AT1G28010

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0001951
Physical Location & Seq
Forward (+)
9763211 .. 9768113
4903 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G28010.1

Sequence Viewer

Length: 3744 bp
ATGGATAACATAGAACCACCCTTTAGTGGAAACATCCATGCTGAGACCGAAGTAAAGAAGGAGGAGAAGAAAAAGATGAAGAAGGAATCGGTGTCATTGATGGGTTTGTTTAGTGCAGCTGATAATGTTGATTACTTTCTGATGTTTCTTGGGGGTTTAGGCACGTGTATTCATGGCGGTACGCTTCCGCTCTTCTTCGTGTTCTTCGGGGGAATGCTAGATTCTCTTGGGAAGCTTTCTACAGACCCGAATGCCATATCTTCTCGCGTTTCACAGAATGCTCTGTACTTGGTCTACTTAGGATTGGTCAATTTGGTATCAGCCTGGATTGGAGTTGCTTGTTGGATGCAAACAGGGGAAAGACAAACAGCGCGATTGCGTATAAATTATCTCAAATCAATCTTAGCAAAAGATATTACTTTCTTTGATACTGAAGCTAGAGATTCAAACTTCATTTTCCACATCTCAAGCGACGCAATCTTGGTTCAAGATGCCATTGGCGATAAGACCGGCCATGTTTTGCGGTACCTATGTCAGTTCATCGCGGGATTTGTCATCGGTTTTTTGTCAGTATGGCAACTAACGTTGCTTACGTTAGGAGTGGTTCCACTGATAGCAATTGCAGGAGGAGGGTATGCTATAGTCATGTCTACAATATCAGAGAAGAGTGAGGCTGCTTATGCTGATGCAGGAAAAGTTGCAGAAGAGGTCATGTCACAGGTGAGAACAGTGTATGCATTTGTAGGAGAAGAGAAAGCTGTAAAATCTTACTCAAATTCTCTCAAGAAAGCTCTGAAACTCAGTAAAAGAAGTGGTCTTGCTAAAGGTTTAGGAGTTGGATTAACATATAGCCTCTTGTTCTGTGCTTGGGCATTGCTTTTTTGGTATGCAAGTCTTCTTGTACGCCATGGCAAAACCAACGGCGCAAAAGCCTTCACAACAATCCTCAATGTCATTTACAGCGGATTCGCCTTAGGTCAAGCCGTGCCTAGCTTATCCGCAATTTCTAAAGGCAGAGTTGCTGCTGCAAATATTTTCAAAATGATAGGAAACAACAATCTTGAAAGCTCTGAGAGATTAGAAAACGGAACAACATTGCAAAACGTAGTTGGCAAGATTGAGTTTTGTGGAGTTTCGTTCGCATATCCTTCGAGACCAAACATGGTTTTTGAGAATCTTAGTTTCACGATACATTCAGGCAAGACTTTTGCATTTGTCGGTCCAAGTGGTTCGGGGAAAAGCACAATCATATCAATGGTGCAACGTTTCTATGAACCTAGATCAGGGGAGATTCTCTTGGATGGAAATGACATCAAGAACCTGAAGCTGAAATGGTTGAGAGAACAGATGGGATTAGTGAGTCAAGAACCAGCATTATTCGCCACAACAATAGCTTCTAATATTCTTCTCGGTAAAGAGAAAGCCAATATGGATCAGATCATAGAAGCTGCTAAAGCAGCCAACGCAGATTCTTTCATTAAATCATTACCTAATGGTTACAATACTCAGGTTGGAGAAGGAGGAACTCAACTTTCAGGAGGGCAGAAACAGAGGATTGCTATTGCTCGGGCGGTTCTAAGAAATCCAAAGATATTACTTTTAGATGAAGCAACAAGCGCTCTTGATGCCGAATCAGAGAAGATTGTTCAGCAAGCACTTGACAATGTCATGGAAAAAAGAACAACAATCGTCATTGCACATAGATTATCCACCATTCGAAATGTTGACAAGATTGTTGTCTTGAGAGATGGTCAAGTTAGGGAAACCGGAAGTCACTCAGAACTGATATCAAGAGGAGGAGATTATGCCACTCTTGTAAATTGTCAAGACACAGAACCTCAAGAAAACTTGAGATCAGTCATGTATGAATCTTGTAGGTCTCAAGCTGGATCATATAGTTCAAGAAGAGTTTTTAGCTCAAGAAGGACTTCAAGCTTCAGGGAAGACCAAGAGAAGACTGAAAAAGATTCAAAAGGCGAAGATTTAATAAGCTCGTCCTCAATGATATGGGAACTAATAAAGTTGAATGCTCCAGAATGGCTTTATGCATTACTTGGCTCAATTGGTGCCGTTCTTGCCGGATCACAACCGGCATTGTTCTCCATGGGGCTTGCTTACGTGTTAACCACGTTTTATTCACCTTTTCCTAGTCTGATCAAGCGTGAAGTCGATAAGGTAGCTATTATCTTTGTTGGAGCTGGAATAGTAACAGCGCCTATATACATTCTCCAACATTACTTCTATACACTAATGGGAGAGCGTCTTACTTCTCGGGTTCGCTTATCCTTGTTCTCAGCGATTCTTTCAAATGAGATTGGATGGTTTGATCTGGATGAGAACAACACTGGCTCACTCACTTCAATCTTAGCTGCTGATGCAACCTTGGTGAGGAGTGCTATAGCGGATCGTCTATCGACAATAGTCCAAAACTTGTCTCTTACAATCACAGCCTTAGCACTTGCCTTTTTCTACAGTTGGCGTGTTGCAGCTGTCGTAACAGCTTGTTTTCCTCTTCTCATTGCCGCTTCACTTACCGAGCAATTATTTCTAAAAGGCTTTGGAGGAGATTACACAAGGGCTTACTCTAGGGCAACTTCATTGGCGCGTGAAGCGATTTCGAATATAAGAACCGTCGCTGCATTTAGTGCTGAAAAGCAAATCTCAGAACAGTTTACTTGTGAACTAAGCAAACCCACCAAGAGTGCCTTACTCAGAGGTCATATCTCGGGATTTGGATACGGTTTGTCACAGTGTCTCGCGTTCTGTTCCTACGCACTTGGTCTCTGGTATATCTCAGTTCTGATTAAGCGCAACGAGACCAACTTTGAGGATAGTATCAAATCTTTCATGGTATTGCTCGTCACTGCTTACTCCGTAGCGGAAACGCTTGCGTTAACCCCAGATATCGTGAAGGGCACACAAGCACTCGGGTCCGTATTTAGGGTTTTACATAGAGAGACTGAAATACCTCCAGACCAGCCTAACTCAAGATTGGTCACTCATATCAAAGGAGATATAGAGTTTAGAAACGTGAGCTTTGCGTATCCCACTAGACCCGAAATCGCCATTTTCAAAAATCTAAATCTCCGAGTTTCAGCCGGGAAGAGTCTTGCGGTCGTGGGACCTAGTGGTTCGGGAAAGAGCACAGTGATCGGACTAATCATGAGATTCTACGATCCGAGCAACGGAAATCTCTGTATCGATGGGCATGATATAAAATCTGTAAACCTACGTAGCTTGCGCAAGAAGCTAGCGTTAGTTCAGCAAGAACCGGCTCTGTTTTCAACATCCATACACGAGAACATCAAGTATGGGAACGAGAACGCGTCAGAGGCAGAGATCATTGAAGCCGCAAAAGCCGCGAACGCGCACGAGTTCATAAGCAGGATGGAAGAAGGGTACATGACTCACGTGGGTGATAAGGGAGTGCAGTTATCAGGTGGGCAAAAACAGAGAGTGGCTATCGCACGGGCAGTTCTAAAAGATCCTTCAGTGCTTCTCCTTGATGAGGCAACAAGTGCTTTGGATACGAGCGCAGAGAAACAGGTCCAAGAGGCGCTAGACAAGTTGATGAAGGGACGAACCACGATTCTGGTGGCTCACAGGCTCTCGACCATAAGAAAAGCAGACACAATCGTTGTATTGCATAAAGGAAAAGTTGTGGAGAAAGGAAGTCACAGAGAACTTGTATCTAAATCCGATGGGTTTTATAAGAAATTGACGAGTCTTCAAGAAGCGGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1247

Amino Acids

136.17

Weight (kDa)

8.96

Isoelectric Point (pI)

38.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 48 - 319 7.6e-50 ABC transporter transmembrane region
ABC_tran PF00005 391 - 539 4.4e-35 ABC transporter
SMC_N PF02463 426 - 581 2.4e-06 RecF/RecN/SMC N terminal domain
ABC_membrane PF00664 685 - 956 1.7e-47 ABC transporter transmembrane region
ABC_tran PF00005 1024 - 1173 3.1e-33 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3711
Acc16I TGCGCA 1 cut(s) 3242
Acc65I GGTACC 1 cut(s) 525
AccB1I GGYRCC 2 cut(s) 525, 2066
AccBSI CCGCTC 1 cut(s) 190
AccI GTMKAC 2 cut(s) 294, 650
AccII CGCG 8 cut(s) 267, 373, 545, 2605, 2759, 3326, 3362, 3368
AclI AACGTT 2 cut(s) 584, 1264
AclWI GGATC 6 cut(s) 1440, 1897, 2089, 2412, 3170, 3479
AcoI YGGCCR 1 cut(s) 511
AcsI RAATTY 1 cut(s) 775
AcuI CTGAAG 4 cut(s) 453, 1343, 1921, 3474
AcvI CACGTG 2 cut(s) 165, 3412
AfaI GTAC 5 cut(s) 181, 287, 527, 903, 3401
AfeI AGCGCT 1 cut(s) 1618
AfiI CCNNNNNNNGG 6 cut(s) 26, 1283, 2388, 2940, 3185, 3508
AflIII ACRYGT 3 cut(s) 164, 2118, 3324
AjnI CCWGG 1 cut(s) 323
AleI CACNNNNGTG 1 cut(s) 3414
Alw21I GWGCWC 1 cut(s) 3146
Alw26I GTCTC 8 cut(s) 38, 1147, 1884, 2439, 2759, 2786, 2810, 2951
AlwI GGATC 6 cut(s) 1440, 1897, 2089, 2412, 3170, 3479
Ama87I CYCGRG 4 cut(s) 1566, 2271, 2725, 2927
Aor51HI AGCGCT 1 cut(s) 1618
AoxI GGCC 1 cut(s) 511
ApeKI GCWGC 9 cut(s) 116, 674, 1022, 1025, 1448, 1457, 2369, 2486, 2636
ApoI RAATTY 1 cut(s) 775
Asp700I GAANNNNTTC 1 cut(s) 1927
Asp718I GGTACC 1 cut(s) 525
AspS9I GGNCC 4 cut(s) 1220, 2931, 3122, 3547
AsuC2I CCSGG 1 cut(s) 3100
AsuHPI GGTGA 4 cut(s) 733, 2130, 2398, 3428
AsuII TTCGAA 2 cut(s) 1717, 2618
AsuNHI GCTAGC 1 cut(s) 3250
AvaI CYCGRG 4 cut(s) 1566, 2271, 2725, 2927
AvaII GGWCC 4 cut(s) 1220, 2931, 3122, 3547
AxyI CCTNAGG 1 cut(s) 973
BaeGI GKGCMC 1 cut(s) 2918
BaeI ACNNNNGTAYC 2 cut(s) 517, 550
BanI GGYRCC 2 cut(s) 525, 2066
BauI CACGAG 2 cut(s) 3296, 3371
BbrPI CACGTG 2 cut(s) 165, 3412
BbsI GAAGAC 4 cut(s) 887, 1950, 1961, 3719
Bbv12I GWGCWC 1 cut(s) 3146
BbvI GCAGC 9 cut(s) 128, 661, 1009, 1012, 1435, 1469, 2356, 2498, 2623
BccI CCATC 8 cut(s) 94, 1295, 1342, 1742, 2313, 3197, 3382, 3695
BceAI ACGGC 3 cut(s) 937, 968, 2054
BcgI CGANNNNNNTGC 4 cut(s) 1131, 1165, 3133, 3167
BciT130I CCWGG 1 cut(s) 325
BciVI GTATCC 3 cut(s) 2729, 3054, 3520
BclI TGATCA 1 cut(s) 2154
BcnI CCSGG 1 cut(s) 3100
BcoDI GTCTC 8 cut(s) 38, 1147, 1884, 2439, 2759, 2786, 2810, 2951
BfmI CTRYAG 4 cut(s) 240, 639, 2397, 2470
BfoI RGCGCY 3 cut(s) 1620, 2216, 3560
BfuI GTATCC 3 cut(s) 2729, 3054, 3520
Bme1390I CCNGG 2 cut(s) 325, 3100
Bme18I GGWCC 4 cut(s) 1220, 2931, 3122, 3547
BmeT110I CYCGRG 4 cut(s) 1566, 2271, 2725, 2927
BmgT120I GGNCC 4 cut(s) 1220, 2931, 3122, 3547
BmiI GGNNCC 5 cut(s) 527, 606, 2068, 2932, 3123
BmrFI CCNGG 2 cut(s) 325, 3100
BmsI GCATC 5 cut(s) 336, 481, 676, 1615, 2365
BmtI GCTAGC 1 cut(s) 3254
BoxI GACNNNNGTC 1 cut(s) 2420
BpiI GAAGAC 4 cut(s) 887, 1950, 1961, 3719
BpmI CTGGAG 2 cut(s) 2016, 2955
Bpu10I CCTNAGC 1 cut(s) 2452
Bpu14I TTCGAA 2 cut(s) 1717, 2618
BpuEI CTTGAG 8 cut(s) 451, 767, 1762, 1824, 1866, 1870, 1903, 2971
BpuMI CCSGG 1 cut(s) 3100
Bsa29I ATCGAT 1 cut(s) 3201
BsaAI YACGTR 4 cut(s) 165, 2119, 3233, 3412
BsaI GGTCTC 5 cut(s) 38, 1147, 1884, 2786, 2810
BsaJI CCNNGG 3 cut(s) 907, 2103, 2382
BsaWI WCCGGW 1 cut(s) 1766
Bsc4I CCNNNNNNNGG 6 cut(s) 26, 1283, 2388, 2940, 3185, 3508
Bse118I RCCGGY 3 cut(s) 509, 2089, 3271
Bse1I ACTGG 1 cut(s) 2350
Bse21I CCTNAGG 1 cut(s) 973
Bse3DI GCAATG 4 cut(s) 872, 1094, 1692, 2517
BseBI CCWGG 1 cut(s) 325
BseCI ATCGAT 1 cut(s) 3201
BseDI CCNNGG 3 cut(s) 907, 2103, 2382
BseGI GGATG 7 cut(s) 33, 351, 1306, 2324, 2338, 3287, 3393
BseLI CCNNNNNNNGG 6 cut(s) 26, 1283, 2388, 2940, 3185, 3508
BseMI GCAATG 4 cut(s) 872, 1094, 1692, 2517
BseMII CTCAG 9 cut(s) 33, 814, 1062, 1520, 1791, 2307, 2676, 2725, 2808
BseNI ACTGG 1 cut(s) 2350
BseRI GAGGAG 6 cut(s) 77, 642, 1809, 1812, 2404, 2577
BseSI GKGCMC 1 cut(s) 2918
BseXI GCAGC 9 cut(s) 128, 661, 1009, 1012, 1435, 1469, 2356, 2498, 2623
BsgI GTGCAG 2 cut(s) 135, 3449
Bsh1236I CGCG 8 cut(s) 267, 373, 545, 2605, 2759, 3326, 3362, 3368
Bsh1285I CGRYCG 1 cut(s) 3117
BshFI GGCC 1 cut(s) 513
BshNI GGYRCC 2 cut(s) 525, 2066
BshVI ATCGAT 1 cut(s) 3201
BsiEI CGRYCG 1 cut(s) 3117
BsiHKAI GWGCWC 1 cut(s) 3146
BsiHKCI CYCGRG 4 cut(s) 1566, 2271, 2725, 2927
BsiSI CCGG 6 cut(s) 510, 1767, 2079, 2090, 3099, 3272
BslFI GGGAC 2 cut(s) 3135, 3591
BslI CCNNNNNNNGG 6 cut(s) 26, 1283, 2388, 2940, 3185, 3508
BsmAI GTCTC 8 cut(s) 38, 1147, 1884, 2439, 2759, 2786, 2810, 2951
BsmFI GGGAC 2 cut(s) 3135, 3591
BsmI GAATGC 4 cut(s) 219, 256, 283, 2032
BsnI GGCC 1 cut(s) 513
Bso31I GGTCTC 5 cut(s) 38, 1147, 1884, 2786, 2810
BsoBI CYCGRG 4 cut(s) 1566, 2271, 2725, 2927
Bsp119I TTCGAA 2 cut(s) 1717, 2618
Bsp1286I GDGCHC 2 cut(s) 2918, 3146
Bsp19I CCATGG 2 cut(s) 907, 2103
BspANI GGCC 1 cut(s) 513
BspCNI CTCAG 9 cut(s) 34, 813, 1063, 1519, 1790, 2306, 2675, 2724, 2807
BspDI ATCGAT 1 cut(s) 3201
BspFNI CGCG 8 cut(s) 267, 373, 545, 2605, 2759, 3326, 3362, 3368
BspHI TCATGA 1 cut(s) 3162
BspLI GGNNCC 5 cut(s) 527, 606, 2068, 2932, 3123
BspOI GCTAGC 1 cut(s) 3254
BspPI GGATC 6 cut(s) 1440, 1897, 2089, 2412, 3170, 3479
BspQI GCTCTTC 1 cut(s) 197
BspT104I TTCGAA 2 cut(s) 1717, 2618
BspT107I GGYRCC 2 cut(s) 525, 2066
BspTNI GGTCTC 5 cut(s) 38, 1147, 1884, 2786, 2810
BsrBI CCGCTC 1 cut(s) 190
BsrDI GCAATG 4 cut(s) 872, 1094, 1692, 2517
BsrFI RCCGGY 3 cut(s) 509, 2089, 3271
BsrI ACTGG 1 cut(s) 2350
BssAI RCCGGY 3 cut(s) 509, 2089, 3271
BssECI CCNNGG 3 cut(s) 907, 2103, 2382
BssSI CACGAG 2 cut(s) 3296, 3371
BssT1I CCWWGG 3 cut(s) 907, 2103, 2382
Bst2BI CACGAG 2 cut(s) 3296, 3371
Bst2UI CCWGG 1 cut(s) 325
Bst4CI ACNGT 7 cut(s) 730, 2474, 2632, 2670, 2741, 2751, 3148
Bst6I CTCTTC 7 cut(s) 197, 659, 699, 744, 1900, 2517, 3098
BstAPI GCANNNNNTGC 2 cut(s) 2645, 3518
BstBAI YACGTR 4 cut(s) 165, 2119, 3233, 3412
BstBI TTCGAA 2 cut(s) 1717, 2618
BstC8I GCNNGC 5 cut(s) 1653, 2112, 2889, 3239, 3252
BstDSI CCRYGG 2 cut(s) 907, 2103
BstENI CCTNNNNNAGG 3 cut(s) 1281, 2386, 3506
BstF5I GGATG 7 cut(s) 33, 351, 1306, 2324, 2338, 3287, 3393
BstFNI CGCG 8 cut(s) 267, 373, 545, 2605, 2759, 3326, 3362, 3368
BstH2I RGCGCY 3 cut(s) 1620, 2216, 3560
BstMAI GTCTC 8 cut(s) 38, 1147, 1884, 2439, 2759, 2786, 2810, 2951
BstMCI CGRYCG 1 cut(s) 3117
BstNI CCWGG 1 cut(s) 325
BstPAI GACNNNNGTC 1 cut(s) 2420
BstSCI CCNGG 2 cut(s) 323, 3098
BstSFI CTRYAG 4 cut(s) 240, 639, 2397, 2470
BstSLI GKGCMC 1 cut(s) 2918
BstSNI TACGTA 1 cut(s) 3233
BstUI CGCG 8 cut(s) 267, 373, 545, 2605, 2759, 3326, 3362, 3368
BstV1I GCAGC 9 cut(s) 128, 661, 1009, 1012, 1435, 1469, 2356, 2498, 2623
BstV2I GAAGAC 4 cut(s) 887, 1950, 1961, 3719
BstX2I RGATCY 1 cut(s) 3484
BstXI CCANNNNNNTGG 1 cut(s) 3592
BstYI RGATCY 1 cut(s) 3484
Bsu15I ATCGAT 1 cut(s) 3201
Bsu36I CCTNAGG 1 cut(s) 973
BsuI GTATCC 3 cut(s) 2729, 3054, 3520
BsuRI GGCC 1 cut(s) 513
BsuTUI ATCGAT 1 cut(s) 3201
BtgI CCRYGG 2 cut(s) 907, 2103
BtgZI GCGATG 1 cut(s) 526
BtsCI GGATG 7 cut(s) 33, 351, 1306, 2324, 2338, 3287, 3393
BtsI GCAGTG 1 cut(s) 2862
BtsIMutI CAGTG 7 cut(s) 608, 735, 2343, 2756, 2862, 3153, 3498
Cac8I GCNNGC 5 cut(s) 1653, 2112, 2889, 3239, 3252
CciI TCATGA 1 cut(s) 3162
Cfr10I RCCGGY 3 cut(s) 509, 2089, 3271
Cfr13I GGNCC 4 cut(s) 1220, 2931, 3122, 3547
ClaI ATCGAT 1 cut(s) 3201
CseI GACGC 3 cut(s) 482, 2249, 3315
Csp6I GTAC 5 cut(s) 180, 286, 526, 902, 3400
CviQI GTAC 5 cut(s) 180, 286, 526, 902, 3400
EaeI YGGCCR 1 cut(s) 511
Eam1104I CTCTTC 7 cut(s) 197, 659, 699, 744, 1900, 2517, 3098
EarI CTCTTC 7 cut(s) 197, 659, 699, 744, 1900, 2517, 3098
Eco105I TACGTA 1 cut(s) 3233
Eco130I CCWWGG 3 cut(s) 907, 2103, 2382
Eco31I GGTCTC 5 cut(s) 38, 1147, 1884, 2786, 2810
Eco32I GATATC 2 cut(s) 1788, 2905
Eco47I GGWCC 4 cut(s) 1220, 2931, 3122, 3547
Eco47III AGCGCT 1 cut(s) 1618
Eco57I CTGAAG 4 cut(s) 453, 1343, 1921, 3474
Eco72I CACGTG 2 cut(s) 165, 3412
Eco81I CCTNAGG 1 cut(s) 973
Eco88I CYCGRG 4 cut(s) 1566, 2271, 2725, 2927
EcoNI CCTNNNNNAGG 3 cut(s) 1281, 2386, 3506
EcoO109I RGGNCCY 1 cut(s) 3122
EcoRII CCWGG 1 cut(s) 323
EcoRV GATATC 2 cut(s) 1788, 2905
EcoT14I CCWWGG 3 cut(s) 907, 2103, 2382
EcoT22I ATGCAT 2 cut(s) 739, 2050
ErhI CCWWGG 3 cut(s) 907, 2103, 2382
FalI AAGNNNNNCTT 4 cut(s) 1912, 1944, 2690, 2722
FaqI GGGAC 2 cut(s) 3135, 3591
FauI CCCGC 1 cut(s) 538
FbaI TGATCA 1 cut(s) 2154
FblI GTMKAC 2 cut(s) 294, 650
FokI GGATG 7 cut(s) 20, 358, 1313, 2331, 2345, 3274, 3400
FspI TGCGCA 1 cut(s) 3242
GsuI CTGGAG 2 cut(s) 2016, 2955
HaeII RGCGCY 3 cut(s) 1620, 2216, 3560
HaeIII GGCC 1 cut(s) 513
HapII CCGG 6 cut(s) 510, 1767, 2079, 2090, 3099, 3272
HgaI GACGC 3 cut(s) 482, 2249, 3315
HincII GTYRAC 3 cut(s) 1726, 2124, 2895
HindII GTYRAC 3 cut(s) 1726, 2124, 2895
HindIII AAGCTT 2 cut(s) 233, 1933
HpaI GTTAAC 2 cut(s) 2124, 2895
HpaII CCGG 6 cut(s) 510, 1767, 2079, 2090, 3099, 3272
HphI GGTGA 4 cut(s) 733, 2130, 2398, 3428
Hpy166II GTNNAC 8 cut(s) 295, 651, 1726, 2124, 2673, 2681, 2895, 3226
Hpy8I GTNNAC 8 cut(s) 295, 651, 1726, 2124, 2673, 2681, 2895, 3226
Hpy99I CGWCG 2 cut(s) 476, 2636
HpyCH4III ACNGT 7 cut(s) 730, 2474, 2632, 2670, 2741, 2751, 3148
KpnI GGTACC 1 cut(s) 529
Ksp22I TGATCA 1 cut(s) 2154
KspAI GTTAAC 2 cut(s) 2124, 2895
LguI GCTCTTC 1 cut(s) 197
LmnI GCTCC 2 cut(s) 2035, 2195
Lsp1109I GCAGC 9 cut(s) 128, 661, 1009, 1012, 1435, 1469, 2356, 2498, 2623
LweI GCATC 5 cut(s) 336, 481, 676, 1615, 2365
MaeIII GTNAC 9 cut(s) 714, 1496, 1772, 2206, 2494, 2745, 2860, 2995, 3674
MbiI CCGCTC 1 cut(s) 190
MfeI CAATTG 2 cut(s) 618, 2061
MflI RGATCY 1 cut(s) 3484
MhlI GDGCHC 2 cut(s) 2918, 3146
MluCI AATT 9 cut(s) 310, 385, 618, 775, 1002, 1819, 2061, 2540, 3716
MluI ACGCGT 1 cut(s) 3324
MlyI GAGTC 4 cut(s) 1369, 3115, 3400, 3733
MmeI TCCRAC 5 cut(s) 323, 817, 1492, 2173, 2254
Mph1103I ATGCAT 2 cut(s) 739, 2050
MroXI GAANNNNTTC 1 cut(s) 1927
MseI TTAA 6 cut(s) 842, 1479, 1985, 2123, 2805, 2894
MslI CAYNNNNRTG 2 cut(s) 1253, 3414
MspA1I CMGCKG 3 cut(s) 119, 963, 2489
MspI CCGG 6 cut(s) 510, 1767, 2079, 2090, 3099, 3272
MspR9I CCNGG 2 cut(s) 325, 3100
MunI CAATTG 2 cut(s) 618, 2061
Mva1269I GAATGC 4 cut(s) 219, 256, 283, 2032
MvaI CCWGG 1 cut(s) 325
MvnI CGCG 8 cut(s) 267, 373, 545, 2605, 2759, 3326, 3362, 3368
NciI CCSGG 1 cut(s) 3100
NcoI CCATGG 2 cut(s) 907, 2103
NheI GCTAGC 1 cut(s) 3250
NlaIV GGNNCC 5 cut(s) 527, 606, 2068, 2932, 3123
NmuCI GTSAC 6 cut(s) 714, 1772, 2745, 2860, 2995, 3674
NsbI TGCGCA 1 cut(s) 3242
NsiI ATGCAT 2 cut(s) 739, 2050
NspV TTCGAA 2 cut(s) 1717, 2618
OliI CACNNNNGTG 1 cut(s) 3414
PagI TCATGA 1 cut(s) 3162
PciSI GCTCTTC 1 cut(s) 197
PcsI WCGNNNNNNNCGW 1 cut(s) 590
PctI GAATGC 4 cut(s) 219, 256, 283, 2032
PdmI GAANNNNTTC 1 cut(s) 1927
PflFI GACNNNGTC 1 cut(s) 1664
PleI GAGTC 4 cut(s) 1368, 3114, 3400, 3732
PmaCI CACGTG 2 cut(s) 165, 3412
PmlI CACGTG 2 cut(s) 165, 3412
PpsI GAGTC 4 cut(s) 1368, 3114, 3400, 3732
Ppu21I YACGTR 4 cut(s) 165, 2119, 3233, 3412
PpuMI RGGWCCY 1 cut(s) 3122
PshAI GACNNNNGTC 1 cut(s) 2420
PsiI TTATAA 1 cut(s) 3711
Psp1406I AACGTT 2 cut(s) 584, 1264
Psp5II RGGWCCY 1 cut(s) 3122
Psp6I CCWGG 1 cut(s) 323
PspCI CACGTG 2 cut(s) 165, 3412
PspGI CCWGG 1 cut(s) 323
PspN4I GGNNCC 5 cut(s) 527, 606, 2068, 2932, 3123
PspPI GGNCC 4 cut(s) 1220, 2931, 3122, 3547
PspPPI RGGWCCY 1 cut(s) 3122
PsuI RGATCY 1 cut(s) 3484
PsyI GACNNNGTC 1 cut(s) 1664
PvuII CAGCTG 2 cut(s) 119, 2489
RsaI GTAC 5 cut(s) 181, 287, 527, 903, 3401
RsaNI GTAC 5 cut(s) 180, 286, 526, 902, 3400
RseI CAYNNNNRTG 2 cut(s) 1253, 3414
SapI GCTCTTC 1 cut(s) 197
SaqAI TTAA 6 cut(s) 842, 1479, 1985, 2123, 2805, 2894
Sau96I GGNCC 4 cut(s) 1220, 2931, 3122, 3547
SchI GAGTC 4 cut(s) 1369, 3115, 3400, 3733
ScrFI CCNGG 2 cut(s) 325, 3100
SduI GDGCHC 2 cut(s) 2918, 3146
SfaNI GCATC 5 cut(s) 336, 481, 676, 1615, 2365
SfcI CTRYAG 4 cut(s) 240, 639, 2397, 2470
SfuI TTCGAA 2 cut(s) 1717, 2618
SinI GGWCC 4 cut(s) 1220, 2931, 3122, 3547
SmiMI CAYNNNNRTG 2 cut(s) 1253, 3414
SmlI CTYRAG 8 cut(s) 466, 782, 1741, 1839, 1849, 1881, 1918, 2986
SmoI CTYRAG 8 cut(s) 466, 782, 1741, 1839, 1849, 1881, 1918, 2986
SnaBI TACGTA 1 cut(s) 3233
Sse9I AATT 9 cut(s) 310, 385, 618, 775, 1002, 1819, 2061, 2540, 3716
SspI AATATT 2 cut(s) 1033, 1402
StyD4I CCNGG 2 cut(s) 323, 3098
StyI CCWWGG 3 cut(s) 907, 2103, 2382
TaaI ACNGT 7 cut(s) 730, 2474, 2632, 2670, 2741, 2751, 3148
TaqI TCGA 7 cut(s) 1151, 1717, 2169, 2414, 2618, 3201, 3611
TaqII GACCGA 2 cut(s) 62, 1208
TasI AATT 9 cut(s) 310, 385, 618, 775, 1002, 1819, 2061, 2540, 3716
TatI WGTACW 1 cut(s) 285
TauI GCSGC 3 cut(s) 2525, 3353, 3362
Tru1I TTAA 6 cut(s) 842, 1479, 1985, 2123, 2805, 2894
Tru9I TTAA 6 cut(s) 842, 1479, 1985, 2123, 2805, 2894
TscAI CASTG 7 cut(s) 615, 735, 2350, 2756, 2869, 3153, 3498
TseFI GTSAC 6 cut(s) 714, 1772, 2745, 2860, 2995, 3674
TseI GCWGC 9 cut(s) 116, 674, 1022, 1025, 1448, 1457, 2369, 2486, 2636
Tsp45I GTSAC 6 cut(s) 714, 1772, 2745, 2860, 2995, 3674
TspGWI ACGGA 4 cut(s) 1101, 2863, 2923, 3201
TspRI CASTG 7 cut(s) 615, 735, 2350, 2756, 2869, 3153, 3498
Tth111I GACNNNGTC 1 cut(s) 1664
VpaK11BI GGWCC 4 cut(s) 1220, 2931, 3122, 3547
XagI CCTNNNNNAGG 3 cut(s) 1281, 2386, 3506
XapI RAATTY 1 cut(s) 775
XcmI CCANNNNNNNNNTGG 1 cut(s) 3592
XmiI GTMKAC 2 cut(s) 294, 650
XmnI GAANNNNTTC 1 cut(s) 1927
Zsp2I ATGCAT 2 cut(s) 739, 2050
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.