FvH4_2g38200

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0001951
Physical Location & Seq
Reverse (-)
27652801 .. 27666408
13608 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g38200.t9

Sequence Viewer

Length: 3549 bp
ATGGAGGAAGTAGAGCTTGCCTCCAACTCAAGTGAGGTTTCGGGCACAAACCCACATCCGAAAATGCCCCAACCAGTGCATTCAAACAAGCAGAACCTGGGCAGTGTTTCATTTCTTGGCCTCTTTGCTGCTGCTGATCAAATGGACTATATCTTAATGCTTTTCGGAAGTTTCGGATCCTGTATCCATGGTGCAGCATTACCTGTATTCTTTGTCTTGTTTGGTCGGATGATTGATTCTTTGGGGAATATGGCTATGCATCCTAACGAAATATCTTCCAGGATTTCTGAGTATGCTTTGTACGTGATCTATCTTGGAATTGTTCTTTTTATATCAGCATGGATAGGTGTGGCATCTTGGACGCGAACTGGTGAGAGGCAGACAGCTCGTTTGCGATTGAAGTATCTTCAATCAGTTCTAAGAAAGGATATAAGTTTTTTCGACACTGAAGCCAGAGATGCTAACATCATTTTCCACATTTCAAGTGATACAATATTAGTCCAAGATGCAATAGGAGACAAGACCGGCCACACTTTGCGTTACCTTTCTCAGTTTGTTGTTGGATTCGCCATTGGATTTACATCTGTATGGCAGCTCACGCTTCTTACTTTAGCTGTGGTTCCACTGATAGCTATTGCAGGGGGTGCTTATACCATAATCATGTCCACCTTATCAGAAAAAGGTGAAGCTGCTTACGCTGAAGCCGGAAAAGTTGCTGAAGAGGTTATTTCACAGATTCGTACTGTGTACTCATCTGTGGGAGAGGACAAAGCTATTGAAACGTACTCTGAGTCACTTAACAAGGCACTCAAACTTGGTAAGAAAAGTGGGGTTGCAAAGGGAGTAGGTGTAGGCTTTACATATGGACTGTTGTTTTCTGCGTGGGCATTGCTCCTCTGTGCTCTTGGTCAAGCTACTCCAAACCTGGCTGCCATTTCTAAAGGCCGAGCTGCTGCTGCAAATATCATGAACATGATTGAATCAGATTCTAACACCTCTAATGTATCAGCCAAGGGAGTAGTGTTGCCAAAAGTAACAGGGAAGATTGAGTTTTGTGATGTTTCTTTTGCCTATCCATCACGACCCAACATGGTGTTCGAAAACCTGAGCTTTTCGATTAGTGCTGGCAGGACTTTTGCAGTTGTTGGTCCCAGTGGTTCAGGAAAGAGCACCATTATATCCATGGTTCAACGATTCTACAACCCCTCTTCAGGTAAAATACTGTTGGACGGAAATGATGTTTCAACTCTACAACTGAGATGGCAACGGGAACAGATGGGATTGGTAAGTCAAGAACCAGCATTGTTTGCCACTACTATAGCTGACAATATCCTGTTTGGTAAAGAAGACGCCGGCATGGATGAGATCATAGAAGCTGCTAAAGCTGCCAATGCACATTCTTTTATTCAAGGTTTACCTGATGGCTACAAAACTCAGGCTGGAGAGGGAGGAACTCAGCTTTCAGGAGGGCAGAAACAGAGAATAGCTATTGCTAGAGCAGTTCTGAGAAACCCGAAAATATTGCTCTTAGATGAGGCCACTAGTGCTCTAGATGCAGAATCAGAACAAATTGTTCAGCAGGCACTGGATAAAATTATGTCACATAGAACTACAATCATTGTTGCTCACCGGCTTTCCACTATCCGCGATGTGGATGAAATCATTGTGCTGAAGAATGGTCAGGTTGTTGAGAGTGGCAACCACTCAGAACTGATGTGTAAGAAAGGTGAGTATGCAAGTCTGGTGAGCTTGCAGGATCAAAGTGATCAAAAGCTGTCACAAAATAGCTTTACTCCTAGTCGATCAATATGGGAATTAGTCAAGCTAAATGCACCTGAGTGGCCTTATGCGATACTCGGGTCAGTTGGTGCAGTTCTGGCAGGAATGGAAGCTCCTCTCTTTGCCCTTGGATTAACTCACATCTTGTCTGCATTTTATTCCCCAACTGGTTCTGAAATCAGACATGAAGTTGACAAGGTAACTCTCATGTTTGTTGCACTAGCTGGTATTACTGTTCCAGTATATCTGTTGCAGCATTACTTCTACACATTGATGGGGGAGCGGCTCACAAGTCGTGTGCGCCTATTAATGTTCTCAGCTATACTTTCGAATGAAGTTGGGTGGTTTGATTTGGATGAGAACAACACTGGTTCACTAACATCAATCCTAGCTGGCAATGCAACATTAGTCCGAAGCGCTCTAGCTGACCGTTTATCAATAATAGTGCAGAATATATCACTGACAGCAACTGCATTTGTTATTTCTTTCACATTAAGTTGGCGTATTGCAGCTGTTGTGGTTGCCACCCTCCCCCTACTAGTTGGAGCTTCCATTACTGAGGGGTTTGGAGGAGACTACAATACTGCTTATGCTAAAGCAACTTCCCTAGCTCGTGAAGCAATTGCCAACATACGTACTGTTGCTGCATTTGGGGCTGAGGATCGGATATCACTTCAGTTTGCATCAGAGCTAATCCGGCCAAATAAGAAAGCAGTTCTTCGAGGTCTCATTTCCGGTTTTTGCTATGGCCTATCACAGTTTTTTGCATTCTGTTCCTATGCACTCGGCCTTTGGTATGCATCAGTTCTAATCAAGCACAACAACTCCAATTTTGGAGACATCATGAAGTCCTTTTTTGTGTTGATTGTCACTGCACTGTGCATAGCAGAAACTCTTGCTCTTGCTCCAGACATTGTAAAGGGGTCACAAGCACTAGAGCCAATTTTTAGAATACTTAAAAGAGAAACAGCCATACACTCTAATGATCCAACAACAAATGTGGTTGCTGATATCAGAGGAGACATAGAATTCAGAAATGTAAGCTTTCATTACCCTGCACGATCTGATATCACCATTTTCGACAACTTGAATCTGAGGGTGTCAGCAGGTAAAAGTCTTGCAGTTGTTGGTCCAAGTGGTTCGGGGAAGAGTACTGTGATTGCACTAGTAATGAGATTTTATGACCCTATTTCCGGAGCAGTTATAATTGATGGACATGATATCAAAGGCTTAAACTTGAAATCTTTGAGGAAGAAAATAGGACTAGTCCAGCAAGAGCCAGCGTTGTTCTCAACAACAGTGTATGACAACATCAAGTATGGGAATGAGGAAGCATCCGAAGTTGAGGTAATGAGGGCAGCAGAAGCAGCAAATGCCCATGAATTCATAAGCAGAATGCCTGAAGGGTTCAAAACTCAGGTTGGAGAGAAAGGAGTGCAGTTATCTGGGGGGCAGAAACAGCGAGTGGCAATTGCTAGAGCTATACTGAAAGATCCATCGATTCTTCTTTTAGATGAAGCAACAAGTGCATTGGACACAGAGTCTGAGAAGCTGGTTCAGGAGTCCCTTGATAAGCTAATGGAAGGCCGAACAACCATTTTGGTAGCACACAGATTGTCAACTACTCGTGATGCAAACAAGATTGCACTGCTGCAAAATGGTAGGGTGGTGGAAATGGGCAGCCATGAGCAGCTGATTGGAACACCCGGTAGTCTGTATAAACAATTAGTCAGACTACAGCAAGAGAAGAGTGAACAAGTGCTTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1183

Amino Acids

128.02

Weight (kDa)

6.26

Isoelectric Point (pI)

37.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 55 - 242 3.6e-35 ABC transporter transmembrane region
ABC_membrane PF00664 263 - 350 6.8e-10 ABC transporter transmembrane region
ABC_tran PF00005 420 - 568 4.5e-34 ABC transporter
SMC_N PF02463 450 - 611 8.8e-06 RecF/RecN/SMC N terminal domain
ABC_membrane PF00664 672 - 938 9.5e-47 ABC transporter transmembrane region
ABC_tran PF00005 1007 - 1155 2.6e-34 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2984
Acc36I ACCTGC 1 cut(s) 2876
AccBSI CCGCTC 1 cut(s) 2062
AccII CGCG 2 cut(s) 364, 1647
AccIII TCCGGA 1 cut(s) 2972
AciI CCGC 2 cut(s) 1645, 2062
AclWI GGATC 6 cut(s) 171, 184, 1764, 2448, 2759, 3266
AcoI YGGCCR 2 cut(s) 526, 2477
AcsI RAATTY 2 cut(s) 2807, 3161
AcuI CTGAAG 7 cut(s) 468, 720, 738, 1194, 1691, 2438, 3201
AcyI GRCGYC 1 cut(s) 1350
AfaI GTAC 6 cut(s) 302, 742, 749, 785, 2416, 2932
AfeI AGCGCT 1 cut(s) 2197
AfiI CCNNNNNNNGG 3 cut(s) 1211, 1651, 2972
AhdI GACNNNNNGTC 1 cut(s) 3319
AhlI ACTAGT 4 cut(s) 1541, 2317, 2944, 3043
AjnI CCWGG 3 cut(s) 96, 278, 924
AjuI GAANNNNNNNTTGG 2 cut(s) 1079, 1111
AleI CACNNNNGTG 1 cut(s) 1837
Alw21I GWGCWC 3 cut(s) 904, 1172, 1549
Alw26I GTCTC 5 cut(s) 510, 2346, 2510, 2610, 2793
AlwI GGATC 6 cut(s) 171, 184, 1764, 2448, 2759, 3266
AlwNI CAGNNNCTG 4 cut(s) 97, 1585, 2249, 3323
Ama87I CYCGRG 1 cut(s) 1856
Aor13HI TCCGGA 1 cut(s) 2972
Aor51HI AGCGCT 1 cut(s) 2197
AoxI GGCC 9 cut(s) 118, 526, 943, 1536, 1841, 2477, 2527, 2566, 3364
ApoI RAATTY 2 cut(s) 2807, 3161
ArsI GACNNNNNNTTYG 2 cut(s) 373, 405
AseI ATTAAT 1 cut(s) 2087
AspLEI GCGC 2 cut(s) 2082, 2198
AspS9I GGNCC 2 cut(s) 1148, 2909
AsuC2I CCSGG 1 cut(s) 3486
AsuHPI GGTGA 6 cut(s) 383, 695, 1619, 1739, 1756, 2842
AsuII TTCGAA 2 cut(s) 1098, 2108
AvaI CYCGRG 1 cut(s) 1856
AvaII GGWCC 2 cut(s) 1148, 2909
BaeGI GKGCMC 1 cut(s) 47
BaeI ACNNNNGTAYC 2 cut(s) 1844, 1877
BamHI GGATCC 1 cut(s) 176
BauI CACGAG 2 cut(s) 2391, 3405
BbsI GAAGAC 1 cut(s) 1353
Bbv12I GWGCWC 3 cut(s) 904, 1172, 1549
BbvCI CCTCAGC 1 cut(s) 2436
BccI CCATC 7 cut(s) 1084, 1254, 1270, 1415, 2047, 2984, 3283
BcgI CGANNNNNNTGC 4 cut(s) 368, 402, 1504, 1538
BciT130I CCWGG 3 cut(s) 98, 280, 926
BciVI GTATCC 1 cut(s) 194
BclI TGATCA 2 cut(s) 136, 1765
BcnI CCSGG 1 cut(s) 3486
BcoDI GTCTC 5 cut(s) 510, 2346, 2510, 2610, 2793
BcuI ACTAGT 4 cut(s) 1541, 2317, 2944, 3043
BfmI CTRYAG 2 cut(s) 1317, 3515
BfoI RGCGCY 1 cut(s) 2199
BfuAI ACCTGC 1 cut(s) 2876
BfuI GTATCC 1 cut(s) 194
BmcAI AGTACT 1 cut(s) 2932
Bme1390I CCNGG 4 cut(s) 98, 280, 926, 3486
Bme18I GGWCC 2 cut(s) 1148, 2909
BmeRI GACNNNNNGTC 1 cut(s) 3319
BmeT110I CYCGRG 1 cut(s) 1856
BmgT120I GGNCC 2 cut(s) 1148, 2909
BmiI GGNNCC 3 cut(s) 178, 621, 1150
BmrFI CCNGG 4 cut(s) 98, 280, 926, 3486
BmrI ACTGGG 1 cut(s) 1146
BmsI GCATC 9 cut(s) 268, 362, 448, 496, 1543, 2471, 2588, 3122, 3400
BmuI ACTGGG 1 cut(s) 1146
BpiI GAAGAC 1 cut(s) 1353
BplI GAGNNNNNCTC 1 cut(s) 37
BpmI CTGGAG 2 cut(s) 1461, 2670
Bpu10I CCTNAGC 2 cut(s) 1106, 2436
Bpu14I TTCGAA 2 cut(s) 1098, 2108
BpuEI CTTGAG 1 cut(s) 13
BpuMI CCSGG 1 cut(s) 3486
Bsa29I ATCGAT 1 cut(s) 3278
BsaAI YACGTR 2 cut(s) 304, 2414
BsaBI GATNNNNATC 1 cut(s) 580
BsaHI GRCGYC 1 cut(s) 1350
BsaI GGTCTC 1 cut(s) 2510
BsaJI CCNNGG 5 cut(s) 97, 187, 1011, 1182, 1906
BsaWI WCCGGW 2 cut(s) 2513, 2972
BsaXI ACNNNNNCTCC 4 cut(s) 834, 864, 2588, 2618
Bsc4I CCNNNNNNNGG 3 cut(s) 1211, 1651, 2972
Bse118I RCCGGY 3 cut(s) 524, 1352, 1629
Bse1I ACTGG 7 cut(s) 74, 373, 1152, 1590, 1951, 2018, 2152
Bse3DI GCAATG 2 cut(s) 887, 2182
Bse8I GATNNNNATC 1 cut(s) 580
BseAI TCCGGA 1 cut(s) 2972
BseBI CCWGG 3 cut(s) 98, 280, 926
BseCI ATCGAT 1 cut(s) 3278
BseDI CCNNGG 5 cut(s) 97, 187, 1011, 1182, 1906
BseGI GGATG 7 cut(s) 55, 234, 259, 1366, 1660, 2140, 3113
BseJI GATNNNNATC 1 cut(s) 580
BseLI CCNNNNNNNGG 3 cut(s) 1211, 1651, 2972
BseMI GCAATG 2 cut(s) 887, 2182
BseNI ACTGG 7 cut(s) 74, 373, 1152, 1590, 1951, 2018, 2152
BseRI GAGGAG 4 cut(s) 884, 1884, 2364, 2811
BseSI GKGCMC 1 cut(s) 47
BsgI GTGCAG 6 cut(s) 213, 1890, 2246, 2637, 2820, 3236
Bsh1236I CGCG 2 cut(s) 364, 1647
BshFI GGCC 9 cut(s) 120, 528, 945, 1538, 1843, 2479, 2529, 2568, 3366
BshVI ATCGAT 1 cut(s) 3278
BsiHKAI GWGCWC 3 cut(s) 904, 1172, 1549
BsiHKCI CYCGRG 1 cut(s) 1856
BsiSI CCGG 8 cut(s) 525, 705, 1353, 1630, 2476, 2514, 2973, 3486
BslFI GGGAC 2 cut(s) 1134, 3328
BslI CCNNNNNNNGG 3 cut(s) 1211, 1651, 2972
BsmAI GTCTC 5 cut(s) 510, 2346, 2510, 2610, 2793
BsmFI GGGAC 2 cut(s) 1134, 3328
BsmI GAATGC 3 cut(s) 79, 2546, 3180
BsnI GGCC 9 cut(s) 120, 528, 945, 1538, 1843, 2479, 2529, 2568, 3366
Bso31I GGTCTC 1 cut(s) 2510
BsoBI CYCGRG 1 cut(s) 1856
Bsp119I TTCGAA 2 cut(s) 1098, 2108
Bsp1286I GDGCHC 4 cut(s) 47, 904, 1172, 1549
Bsp13I TCCGGA 1 cut(s) 2972
Bsp19I CCATGG 2 cut(s) 187, 1182
BspACI CCGC 2 cut(s) 1645, 2062
BspANI GGCC 9 cut(s) 120, 528, 945, 1538, 1843, 2479, 2529, 2568, 3366
BspDI ATCGAT 1 cut(s) 3278
BspEI TCCGGA 1 cut(s) 2972
BspFNI CGCG 2 cut(s) 364, 1647
BspHI TCATGA 2 cut(s) 966, 2622
BspLI GGNNCC 3 cut(s) 178, 621, 1150
BspMI ACCTGC 1 cut(s) 2876
BspPI GGATC 6 cut(s) 171, 184, 1764, 2448, 2759, 3266
BspT104I TTCGAA 2 cut(s) 1098, 2108
BspTNI GGTCTC 1 cut(s) 2510
BsrBI CCGCTC 1 cut(s) 2062
BsrDI GCAATG 2 cut(s) 887, 2182
BsrFI RCCGGY 3 cut(s) 524, 1352, 1629
BsrI ACTGG 7 cut(s) 74, 373, 1152, 1590, 1951, 2018, 2152
BssAI RCCGGY 3 cut(s) 524, 1352, 1629
BssECI CCNNGG 5 cut(s) 97, 187, 1011, 1182, 1906
BssNI GRCGYC 1 cut(s) 1350
BssSI CACGAG 2 cut(s) 2391, 3405
BssT1I CCWWGG 4 cut(s) 187, 1011, 1182, 1906
Bst2BI CACGAG 2 cut(s) 2391, 3405
Bst2UI CCWGG 3 cut(s) 98, 280, 926
Bst6I CTCTTC 4 cut(s) 714, 1213, 2921, 3521
BstACI GRCGYC 1 cut(s) 1350
BstAPI GCANNNNNTGC 4 cut(s) 644, 1307, 3152, 3305
BstBAI YACGTR 2 cut(s) 304, 2414
BstBI TTCGAA 2 cut(s) 1098, 2108
BstC8I GCNNGC 7 cut(s) 18, 1126, 1354, 1581, 1751, 2173, 3060
BstDSI CCRYGG 2 cut(s) 187, 1182
BstF5I GGATG 7 cut(s) 55, 234, 259, 1366, 1660, 2140, 3113
BstFNI CGCG 2 cut(s) 364, 1647
BstH2I RGCGCY 1 cut(s) 2199
BstHHI GCGC 2 cut(s) 2082, 2198
BstMAI GTCTC 5 cut(s) 510, 2346, 2510, 2610, 2793
BstNI CCWGG 3 cut(s) 98, 280, 926
BstSCI CCNGG 4 cut(s) 96, 278, 924, 3484
BstSFI CTRYAG 2 cut(s) 1317, 3515
BstSLI GKGCMC 1 cut(s) 47
BstSNI TACGTA 1 cut(s) 2414
BstUI CGCG 2 cut(s) 364, 1647
BstV2I GAAGAC 1 cut(s) 1353
BstX2I RGATCY 2 cut(s) 176, 3271
BstYI RGATCY 2 cut(s) 176, 3271
Bsu15I ATCGAT 1 cut(s) 3278
BsuI GTATCC 1 cut(s) 194
BsuRI GGCC 9 cut(s) 120, 528, 945, 1538, 1843, 2479, 2529, 2568, 3366
BsuTUI ATCGAT 1 cut(s) 3278
BtgI CCRYGG 2 cut(s) 187, 1182
BtgZI GCGATG 1 cut(s) 1662
BtsCI GGATG 7 cut(s) 55, 234, 259, 1366, 1660, 2140, 3113
BtsI GCAGTG 3 cut(s) 109, 2649, 3425
BveI ACCTGC 1 cut(s) 2876
Cac8I GCNNGC 7 cut(s) 18, 1126, 1354, 1581, 1751, 2173, 3060
CaiI CAGNNNCTG 4 cut(s) 97, 1585, 2249, 3323
CciI TCATGA 2 cut(s) 966, 2622
CfoI GCGC 2 cut(s) 2082, 2198
Cfr10I RCCGGY 3 cut(s) 524, 1352, 1629
Cfr13I GGNCC 2 cut(s) 1148, 2909
ClaI ATCGAT 1 cut(s) 3278
CseI GACGC 2 cut(s) 370, 1358
Csp6I GTAC 6 cut(s) 301, 741, 748, 784, 2415, 2931
CspCI CAANNNNNGTGG 2 cut(s) 2760, 2795
CviQI GTAC 6 cut(s) 301, 741, 748, 784, 2415, 2931
DriI GACNNNNNGTC 1 cut(s) 3319
EaeI YGGCCR 2 cut(s) 526, 2477
Eam1104I CTCTTC 4 cut(s) 714, 1213, 2921, 3521
Eam1105I GACNNNNNGTC 1 cut(s) 3319
EarI CTCTTC 4 cut(s) 714, 1213, 2921, 3521
Eco105I TACGTA 1 cut(s) 2414
Eco130I CCWWGG 4 cut(s) 187, 1011, 1182, 1906
Eco31I GGTCTC 1 cut(s) 2510
Eco32I GATATC 4 cut(s) 2448, 2791, 2848, 3001
Eco47I GGWCC 2 cut(s) 1148, 2909
Eco47III AGCGCT 1 cut(s) 2197
Eco57I CTGAAG 7 cut(s) 468, 720, 738, 1194, 1691, 2438, 3201
Eco88I CYCGRG 1 cut(s) 1856
EcoRI GAATTC 2 cut(s) 2807, 3161
EcoRII CCWGG 3 cut(s) 96, 278, 924
EcoRV GATATC 4 cut(s) 2448, 2791, 2848, 3001
EcoT14I CCWWGG 4 cut(s) 187, 1011, 1182, 1906
EcoT22I ATGCAT 2 cut(s) 261, 2581
ErhI CCWWGG 4 cut(s) 187, 1011, 1182, 1906
FalI AAGNNNNNCTT 3 cut(s) 32, 2481, 2513
FaqI GGGAC 2 cut(s) 1134, 3328
FauNDI CATATG 1 cut(s) 862
FbaI TGATCA 2 cut(s) 136, 1765
FokI GGATG 7 cut(s) 42, 241, 246, 1373, 1667, 2147, 3100
GlaI GCGC 2 cut(s) 2081, 2197
GsuI CTGGAG 2 cut(s) 1461, 2670
HaeII RGCGCY 1 cut(s) 2199
HaeIII GGCC 9 cut(s) 120, 528, 945, 1538, 1843, 2479, 2529, 2568, 3366
HapII CCGG 8 cut(s) 525, 705, 1353, 1630, 2476, 2514, 2973, 3486
HgaI GACGC 2 cut(s) 370, 1358
HhaI GCGC 2 cut(s) 2082, 2198
Hin1I GRCGYC 1 cut(s) 1350
Hin6I GCGC 2 cut(s) 2080, 2196
HinP1I GCGC 2 cut(s) 2080, 2196
HincII GTYRAC 2 cut(s) 1972, 3399
HindII GTYRAC 2 cut(s) 1972, 3399
HindIII AAGCTT 1 cut(s) 2821
HpaII CCGG 8 cut(s) 525, 705, 1353, 1630, 2476, 2514, 2973, 3486
HphI GGTGA 6 cut(s) 383, 695, 1619, 1739, 1756, 2842
Hpy166II GTNNAC 7 cut(s) 666, 748, 1415, 1972, 2153, 3399, 3533
Hpy8I GTNNAC 7 cut(s) 666, 748, 1415, 1972, 2153, 3399, 3533
HpyAV CCTTC 2 cut(s) 3176, 3356
HpyCH4IV ACGT 3 cut(s) 303, 782, 2413
HpySE526I ACGT 3 cut(s) 303, 782, 2413
Hsp92I GRCGYC 1 cut(s) 1350
HspAI GCGC 2 cut(s) 2080, 2196
Kpn2I TCCGGA 1 cut(s) 2972
KroI GCCGGC 1 cut(s) 1352
KroNI GCCGGC 1 cut(s) 1354
Ksp22I TGATCA 2 cut(s) 136, 1765
LmnI GCTCC 6 cut(s) 897, 1897, 2059, 2324, 2689, 2975
LweI GCATC 9 cut(s) 268, 362, 448, 496, 1543, 2471, 2588, 3122, 3400
MaeII ACGT 3 cut(s) 303, 782, 2413
MaeIII GTNAC 8 cut(s) 539, 792, 1033, 1599, 1776, 1978, 2647, 2703
MbiI CCGCTC 1 cut(s) 2062
MfeI CAATTG 2 cut(s) 2400, 3249
MflI RGATCY 2 cut(s) 176, 3271
MhlI GDGCHC 4 cut(s) 47, 904, 1172, 1549
MlyI GAGTC 3 cut(s) 800, 3329, 3350
MmeI TCCRAC 7 cut(s) 48, 206, 541, 1206, 2302, 2792, 3181
Mph1103I ATGCAT 2 cut(s) 261, 2581
MroI TCCGGA 1 cut(s) 2972
MroNI GCCGGC 1 cut(s) 1352
MseI TTAA 8 cut(s) 155, 798, 1913, 2087, 2273, 2736, 3011, 3547
MslI CAYNNNNRTG 6 cut(s) 586, 659, 971, 1837, 2051, 2760
MspA1I CMGCKG 2 cut(s) 2291, 3472
MspI CCGG 8 cut(s) 525, 705, 1353, 1630, 2476, 2514, 2973, 3486
MspR9I CCNGG 4 cut(s) 98, 280, 926, 3486
MunI CAATTG 2 cut(s) 2400, 3249
Mva1269I GAATGC 3 cut(s) 79, 2546, 3180
MvaI CCWGG 3 cut(s) 98, 280, 926
MvnI CGCG 2 cut(s) 364, 1647
NaeI GCCGGC 1 cut(s) 1354
NciI CCSGG 1 cut(s) 3486
NcoI CCATGG 2 cut(s) 187, 1182
NdeI CATATG 1 cut(s) 862
NgoMIV GCCGGC 1 cut(s) 1352
NlaIV GGNNCC 3 cut(s) 178, 621, 1150
NmeAIII GCCGAG 2 cut(s) 971, 2544
NmuCI GTSAC 5 cut(s) 792, 1599, 1776, 2647, 2703
NsiI ATGCAT 2 cut(s) 261, 2581
NspV TTCGAA 2 cut(s) 1098, 2108
OliI CACNNNNGTG 1 cut(s) 1837
PagI TCATGA 2 cut(s) 966, 2622
PctI GAATGC 3 cut(s) 79, 2546, 3180
PdiI GCCGGC 1 cut(s) 1354
PfeI GAWTC 9 cut(s) 236, 564, 736, 980, 986, 1194, 1559, 2869, 3280
PfoI TCCNGGA 1 cut(s) 278
PleI GAGTC 3 cut(s) 799, 3328, 3349
PpsI GAGTC 3 cut(s) 799, 3328, 3349
Ppu21I YACGTR 2 cut(s) 304, 2414
PshBI ATTAAT 1 cut(s) 2087
PsiI TTATAA 1 cut(s) 2984
Psp6I CCWGG 3 cut(s) 96, 278, 924
PspGI CCWGG 3 cut(s) 96, 278, 924
PspN4I GGNNCC 3 cut(s) 178, 621, 1150
PspPI GGNCC 2 cut(s) 1148, 2909
PstNI CAGNNNCTG 4 cut(s) 97, 1585, 2249, 3323
PsuI RGATCY 2 cut(s) 176, 3271
PvuII CAGCTG 2 cut(s) 2291, 3472
RsaI GTAC 6 cut(s) 302, 742, 749, 785, 2416, 2932
RsaNI GTAC 6 cut(s) 301, 741, 748, 784, 2415, 2931
RseI CAYNNNNRTG 6 cut(s) 586, 659, 971, 1837, 2051, 2760
SaqAI TTAA 8 cut(s) 155, 798, 1913, 2087, 2273, 2736, 3011, 3547
Sau96I GGNCC 2 cut(s) 1148, 2909
ScaI AGTACT 1 cut(s) 2932
SchI GAGTC 3 cut(s) 800, 3329, 3350
ScrFI CCNGG 4 cut(s) 98, 280, 926, 3486
SduI GDGCHC 4 cut(s) 47, 904, 1172, 1549
SfaNI GCATC 9 cut(s) 268, 362, 448, 496, 1543, 2471, 2588, 3122, 3400
SfcI CTRYAG 2 cut(s) 1317, 3515
SfuI TTCGAA 2 cut(s) 1098, 2108
SinI GGWCC 2 cut(s) 1148, 2909
SmiMI CAYNNNNRTG 6 cut(s) 586, 659, 971, 1837, 2051, 2760
SmlI CTYRAG 1 cut(s) 28
SmoI CTYRAG 1 cut(s) 28
SnaBI TACGTA 1 cut(s) 2414
SpeI ACTAGT 4 cut(s) 1541, 2317, 2944, 3043
SsiI CCGC 2 cut(s) 1645, 2062
SspI AATATT 2 cut(s) 495, 1521
StyD4I CCNGG 4 cut(s) 96, 278, 924, 3484
StyI CCWWGG 4 cut(s) 187, 1011, 1182, 1906
TaiI ACGT 3 cut(s) 306, 785, 2416
TaqI TCGA 8 cut(s) 441, 1098, 1115, 1801, 2108, 2500, 2859, 3278
TatI WGTACW 2 cut(s) 747, 2930
TauI GCSGC 1 cut(s) 2065
TfiI GAWTC 9 cut(s) 236, 564, 736, 980, 986, 1194, 1559, 2869, 3280
Tru1I TTAA 8 cut(s) 155, 798, 1913, 2087, 2273, 2736, 3011, 3547
Tru9I TTAA 8 cut(s) 155, 798, 1913, 2087, 2273, 2736, 3011, 3547
TseFI GTSAC 5 cut(s) 792, 1599, 1776, 2647, 2703
Tsp45I GTSAC 5 cut(s) 792, 1599, 1776, 2647, 2703
TspGWI ACGGA 1 cut(s) 1245
VpaK11BI GGWCC 2 cut(s) 1148, 2909
VspI ATTAAT 1 cut(s) 2087
XapI RAATTY 2 cut(s) 2807, 3161
XbaI TCTAGA 1 cut(s) 1549
XcmI CCANNNNNNNNNTGG 1 cut(s) 1180
ZrmI AGTACT 1 cut(s) 2932
Zsp2I ATGCAT 2 cut(s) 261, 2581
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.