Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0001951

Physical Location & Seq

Genomic Coordinates Reverse (-)

673603 .. 676113

Gene Structure 2511 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g00880.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2292 bp

ATGGAAGCCGCTAAAGCTGCAAATGCACATTCTTTCATTGAAGGATTGCCTGATGGCTACAACACTCAGGCAGGAGAAGGAGGAACTCAGCTTTCCGGAGGGCAAAAGCAGCGAATAGCTATTGCAAGAGCAGTGCTGCGAAACCCAAAAATACTACTTTTAGATGAGGCCACAAGCGCTCTTGATGCAGAATCAGAACTTATCGTTCAGCAGGCACTAGAGAAAATCATGTTGCATCGAACTACAGTCATCGTTGCTCATCGGTTGTCCACTATCCGGGATGTGGACACAATCATTGTCTTGAAGAACGGTCAGGTTGCGGAGAGTGGCAACCATTCAGACTTGATGTCCAAGAAAGGGGAGTATGCAAATCTGGTGAGCTTGCAGGTACTGGAACATGTTAAAGATTCTGGCTTAGTATCTGGACATTCTTCGAGAGAATCCAGCTTTCGCGATACCACGAGTAACTATCCGCAGGAGGACAAGGCAACCACAACAAAACAGCAGAAGCCAAGTGATCAAAACAGCTCTGCATCAGTGTGGGAATTAGTGAAACTAAATGCGCCCGAGTGGCCTTATGCGATTCTCGGGTCAGTTGGTGCAGTTCTGGCCGGCATGGAAGCTCCTCTTTTCGCCCTTGGAATAACTCACATCTTGACAGCGTTTTACGGTCCTAGTGGCTCTCAAATCAAACATGATGTTGATAGGATAGCTCTCATATTTGTTGGCTTGGCTGCTTTTACTGTCCCAATATATCTCCTGCAGCACTACTTTTATACATTGATGGGGGAGCGGCTCACAACTCGCGTACGCTTATTAATGTTCAAAGCTATCCTTTCAAACGAAGTTGGTTGGTTTGATTTGGATGAGAATAACACTGGAGCACTGACTTCAACTTTAGCAGCAAACGCAACATTAGTGCGAAGCGCTCTAGCTGACCGTCTATCAACAATCGTGCAGAATCTTGCACTCACGGTGACTGCTTTCGCTATTGCCTTCACCTTAAGTTGGCGTATTGCAGCTGTCGTGAGTGCCTCCCTCCCTCTACTTATCGGAGCTTCCATAACTGAGCAACTGTTTCTGAAGGGATTCGGAGGAGACTACAACCTTGCCTACTCAAAAGCAACATCCGTGGCACGTGAAGCAATTGCCAACATACGTACTGTTGCTGCATTTGGTTGCGAAGAACGGATATCACTCCAGTTTTCCTTGGAACTAAACAAGCCAAACAAGCAAGCAGTTCTAAGAGGCCACATATCAGGTTTCTGCTACGGTTTATCGCAGTTTTTCGCATTCTGTTCTTATGCGCTTGGCCTTTGGTATGCATCAGTACTAATCAAGGATAAAGACTCGAATTTCGGAGACATCATCAAGTCCTTTATGGTCCTAATAGTCACGTCACTGAGTATAGCAGAAACCCTAGCTCTCACGCCAGAAATTATGAAGGGATCGCAAGTGCTCGGCCCAATTTTCAGTATCCTAAAGCGAGAAACGGCCATACATCGTAATGATCCCAGATCAAATGTTGTTGCTAATGTCAAAGGAGATATAGAGTTCAAGAATGTGAGTTTCTGGTACCCTGCAAGGCCGGATATCACCATTTTCGACCATTTGAATTTACGTGTTTCAGCAGGAAAGAGCCTTGCAGTAGTCGGGCCAAGTGGTTCTGGGAAGAGTACAGTGATTGCACTGGTAATGAGATTTTATGACCCTGTTTCTGGTACGGTTCTAATTGATAGATACGATATCAAAAGCTTGAACTTGAAATCGTTGAGGAAGAGAATAAGTCTAGTTCAACAAGAGCCGGCATTGTTCTCCACAACAATTTATGAGAACATAAAGTATGGGCACGAGGAAGCATCGGAAGTAGAGGTAGTGACAGCGGCAAAAGCAGCGAATGCACACAGTTTCATAAGTCGAATGCCTGAAGGGTACAAAACTCAAGTGGGAGAGAAAGGAGTGCAGTTATCGGGAGGGCAGAAACAGAGGGTGGCAATTGCCAGAGCAATACTGAAAGATCCGTCGATTCTTCTTCTGGACGAAGCAACCAGTGCATTGGACACAGAGTCTGAGAAGCTGGTCCAAGAGGCTCTTGATAAGCTAATGGAGGGCCGAACAACAATCTTGGTAGCACACCGGTTGTCAACTATTCGTGATGCTAACCGTATTGCCCTGCTACAAAATGGTAGGGTGGCCGAAATGGGAAGCCACGAGCAGCTGATTGGAAGACCTGGTAGTCTCTACAAACAATTAGTTAGTCTACAGCAACAAAAGAGACAAGCGATTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

764

Amino Acids

83.17

Weight (kDa)

8.58

Isoelectric Point (pI)

32.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001951)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27940 AT1G27940 AT1G28010
fragaria_vesca	FvH4_2g38200 FvH4_2g38200 FvH4_2g38200 FvH4_2g38200 FvH4_2g38200 FvH4_2g38200 FvH4_2g38200 FvH4_2g38200 FvH4_2g38200
malus_domestica	MD08G1010400.v1.1 MD15G1010500.v1.1
prunus_persica	Prupe.1G363000_v2.0.a1
pyrus_communis	pycom08g00880 pycom15g00870
rosa_chinensis	RchiOBHm_Chr6g0303191 RchiOBHm_Chr6g0303201 RchiOBHm_Chr6g0303231 RchiOBHm_Chr6g0303261 RchiOBHm_Chr6g0303271 RchiOBHm_Chr6g0303281
rosa_laevigata	RLG00000011096 RLG00000011098
rosa_multiflora	Rmu_sc0007252.1_g000003 Rmu_sc0007252.1_g000004 Rmu_sc0036924.1_g000002
rosa_roxburghii	Rroxscaffold_7G00164910
rosa_rugosa	Rorug06G0319800 Rorug06G0319800 Rorug06G0319900 Rorug06G0319900
rosa_samantha	Rh6AG433700 Rh6AG433900 Rh6AG434300 Rh6AG434400 Rh6BG468700 Rh6BG468800 Rh6BG468900 Rh6CG446200 Rh6CG446400 Rh6DG433000 Rh6DG433100
rosa_wichuraiana	Rw6G037610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2235
Acc36I	ACCTGC	1 cut(s)	376
Acc65I	GGTACC	1 cut(s)	1575
AccB1I	GGYRCC	1 cut(s)	1575
AccBSI	CCGCTC	1 cut(s)	793
AccI	GTMKAC	1 cut(s)	2260
AccII	CGCG	2 cut(s)	453, 807
AccIII	TCCGGA	1 cut(s)	95
AciI	CCGC	5 cut(s)	9, 320, 473, 793, 1883
AclWI	GGATC	3 cut(s)	1456, 1505, 2012
AcoI	YGGCCR	3 cut(s)	609, 1494, 2193
AcsI	RAATTY	2 cut(s)	1354, 1615
AcuI	CTGAAG	2 cut(s)	1103, 1947
AcvI	CACGTG	1 cut(s)	1139
AfaI	GTAC	8 cut(s)	390, 810, 1162, 1332, 1577, 1678, 1723, 1934
AfeI	AGCGCT	2 cut(s)	178, 928
AfiI	CCNNNNNNNGG	5 cut(s)	276, 283, 357, 1008, 1718
AflII	CTTAAG	1 cut(s)	1003
AflIII	ACRYGT	2 cut(s)	397, 1621
AgeI	ACCGGT	1 cut(s)	2136
AhdI	GACNNNNNGTC	2 cut(s)	346, 2065
AjiI	CACGTC	1 cut(s)	1398
AjnI	CCWGG	1 cut(s)	2230
Alw21I	GWGCWC	2 cut(s)	886, 1461
Alw26I	GTCTC	4 cut(s)	1092, 1356, 2243, 2269
AlwI	GGATC	3 cut(s)	1456, 1505, 2012
AlwNI	CAGNNNCTG	2 cut(s)	391, 2069
Ama87I	CYCGRG	2 cut(s)	566, 587
Aor13HI	TCCGGA	1 cut(s)	95
Aor51HI	AGCGCT	2 cut(s)	178, 928
ApoI	RAATTY	2 cut(s)	1354, 1615
ArsI	GACNNNNNNTTYG	2 cut(s)	1340, 1372
AseI	ATTAAT	1 cut(s)	818
AsiGI	ACCGGT	1 cut(s)	2136
Asp700I	GAANNNNTTC	1 cut(s)	1088
Asp718I	GGTACC	1 cut(s)	1575
AspLEI	GCGC	4 cut(s)	179, 565, 929, 1309
AspS9I	GGNCC	6 cut(s)	671, 1384, 1463, 1655, 2080, 2110
AsuC2I	CCSGG	1 cut(s)	278
AsuHPI	GGTGA	4 cut(s)	388, 988, 991, 1588
AvaI	CYCGRG	2 cut(s)	566, 587
AvaII	GGWCC	3 cut(s)	671, 1384, 2080
BaeGI	GKGCMC	1 cut(s)	1851
BanI	GGYRCC	1 cut(s)	1575
BauI	CACGAG	3 cut(s)	460, 1850, 2210
BbrPI	CACGTG	1 cut(s)	1139
BbsI	GAAGAC	1 cut(s)	2233
Bbv12I	GWGCWC	2 cut(s)	886, 1461
BccI	CCATC	2 cut(s)	47, 778
BceAI	ACGGC	1 cut(s)	1509
BciT130I	CCWGG	1 cut(s)	2232
BciVI	GTATCC	1 cut(s)	1487
BclI	TGATCA	1 cut(s)	517
BcnI	CCSGG	1 cut(s)	278
BcoDI	GTCTC	4 cut(s)	1092, 1356, 2243, 2269
BfaI	CTAG	5 cut(s)	218, 675, 932, 1421, 1790
BfmI	CTRYAG	3 cut(s)	243, 761, 2261
BfoI	RGCGCY	2 cut(s)	180, 930
BfrI	CTTAAG	1 cut(s)	1003
BfuAI	ACCTGC	1 cut(s)	376
BfuI	GTATCC	1 cut(s)	1487
BglI	GCCNNNNNGGC	1 cut(s)	571
BmcAI	AGTACT	1 cut(s)	1332
Bme1390I	CCNGG	2 cut(s)	278, 2232
Bme18I	GGWCC	3 cut(s)	671, 1384, 2080
BmeRI	GACNNNNNGTC	2 cut(s)	346, 2065
BmeT110I	CYCGRG	2 cut(s)	566, 587
BmgBI	CACGTC	1 cut(s)	1398
BmgT120I	GGNCC	6 cut(s)	671, 1384, 1463, 1655, 2080, 2110
BmiI	GGNNCC	1 cut(s)	1577
BmrFI	CCNGG	2 cut(s)	278, 2232
BmsI	GCATC	6 cut(s)	175, 244, 542, 1334, 1868, 2146
BpiI	GAAGAC	1 cut(s)	2233
BpmI	CTGGAG	2 cut(s)	900, 1184
BpuEI	CTTGAG	1 cut(s)	1926
BpuMI	CCSGG	1 cut(s)	278
BsaAI	YACGTR	3 cut(s)	1139, 1160, 1622
BsaJI	CCNNGG	3 cut(s)	637, 1131, 1209
BsaWI	WCCGGW	2 cut(s)	95, 2136
Bsc4I	CCNNNNNNNGG	5 cut(s)	276, 283, 357, 1008, 1718
Bse118I	RCCGGY	3 cut(s)	611, 1804, 2136
Bse1I	ACTGG	5 cut(s)	396, 883, 1201, 1695, 2049
BseAI	TCCGGA	1 cut(s)	95
BseBI	CCWGG	1 cut(s)	2232
BseDI	CCNNGG	3 cut(s)	637, 1131, 1209
BseGI	GGATG	3 cut(s)	286, 871, 1127
BseLI	CCNNNNNNNGG	5 cut(s)	276, 283, 357, 1008, 1718
BseMII	CTCAG	5 cut(s)	80, 101, 1059, 1394, 2061
BseNI	ACTGG	5 cut(s)	396, 883, 1201, 1695, 2049
BseRI	GAGGAG	2 cut(s)	615, 1110
BseSI	GKGCMC	1 cut(s)	1851
BsgI	GTGCAG	3 cut(s)	621, 977, 1982
Bsh1236I	CGCG	2 cut(s)	453, 807
BshNI	GGYRCC	1 cut(s)	1575
BshTI	ACCGGT	1 cut(s)	2136
BsiHKAI	GWGCWC	2 cut(s)	886, 1461
BsiHKCI	CYCGRG	2 cut(s)	566, 587
BsiSI	CCGG	6 cut(s)	96, 277, 612, 1589, 1805, 2137
BsiWI	CGTACG	1 cut(s)	808
BslFI	GGGAC	1 cut(s)	731
BslI	CCNNNNNNNGG	5 cut(s)	276, 283, 357, 1008, 1718
BsmAI	GTCTC	4 cut(s)	1092, 1356, 2243, 2269
BsmFI	GGGAC	1 cut(s)	731
BsmI	GAATGC	3 cut(s)	1292, 1903, 1926
BsoBI	CYCGRG	2 cut(s)	566, 587
Bsp1286I	GDGCHC	3 cut(s)	886, 1461, 1851
Bsp13I	TCCGGA	1 cut(s)	95
Bsp143I	GATC	5 cut(s)	517, 1448, 1510, 1517, 2017
Bsp68I	TCGCGA	1 cut(s)	453
BspACI	CCGC	5 cut(s)	9, 320, 473, 793, 1883
BspCNI	CTCAG	5 cut(s)	79, 100, 1060, 1395, 2062
BspEI	TCCGGA	1 cut(s)	95
BspFNI	CGCG	2 cut(s)	453, 807
BspLI	GGNNCC	1 cut(s)	1577
BspMAI	CTGCAG	1 cut(s)	765
BspMI	ACCTGC	1 cut(s)	376
BspPI	GGATC	3 cut(s)	1456, 1505, 2012
BspT107I	GGYRCC	1 cut(s)	1575
BspTI	CTTAAG	1 cut(s)	1003
BsrBI	CCGCTC	1 cut(s)	793
BsrFI	RCCGGY	3 cut(s)	611, 1804, 2136
BsrI	ACTGG	5 cut(s)	396, 883, 1201, 1695, 2049
BssAI	RCCGGY	3 cut(s)	611, 1804, 2136
BssECI	CCNNGG	3 cut(s)	637, 1131, 1209
BssMI	GATC	5 cut(s)	517, 1448, 1510, 1517, 2017
BssSI	CACGAG	3 cut(s)	460, 1850, 2210
BssT1I	CCWWGG	2 cut(s)	637, 1209
Bst2BI	CACGAG	3 cut(s)	460, 1850, 2210
Bst2UI	CCWGG	1 cut(s)	2232
Bst6I	CTCTTC	2 cut(s)	1667, 1772
BstAFI	CTTAAG	1 cut(s)	1003
BstAPI	GCANNNNNTGC	2 cut(s)	1898, 2051
BstBAI	YACGTR	3 cut(s)	1139, 1160, 1622
BstC8I	GCNNGC	5 cut(s)	213, 383, 613, 1236, 1806
BstDEI	CTNAG	7 cut(s)	66, 87, 415, 1068, 1244, 1403, 2070
BstDSI	CCRYGG	1 cut(s)	1131
BstF5I	GGATG	3 cut(s)	286, 871, 1127
BstFNI	CGCG	2 cut(s)	453, 807
BstH2I	RGCGCY	2 cut(s)	180, 930
BstHHI	GCGC	4 cut(s)	179, 565, 929, 1309
BstKTI	GATC	5 cut(s)	520, 1451, 1513, 1520, 2020
BstMAI	GTCTC	4 cut(s)	1092, 1356, 2243, 2269
BstMBI	GATC	5 cut(s)	517, 1448, 1510, 1517, 2017
BstNI	CCWGG	1 cut(s)	2232
BstNSI	RCATGY	1 cut(s)	401
BstSCI	CCNGG	2 cut(s)	276, 2230
BstSFI	CTRYAG	3 cut(s)	243, 761, 2261
BstSLI	GKGCMC	1 cut(s)	1851
BstSNI	TACGTA	1 cut(s)	1160
BstUI	CGCG	2 cut(s)	453, 807
BstV2I	GAAGAC	1 cut(s)	2233
BstX2I	RGATCY	1 cut(s)	2017
BstXI	CCANNNNNNTGG	1 cut(s)	2056
BstYI	RGATCY	1 cut(s)	2017
BsuI	GTATCC	1 cut(s)	1487
BtgI	CCRYGG	1 cut(s)	1131
BtrI	CACGTC	1 cut(s)	1398
BtsCI	GGATG	3 cut(s)	286, 871, 1127
BtsI	GCAGTG	1 cut(s)	138
BtsIMutI	CAGTG	8 cut(s)	138, 543, 876, 884, 1400, 1686, 1688, 2056
BtuMI	TCGCGA	1 cut(s)	453
BveI	ACCTGC	1 cut(s)	376
Cac8I	GCNNGC	5 cut(s)	213, 383, 613, 1236, 1806
CaiI	CAGNNNCTG	2 cut(s)	391, 2069
CfoI	GCGC	4 cut(s)	179, 565, 929, 1309
Cfr10I	RCCGGY	3 cut(s)	611, 1804, 2136
Cfr13I	GGNCC	6 cut(s)	671, 1384, 1463, 1655, 2080, 2110
CsiI	ACCWGGT	1 cut(s)	2230
Csp6I	GTAC	8 cut(s)	389, 809, 1161, 1331, 1576, 1677, 1722, 1933
CspAI	ACCGGT	1 cut(s)	2136
CspCI	CAANNNNNGTGG	2 cut(s)	1113, 1148
CviAII	CATG	4 cut(s)	229, 398, 616, 695
CviQI	GTAC	8 cut(s)	389, 809, 1161, 1331, 1576, 1677, 1722, 1933
DdeI	CTNAG	7 cut(s)	66, 87, 415, 1068, 1244, 1403, 2070
DpnI	GATC	5 cut(s)	519, 1450, 1512, 1519, 2019
DpnII	GATC	5 cut(s)	517, 1448, 1510, 1517, 2017
DrdI	GACNNNNNNGTC	1 cut(s)	2235
DriI	GACNNNNNGTC	2 cut(s)	346, 2065
DseDI	GACNNNNNNGTC	1 cut(s)	2235
EaeI	YGGCCR	3 cut(s)	609, 1494, 2193
Eam1104I	CTCTTC	2 cut(s)	1667, 1772
Eam1105I	GACNNNNNGTC	2 cut(s)	346, 2065
EarI	CTCTTC	2 cut(s)	1667, 1772
Eco105I	TACGTA	1 cut(s)	1160
Eco130I	CCWWGG	2 cut(s)	637, 1209
Eco32I	GATATC	3 cut(s)	1194, 1594, 1747
Eco47I	GGWCC	3 cut(s)	671, 1384, 2080
Eco47III	AGCGCT	2 cut(s)	178, 928
Eco57I	CTGAAG	2 cut(s)	1103, 1947
Eco72I	CACGTG	1 cut(s)	1139
Eco88I	CYCGRG	2 cut(s)	566, 587
EcoRII	CCWGG	1 cut(s)	2230
EcoRV	GATATC	3 cut(s)	1194, 1594, 1747
EcoT14I	CCWWGG	2 cut(s)	637, 1209
EcoT22I	ATGCAT	1 cut(s)	1327
ErhI	CCWWGG	2 cut(s)	637, 1209
FaeI	CATG	4 cut(s)	232, 401, 619, 698
FalI	AAGNNNNNCTT	6 cut(s)	612, 644, 819, 851, 2076, 2108
FaqI	GGGAC	1 cut(s)	731
FatI	CATG	4 cut(s)	228, 397, 615, 694
FbaI	TGATCA	1 cut(s)	517
FblI	GTMKAC	1 cut(s)	2260
FokI	GGATG	3 cut(s)	293, 878, 1114
FspBI	CTAG	5 cut(s)	218, 675, 932, 1421, 1790
GlaI	GCGC	4 cut(s)	178, 564, 928, 1308
GsuI	CTGGAG	2 cut(s)	900, 1184
HaeII	RGCGCY	2 cut(s)	180, 930
HapII	CCGG	6 cut(s)	96, 277, 612, 1589, 1805, 2137
HhaI	GCGC	4 cut(s)	179, 565, 929, 1309
Hin1II	CATG	4 cut(s)	232, 401, 619, 698
Hin6I	GCGC	4 cut(s)	177, 563, 927, 1307
HinP1I	GCGC	4 cut(s)	177, 563, 927, 1307
HincII	GTYRAC	1 cut(s)	2145
HindII	GTYRAC	1 cut(s)	2145
HindIII	AAGCTT	1 cut(s)	1753
HinfI	GANTC	9 cut(s)	191, 407, 440, 583, 961, 1089, 1349, 2026, 2066
HpaII	CCGG	6 cut(s)	96, 277, 612, 1589, 1805, 2137
HphI	GGTGA	4 cut(s)	388, 988, 991, 1588
Hpy166II	GTNNAC	4 cut(s)	270, 286, 2145, 2261
Hpy188I	TCNGA	8 cut(s)	196, 340, 1055, 1083, 1094, 1361, 1864, 2071
Hpy8I	GTNNAC	4 cut(s)	270, 286, 2145, 2261
Hpy99I	CGWCG	1 cut(s)	2026
HpyAV	CCTTC	6 cut(s)	35, 71, 1006, 1078, 1438, 1922
HpyCH4IV	ACGT	4 cut(s)	1138, 1159, 1397, 1621
HpyF3I	CTNAG	7 cut(s)	66, 87, 415, 1068, 1244, 1403, 2070
HpySE526I	ACGT	4 cut(s)	1138, 1159, 1397, 1621
Hsp92II	CATG	4 cut(s)	232, 401, 619, 698
HspAI	GCGC	4 cut(s)	177, 563, 927, 1307
Kpn2I	TCCGGA	1 cut(s)	95
KpnI	GGTACC	1 cut(s)	1579
KroI	GCCGGC	2 cut(s)	611, 1804
KroNI	GCCGGC	2 cut(s)	613, 1806
Ksp22I	TGATCA	1 cut(s)	517
Kzo9I	GATC	5 cut(s)	517, 1448, 1510, 1517, 2017
LmnI	GCTCC	4 cut(s)	628, 790, 881, 1055
LweI	GCATC	6 cut(s)	175, 244, 542, 1334, 1868, 2146
MabI	ACCWGGT	1 cut(s)	2230
MaeI	CTAG	5 cut(s)	218, 675, 932, 1421, 1790
MaeII	ACGT	4 cut(s)	1138, 1159, 1397, 1621
MaeIII	GTNAC	5 cut(s)	464, 976, 1393, 1398, 1876
MalI	GATC	5 cut(s)	519, 1450, 1512, 1519, 2019
MbiI	CCGCTC	1 cut(s)	793
MboI	GATC	5 cut(s)	517, 1448, 1510, 1517, 2017
MboII	GAAGA	8 cut(s)	316, 423, 1196, 1684, 1789, 2021, 2024, 2238
MfeI	CAATTG	2 cut(s)	1146, 1995
MflI	RGATCY	1 cut(s)	2017
MhlI	GDGCHC	3 cut(s)	886, 1461, 1851
MlyI	GAGTC	2 cut(s)	1343, 2075
Mph1103I	ATGCAT	1 cut(s)	1327
MroI	TCCGGA	1 cut(s)	95
MroNI	GCCGGC	2 cut(s)	611, 1804
MroXI	GAANNNNTTC	1 cut(s)	1088
MseI	TTAA	4 cut(s)	402, 818, 1004, 2290
MslI	CAYNNNNRTG	2 cut(s)	538, 1506
MspA1I	CMGCKG	3 cut(s)	1022, 1883, 2218
MspCI	CTTAAG	1 cut(s)	1003
MspI	CCGG	6 cut(s)	96, 277, 612, 1589, 1805, 2137
MspR9I	CCNGG	2 cut(s)	278, 2232
MunI	CAATTG	2 cut(s)	1146, 1995
Mva1269I	GAATGC	3 cut(s)	1292, 1903, 1926
MvaI	CCWGG	1 cut(s)	2232
MvnI	CGCG	2 cut(s)	453, 807
NaeI	GCCGGC	2 cut(s)	613, 1806
NciI	CCSGG	1 cut(s)	278
NdeII	GATC	5 cut(s)	517, 1448, 1510, 1517, 2017
NgoMIV	GCCGGC	2 cut(s)	611, 1804
NlaIII	CATG	4 cut(s)	232, 401, 619, 698
NlaIV	GGNNCC	1 cut(s)	1577
NmeAIII	GCCGAG	1 cut(s)	1440
NmuCI	GTSAC	4 cut(s)	976, 1393, 1398, 1876
NruI	TCGCGA	1 cut(s)	453
NsiI	ATGCAT	1 cut(s)	1327
NspI	RCATGY	1 cut(s)	401
PciI	ACATGT	1 cut(s)	397
PctI	GAATGC	3 cut(s)	1292, 1903, 1926
PdiI	GCCGGC	2 cut(s)	613, 1806
PdmI	GAANNNNTTC	1 cut(s)	1088
PfeI	GAWTC	7 cut(s)	191, 407, 440, 583, 961, 1089, 2026
Pfl23II	CGTACG	1 cut(s)	808
PfoI	TCCNGGA	1 cut(s)	276
PinAI	ACCGGT	1 cut(s)	2136
PleI	GAGTC	2 cut(s)	1343, 2074
PmaCI	CACGTG	1 cut(s)	1139
PmlI	CACGTG	1 cut(s)	1139
PpsI	GAGTC	2 cut(s)	1343, 2074
Ppu21I	YACGTR	3 cut(s)	1139, 1160, 1622
PscI	ACATGT	1 cut(s)	397
PshBI	ATTAAT	1 cut(s)	818
Psp6I	CCWGG	1 cut(s)	2230
PspCI	CACGTG	1 cut(s)	1139
PspGI	CCWGG	1 cut(s)	2230
PspLI	CGTACG	1 cut(s)	808
PspN4I	GGNNCC	1 cut(s)	1577
PspPI	GGNCC	6 cut(s)	671, 1384, 1463, 1655, 2080, 2110
PstI	CTGCAG	1 cut(s)	765
PstNI	CAGNNNCTG	2 cut(s)	391, 2069
PsuI	RGATCY	1 cut(s)	2017
PvuII	CAGCTG	2 cut(s)	1022, 2218
RruI	TCGCGA	1 cut(s)	453
RsaI	GTAC	8 cut(s)	390, 810, 1162, 1332, 1577, 1678, 1723, 1934
RsaNI	GTAC	8 cut(s)	389, 809, 1161, 1331, 1576, 1677, 1722, 1933
RseI	CAYNNNNRTG	2 cut(s)	538, 1506
SaqAI	TTAA	4 cut(s)	402, 818, 1004, 2290
Sau3AI	GATC	5 cut(s)	517, 1448, 1510, 1517, 2017
Sau96I	GGNCC	6 cut(s)	671, 1384, 1463, 1655, 2080, 2110
ScaI	AGTACT	1 cut(s)	1332
SchI	GAGTC	2 cut(s)	1343, 2075
ScrFI	CCNGG	2 cut(s)	278, 2232
SduI	GDGCHC	3 cut(s)	886, 1461, 1851
SexAI	ACCWGGT	1 cut(s)	2230
SfaNI	GCATC	6 cut(s)	175, 244, 542, 1334, 1868, 2146
SfcI	CTRYAG	3 cut(s)	243, 761, 2261
SinI	GGWCC	3 cut(s)	671, 1384, 2080
SmiMI	CAYNNNNRTG	2 cut(s)	538, 1506
SmlI	CTYRAG	2 cut(s)	1003, 1941
SmoI	CTYRAG	2 cut(s)	1003, 1941
SnaBI	TACGTA	1 cut(s)	1160
SsiI	CCGC	5 cut(s)	9, 320, 473, 793, 1883
SspMI	CTAG	5 cut(s)	218, 675, 932, 1421, 1790
StyD4I	CCNGG	2 cut(s)	276, 2230
StyI	CCWWGG	2 cut(s)	637, 1209
TaiI	ACGT	4 cut(s)	1141, 1162, 1400, 1624
TaqI	TCGA	6 cut(s)	238, 434, 1352, 1605, 1918, 2024
TatI	WGTACW	2 cut(s)	1330, 1676
TauI	GCSGC	3 cut(s)	11, 796, 1886
TfiI	GAWTC	7 cut(s)	191, 407, 440, 583, 961, 1089, 2026
Tru1I	TTAA	4 cut(s)	402, 818, 1004, 2290
Tru9I	TTAA	4 cut(s)	402, 818, 1004, 2290
TscAI	CASTG	8 cut(s)	138, 543, 883, 891, 1407, 1686, 1695, 2056
TseFI	GTSAC	4 cut(s)	976, 1393, 1398, 1876
Tsp45I	GTSAC	4 cut(s)	976, 1393, 1398, 1876
TspDTI	ATGAA	3 cut(s)	25, 1457, 1900
TspGWI	ACGGA	3 cut(s)	1120, 1204, 2010
TspRI	CASTG	8 cut(s)	138, 543, 883, 891, 1407, 1686, 1695, 2056
Vha464I	CTTAAG	1 cut(s)	1003
VpaK11BI	GGWCC	3 cut(s)	671, 1384, 2080
VspI	ATTAAT	1 cut(s)	818
XapI	RAATTY	2 cut(s)	1354, 1615
XceI	RCATGY	1 cut(s)	401
XmiI	GTMKAC	1 cut(s)	2260
XmnI	GAANNNNTTC	1 cut(s)	1088
XspI	CTAG	5 cut(s)	218, 675, 932, 1421, 1790
ZrmI	AGTACT	1 cut(s)	1332
Zsp2I	ATGCAT	1 cut(s)	1327

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.