Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001596

Physical Location & Seq

Genomic Coordinates Forward (+)

28291698 .. 28293008

Gene Structure 1311 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G75390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 522 bp

ATGAATAATAAAACTGAAATGGGATCTTCCACAAGTGGAAATTGCTCGTCGGTTTCAACCACTGGTTTAGCTAACTCCGGTTCAGAATCTGATCTCCGGCAACGTGATCTAATCGACGAGCGGAAGAGAAAGAGGAAACAGTCGAACAGAGAATCTGCGAGGAGGTCGAGGATGAGGAAGCAGAAGCATTTGGATGATCTCACTGCTCAGGTGACTCATCTACGTAAAGAAAACGCTCAGATCGTCGCCGGAATCGCCGTCACGACGCAGCACTACGTCACTATCGAGGCGGAGAACGACATTCTCAGAGCTCAGGTTCTTGAACTTAACCACCGTCTCCAATCTCTTAACGAGATCGTTGATTTCGTCGAATCTTCTTCTTCAGGATTCGGTATGGAGACCGGTCAGGGATTATTCGACGGTGGATTATTCGACGGCGTGATGAATCCTATGAATCTAGGGTTTTATAATCAACCAATCATGGCTTCTGCTTCTACTGCTGGTGATGTTTTCAACTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006417 GO:0006950 GO:0007275 GO:0008150 GO:0009743 GO:0009744 GO:0009791 GO:0009845 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0017148 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032055 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0033554 GO:0034248 GO:0034249 GO:0034285 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043555 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046982 GO:0046983 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:0080149 GO:0090351 GO:0097159 GO:0140110 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

173

Amino Acids

19.07

Weight (kDa)

6.42

Isoelectric Point (pI)

51.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bZIP_2	PF07716	39 - 83	1.2e-07	Basic region leucine zipper
bZIP_1	PF00170	41 - 81	1.4e-09	bZIP transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001596)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75390 AT1G75390
fragaria_vesca	FvH4_1g12620 FvH4_2g09540 FvH4_2g39350
malus_domestica	MD02G1140600.v1.1 MD05G1062200.v1.1 MD08G1025800.v1.1 MD10G1069900.v1.1 MD15G1022500.v1.1 MD15G1253800.v1.1
prunus_persica	Prupe.1G374400_v2.0.a1 Prupe.7G160600_v2.0.a1 Prupe.8G091600_v2.0.a1
pyrus_communis	pycom02g11070 pycom05g05360 pycom08g01980 pycom10g05550 pycom15g01880 pycom15g22300
rosa_chinensis	RchiOBHm_Chr2g0100571 RchiOBHm_Chr6g0265831 RchiOBHm_Chr6g0301661
rosa_laevigata	RLG00000011235 RLG00000014155 RLG00000016986
rosa_multiflora	Rmu_co8174844.1_g000001 Rmu_sc0000468.1_g000014 Rmu_sc0000528.1_g000006 Rmu_sc0000528.1_g000007 Rmu_sc0023062.1_g000002
rosa_roxburghii	Rroxscaffold_7G00166560 Rroxscaffold_7G00202340
rosa_rugosa	Rorug02G0089600 Rorug06G0020000 Rorug06G0307700
rosa_samantha	Rh2AG138700 Rh2BG142100 Rh2CG144400 Rh2DG143800 Rh6AG142200 Rh6AG420500 Rh6BG142100 Rh6BG426900 Rh6CG138700 Rh6CG433600 Rh6DG125900
rosa_wichuraiana	Rw2G010870 Rw6G012280 Rw6G036360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	468
AccBSI	CCGCTC	1 cut(s)	121
AciI	CCGC	2 cut(s)	121, 290
AclWI	GGATC	1 cut(s)	31
AcuI	CTGAAG	1 cut(s)	366
AgeI	ACCGGT	1 cut(s)	401
AgsI	TTSAA	3 cut(s)	57, 323, 514
AjuI	GAANNNNNNNTTGG	2 cut(s)	469, 501
AluBI	AGCT	2 cut(s)	71, 311
AluI	AGCT	2 cut(s)	71, 311
Alw21I	GWGCWC	1 cut(s)	313
Alw26I	GTCTC	2 cut(s)	341, 392
AlwI	GGATC	1 cut(s)	31
AlwNI	CAGNNNCTG	1 cut(s)	89
ApeKI	GCWGC	1 cut(s)	268
AsiGI	ACCGGT	1 cut(s)	401
AsuHPI	GGTGA	2 cut(s)	223, 515
BanII	GRGCYC	1 cut(s)	313
Bbv12I	GWGCWC	1 cut(s)	313
BbvI	GCAGC	1 cut(s)	280
BceAI	ACGGC	2 cut(s)	242, 451
BcoDI	GTCTC	2 cut(s)	341, 392
BfaI	CTAG	1 cut(s)	458
BisI	GCNGC	1 cut(s)	269
BlsI	GCNGC	1 cut(s)	270
Bpu10I	CCTNAGC	2 cut(s)	207, 312
BsaAI	YACGTR	1 cut(s)	224
BsaI	GGTCTC	1 cut(s)	392
BsaWI	WCCGGW	2 cut(s)	77, 401
Bse118I	RCCGGY	1 cut(s)	401
Bse1I	ACTGG	1 cut(s)	67
BseGI	GGATG	2 cut(s)	177, 199
BseMII	CTCAG	4 cut(s)	221, 251, 319, 326
BseNI	ACTGG	1 cut(s)	67
BseRI	GAGGAG	1 cut(s)	175
BseXI	GCAGC	1 cut(s)	280
BshTI	ACCGGT	1 cut(s)	401
BsiHKAI	GWGCWC	1 cut(s)	313
BsiSI	CCGG	4 cut(s)	78, 97, 249, 402
BsmAI	GTCTC	2 cut(s)	341, 392
BsmBI	CGTCTC	1 cut(s)	341
Bso31I	GGTCTC	1 cut(s)	392
Bsp1286I	GDGCHC	1 cut(s)	313
Bsp143I	GATC	6 cut(s)	23, 91, 106, 196, 240, 354
BspACI	CCGC	2 cut(s)	121, 290
BspCNI	CTCAG	4 cut(s)	220, 250, 318, 325
BspPI	GGATC	1 cut(s)	31
BspTNI	GGTCTC	1 cut(s)	392
BsrBI	CCGCTC	1 cut(s)	121
BsrFI	RCCGGY	1 cut(s)	401
BsrI	ACTGG	1 cut(s)	67
BssAI	RCCGGY	1 cut(s)	401
BssMI	GATC	6 cut(s)	23, 91, 106, 196, 240, 354
Bst4CI	ACNGT	4 cut(s)	141, 335, 422, 518
Bst6I	CTCTTC	1 cut(s)	119
BstBAI	YACGTR	1 cut(s)	224
BstDEI	CTNAG	4 cut(s)	207, 237, 305, 312
BstF5I	GGATG	2 cut(s)	177, 199
BstKTI	GATC	6 cut(s)	26, 94, 109, 199, 243, 357
BstMAI	GTCTC	2 cut(s)	341, 392
BstMBI	GATC	6 cut(s)	23, 91, 106, 196, 240, 354
BstMWI	GCNNNNNNNGC	2 cut(s)	254, 497
BstSNI	TACGTA	1 cut(s)	224
BstV1I	GCAGC	1 cut(s)	280
BstX2I	RGATCY	1 cut(s)	23
BstYI	RGATCY	1 cut(s)	23
BtsCI	GGATG	2 cut(s)	177, 199
BtsI	GCAGTG	1 cut(s)	201
BtsIMutI	CAGTG	2 cut(s)	60, 201
CaiI	CAGNNNCTG	1 cut(s)	89
Cfr10I	RCCGGY	1 cut(s)	401
CseI	GACGC	1 cut(s)	274
CspAI	ACCGGT	1 cut(s)	401
CviAII	CATG	1 cut(s)	481
CviJI	RGCY	3 cut(s)	71, 311, 485
CviKI_1	RGCY	3 cut(s)	71, 311, 485
DdeI	CTNAG	4 cut(s)	207, 237, 305, 312
DpnI	GATC	6 cut(s)	25, 93, 108, 198, 242, 356
DpnII	GATC	6 cut(s)	23, 91, 106, 196, 240, 354
Eam1104I	CTCTTC	1 cut(s)	119
EarI	CTCTTC	1 cut(s)	119
EciI	GGCGGA	1 cut(s)	305
Ecl136II	GAGCTC	1 cut(s)	311
Eco105I	TACGTA	1 cut(s)	224
Eco24I	GRGCYC	1 cut(s)	313
Eco31I	GGTCTC	1 cut(s)	392
Eco53kI	GAGCTC	1 cut(s)	311
Eco57I	CTGAAG	1 cut(s)	366
EcoICRI	GAGCTC	1 cut(s)	311
EcoT38I	GRGCYC	1 cut(s)	313
Esp3I	CGTCTC	1 cut(s)	341
FaeI	CATG	1 cut(s)	484
FaiI	YATR	4 cut(s)	395, 452, 468, 482
FatI	CATG	1 cut(s)	480
Fnu4HI	GCNGC	1 cut(s)	269
FokI	GGATG	2 cut(s)	184, 206
FriOI	GRGCYC	1 cut(s)	313
Fsp4HI	GCNGC	1 cut(s)	269
FspBI	CTAG	1 cut(s)	458
GluI	GCNGC	1 cut(s)	269
HapII	CCGG	4 cut(s)	78, 97, 249, 402
HgaI	GACGC	1 cut(s)	274
Hin1II	CATG	1 cut(s)	484
HinfI	GANTC	8 cut(s)	86, 152, 214, 252, 371, 387, 445, 454
HpaII	CCGG	4 cut(s)	78, 97, 249, 402
HphI	GGTGA	2 cut(s)	223, 515
Hpy188I	TCNGA	4 cut(s)	85, 91, 240, 308
Hpy188III	TCNNGA	3 cut(s)	262, 320, 384
Hpy99I	CGWCG	7 cut(s)	52, 119, 248, 268, 371, 422, 437
HpyCH4III	ACNGT	4 cut(s)	141, 335, 422, 518
HpyCH4IV	ACGT	3 cut(s)	103, 223, 276
HpyF10VI	GCNNNNNNNGC	2 cut(s)	254, 497
HpyF3I	CTNAG	4 cut(s)	207, 237, 305, 312
HpySE526I	ACGT	3 cut(s)	103, 223, 276
Hsp92II	CATG	1 cut(s)	484
Kzo9I	GATC	6 cut(s)	23, 91, 106, 196, 240, 354
Lsp1109I	GCAGC	1 cut(s)	280
MaeI	CTAG	1 cut(s)	458
MaeII	ACGT	3 cut(s)	103, 223, 276
MaeIII	GTNAC	3 cut(s)	211, 259, 277
MalI	GATC	6 cut(s)	25, 93, 108, 198, 242, 356
MbiI	CCGCTC	1 cut(s)	121
MboI	GATC	6 cut(s)	23, 91, 106, 196, 240, 354
MboII	GAAGA	5 cut(s)	18, 136, 366, 369, 372
MflI	RGATCY	1 cut(s)	23
MhlI	GDGCHC	1 cut(s)	313
MluCI	AATT	1 cut(s)	40
MlyI	GAGTC	1 cut(s)	208
MnlI	CCTC	6 cut(s)	126, 153, 156, 162, 168, 280
MseI	TTAA	2 cut(s)	327, 348
MslI	CAYNNNNRTG	1 cut(s)	192
MspI	CCGG	4 cut(s)	78, 97, 249, 402
MwoI	GCNNNNNNNGC	2 cut(s)	254, 497
NdeII	GATC	6 cut(s)	23, 91, 106, 196, 240, 354
NlaIII	CATG	1 cut(s)	484
NmuCI	GTSAC	3 cut(s)	211, 259, 277
PcsI	WCGNNNNNNNCGW	3 cut(s)	240, 282, 363
PfeI	GAWTC	7 cut(s)	86, 152, 252, 371, 387, 445, 454
PinAI	ACCGGT	1 cut(s)	401
PkrI	GCNGC	1 cut(s)	270
PleI	GAGTC	1 cut(s)	208
PpsI	GAGTC	1 cut(s)	208
Ppu21I	YACGTR	1 cut(s)	224
PsiI	TTATAA	1 cut(s)	468
Psp124BI	GAGCTC	1 cut(s)	313
PstNI	CAGNNNCTG	1 cut(s)	89
PsuI	RGATCY	1 cut(s)	23
RseI	CAYNNNNRTG	1 cut(s)	192
SacI	GAGCTC	1 cut(s)	313
SaqAI	TTAA	2 cut(s)	327, 348
SatI	GCNGC	1 cut(s)	269
Sau3AI	GATC	6 cut(s)	23, 91, 106, 196, 240, 354
SchI	GAGTC	1 cut(s)	208
SduI	GDGCHC	1 cut(s)	313
SetI	ASST	8 cut(s)	73, 106, 167, 213, 226, 279, 313, 318
SmiMI	CAYNNNNRTG	1 cut(s)	192
SnaBI	TACGTA	1 cut(s)	224
Sse9I	AATT	1 cut(s)	40
SsiI	CCGC	2 cut(s)	121, 290
SspMI	CTAG	1 cut(s)	458
SstI	GAGCTC	1 cut(s)	313
TaaI	ACNGT	4 cut(s)	141, 335, 422, 518
TaiI	ACGT	3 cut(s)	106, 226, 279
TaqI	TCGA	7 cut(s)	114, 143, 167, 285, 369, 417, 432
TasI	AATT	1 cut(s)	40
TfiI	GAWTC	7 cut(s)	86, 152, 252, 371, 387, 445, 454
Tru1I	TTAA	2 cut(s)	327, 348
Tru9I	TTAA	2 cut(s)	327, 348
TscAI	CASTG	2 cut(s)	67, 208
TseFI	GTSAC	3 cut(s)	211, 259, 277
TseI	GCWGC	1 cut(s)	268
Tsp45I	GTSAC	3 cut(s)	211, 259, 277
TspDTI	ATGAA	3 cut(s)	17, 458, 467
TspRI	CASTG	2 cut(s)	67, 208
XspI	CTAG	1 cut(s)	458

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.