Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001596

Physical Location & Seq

Genomic Coordinates Reverse (-)

2534545 .. 2537112

Gene Structure 2568 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0020000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGGCTATCTATTTTCTCCTCTCGTTTTTGCTTCTAATTTGCATTCTATCATATGGCTCACAAAAACTCACAGCCAAAAGGCTCAAAATCACAATCGAAGAAGCTACTGTTGATGATCTCCAGCTTGCTTTCAGGCTCAAGACTCTGACCTCAAGGGAAGTTGTCCTGTTCTACCTGGACAAGATTCGAGAACTGAACAAAAACCTTAGGGGTGTCATAGAGGTGAACCCTGATGCGTTATCCCAAGCTGATATAGCTGACAAAGAACGCAGAGAATGCAACCACACACTGCCTAAGCTTCATGGCATTCCTATTCTGCTAAAGGATAACATAGCAACCAAGGACAAACTCAACACCACAGCTGGCTCGTTTGCCTTGTTGGGATCCATTGTGCCTCGAGATGCAGGTGTTGTTTCTAAGCTAAGGAGGTCTGGAGCTATCATTTTAGGGAAGGCTAGCTTGAGTGAATGGAGCAACTTTAGAACATCATGGGCACCCAACGGTTGGAGCGCCAGAGGTTCCCAAGGAAAGAATCCTTACAATTCATCGGTGGAAGTTTGTGGATCAAGTAGTGGACCTGCAATATCAGTAGCTGCTAATATGGTTTCTGTGACACTAGGAACGGAGACTGACGGCTCCATTATCTGTCCGGCTAGCTTTAACTCAGTAGTTGGCATCAAACCGACTGTTGGTCTCACTAGTCGAGCTGGAGTCATACCAATCAGTCCAAGACAGGACACAGTTGGGCCGATTTGTAGGACTGTAGCGGATGCTGTTCACGTCCTTGATATCATTGTTGGCATTGATAGGAATGACAATGCGACAAGTGAAGCATCAAAGTACATCCCAGTGGGAGGCTATGGACAGTTTCTCAAGCATAATGGCCTCGAAGGAAAGAGATTGGGGATAGTAAATATGTTATTTGATTCAATCAAGGACGATGCTTTTCTGAAACAAACTTTTGAGCAGCATTTTACCACACTGAGGAAACAGGGGGCAGTTTTGGTTGACAATCTTGAAATAGCCCATATTGAAGATGTTCTGGATTCTCATTCAAGTGGAGAATTTGATGCAATGTTAGCTGAATTCAAAATAGCCTTGAATGAGTACCTAAGTGACCTAGTAAAATCTCCAGTGAAGTCCTTAAGGGAGGTGATAGAGTTCAACAAGAATCATTCAAAGGAGGAAAAGATCAATGAATATGGGCAAGATATCTTCGAATTAGCTGAGAAGACTAATGGGATGGGACCAAAAGAGCAGGAGGCATTGTCAAATTTAAAAAGACTATCTATACAGGGGTTCAAGAAGTTGATGACCGATCATAGCCTAGATGCCTTGGTGGCTTATGCTAACAGTGCTTCTTCTATCCTCGCAATTGGTGGTTTTCCAGGCATTGTTGTGCCGGCAGGATATCATAACACTAAAAAGTATCCTTTTGGGATCTGCTTTGGGGGACTCAAGGGTTCAGAGCCAAAGCTGATTGAGATCGCCTATGCCTTCGAGCAAGCAACTAAGATAAGGAGAAAACCTCCTCTAGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006417 GO:0006950 GO:0008150 GO:0009743 GO:0009744 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0017148 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032055 GO:0032268 GO:0032269 GO:0033554 GO:0034248 GO:0034249 GO:0034285 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043555 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046982 GO:0046983 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:0080149 GO:0097159 GO:0140110 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

513

Amino Acids

55.89

Weight (kDa)

8.51

Isoelectric Point (pI)

36.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Amidase	PF01425	53 - 447	2.1e-68	Amidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001596)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75390 AT1G75390
fragaria_vesca	FvH4_1g12620 FvH4_2g09540 FvH4_2g39350
malus_domestica	MD02G1140600.v1.1 MD05G1062200.v1.1 MD08G1025800.v1.1 MD10G1069900.v1.1 MD15G1022500.v1.1 MD15G1253800.v1.1
prunus_persica	Prupe.1G374400_v2.0.a1 Prupe.7G160600_v2.0.a1 Prupe.8G091600_v2.0.a1
pyrus_communis	pycom02g11070 pycom05g05360 pycom08g01980 pycom10g05550 pycom15g01880 pycom15g22300
rosa_chinensis	RchiOBHm_Chr2g0100571 RchiOBHm_Chr6g0265831 RchiOBHm_Chr6g0301661
rosa_laevigata	RLG00000011235 RLG00000014155 RLG00000016986
rosa_multiflora	Rmu_co8174844.1_g000001 Rmu_sc0000468.1_g000014 Rmu_sc0000528.1_g000006 Rmu_sc0000528.1_g000007 Rmu_sc0023062.1_g000002
rosa_roxburghii	Rroxscaffold_7G00166560 Rroxscaffold_7G00202340
rosa_rugosa	Rorug02G0089600 Rorug06G0020000 Rorug06G0307700
rosa_samantha	Rh2AG138700 Rh2BG142100 Rh2CG144400 Rh2DG143800 Rh6AG142200 Rh6AG420500 Rh6BG142100 Rh6BG426900 Rh6CG138700 Rh6CG433600 Rh6DG125900
rosa_wichuraiana	Rw2G010870 Rw6G012280 Rw6G036360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	395
Acc36I	ACCTGC	2 cut(s)	395, 586
AccB1I	GGYRCC	1 cut(s)	493
AccB7I	CCANNNNNTGG	1 cut(s)	504
AciI	CCGC	1 cut(s)	767
AclWI	GGATC	4 cut(s)	378, 391, 571, 1448
AcsI	RAATTY	3 cut(s)	1064, 1085, 1273
AfaI	GTAC	2 cut(s)	842, 1109
AfiI	CCNNNNNNNGG	4 cut(s)	504, 689, 854, 984
AflII	CTTAAG	1 cut(s)	1144
AgsI	TTSAA	9 cut(s)	930, 1019, 1034, 1056, 1090, 1102, 1165, 1179, 1303
AhdI	GACNNNNNGTC	1 cut(s)	690
AhlI	ACTAGT	1 cut(s)	698
AjiI	CACGTC	1 cut(s)	781
AjnI	CCWGG	2 cut(s)	174, 1387
Alw26I	GTCTC	2 cut(s)	620, 698
AlwI	GGATC	4 cut(s)	378, 391, 571, 1448
AlwNI	CAGNNNCTG	1 cut(s)	593
Ama87I	CYCGRG	1 cut(s)	396
AoxI	GGCC	2 cut(s)	746, 883
ApeKI	GCWGC	2 cut(s)	593, 967
ApoI	RAATTY	3 cut(s)	1064, 1085, 1273
Asp700I	GAANNNNTTC	1 cut(s)	1038
AspLEI	GCGC	1 cut(s)	512
AspS9I	GGNCC	3 cut(s)	575, 746, 1247
AsuHPI	GGTGA	2 cut(s)	235, 1165
AsuII	TTCGAA	1 cut(s)	1218
AsuNHI	GCTAGC	2 cut(s)	455, 653
AvaI	CYCGRG	1 cut(s)	396
AvaII	GGWCC	2 cut(s)	575, 1247
AxyI	CCTNAGG	1 cut(s)	206
BaeGI	GKGCMC	1 cut(s)	496
BamHI	GGATCC	1 cut(s)	383
BanI	GGYRCC	1 cut(s)	493
BbsI	GAAGAC	1 cut(s)	1238
BbvI	GCAGC	2 cut(s)	580, 979
BccI	CCATC	1 cut(s)	1237
BceAI	ACGGC	1 cut(s)	649
BciT130I	CCWGG	2 cut(s)	176, 1389
BciVI	GTATCC	1 cut(s)	1440
BcoDI	GTCTC	2 cut(s)	620, 698
BcuI	ACTAGT	1 cut(s)	698
BfaI	CTAG	7 cut(s)	456, 617, 654, 699, 1121, 1328, 1535
BfmI	CTRYAG	1 cut(s)	762
BfoI	RGCGCY	1 cut(s)	513
BfrI	CTTAAG	1 cut(s)	1144
BfuAI	ACCTGC	2 cut(s)	395, 586
BfuI	GTATCC	1 cut(s)	1440
BglI	GCCNNNNNGGC	1 cut(s)	1340
BisI	GCNGC	2 cut(s)	594, 968
BlsI	GCNGC	2 cut(s)	595, 969
Bme1390I	CCNGG	2 cut(s)	176, 1389
Bme18I	GGWCC	2 cut(s)	575, 1247
BmeRI	GACNNNNNGTC	1 cut(s)	690
BmeT110I	CYCGRG	1 cut(s)	396
BmgBI	CACGTC	1 cut(s)	781
BmgT120I	GGNCC	3 cut(s)	575, 746, 1247
BmiI	GGNNCC	5 cut(s)	385, 495, 520, 637, 1248
BmrFI	CCNGG	2 cut(s)	176, 1389
BmrI	ACTGGG	1 cut(s)	842
BmsI	GCATC	8 cut(s)	223, 391, 684, 760, 842, 931, 1060, 1321
BmtI	GCTAGC	2 cut(s)	459, 657
BmuI	ACTGGG	1 cut(s)	842
BpiI	GAAGAC	1 cut(s)	1238
BplI	GAGNNNNNCTC	1 cut(s)	1513
BpmI	CTGGAG	4 cut(s)	104, 453, 729, 1116
Bpu10I	CCTNAGC	2 cut(s)	294, 422
Bpu14I	TTCGAA	1 cut(s)	1218
BpuEI	CTTGAG	5 cut(s)	122, 136, 481, 857, 1442
BsaBI	GATNNNNATC	1 cut(s)	1484
BsaI	GGTCTC	1 cut(s)	698
BsaJI	CCNNGG	3 cut(s)	339, 523, 1335
BsaXI	ACNNNNNCTCC	2 cut(s)	1253, 1283
Bsc4I	CCNNNNNNNGG	4 cut(s)	504, 689, 854, 984
Bse118I	RCCGGY	1 cut(s)	1402
Bse1I	ACTGG	2 cut(s)	848, 1133
Bse21I	CCTNAGG	1 cut(s)	206
Bse3DI	GCAATG	1 cut(s)	1080
Bse8I	GATNNNNATC	1 cut(s)	1484
BseBI	CCWGG	2 cut(s)	176, 1389
BseDI	CCNNGG	3 cut(s)	339, 523, 1335
BseGI	GGATG	3 cut(s)	775, 843, 1248
BseJI	GATNNNNATC	1 cut(s)	1484
BseLI	CCNNNNNNNGG	4 cut(s)	504, 689, 854, 984
BseMI	GCAATG	1 cut(s)	1080
BseMII	CTCAG	3 cut(s)	678, 974, 1218
BseNI	ACTGG	2 cut(s)	848, 1133
BseRI	GAGGAG	2 cut(s)	8, 1521
BseSI	GKGCMC	1 cut(s)	496
BseXI	GCAGC	2 cut(s)	580, 979
BshFI	GGCC	2 cut(s)	748, 885
BshNI	GGYRCC	1 cut(s)	493
BsiHKCI	CYCGRG	1 cut(s)	396
BsiSI	CCGG	2 cut(s)	650, 1403
BslFI	GGGAC	2 cut(s)	1260, 1467
BslI	CCNNNNNNNGG	4 cut(s)	504, 689, 854, 984
BsmAI	GTCTC	2 cut(s)	620, 698
BsmFI	GGGAC	2 cut(s)	1260, 1467
BsmI	GAATGC	3 cut(s)	42, 281, 306
BsnI	GGCC	2 cut(s)	748, 885
Bso31I	GGTCTC	1 cut(s)	698
BsoBI	CYCGRG	1 cut(s)	396
Bsp119I	TTCGAA	1 cut(s)	1218
Bsp1286I	GDGCHC	1 cut(s)	496
Bsp143I	GATC	7 cut(s)	115, 383, 563, 1191, 1318, 1440, 1485
BspACI	CCGC	1 cut(s)	767
BspANI	GGCC	2 cut(s)	748, 885
BspCNI	CTCAG	3 cut(s)	677, 975, 1219
BspLI	GGNNCC	5 cut(s)	385, 495, 520, 637, 1248
BspMI	ACCTGC	2 cut(s)	395, 586
BspOI	GCTAGC	2 cut(s)	459, 657
BspPI	GGATC	4 cut(s)	378, 391, 571, 1448
BspT104I	TTCGAA	1 cut(s)	1218
BspT107I	GGYRCC	1 cut(s)	493
BspTI	CTTAAG	1 cut(s)	1144
BspTNI	GGTCTC	1 cut(s)	698
BsrDI	GCAATG	1 cut(s)	1080
BsrFI	RCCGGY	1 cut(s)	1402
BsrI	ACTGG	2 cut(s)	848, 1133
BssAI	RCCGGY	1 cut(s)	1402
BssECI	CCNNGG	3 cut(s)	339, 523, 1335
BssMI	GATC	7 cut(s)	115, 383, 563, 1191, 1318, 1440, 1485
BssT1I	CCWWGG	3 cut(s)	339, 523, 1335
Bst2UI	CCWGG	2 cut(s)	176, 1389
Bst4CI	ACNGT	7 cut(s)	109, 503, 688, 742, 763, 867, 1355
BstAFI	CTTAAG	1 cut(s)	1144
BstAPI	GCANNNNNTGC	1 cut(s)	276
BstBI	TTCGAA	1 cut(s)	1218
BstC8I	GCNNGC	6 cut(s)	126, 364, 457, 655, 1404, 1506
BstDEI	CTNAG	9 cut(s)	206, 294, 417, 422, 664, 983, 1112, 1227, 1512
BstF5I	GGATG	3 cut(s)	775, 843, 1248
BstH2I	RGCGCY	1 cut(s)	513
BstHHI	GCGC	1 cut(s)	512
BstKTI	GATC	7 cut(s)	118, 386, 566, 1194, 1321, 1443, 1488
BstMAI	GTCTC	2 cut(s)	620, 698
BstMBI	GATC	7 cut(s)	115, 383, 563, 1191, 1318, 1440, 1485
BstMWI	GCNNNNNNNGC	5 cut(s)	254, 276, 1079, 1340, 1355
BstNI	CCWGG	2 cut(s)	176, 1389
BstSCI	CCNGG	2 cut(s)	174, 1387
BstSFI	CTRYAG	1 cut(s)	762
BstSLI	GKGCMC	1 cut(s)	496
BstV1I	GCAGC	2 cut(s)	580, 979
BstV2I	GAAGAC	1 cut(s)	1238
BstX2I	RGATCY	2 cut(s)	383, 1440
BstYI	RGATCY	2 cut(s)	383, 1440
Bsu36I	CCTNAGG	1 cut(s)	206
BsuI	GTATCC	1 cut(s)	1440
BsuRI	GGCC	2 cut(s)	748, 885
BtrI	CACGTC	1 cut(s)	781
BtsCI	GGATG	3 cut(s)	775, 843, 1248
BtsI	GCAGTG	1 cut(s)	287
BtsIMutI	CAGTG	5 cut(s)	287, 855, 980, 1140, 1360
BveI	ACCTGC	2 cut(s)	395, 586
Cac8I	GCNNGC	6 cut(s)	126, 364, 457, 655, 1404, 1506
CaiI	CAGNNNCTG	1 cut(s)	593
CfoI	GCGC	1 cut(s)	512
Cfr10I	RCCGGY	1 cut(s)	1402
Cfr13I	GGNCC	3 cut(s)	575, 746, 1247
Csp6I	GTAC	2 cut(s)	841, 1108
CviAII	CATG	2 cut(s)	302, 489
CviQI	GTAC	2 cut(s)	841, 1108
DdeI	CTNAG	9 cut(s)	206, 294, 417, 422, 664, 983, 1112, 1227, 1512
DpnI	GATC	7 cut(s)	117, 385, 565, 1193, 1320, 1442, 1487
DpnII	GATC	7 cut(s)	115, 383, 563, 1191, 1318, 1440, 1485
DraI	TTTAAA	1 cut(s)	1278
DriI	GACNNNNNGTC	1 cut(s)	690
Eam1105I	GACNNNNNGTC	1 cut(s)	690
Eco130I	CCWWGG	3 cut(s)	339, 523, 1335
Eco31I	GGTCTC	1 cut(s)	698
Eco32I	GATATC	3 cut(s)	790, 1213, 1412
Eco47I	GGWCC	2 cut(s)	575, 1247
Eco81I	CCTNAGG	1 cut(s)	206
Eco88I	CYCGRG	1 cut(s)	396
EcoRI	GAATTC	1 cut(s)	1085
EcoRII	CCWGG	2 cut(s)	174, 1387
EcoRV	GATATC	3 cut(s)	790, 1213, 1412
EcoT14I	CCWWGG	3 cut(s)	339, 523, 1335
ErhI	CCWWGG	3 cut(s)	339, 523, 1335
FaeI	CATG	2 cut(s)	305, 492
FalI	AAGNNNNNCTT	2 cut(s)	443, 475
FaqI	GGGAC	2 cut(s)	1260, 1467
FatI	CATG	2 cut(s)	301, 488
FauNDI	CATATG	1 cut(s)	52
Fnu4HI	GCNGC	2 cut(s)	594, 968
FokI	GGATG	3 cut(s)	782, 830, 1255
Fsp4HI	GCNGC	2 cut(s)	594, 968
FspBI	CTAG	7 cut(s)	456, 617, 654, 699, 1121, 1328, 1535
GlaI	GCGC	1 cut(s)	511
GluI	GCNGC	2 cut(s)	594, 968
GsuI	CTGGAG	4 cut(s)	104, 453, 729, 1116
HaeII	RGCGCY	1 cut(s)	513
HaeIII	GGCC	2 cut(s)	748, 885
HapII	CCGG	2 cut(s)	650, 1403
HhaI	GCGC	1 cut(s)	512
Hin1II	CATG	2 cut(s)	305, 492
Hin6I	GCGC	1 cut(s)	510
HinP1I	GCGC	1 cut(s)	510
HincII	GTYRAC	1 cut(s)	1009
HindII	GTYRAC	1 cut(s)	1009
HindIII	AAGCTT	1 cut(s)	296
HinfI	GANTC	8 cut(s)	142, 184, 532, 711, 926, 1046, 1171, 1455
HpaII	CCGG	2 cut(s)	650, 1403
HphI	GGTGA	2 cut(s)	235, 1165
Hpy166II	GTNNAC	4 cut(s)	226, 575, 778, 1009
Hpy188I	TCNGA	3 cut(s)	147, 951, 1468
Hpy188III	TCNNGA	7 cut(s)	139, 188, 398, 432, 1016, 1043, 1303
Hpy8I	GTNNAC	4 cut(s)	226, 575, 778, 1009
HpyAV	CCTTC	3 cut(s)	445, 884, 1507
HpyCH4III	ACNGT	7 cut(s)	109, 503, 688, 742, 763, 867, 1355
HpyCH4IV	ACGT	1 cut(s)	780
HpyCH4V	TGCA	5 cut(s)	42, 279, 404, 581, 1073
HpyF10VI	GCNNNNNNNGC	5 cut(s)	254, 276, 1079, 1340, 1355
HpyF3I	CTNAG	9 cut(s)	206, 294, 417, 422, 664, 983, 1112, 1227, 1512
HpySE526I	ACGT	1 cut(s)	780
Hsp92II	CATG	2 cut(s)	305, 492
HspAI	GCGC	1 cut(s)	510
KroI	GCCGGC	1 cut(s)	1402
KroNI	GCCGGC	1 cut(s)	1404
Kzo9I	GATC	7 cut(s)	115, 383, 563, 1191, 1318, 1440, 1485
LmnI	GCTCC	4 cut(s)	434, 471, 507, 641
Lsp1109I	GCAGC	2 cut(s)	580, 979
LweI	GCATC	8 cut(s)	223, 391, 684, 760, 842, 931, 1060, 1321
MaeI	CTAG	7 cut(s)	456, 617, 654, 699, 1121, 1328, 1535
MaeII	ACGT	1 cut(s)	780
MaeIII	GTNAC	2 cut(s)	610, 1115
MalI	GATC	7 cut(s)	117, 385, 565, 1193, 1320, 1442, 1487
MboI	GATC	7 cut(s)	115, 383, 563, 1191, 1318, 1440, 1485
MboII	GAAGA	5 cut(s)	110, 1046, 1207, 1243, 1353
MfeI	CAATTG	1 cut(s)	1374
MflI	RGATCY	2 cut(s)	383, 1440
MhlI	GDGCHC	1 cut(s)	496
MluCI	AATT	7 cut(s)	36, 541, 1064, 1085, 1220, 1273, 1374
MlyI	GAGTC	3 cut(s)	136, 720, 1449
MmeI	TCCRAC	1 cut(s)	485
MroNI	GCCGGC	1 cut(s)	1402
MroXI	GAANNNNTTC	1 cut(s)	1038
MseI	TTAA	3 cut(s)	660, 1145, 1277
MslI	CAYNNNNRTG	4 cut(s)	221, 848, 1056, 1397
MspA1I	CMGCKG	1 cut(s)	362
MspCI	CTTAAG	1 cut(s)	1144
MspI	CCGG	2 cut(s)	650, 1403
MspR9I	CCNGG	2 cut(s)	176, 1389
MunI	CAATTG	1 cut(s)	1374
Mva1269I	GAATGC	3 cut(s)	42, 281, 306
MvaI	CCWGG	2 cut(s)	176, 1389
MwoI	GCNNNNNNNGC	5 cut(s)	254, 276, 1079, 1340, 1355
NaeI	GCCGGC	1 cut(s)	1404
NdeI	CATATG	1 cut(s)	52
NdeII	GATC	7 cut(s)	115, 383, 563, 1191, 1318, 1440, 1485
NgoMIV	GCCGGC	1 cut(s)	1402
NheI	GCTAGC	2 cut(s)	455, 653
NlaIII	CATG	2 cut(s)	305, 492
NlaIV	GGNNCC	5 cut(s)	385, 495, 520, 637, 1248
NmuCI	GTSAC	2 cut(s)	610, 1115
NspV	TTCGAA	1 cut(s)	1218
PaeR7I	CTCGAG	1 cut(s)	396
PaqCI	CACCTGC	1 cut(s)	395
PctI	GAATGC	3 cut(s)	42, 281, 306
PdiI	GCCGGC	1 cut(s)	1404
PdmI	GAANNNNTTC	1 cut(s)	1038
PfeI	GAWTC	5 cut(s)	184, 532, 926, 1046, 1171
PflMI	CCANNNNNTGG	1 cut(s)	504
PkrI	GCNGC	2 cut(s)	595, 969
PleI	GAGTC	3 cut(s)	136, 719, 1449
PpsI	GAGTC	3 cut(s)	136, 719, 1449
Psp6I	CCWGG	2 cut(s)	174, 1387
PspGI	CCWGG	2 cut(s)	174, 1387
PspN4I	GGNNCC	5 cut(s)	385, 495, 520, 637, 1248
PspPI	GGNCC	3 cut(s)	575, 746, 1247
PstNI	CAGNNNCTG	1 cut(s)	593
PsuI	RGATCY	2 cut(s)	383, 1440
PvuII	CAGCTG	1 cut(s)	362
RsaI	GTAC	2 cut(s)	842, 1109
RsaNI	GTAC	2 cut(s)	841, 1108
RseI	CAYNNNNRTG	4 cut(s)	221, 848, 1056, 1397
SaqAI	TTAA	3 cut(s)	660, 1145, 1277
SatI	GCNGC	2 cut(s)	594, 968
Sau3AI	GATC	7 cut(s)	115, 383, 563, 1191, 1318, 1440, 1485
Sau96I	GGNCC	3 cut(s)	575, 746, 1247
SchI	GAGTC	3 cut(s)	136, 720, 1449
ScrFI	CCNGG	2 cut(s)	176, 1389
SduI	GDGCHC	1 cut(s)	496
SfaNI	GCATC	8 cut(s)	223, 391, 684, 760, 842, 931, 1060, 1321
SfcI	CTRYAG	1 cut(s)	762
Sfr274I	CTCGAG	1 cut(s)	396
SfuI	TTCGAA	1 cut(s)	1218
SinI	GGWCC	2 cut(s)	575, 1247
SlaI	CTCGAG	1 cut(s)	396
SmiMI	CAYNNNNRTG	4 cut(s)	221, 848, 1056, 1397
SmlI	CTYRAG	7 cut(s)	137, 151, 396, 460, 872, 1144, 1457
SmoI	CTYRAG	7 cut(s)	137, 151, 396, 460, 872, 1144, 1457
SpeI	ACTAGT	1 cut(s)	698
Sse9I	AATT	7 cut(s)	36, 541, 1064, 1085, 1220, 1273, 1374
SsiI	CCGC	1 cut(s)	767
SspMI	CTAG	7 cut(s)	456, 617, 654, 699, 1121, 1328, 1535
StyD4I	CCNGG	2 cut(s)	174, 1387
StyI	CCWWGG	3 cut(s)	339, 523, 1335
TaaI	ACNGT	7 cut(s)	109, 503, 688, 742, 763, 867, 1355
TaiI	ACGT	1 cut(s)	783
TaqI	TCGA	7 cut(s)	96, 187, 397, 703, 888, 1218, 1500
TaqII	GACCGA	1 cut(s)	1331
TasI	AATT	7 cut(s)	36, 541, 1064, 1085, 1220, 1273, 1374
TatI	WGTACW	1 cut(s)	840
TfiI	GAWTC	5 cut(s)	184, 532, 926, 1046, 1171
Tru1I	TTAA	3 cut(s)	660, 1145, 1277
Tru9I	TTAA	3 cut(s)	660, 1145, 1277
TscAI	CASTG	5 cut(s)	294, 855, 987, 1140, 1360
TseFI	GTSAC	2 cut(s)	610, 1115
TseI	GCWGC	2 cut(s)	593, 967
Tsp45I	GTSAC	2 cut(s)	610, 1115
TspDTI	ATGAA	3 cut(s)	290, 534, 1212
TspGWI	ACGGA	1 cut(s)	638
TspRI	CASTG	5 cut(s)	294, 855, 987, 1140, 1360
Van91I	CCANNNNNTGG	1 cut(s)	504
Vha464I	CTTAAG	1 cut(s)	1144
VpaK11BI	GGWCC	2 cut(s)	575, 1247
XapI	RAATTY	3 cut(s)	1064, 1085, 1273
XhoI	CTCGAG	1 cut(s)	396
XmnI	GAANNNNTTC	1 cut(s)	1038
XspI	CTAG	7 cut(s)	456, 617, 654, 699, 1121, 1328, 1535

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.