Rw6G037610

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0001951
Physical Location & Seq
Forward (+)
61900115 .. 61904535
4421 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G037610.1

Sequence Viewer

Length: 3567 bp
ATGGACCATCTGTTAATGCTTTTCGGAAGTTTCGGAGCTCGTATCCATGGTGCTGCACTCCCTGTATTCTTTGTCTTGTTTGGTGGGATGATTGATTCTTTGGGTCATATGGCTAAGCACCCTAACAAAATGTCATCCCGGATTTCTGAGTATGCTTTGTACTTGATCTATCTTGGAATTGTTCTTTTTATATCAGCATGGATAGGTGTTGCATCTTGGACGCGAACTGGTGAGAGGCAGACAGCTCGTTTGCAATTGAAGTATCTTCAATCAGTTTTAAGGAAGGATATTGATTTTTTCGACACTGAAGCCAGAGACACTAACATCATTTTCCACATTTCAAGTGATGCTATACTAGTCCAAGATGCAATAGGTGACAAGTTCATTGTAGGATTTGCCATTGGATTTGCATCGGTGCGGCAGCTTACGCTTCTTACCTTAGCTGTGGTTCCACTGATAGCTCTTGCAGGGGGAGCCTATACCATAGTCATGTCAAGCTTATCAGAAAAAGGTGAGGCTGCTTATGCTGAAGCTGGAAAAGTTGCTGAAGAGGTGATTTCGCAGATTCGTACTGTGTACTCATTTGTGGGAGAGGACAAAGCAATTGAAACATACTCTCAGTCACTTATCAAGGCACTCAAACTTGGTGAGAAAGGTGGGCTTGCTAAGGGACTAGGTGTAGGCCTTACATATGGACTGTTGTTTTGTGCTTGGGCATTGCTTCTCTGGTATGCCAGCATACTTGTAAGACATCATGACACAAATGGAGGCAAAGCATTTTCAACAATCATCAATGTCATCGTCAGTGGATTTGCTCTTGGCCAAGCTACCCCAAACCTGGCTGCCATTTCTAAAGGCCGAGCTGCTGCTGCAAATATCATGAAGATGATTGAATCAGATTCTAACTCCTCTAAAGTATCAGACAAAGGAGTAATGTTGCCAAAAGTATCAGGGCAGATTGTGTTTTCTGATGTTTGTTTTGCCTATCCATCACGACCCAACATGGTGTTCGAAAACCTGAGCTTTTCGATTAGTGCTGGCAAGACTTTTGCAGTTGTCTGTCCCAGTGGTTCAGGAAAGAGCACCATTATATCCATGGTTCAACGGTTCTACAACTCGTCTTCAGGTAACATACTGTTGGATGGACATGATGTTTCCACTCTCCAATTGAGATGGTTGCGTGAACAGATGGGATTGGTAAGTCAAGAACCAGCATTGTTTGCTACTACTATAGCTGACAACATCCTGTTGGGTAAAGAAGACGCCGACATGGATGAGATCATAGAAGCTGCTAAAGCTGCCAATGCACATTCTTTTATTCAAGGGAGGAACTCAGGAACTCAGCTTTCTGGAGGGCAGAAGCAGAGAATAGCAATTGAGAGAGCAGTTCTGAGAAACCCGAAAATATTACTCTTGGATGAGGCCACTAGTGCTCTTGATGCAGAATCAGAACAAATTGTTCAGCAAGCACTGGATAAAATCATGTCACATAGAACTACAATCATTGTTGCTCACAGGCTTTCCACTATCCGCGATGTGGATACAATCATTGTGCTGAAAAATGGTCAGGTTGTTCAGAGTGGCAGCCACTCAGAACTGGTGTGTAAGAAAGGTGAGTATGCTAGTCTGGTGAGCTTGCAGGTATTGGAACATGACAAACGTTCTAGCTCACTATCTCAGTCTGTAAGTGCAACAAATGCAAGCTTTCGAGAAAGCAATGATAGAAATCAGCAGGTTGTTAAGTCAATTACAACAAGAGAGCAGGAGACAAGTGATCAAAAGCTGTCCAAAAGAAGTTCTTCTCCTAGTTCATCAATATGGGAATTAGTAAAACTAAATGCACAGGAGTGGCCTTACACCATACTCGGGTCAGTTGGTGCAATTCTGGCAGGAATGGAAGCTCCTCTCTTTGCCCTTGGAATAACTCACATCTTGGCTGCATTTTATGCTCCAACTAGTTCCGAAATCAAACATGAGGTTAACAAGGTAATTCTCATGTTTGTTGTACTAGCAGGTATTACTGTTCCAATGTATCTGTTGCAGCACTACTTCTACACATTGATGGGGGAGCGGCTCACAAGTCGTGTGCGCCTATTAATGTTCTCAGATTCTTTTCTGCTTGCCATTTACTTACTTAACACTATCCTTTCAAACGATGTTGGGTGGTTTGATTTGAATGAGAATAGCACTGGTTCACTGACATCAATCCTAGCTACCAATGCAACATTAGTCCGAAGCGCTCTAGCTGACCACCTATCAACAATTGTGCAGAATGTATCACTCGCAGTAACTGCATTTGTTATTGCCTTCACATTAAGTTGGCGTATCGCAGCTGTTGTGGTTGCTACCCTCCCCCTACTTATTGGAGCTTCCATTGCTGAGCAACTGTTTCTTAAGGGATTTGGTGGAGACTACAACAGTGCTTATGCTAAAGCAACTTCCCTAGCTCGTGAAGCAATTGCCAACATACGCACTGTTGCTGCATTTGGGGCTGAGGATCGGATATCACTTCAGTTTGCTTCAGAGCTAAACCAGCCAAATAAGAAAGCAGTTCTTCGAGGTCACATTTCCGGTTTTTGCTATGGCCTATCACAGTTCTTTGCATTCTGTTCCTATGCACTCGGCCTTTGGTATGCATCTGTTCTAATCAAGCACAAAAACTCTAATTTTGGAGACATCATGAAGTCCTTTATGGTGTTAATTGTCACTGCAATGGGCATAGCAGAAACTCTTGCTCTTGCTCCAGACATTGTAAAGGGGTCACAAGCACTTGGATTGATTTTTAGTATACTCAACAGAGAAACAGCCATACATTCTAATGATCCCACATCAAATGTGGTTGCTGATATCAGAGGAGACATAGAATTCAGAAATGTGCGGTTTTGGTACCCTGCACGGTCTGATATCACCATTTTTGACAACTTGAATTTGAAGGTGTCAACAGGAAAGAGTCTTGCAGTTGTCGGTCCAAGTGGTTCACGGAACAGTACTCTGATTGCACTAGTAATGAGATTTTATGACCCTATTTTCGGAGTAGTTATGATTGATGGACATGATATCAAAGGCTTAAACTTGAAATCTTTGAGGAAGAAAATAGGGCTAGTCCAGCAAGAGCCAGCATTGTTCTCAACAACAGTTTATGACAACATCAAATATGGGAATGAGGAAGCATCCGAAGTTGAGGTAATGAGGGCAGCAGAAGCAGCAAATGCCCATGAATTCATAAGCAGAATGCCTGAAGGGCTGAAGGTGCAGTTATCTGGTGGGCAGAAACAGCTGGTGGCTATTGCTAGAGCTATACTGAAAGACCCATCGATACTTCTTTTAGATGAAGCAACAAGTGCGTTGGACACAGAGGCCGAGAAACTGGTTCAGGAGGCTCTAGATAAGCTAATGGAAGGCCGAACCACCATTTTGGTAGCACACAGGTTGTCAACTATACGTGACGCAAACAAGATTGCCCTGCTACAAAATGGTAGGGTGGTGGAAATGGGTAGCCATGAGCAGCTGATTGGAACCCCCGGAAGTCTGTATAAACAATTAGTTGGTCTAGAGCAAGAGGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1188

Amino Acids

129.1

Weight (kDa)

6.95

Isoelectric Point (pI)

38.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 9 - 268 4.4e-41 ABC transporter transmembrane region
ABC_tran PF00005 338 - 477 6.7e-31 ABC transporter
SMC_N PF02463 617 - 1154 4.3e-07 RecF/RecN/SMC N terminal domain
ABC_membrane PF00664 621 - 905 1e-45 ABC transporter transmembrane region
ABC_tran PF00005 973 - 1114 9.5e-28 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 1630, 1723, 2003
Acc65I GGTACC 1 cut(s) 2886
AccB1I GGYRCC 1 cut(s) 2886
AccBSI CCGCTC 1 cut(s) 2071
AccI GTMKAC 1 cut(s) 2788
AccII CGCG 2 cut(s) 223, 1533
AciI CCGC 4 cut(s) 418, 1531, 2071, 2878
AclI AACGTT 1 cut(s) 1660
AclWI GGATC 2 cut(s) 2505, 2816
AcoI YGGCCR 1 cut(s) 820
AcsI RAATTY 3 cut(s) 2864, 2926, 3218
AcuI CTGAAG 8 cut(s) 327, 549, 567, 1107, 2495, 2505, 3258, 3266
AcyI GRCGYC 1 cut(s) 1263
AfaI GTAC 6 cut(s) 161, 571, 578, 2007, 2888, 2989
AfeI AGCGCT 1 cut(s) 2239
AfiI CCNNNNNNNGG 4 cut(s) 838, 1537, 1866, 3029
AflII CTTAAG 1 cut(s) 2393
AhlI ACTAGT 4 cut(s) 355, 1427, 1955, 3001
AjnI CCWGG 1 cut(s) 837
AjuI GAANNNNNNNTTGG 2 cut(s) 992, 1024
AleI CACNNNNGTG 1 cut(s) 1846
Alw21I GWGCWC 3 cut(s) 40, 1085, 1435
Alw26I GTCTC 5 cut(s) 309, 1760, 2403, 2667, 2850
AlwI GGATC 2 cut(s) 2505, 2816
AlwNI CAGNNNCTG 1 cut(s) 2291
Ama87I CYCGRG 1 cut(s) 1865
Aor51HI AGCGCT 1 cut(s) 2239
AoxI GGCC 9 cut(s) 682, 820, 856, 1422, 1850, 2584, 2623, 3357, 3400
ApoI RAATTY 3 cut(s) 2864, 2926, 3218
ArsI GACNNNNNNTTYG 6 cut(s) 232, 264, 687, 719, 3011, 3043
AseI ATTAAT 1 cut(s) 2096
Asp700I GAANNNNTTC 1 cut(s) 1798
Asp718I GGTACC 1 cut(s) 2886
AspLEI GCGC 2 cut(s) 2091, 2240
AspS9I GGNCC 2 cut(s) 4, 2966
AsuC2I CCSGG 2 cut(s) 139, 3522
AsuHPI GGTGA 8 cut(s) 242, 386, 524, 565, 659, 1625, 1642, 2899
AsuII TTCGAA 1 cut(s) 1011
AvaI CYCGRG 1 cut(s) 1865
AvaII GGWCC 2 cut(s) 4, 2966
BalI TGGCCA 1 cut(s) 822
BanI GGYRCC 1 cut(s) 2886
BanII GRGCYC 1 cut(s) 40
BauI CACGAG 1 cut(s) 2448
BbsI GAAGAC 2 cut(s) 1113, 1266
Bbv12I GWGCWC 3 cut(s) 40, 1085, 1435
BbvCI CCTCAGC 1 cut(s) 2493
BccI CCATC 8 cut(s) 15, 997, 1136, 1167, 1183, 2056, 3041, 3319
BcgI CGANNNNNNTGC 2 cut(s) 227, 261
BciT130I CCWGG 1 cut(s) 839
BciVI GTATCC 2 cut(s) 53, 1534
BclI TGATCA 1 cut(s) 1774
BcnI CCSGG 2 cut(s) 139, 3522
BcoDI GTCTC 5 cut(s) 309, 1760, 2403, 2667, 2850
BcuI ACTAGT 4 cut(s) 355, 1427, 1955, 3001
BfmI CTRYAG 1 cut(s) 1230
BfoI RGCGCY 1 cut(s) 2241
BfrI CTTAAG 1 cut(s) 2393
BfuAI ACCTGC 3 cut(s) 1630, 1723, 2003
BfuI GTATCC 2 cut(s) 53, 1534
BglI GCCNNNNNGGC 1 cut(s) 3241
BlpI GCTNAGC 2 cut(s) 114, 2379
BmcAI AGTACT 1 cut(s) 2989
Bme1390I CCNGG 3 cut(s) 139, 839, 3522
Bme18I GGWCC 2 cut(s) 4, 2966
BmeT110I CYCGRG 1 cut(s) 1865
BmgT120I GGNCC 2 cut(s) 4, 2966
BmiI GGNNCC 4 cut(s) 450, 475, 2888, 3517
BmrFI CCNGG 3 cut(s) 139, 839, 3522
BmrI ACTGGG 1 cut(s) 1059
BmsI GCATC 7 cut(s) 221, 337, 355, 419, 1429, 2645, 3179
BmuI ACTGGG 1 cut(s) 1059
BpiI GAAGAC 2 cut(s) 1113, 1266
BpmI CTGGAG 2 cut(s) 1371, 2727
Bpu10I CCTNAGC 4 cut(s) 439, 666, 1019, 2493
Bpu1102I GCTNAGC 2 cut(s) 114, 2379
Bpu14I TTCGAA 1 cut(s) 1011
BpuMI CCSGG 2 cut(s) 139, 3522
Bsa29I ATCGAT 1 cut(s) 3314
BsaAI YACGTR 1 cut(s) 3443
BsaBI GATNNNNATC 2 cut(s) 409, 1725
BsaHI GRCGYC 1 cut(s) 1263
BsaJI CCNNGG 4 cut(s) 46, 1095, 1915, 3520
BsaWI WCCGGW 1 cut(s) 2570
Bsc4I CCNNNNNNNGG 4 cut(s) 838, 1537, 1866, 3029
Bse1I ACTGG 6 cut(s) 232, 1065, 1476, 1602, 2194, 3372
Bse3DI GCAATG 4 cut(s) 716, 1723, 2373, 2718
Bse8I GATNNNNATC 2 cut(s) 409, 1725
BseBI CCWGG 1 cut(s) 839
BseCI ATCGAT 1 cut(s) 3314
BseDI CCNNGG 4 cut(s) 46, 1095, 1915, 3520
BseGI GGATG 7 cut(s) 93, 134, 1147, 1242, 1279, 1423, 3170
BseJI GATNNNNATC 2 cut(s) 409, 1725
BseLI CCNNNNNNNGG 4 cut(s) 838, 1537, 1866, 3029
BseMI GCAATG 4 cut(s) 716, 1723, 2373, 2718
BseNI ACTGG 6 cut(s) 232, 1065, 1476, 1602, 2194, 3372
BseRI GAGGAG 3 cut(s) 898, 1893, 2868
BsgI GTGCAG 4 cut(s) 39, 2288, 2877, 3272
Bsh1236I CGCG 2 cut(s) 223, 1533
BshFI GGCC 9 cut(s) 684, 822, 858, 1424, 1852, 2586, 2625, 3359, 3402
BshNI GGYRCC 1 cut(s) 2886
BshVI ATCGAT 1 cut(s) 3314
BsiHKAI GWGCWC 3 cut(s) 40, 1085, 1435
BsiHKCI CYCGRG 1 cut(s) 1865
BsiSI CCGG 3 cut(s) 139, 2571, 3522
BslFI GGGAC 2 cut(s) 684, 1047
BslI CCNNNNNNNGG 4 cut(s) 838, 1537, 1866, 3029
BsmAI GTCTC 5 cut(s) 309, 1760, 2403, 2667, 2850
BsmFI GGGAC 2 cut(s) 684, 1047
BsmI GAATGC 2 cut(s) 2603, 3237
BsnI GGCC 9 cut(s) 684, 822, 858, 1424, 1852, 2586, 2625, 3359, 3402
BsoBI CYCGRG 1 cut(s) 1865
Bsp119I TTCGAA 1 cut(s) 1011
Bsp1286I GDGCHC 3 cut(s) 40, 1085, 1435
Bsp143I GATC 5 cut(s) 165, 1278, 1774, 2497, 2821
Bsp1720I GCTNAGC 2 cut(s) 114, 2379
Bsp19I CCATGG 2 cut(s) 46, 1095
BspACI CCGC 4 cut(s) 418, 1531, 2071, 2878
BspANI GGCC 9 cut(s) 684, 822, 858, 1424, 1852, 2586, 2625, 3359, 3402
BspDI ATCGAT 1 cut(s) 3314
BspFNI CGCG 2 cut(s) 223, 1533
BspHI TCATGA 3 cut(s) 754, 879, 2679
BspLI GGNNCC 4 cut(s) 450, 475, 2888, 3517
BspMI ACCTGC 3 cut(s) 1630, 1723, 2003
BspPI GGATC 2 cut(s) 2505, 2816
BspT104I TTCGAA 1 cut(s) 1011
BspT107I GGYRCC 1 cut(s) 2886
BspTI CTTAAG 1 cut(s) 2393
BsrBI CCGCTC 1 cut(s) 2071
BsrDI GCAATG 4 cut(s) 716, 1723, 2373, 2718
BsrI ACTGG 6 cut(s) 232, 1065, 1476, 1602, 2194, 3372
BssECI CCNNGG 4 cut(s) 46, 1095, 1915, 3520
BssMI GATC 5 cut(s) 165, 1278, 1774, 2497, 2821
BssNAI GTATAC 1 cut(s) 2789
BssNI GRCGYC 1 cut(s) 1263
BssSI CACGAG 1 cut(s) 2448
BssT1I CCWWGG 3 cut(s) 46, 1095, 1915
Bst1107I GTATAC 1 cut(s) 2789
Bst2BI CACGAG 1 cut(s) 2448
Bst2UI CCWGG 1 cut(s) 839
Bst6I CTCTTC 1 cut(s) 543
BstACI GRCGYC 1 cut(s) 1263
BstAFI CTTAAG 1 cut(s) 2393
BstAPI GCANNNNNTGC 6 cut(s) 1220, 1697, 1946, 2291, 3209, 3341
BstBAI YACGTR 1 cut(s) 3443
BstBI TTCGAA 1 cut(s) 1011
BstC8I GCNNGC 8 cut(s) 663, 736, 1039, 1467, 1637, 1702, 2121, 3117
BstDSI CCRYGG 2 cut(s) 46, 1095
BstF5I GGATG 7 cut(s) 93, 134, 1147, 1242, 1279, 1423, 3170
BstFNI CGCG 2 cut(s) 223, 1533
BstH2I RGCGCY 1 cut(s) 2241
BstHHI GCGC 2 cut(s) 2091, 2240
BstKTI GATC 5 cut(s) 168, 1281, 1777, 2500, 2824
BstMAI GTCTC 5 cut(s) 309, 1760, 2403, 2667, 2850
BstMBI GATC 5 cut(s) 165, 1278, 1774, 2497, 2821
BstNI CCWGG 1 cut(s) 839
BstSCI CCNGG 3 cut(s) 137, 837, 3520
BstSFI CTRYAG 1 cut(s) 1230
BstUI CGCG 2 cut(s) 223, 1533
BstV2I GAAGAC 2 cut(s) 1113, 1266
BstXI CCANNNNNNTGG 1 cut(s) 3415
BstZ17I GTATAC 1 cut(s) 2789
Bsu15I ATCGAT 1 cut(s) 3314
BsuI GTATCC 2 cut(s) 53, 1534
BsuRI GGCC 9 cut(s) 684, 822, 858, 1424, 1852, 2586, 2625, 3359, 3402
BsuTUI ATCGAT 1 cut(s) 3314
BtgI CCRYGG 2 cut(s) 46, 1095
BtgZI GCGATG 1 cut(s) 1548
BtsCI GGATG 7 cut(s) 93, 134, 1147, 1242, 1279, 1423, 3170
BtsI GCAGTG 1 cut(s) 2706
BveI ACCTGC 3 cut(s) 1630, 1723, 2003
Cac8I GCNNGC 8 cut(s) 663, 736, 1039, 1467, 1637, 1702, 2121, 3117
CaiI CAGNNNCTG 1 cut(s) 2291
CciI TCATGA 3 cut(s) 754, 879, 2679
CfoI GCGC 2 cut(s) 2091, 2240
Cfr13I GGNCC 2 cut(s) 4, 2966
ClaI ATCGAT 1 cut(s) 3314
CseI GACGC 3 cut(s) 229, 1271, 3455
Csp6I GTAC 6 cut(s) 160, 570, 577, 2006, 2887, 2988
CviQI GTAC 6 cut(s) 160, 570, 577, 2006, 2887, 2988
DpnI GATC 5 cut(s) 167, 1280, 1776, 2499, 2823
DpnII GATC 5 cut(s) 165, 1278, 1774, 2497, 2821
EaeI YGGCCR 1 cut(s) 820
Eam1104I CTCTTC 1 cut(s) 543
EarI CTCTTC 1 cut(s) 543
Ecl136II GAGCTC 1 cut(s) 38
Eco130I CCWWGG 3 cut(s) 46, 1095, 1915
Eco147I AGGCCT 1 cut(s) 684
Eco24I GRGCYC 1 cut(s) 40
Eco32I GATATC 4 cut(s) 2505, 2848, 2905, 3058
Eco47I GGWCC 2 cut(s) 4, 2966
Eco47III AGCGCT 1 cut(s) 2239
Eco53kI GAGCTC 1 cut(s) 38
Eco57I CTGAAG 8 cut(s) 327, 549, 567, 1107, 2495, 2505, 3258, 3266
Eco88I CYCGRG 1 cut(s) 1865
EcoICRI GAGCTC 1 cut(s) 38
EcoRI GAATTC 2 cut(s) 2864, 3218
EcoRII CCWGG 1 cut(s) 837
EcoRV GATATC 4 cut(s) 2505, 2848, 2905, 3058
EcoT14I CCWWGG 3 cut(s) 46, 1095, 1915
EcoT22I ATGCAT 1 cut(s) 2638
EcoT38I GRGCYC 1 cut(s) 40
ErhI CCWWGG 3 cut(s) 46, 1095, 1915
FalI AAGNNNNNCTT 6 cut(s) 645, 677, 1783, 1815, 2538, 2570
FaqI GGGAC 2 cut(s) 684, 1047
FauNDI CATATG 2 cut(s) 108, 691
FbaI TGATCA 1 cut(s) 1774
FblI GTMKAC 1 cut(s) 2788
FokI GGATG 7 cut(s) 100, 121, 1154, 1229, 1286, 1430, 3157
FriOI GRGCYC 1 cut(s) 40
GlaI GCGC 2 cut(s) 2090, 2239
GsuI CTGGAG 2 cut(s) 1371, 2727
HaeII RGCGCY 1 cut(s) 2241
HaeIII GGCC 9 cut(s) 684, 822, 858, 1424, 1852, 2586, 2625, 3359, 3402
HapII CCGG 3 cut(s) 139, 2571, 3522
HgaI GACGC 3 cut(s) 229, 1271, 3455
HhaI GCGC 2 cut(s) 2091, 2240
Hin1I GRCGYC 1 cut(s) 1263
Hin6I GCGC 2 cut(s) 2089, 2238
HinP1I GCGC 2 cut(s) 2089, 2238
HincII GTYRAC 3 cut(s) 1981, 2940, 3435
HindII GTYRAC 3 cut(s) 1981, 2940, 3435
HindIII AAGCTT 2 cut(s) 496, 1702
HinfI GANTC 7 cut(s) 95, 565, 893, 899, 1445, 2108, 2950
HpaI GTTAAC 1 cut(s) 1981
HpaII CCGG 3 cut(s) 139, 2571, 3522
HphI GGTGA 8 cut(s) 242, 386, 524, 565, 659, 1625, 1642, 2899
Hpy166II GTNNAC 8 cut(s) 577, 1184, 1981, 2195, 2789, 2940, 2978, 3435
Hpy8I GTNNAC 8 cut(s) 577, 1184, 1981, 2195, 2789, 2940, 2978, 3435
HpyAV CCTTC 6 cut(s) 277, 2317, 2926, 3233, 3241, 3392
HpyCH4IV ACGT 2 cut(s) 1660, 3442
HpySE526I ACGT 2 cut(s) 1660, 3442
Hsp92I GRCGYC 1 cut(s) 1263
HspAI GCGC 2 cut(s) 2089, 2238
KpnI GGTACC 1 cut(s) 2890
Ksp22I TGATCA 1 cut(s) 1774
KspAI GTTAAC 1 cut(s) 1981
Kzo9I GATC 5 cut(s) 165, 1278, 1774, 2497, 2821
LmnI GCTCC 7 cut(s) 35, 473, 1906, 1954, 2068, 2366, 2746
LweI GCATC 7 cut(s) 221, 337, 355, 419, 1429, 2645, 3179
MaeII ACGT 2 cut(s) 1660, 3442
MaeIII GTNAC 9 cut(s) 374, 621, 1127, 1485, 2287, 2561, 2704, 2760, 3443
MalI GATC 5 cut(s) 167, 1280, 1776, 2499, 2823
MbiI CCGCTC 1 cut(s) 2071
MboI GATC 5 cut(s) 165, 1278, 1774, 2497, 2821
MboII GAAGA 8 cut(s) 257, 560, 895, 1113, 1271, 1791, 2546, 3100
MfeI CAATTG 6 cut(s) 254, 603, 1166, 1374, 2262, 2457
MhlI GDGCHC 3 cut(s) 40, 1085, 1435
MlsI TGGCCA 1 cut(s) 822
MluNI TGGCCA 1 cut(s) 822
MlyI GAGTC 1 cut(s) 2959
MmeI TCCRAC 3 cut(s) 1119, 1976, 3327
Mox20I TGGCCA 1 cut(s) 822
Mph1103I ATGCAT 1 cut(s) 2638
MroXI GAANNNNTTC 1 cut(s) 1798
MscI TGGCCA 1 cut(s) 822
MslI CAYNNNNRTG 7 cut(s) 488, 884, 1816, 1846, 2060, 2711, 2817
Msp20I TGGCCA 1 cut(s) 822
MspA1I CMGCKG 3 cut(s) 2333, 3277, 3508
MspCI CTTAAG 1 cut(s) 2393
MspI CCGG 3 cut(s) 139, 2571, 3522
MspR9I CCNGG 3 cut(s) 139, 839, 3522
MunI CAATTG 6 cut(s) 254, 603, 1166, 1374, 2262, 2457
Mva1269I GAATGC 2 cut(s) 2603, 3237
MvaI CCWGG 1 cut(s) 839
MvnI CGCG 2 cut(s) 223, 1533
NciI CCSGG 2 cut(s) 139, 3522
NcoI CCATGG 2 cut(s) 46, 1095
NdeI CATATG 2 cut(s) 108, 691
NdeII GATC 5 cut(s) 165, 1278, 1774, 2497, 2821
NlaIV GGNNCC 4 cut(s) 450, 475, 2888, 3517
NmeAIII GCCGAG 3 cut(s) 884, 2601, 3385
NmuCI GTSAC 7 cut(s) 374, 621, 1485, 2561, 2704, 2760, 3443
NsiI ATGCAT 1 cut(s) 2638
NspV TTCGAA 1 cut(s) 1011
OliI CACNNNNGTG 1 cut(s) 1846
PagI TCATGA 3 cut(s) 754, 879, 2679
PceI AGGCCT 1 cut(s) 684
PctI GAATGC 2 cut(s) 2603, 3237
PdmI GAANNNNTTC 1 cut(s) 1798
PfeI GAWTC 6 cut(s) 95, 565, 893, 899, 1445, 2108
PfoI TCCNGGA 1 cut(s) 137
PleI GAGTC 1 cut(s) 2958
PpsI GAGTC 1 cut(s) 2958
Ppu21I YACGTR 1 cut(s) 3443
PshBI ATTAAT 1 cut(s) 2096
Psp124BI GAGCTC 1 cut(s) 40
Psp1406I AACGTT 1 cut(s) 1660
Psp6I CCWGG 1 cut(s) 837
PspGI CCWGG 1 cut(s) 837
PspN4I GGNNCC 4 cut(s) 450, 475, 2888, 3517
PspPI GGNCC 2 cut(s) 4, 2966
PstNI CAGNNNCTG 1 cut(s) 2291
PvuII CAGCTG 3 cut(s) 2333, 3277, 3508
RsaI GTAC 6 cut(s) 161, 571, 578, 2007, 2888, 2989
RsaNI GTAC 6 cut(s) 160, 570, 577, 2006, 2887, 2988
RseI CAYNNNNRTG 7 cut(s) 488, 884, 1816, 1846, 2060, 2711, 2817
SacI GAGCTC 1 cut(s) 40
Sau3AI GATC 5 cut(s) 165, 1278, 1774, 2497, 2821
Sau96I GGNCC 2 cut(s) 4, 2966
ScaI AGTACT 1 cut(s) 2989
SchI GAGTC 1 cut(s) 2959
ScrFI CCNGG 3 cut(s) 139, 839, 3522
SduI GDGCHC 3 cut(s) 40, 1085, 1435
SfaNI GCATC 7 cut(s) 221, 337, 355, 419, 1429, 2645, 3179
SfcI CTRYAG 1 cut(s) 1230
SfuI TTCGAA 1 cut(s) 1011
SinI GGWCC 2 cut(s) 4, 2966
SmiMI CAYNNNNRTG 7 cut(s) 488, 884, 1816, 1846, 2060, 2711, 2817
SmlI CTYRAG 1 cut(s) 2393
SmoI CTYRAG 1 cut(s) 2393
SpeI ACTAGT 4 cut(s) 355, 1427, 1955, 3001
SseBI AGGCCT 1 cut(s) 684
SsiI CCGC 4 cut(s) 418, 1531, 2071, 2878
SspI AATATT 1 cut(s) 1407
SstI GAGCTC 1 cut(s) 40
StuI AGGCCT 1 cut(s) 684
StyD4I CCNGG 3 cut(s) 137, 837, 3520
StyI CCWWGG 3 cut(s) 46, 1095, 1915
TaiI ACGT 2 cut(s) 1663, 3445
TaqI TCGA 6 cut(s) 300, 1011, 1028, 1708, 2557, 3314
TaqII GACCGA 1 cut(s) 2954
TatI WGTACW 4 cut(s) 159, 576, 2005, 2987
TauI GCSGC 2 cut(s) 421, 2074
TfiI GAWTC 6 cut(s) 95, 565, 893, 899, 1445, 2108
TseFI GTSAC 7 cut(s) 374, 621, 1485, 2561, 2704, 2760, 3443
Tsp45I GTSAC 7 cut(s) 374, 621, 1485, 2561, 2704, 2760, 3443
TspDTI ATGAA 7 cut(s) 373, 896, 1800, 2696, 3211, 3231, 3345
TspGWI ACGGA 1 cut(s) 2995
Vha464I CTTAAG 1 cut(s) 2393
VpaK11BI GGWCC 2 cut(s) 4, 2966
VspI ATTAAT 1 cut(s) 2096
XapI RAATTY 3 cut(s) 2864, 2926, 3218
XbaI TCTAGA 2 cut(s) 3382, 3550
XcmI CCANNNNNNNNNTGG 2 cut(s) 1093, 2833
XmiI GTMKAC 1 cut(s) 2788
XmnI GAANNNNTTC 1 cut(s) 1798
ZrmI AGTACT 1 cut(s) 2989
Zsp2I ATGCAT 1 cut(s) 2638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.