Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001370

Physical Location & Seq

Genomic Coordinates Reverse (-)

4835724 .. 4837771

Gene Structure 2048 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G14130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 927 bp

ATGGGGGAACTAAACGGAGTCATCATTCCGACTATAGACTTGGAAGAGGTTTCTGATAAGATTCTGAATCAGAAAATCCGTGAAGCCAGTGAGAGATGGGGATGTTTCAGGGTGATAAACCATGGAGTTTCATTGTCTTTGATGGCTGAGATGAAGAAGACTGTTATTGATCTCTTTCAACGTCCATACGAGGTGAAAGTGCGTAACACCGATGTGCTCCTAGGGAGTGGTTACAGAGCTCCAAACGAAATCAATCCTTACTATGAAGCATTAGGTCTCTATGACATGGCTTCTCCTCATGCTGTCAATACCTTTTGTGACCAACTCGAAGCTTCTGCAGATCAAAGGGAGATTATGGTGAAGTATGCGAAGGCTATCAATGGACTTGCAACGGATTTAGCGAGGAAATTAGCAGAGAGTTACGGGCTGGTTGAGACCGACTTTTTCAAAGAATGGCCGAGCCAGTTTCGGATTAACAAATATCATTTTAAACCCGAAACAGTCGGGAAACTCGGTGTGCAACTACACACGGATTCAGGGTTCTTGACGATTCTTCAAGATGATGAAAATGTTGGTGGACTTGAAGCTATGGACAATTCTTCAGGAACCTTTTTCCCCATAGACCCGTTGCCAAACACGCTTGCTATCAACCTCGGGGACATGGCTACGATATGGAGCAACGGAAGATTGTGCAATGTGAAGCATAGAGTGCAATGCAAAGAAGCAACAATGAGGTATTCCATCGCCTCGTTCTTATTAGGACCAATGGATACAGATTTGGAACCTCCAAGTGAGTTTGTGGATGCAGAACATCCGCGACTATACAAGCCTATTAGTCACGAAGGGGTACGAAATATTAGAATGACTAAAAAATTGCATGATGGAGAAGCTCTCAAGCTTATAACCCATGCAGGACTAGATAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009056 GO:0009058 GO:0009314 GO:0009416 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009850 GO:0009852 GO:0009987 GO:0010033 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016491 GO:0016705 GO:0016706 GO:0016707 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0042447 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0046394 GO:0050789 GO:0050794 GO:0050896 GO:0051213 GO:0051716 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

308

Amino Acids

34.63

Weight (kDa)

5.53

Isoelectric Point (pI)

20.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DIOX_N	PF14226	9 - 69	1.5e-12	non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy	PF03171	154 - 252	3e-23	2OG-Fe(II) oxygenase superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001370)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14120 AT1G14120 AT1G14120 AT1G14130
fragaria_vesca	FvH4_1g09830 FvH4_4g14690 FvH4_5g26050
malus_domestica	MD02G1106500.v1.1 MD02G1107000.v1.1 MD05G1342700.v1.1 MD10G1316500.v1.1 MD15G1226200.v1.1 MD15G1226300.v1.1
prunus_persica	Prupe.7G188800_v2.0.a1
pyrus_communis	pycom02g08450 pycom02g08500 pycom02g08590 pycom10g26850 pycom10g26880 pycom15g20120
rosa_chinensis	RchiOBHm_Chr2g0096111 RchiOBHm_Chr2g0096611 RchiOBHm_Chr6g0310881
rosa_laevigata	RLG00000010454 RLG00000012686 RLG00000016626 RLG00000016655
rosa_multiflora	Rmu_co8407901.1_g000001 Rmu_sc0003565.1_g000008 Rmu_sc0005996.1_g000007 Rmu_ssc0000395.1_g000003
rosa_roxburghii	Rroxscaffold_2G00145480 Rroxscaffold_2G00145740 Rroxscaffold_7G00158220
rosa_rugosa	Rorug02G0057300 Rorug02G0058900 Rorug06G0169900 Rorug06G0383800
rosa_samantha	Rh2AG104100 Rh2AG106300 Rh2BG106200 Rh2BG108700 Rh2CG108100 Rh2CG110400 Rh2DG106800 Rh2DG110000 Rh6AG497500 Rh6BG507600 Rh6CG513600 Rh6DG500200
rosa_wichuraiana	Rw2G008000 Rw2G008230 Rw6G043330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	902
AccII	CGCG	1 cut(s)	817
AciI	CCGC	1 cut(s)	815
AcoI	YGGCCR	1 cut(s)	455
AcuI	CTGAAG	1 cut(s)	585
AfaI	GTAC	1 cut(s)	849
AgsI	TTSAA	4 cut(s)	179, 448, 557, 584
AleI	CACNNNNGTG	1 cut(s)	212
AloI	GAACNNNNNNTCC	2 cut(s)	524, 556
AluBI	AGCT	5 cut(s)	239, 332, 587, 890, 898
AluI	AGCT	5 cut(s)	239, 332, 587, 890, 898
Alw21I	GWGCWC	2 cut(s)	219, 241
Alw26I	GTCTC	2 cut(s)	281, 428
Ama87I	CYCGRG	1 cut(s)	653
AoxI	GGCC	1 cut(s)	455
AspA2I	CCTAGG	1 cut(s)	220
AspS9I	GGNCC	1 cut(s)	761
AsuHPI	GGTGA	3 cut(s)	124, 205, 370
AvaI	CYCGRG	1 cut(s)	653
AvaII	GGWCC	1 cut(s)	761
AvrII	CCTAGG	1 cut(s)	220
BanII	GRGCYC	1 cut(s)	241
BbsI	GAAGAC	1 cut(s)	164
Bbv12I	GWGCWC	2 cut(s)	219, 241
BccI	CCATC	4 cut(s)	90, 136, 749, 875
BcgI	CGANNNNNNTGC	2 cut(s)	317, 351
BciVI	GTATCC	1 cut(s)	763
BcoDI	GTCTC	2 cut(s)	281, 428
BfaI	CTAG	2 cut(s)	221, 917
BfmI	CTRYAG	2 cut(s)	33, 336
BfuI	GTATCC	1 cut(s)	763
BlnI	CCTAGG	1 cut(s)	220
Bme18I	GGWCC	1 cut(s)	761
BmeT110I	CYCGRG	1 cut(s)	653
BmgT120I	GGNCC	1 cut(s)	761
BmiI	GGNNCC	2 cut(s)	607, 783
BmsI	GCATC	1 cut(s)	793
BpiI	GAAGAC	1 cut(s)	164
BplI	GAGNNNNNCTC	2 cut(s)	876, 908
BpuEI	CTTGAG	1 cut(s)	878
BsaI	GGTCTC	2 cut(s)	281, 428
BsaJI	CCNNGG	3 cut(s)	121, 220, 652
Bse1I	ACTGG	2 cut(s)	87, 463
Bse3DI	GCAATG	2 cut(s)	700, 719
BseDI	CCNNGG	3 cut(s)	121, 220, 652
BseGI	GGATG	3 cut(s)	107, 808, 811
BseMI	GCAATG	2 cut(s)	700, 719
BseMII	CTCAG	1 cut(s)	138
BseNI	ACTGG	2 cut(s)	87, 463
BseRI	GAGGAG	1 cut(s)	285
Bsh1236I	CGCG	1 cut(s)	817
BshFI	GGCC	1 cut(s)	457
BsiHKAI	GWGCWC	2 cut(s)	219, 241
BsiHKCI	CYCGRG	1 cut(s)	653
BslFI	GGGAC	1 cut(s)	671
BsmAI	GTCTC	2 cut(s)	281, 428
BsmFI	GGGAC	1 cut(s)	671
BsnI	GGCC	1 cut(s)	457
Bso31I	GGTCTC	2 cut(s)	281, 428
BsoBI	CYCGRG	1 cut(s)	653
Bsp1286I	GDGCHC	2 cut(s)	219, 241
Bsp143I	GATC	2 cut(s)	169, 340
Bsp19I	CCATGG	1 cut(s)	121
BspACI	CCGC	1 cut(s)	815
BspANI	GGCC	1 cut(s)	457
BspCNI	CTCAG	1 cut(s)	139
BspFNI	CGCG	1 cut(s)	817
BspLI	GGNNCC	2 cut(s)	607, 783
BspMAI	CTGCAG	1 cut(s)	340
BspTNI	GGTCTC	2 cut(s)	281, 428
BsrDI	GCAATG	2 cut(s)	700, 719
BsrI	ACTGG	2 cut(s)	87, 463
BssECI	CCNNGG	3 cut(s)	121, 220, 652
BssMI	GATC	2 cut(s)	169, 340
BssT1I	CCWWGG	2 cut(s)	121, 220
Bst4CI	ACNGT	2 cut(s)	163, 502
Bst6I	CTCTTC	1 cut(s)	39
BstAPI	GCANNNNNTGC	1 cut(s)	709
BstC8I	GCNNGC	1 cut(s)	642
BstDEI	CTNAG	1 cut(s)	147
BstDSI	CCRYGG	1 cut(s)	121
BstF5I	GGATG	3 cut(s)	107, 808, 811
BstFNI	CGCG	1 cut(s)	817
BstKTI	GATC	2 cut(s)	172, 343
BstMAI	GTCTC	2 cut(s)	281, 428
BstMBI	GATC	2 cut(s)	169, 340
BstMWI	GCNNNNNNNGC	2 cut(s)	637, 709
BstSFI	CTRYAG	2 cut(s)	33, 336
BstUI	CGCG	1 cut(s)	817
BstV2I	GAAGAC	1 cut(s)	164
BsuI	GTATCC	1 cut(s)	763
BsuRI	GGCC	1 cut(s)	457
BtgI	CCRYGG	1 cut(s)	121
BtgZI	GCGATG	1 cut(s)	727
BtsCI	GGATG	3 cut(s)	107, 808, 811
BtsIMutI	CAGTG	1 cut(s)	94
Cac8I	GCNNGC	1 cut(s)	642
Cfr13I	GGNCC	1 cut(s)	761
Csp6I	GTAC	1 cut(s)	848
CviAII	CATG	6 cut(s)	122, 286, 299, 661, 878, 908
CviQI	GTAC	1 cut(s)	848
DdeI	CTNAG	1 cut(s)	147
DpnI	GATC	2 cut(s)	171, 342
DpnII	GATC	2 cut(s)	169, 340
DraI	TTTAAA	1 cut(s)	490
EaeI	YGGCCR	1 cut(s)	455
Eam1104I	CTCTTC	1 cut(s)	39
EarI	CTCTTC	1 cut(s)	39
Ecl136II	GAGCTC	1 cut(s)	239
Eco130I	CCWWGG	2 cut(s)	121, 220
Eco24I	GRGCYC	1 cut(s)	241
Eco31I	GGTCTC	2 cut(s)	281, 428
Eco47I	GGWCC	1 cut(s)	761
Eco53kI	GAGCTC	1 cut(s)	239
Eco57I	CTGAAG	1 cut(s)	585
Eco88I	CYCGRG	1 cut(s)	653
EcoICRI	GAGCTC	1 cut(s)	239
EcoT14I	CCWWGG	2 cut(s)	121, 220
EcoT38I	GRGCYC	1 cut(s)	241
ErhI	CCWWGG	2 cut(s)	121, 220
FaeI	CATG	6 cut(s)	125, 289, 302, 664, 881, 911
FaqI	GGGAC	1 cut(s)	671
FatI	CATG	6 cut(s)	121, 285, 298, 660, 877, 907
FokI	GGATG	3 cut(s)	114, 798, 815
FriOI	GRGCYC	1 cut(s)	241
FspBI	CTAG	2 cut(s)	221, 917
HaeIII	GGCC	1 cut(s)	457
Hin1II	CATG	6 cut(s)	125, 289, 302, 664, 881, 911
HindIII	AAGCTT	2 cut(s)	330, 896
HinfI	GANTC	5 cut(s)	18, 61, 67, 533, 550
HphI	GGTGA	3 cut(s)	124, 205, 370
Hpy166II	GTNNAC	1 cut(s)	578
Hpy188I	TCNGA	5 cut(s)	30, 55, 66, 72, 471
Hpy188III	TCNNGA	5 cut(s)	505, 544, 557, 603, 839
Hpy8I	GTNNAC	1 cut(s)	578
HpyAV	CCTTC	2 cut(s)	364, 836
HpyCH4III	ACNGT	2 cut(s)	163, 502
HpyCH4IV	ACGT	1 cut(s)	181
HpyCH4V	TGCA	9 cut(s)	338, 389, 520, 693, 712, 717, 806, 877, 911
HpyF10VI	GCNNNNNNNGC	2 cut(s)	637, 709
HpyF3I	CTNAG	1 cut(s)	147
HpySE526I	ACGT	1 cut(s)	181
Hsp92II	CATG	6 cut(s)	125, 289, 302, 664, 881, 911
Kzo9I	GATC	2 cut(s)	169, 340
LmnI	GCTCC	3 cut(s)	222, 244, 675
LpnPI	CCDG	7 cut(s)	94, 100, 413, 476, 522, 588, 897
LweI	GCATC	1 cut(s)	793
MaeI	CTAG	2 cut(s)	221, 917
MaeII	ACGT	1 cut(s)	181
MaeIII	GTNAC	5 cut(s)	203, 230, 317, 419, 836
MalI	GATC	2 cut(s)	171, 342
MboI	GATC	2 cut(s)	169, 340
MboII	GAAGA	6 cut(s)	56, 166, 169, 545, 591, 696
MhlI	GDGCHC	2 cut(s)	219, 241
MluCI	AATT	3 cut(s)	407, 595, 872
MlyI	GAGTC	1 cut(s)	27
MmeI	TCCRAC	1 cut(s)	53
MnlI	CCTC	8 cut(s)	40, 184, 306, 396, 662, 726, 757, 795
MseI	TTAA	2 cut(s)	474, 489
MslI	CAYNNNNRTG	1 cut(s)	212
MvnI	CGCG	1 cut(s)	817
MwoI	GCNNNNNNNGC	2 cut(s)	637, 709
NcoI	CCATGG	1 cut(s)	121
NdeII	GATC	2 cut(s)	169, 340
NlaIII	CATG	6 cut(s)	125, 289, 302, 664, 881, 911
NlaIV	GGNNCC	2 cut(s)	607, 783
NmeAIII	GCCGAG	1 cut(s)	483
NmuCI	GTSAC	2 cut(s)	317, 836
OliI	CACNNNNGTG	1 cut(s)	212
PcsI	WCGNNNNNNNCGW	1 cut(s)	398
PfeI	GAWTC	4 cut(s)	61, 67, 533, 550
PleI	GAGTC	1 cut(s)	26
PpsI	GAGTC	1 cut(s)	26
PsiI	TTATAA	1 cut(s)	902
Psp124BI	GAGCTC	1 cut(s)	241
PspN4I	GGNNCC	2 cut(s)	607, 783
PspPI	GGNCC	1 cut(s)	761
PstI	CTGCAG	1 cut(s)	340
RsaI	GTAC	1 cut(s)	849
RsaNI	GTAC	1 cut(s)	848
RseI	CAYNNNNRTG	1 cut(s)	212
SacI	GAGCTC	1 cut(s)	241
SaqAI	TTAA	2 cut(s)	474, 489
Sau3AI	GATC	2 cut(s)	169, 340
Sau96I	GGNCC	1 cut(s)	761
SchI	GAGTC	1 cut(s)	27
SduI	GDGCHC	2 cut(s)	219, 241
SfaNI	GCATC	1 cut(s)	793
SfcI	CTRYAG	2 cut(s)	33, 336
SinI	GGWCC	1 cut(s)	761
SmiMI	CAYNNNNRTG	1 cut(s)	212
SmlI	CTYRAG	1 cut(s)	893
SmoI	CTYRAG	1 cut(s)	893
Sse9I	AATT	3 cut(s)	407, 595, 872
SsiI	CCGC	1 cut(s)	815
SspI	AATATT	1 cut(s)	856
SspMI	CTAG	2 cut(s)	221, 917
SstI	GAGCTC	1 cut(s)	241
StyI	CCWWGG	2 cut(s)	121, 220
TaaI	ACNGT	2 cut(s)	163, 502
TaiI	ACGT	1 cut(s)	184
TaqI	TCGA	1 cut(s)	327
TaqII	GACCGA	1 cut(s)	452
TasI	AATT	3 cut(s)	407, 595, 872
TfiI	GAWTC	4 cut(s)	61, 67, 533, 550
Tru1I	TTAA	2 cut(s)	474, 489
Tru9I	TTAA	2 cut(s)	474, 489
TscAI	CASTG	1 cut(s)	94
TseFI	GTSAC	2 cut(s)	317, 836
Tsp45I	GTSAC	2 cut(s)	317, 836
TspDTI	ATGAA	4 cut(s)	120, 167, 279, 579
TspGWI	ACGGA	5 cut(s)	30, 68, 407, 545, 696
TspRI	CASTG	1 cut(s)	94
VpaK11BI	GGWCC	1 cut(s)	761
XmaJI	CCTAGG	1 cut(s)	220
XspI	CTAG	2 cut(s)	221, 917

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.