
BssECI CCNNGG 1 cut(s) 45
BssMI GATC 2 cut(s) 37, 140
BssT1I CCWWGG 1 cut(s) 45
Bst4CI ACNGT 1 cut(s) 19
Bst6I CTCTTC 1 cut(s) 190
BstBAI YACGTR 1 cut(s) 94
BstDEI CTNAG 2 cut(s) 147, 212
BstDSI CCRYGG 1 cut(s) 45
BstENI CCTNNNNNAGG 1 cut(s) 106
BstF5I GGATG 1 cut(s) 184
BstKTI GATC 2 cut(s) 40, 143
BstMBI GATC 2 cut(s) 37, 140
BstPAI GACNNNNGTC 1 cut(s) 20
BstV1I GCAGC 1 cut(s) 110
BstV2I GAAGAC 2 cut(s) 20, 112
BtgI CCRYGG 1 cut(s) 45
BtsCI GGATG 1 cut(s) 184
CciI TCATGA 1 cut(s) 123
CviAII CATG 2 cut(s) 46, 124
CviJI RGCY 8 cut(s) 90, 101, 112, 152, 162, 175, 211, 216
CviKI_1 RGCY 8 cut(s) 90, 101, 112, 152, 162, 175, 211, 216
DdeI CTNAG 2 cut(s) 147, 212
DpnI GATC 2 cut(s) 39, 142
DpnII GATC 2 cut(s) 37, 140
Eam1104I CTCTTC 1 cut(s) 190
EarI CTCTTC 1 cut(s) 190
Eco130I CCWWGG 1 cut(s) 45
EcoNI CCTNNNNNAGG 1 cut(s) 106
EcoT14I CCWWGG 1 cut(s) 45
ErhI CCWWGG 1 cut(s) 45
FaeI CATG 2 cut(s) 49, 127
FaiI YATR 4 cut(s) 47, 107, 125, 159
FatI CATG 2 cut(s) 45, 123
Fnu4HI GCNGC 1 cut(s) 99
FokI GGATG 1 cut(s) 191
Fsp4HI GCNGC 1 cut(s) 99
GluI GCNGC 1 cut(s) 99
Hin1II CATG 2 cut(s) 49, 127
Hpy188I TCNGA 1 cut(s) 26
Hpy188III TCNNGA 1 cut(s) 124
HpyCH4III ACNGT 1 cut(s) 19
HpyCH4IV ACGT 1 cut(s) 93
HpyCH4V TGCA 1 cut(s) 157
HpyF3I CTNAG 2 cut(s) 147, 212
HpySE526I ACGT 1 cut(s) 93
Hsp92II CATG 2 cut(s) 49, 127
Kzo9I GATC 2 cut(s) 37, 140
LpnPI CCDG 4 cut(s) 66, 134, 161, 206
Lsp1109I GCAGC 1 cut(s) 110
LweI GCATC 1 cut(s) 169
MaeII ACGT 1 cut(s) 93
MalI GATC 2 cut(s) 39, 142
MboI GATC 2 cut(s) 37, 140
MboII GAAGA 4 cut(s) 25, 67, 112, 177
MnlI CCTC 4 cut(s) 102, 112, 189, 193
MslI CAYNNNNRTG 1 cut(s) 50
NcoI CCATGG 1 cut(s) 45
NdeII GATC 2 cut(s) 37, 140
NlaIII CATG 2 cut(s) 49, 127
NmeAIII GCCGAG 1 cut(s) 151
PagI TCATGA 1 cut(s) 123
PkrI GCNGC 1 cut(s) 100
Ppu21I YACGTR 1 cut(s) 94
PshAI GACNNNNGTC 1 cut(s) 20
RseI CAYNNNNRTG 1 cut(s) 50
SatI GCNGC 1 cut(s) 99
Sau3AI GATC 2 cut(s) 37, 140
SetI ASST 4 cut(s) 96, 164, 213, 218
SfaNI GCATC 1 cut(s) 169
SmiMI CAYNNNNRTG 1 cut(s) 50
StyI CCWWGG 1 cut(s) 45
TaaI ACNGT 1 cut(s) 19
TaiI ACGT 1 cut(s) 96
TseI GCWGC 1 cut(s) 98
TspDTI ATGAA 3 cut(s) 26, 68, 112
XagI CCTNNNNNAGG 1 cut(s) 106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.