Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001596

Physical Location & Seq

Genomic Coordinates Forward (+)

16687928 .. 16688466

Gene Structure 539 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G160600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 471 bp

ATGGGTTCTTCTAGTGGGGTTTCTTCAGGGTCAAGCATGCTTCAGAACTCAGGCTCTGATGAAGATCTTCATCAGGTCATGGACCAAAGAAAGCGCAAAAGAATGCTATCCAATCGGGAATCGGCACGTAGATCTAGGATGCGCAAACAGGAGCATCTGACCGATCTGACGGCTCAAATTGGTCTTCTGAAGAAGGAGAACCACCAAATCCTCACAAGCATGAATGTGACCAACCAACTCTACATGAACCTTGAGGCAGAGAACTCTGTCCTCAGAGCTCAGATGGATGAGCTCAGCAACAGACTGCAGTCTCTCAATGATATCATAGACTGCATTAACTCAAGCAAATGGCTTTTTGAGGCTGAAGAAGAAGACACTCAGATTATTGGTGGTGATGGATTTCTTAATCCATGGAGCACTCTCTGTTTGAACCAACCAATTATGGCTTCTGCTGACATGTTTATGTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

157

Amino Acids

17.67

Weight (kDa)

5.18

Isoelectric Point (pI)

48.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001596)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75390 AT1G75390
fragaria_vesca	FvH4_1g12620 FvH4_2g09540 FvH4_2g39350
malus_domestica	MD02G1140600.v1.1 MD05G1062200.v1.1 MD08G1025800.v1.1 MD10G1069900.v1.1 MD15G1022500.v1.1 MD15G1253800.v1.1
prunus_persica	Prupe.1G374400_v2.0.a1 Prupe.7G160600_v2.0.a1 Prupe.8G091600_v2.0.a1
pyrus_communis	pycom02g11070 pycom05g05360 pycom08g01980 pycom10g05550 pycom15g01880 pycom15g22300
rosa_chinensis	RchiOBHm_Chr2g0100571 RchiOBHm_Chr6g0265831 RchiOBHm_Chr6g0301661
rosa_laevigata	RLG00000011235 RLG00000014155 RLG00000016986
rosa_multiflora	Rmu_co8174844.1_g000001 Rmu_sc0000468.1_g000014 Rmu_sc0000528.1_g000006 Rmu_sc0000528.1_g000007 Rmu_sc0023062.1_g000002
rosa_roxburghii	Rroxscaffold_7G00166560 Rroxscaffold_7G00202340
rosa_rugosa	Rorug02G0089600 Rorug06G0020000 Rorug06G0307700
rosa_samantha	Rh2AG138700 Rh2BG142100 Rh2CG144400 Rh2DG143800 Rh6AG142200 Rh6AG420500 Rh6BG142100 Rh6BG426900 Rh6CG138700 Rh6CG433600 Rh6DG125900
rosa_wichuraiana	Rw2G010870 Rw6G012280 Rw6G036360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	143
AcuI	CTGAAG	4 cut(s)	9, 26, 209, 384
AflIII	ACRYGT	1 cut(s)	456
AgsI	TTSAA	1 cut(s)	430
AjuI	GAANNNNNNNTTGG	2 cut(s)	430, 462
AluBI	AGCT	2 cut(s)	278, 292
AluI	AGCT	2 cut(s)	278, 292
Alw21I	GWGCWC	3 cut(s)	280, 294, 419
Alw26I	GTCTC	1 cut(s)	315
AlwNI	CAGNNNCTG	1 cut(s)	56
Asp700I	GAANNNNTTC	1 cut(s)	66
AspLEI	GCGC	2 cut(s)	96, 144
AspS9I	GGNCC	1 cut(s)	82
AsuHPI	GGTGA	1 cut(s)	404
AvaII	GGWCC	1 cut(s)	82
BanII	GRGCYC	2 cut(s)	280, 294
BbsI	GAAGAC	2 cut(s)	176, 378
Bbv12I	GWGCWC	3 cut(s)	280, 294, 419
BccI	CCATC	2 cut(s)	277, 389
BceAI	ACGGC	1 cut(s)	186
BcoDI	GTCTC	1 cut(s)	315
BfaI	CTAG	2 cut(s)	12, 135
BfmI	CTRYAG	1 cut(s)	305
BglII	AGATCT	2 cut(s)	64, 131
BlpI	GCTNAGC	1 cut(s)	293
Bme18I	GGWCC	1 cut(s)	82
BmgT120I	GGNCC	1 cut(s)	82
BmsI	GCATC	2 cut(s)	129, 163
BoxI	GACNNNNGTC	1 cut(s)	307
BpiI	GAAGAC	2 cut(s)	176, 378
Bpu1102I	GCTNAGC	1 cut(s)	293
BpuEI	CTTGAG	2 cut(s)	272, 325
BsaAI	YACGTR	1 cut(s)	128
BsaBI	GATNNNNATC	2 cut(s)	63, 69
BsaJI	CCNNGG	1 cut(s)	410
Bse8I	GATNNNNATC	2 cut(s)	63, 69
BseDI	CCNNGG	1 cut(s)	410
BseGI	GGATG	2 cut(s)	144, 292
BseJI	GATNNNNATC	2 cut(s)	63, 69
BseMII	CTCAG	5 cut(s)	63, 286, 293, 307, 392
BsiHKAI	GWGCWC	3 cut(s)	280, 294, 419
BsmAI	GTCTC	1 cut(s)	315
BsmI	GAATGC	1 cut(s)	108
Bsp1286I	GDGCHC	3 cut(s)	280, 294, 419
Bsp143I	GATC	3 cut(s)	64, 131, 163
Bsp1720I	GCTNAGC	1 cut(s)	293
Bsp19I	CCATGG	1 cut(s)	410
BspCNI	CTCAG	5 cut(s)	62, 285, 292, 306, 391
BspMAI	CTGCAG	1 cut(s)	309
BssECI	CCNNGG	1 cut(s)	410
BssMI	GATC	3 cut(s)	64, 131, 163
BssT1I	CCWWGG	1 cut(s)	410
BstBAI	YACGTR	1 cut(s)	128
BstC8I	GCNNGC	1 cut(s)	38
BstDEI	CTNAG	5 cut(s)	49, 272, 279, 293, 378
BstDSI	CCRYGG	1 cut(s)	410
BstF5I	GGATG	2 cut(s)	144, 292
BstHHI	GCGC	2 cut(s)	96, 144
BstKTI	GATC	3 cut(s)	67, 134, 166
BstMAI	GTCTC	1 cut(s)	315
BstMBI	GATC	3 cut(s)	64, 131, 163
BstNSI	RCATGY	2 cut(s)	40, 460
BstPAI	GACNNNNGTC	1 cut(s)	307
BstSFI	CTRYAG	1 cut(s)	305
BstV2I	GAAGAC	2 cut(s)	176, 378
BstX2I	RGATCY	2 cut(s)	64, 131
BstYI	RGATCY	2 cut(s)	64, 131
BtgI	CCRYGG	1 cut(s)	410
BtsCI	GGATG	2 cut(s)	144, 292
Cac8I	GCNNGC	1 cut(s)	38
CaiI	CAGNNNCTG	1 cut(s)	56
CfoI	GCGC	2 cut(s)	96, 144
Cfr13I	GGNCC	1 cut(s)	82
CviAII	CATG	6 cut(s)	37, 79, 220, 244, 411, 457
CviJI	RGCY	7 cut(s)	54, 173, 278, 292, 352, 362, 446
CviKI_1	RGCY	7 cut(s)	54, 173, 278, 292, 352, 362, 446
DdeI	CTNAG	5 cut(s)	49, 272, 279, 293, 378
DpnI	GATC	3 cut(s)	66, 133, 165
DpnII	GATC	3 cut(s)	64, 131, 163
Ecl136II	GAGCTC	2 cut(s)	278, 292
Eco130I	CCWWGG	1 cut(s)	410
Eco24I	GRGCYC	2 cut(s)	280, 294
Eco32I	GATATC	1 cut(s)	322
Eco47I	GGWCC	1 cut(s)	82
Eco53kI	GAGCTC	2 cut(s)	278, 292
Eco57I	CTGAAG	4 cut(s)	9, 26, 209, 384
EcoICRI	GAGCTC	2 cut(s)	278, 292
EcoRV	GATATC	1 cut(s)	322
EcoT14I	CCWWGG	1 cut(s)	410
EcoT38I	GRGCYC	2 cut(s)	280, 294
ErhI	CCWWGG	1 cut(s)	410
FaeI	CATG	6 cut(s)	40, 82, 223, 247, 414, 460
FaiI	YATR	9 cut(s)	38, 80, 221, 245, 326, 412, 443, 458, 464
FatI	CATG	6 cut(s)	36, 78, 219, 243, 410, 456
FokI	GGATG	2 cut(s)	151, 299
FriOI	GRGCYC	2 cut(s)	280, 294
FspBI	CTAG	2 cut(s)	12, 135
FspI	TGCGCA	1 cut(s)	143
GlaI	GCGC	2 cut(s)	95, 143
HhaI	GCGC	2 cut(s)	96, 144
Hin1II	CATG	6 cut(s)	40, 82, 223, 247, 414, 460
Hin6I	GCGC	2 cut(s)	94, 142
HinP1I	GCGC	2 cut(s)	94, 142
HinfI	GANTC	1 cut(s)	119
HphI	GGTGA	1 cut(s)	404
Hpy188I	TCNGA	8 cut(s)	45, 58, 159, 168, 189, 275, 282, 381
Hpy188III	TCNNGA	1 cut(s)	116
HpyAV	CCTTC	1 cut(s)	187
HpyCH4IV	ACGT	1 cut(s)	127
HpyCH4V	TGCA	2 cut(s)	307, 333
HpyF3I	CTNAG	5 cut(s)	49, 272, 279, 293, 378
HpySE526I	ACGT	1 cut(s)	127
Hsp92II	CATG	6 cut(s)	40, 82, 223, 247, 414, 460
HspAI	GCGC	2 cut(s)	94, 142
Kzo9I	GATC	3 cut(s)	64, 131, 163
LmnI	GCTCC	2 cut(s)	151, 414
LpnPI	CCDG	4 cut(s)	12, 36, 59, 134
LweI	GCATC	2 cut(s)	129, 163
MaeI	CTAG	2 cut(s)	12, 135
MaeII	ACGT	1 cut(s)	127
MaeIII	GTNAC	1 cut(s)	226
MalI	GATC	3 cut(s)	66, 133, 165
MboI	GATC	3 cut(s)	64, 131, 163
MboII	GAAGA	8 cut(s)	15, 59, 74, 176, 202, 377, 380, 383
MflI	RGATCY	2 cut(s)	64, 131
MhlI	GDGCHC	3 cut(s)	280, 294, 419
MluCI	AATT	2 cut(s)	177, 438
MnlI	CCTC	4 cut(s)	221, 247, 281, 352
MroXI	GAANNNNTTC	1 cut(s)	66
MseI	TTAA	3 cut(s)	336, 405, 469
MslI	CAYNNNNRTG	3 cut(s)	218, 224, 461
Mva1269I	GAATGC	1 cut(s)	108
NcoI	CCATGG	1 cut(s)	410
NdeII	GATC	3 cut(s)	64, 131, 163
NlaIII	CATG	6 cut(s)	40, 82, 223, 247, 414, 460
NmuCI	GTSAC	1 cut(s)	226
NsbI	TGCGCA	1 cut(s)	143
NspI	RCATGY	2 cut(s)	40, 460
PaeI	GCATGC	1 cut(s)	40
PciI	ACATGT	1 cut(s)	456
PctI	GAATGC	1 cut(s)	108
PdmI	GAANNNNTTC	1 cut(s)	66
PfeI	GAWTC	1 cut(s)	119
Ppu21I	YACGTR	1 cut(s)	128
PscI	ACATGT	1 cut(s)	456
PshAI	GACNNNNGTC	1 cut(s)	307
Psp124BI	GAGCTC	2 cut(s)	280, 294
PspPI	GGNCC	1 cut(s)	82
PstI	CTGCAG	1 cut(s)	309
PstNI	CAGNNNCTG	1 cut(s)	56
PsuI	RGATCY	2 cut(s)	64, 131
RseI	CAYNNNNRTG	3 cut(s)	218, 224, 461
SacI	GAGCTC	2 cut(s)	280, 294
SaqAI	TTAA	3 cut(s)	336, 405, 469
Sau3AI	GATC	3 cut(s)	64, 131, 163
Sau96I	GGNCC	1 cut(s)	82
SduI	GDGCHC	3 cut(s)	280, 294, 419
SetI	ASST	5 cut(s)	78, 130, 252, 280, 294
SfaNI	GCATC	2 cut(s)	129, 163
SfcI	CTRYAG	1 cut(s)	305
SinI	GGWCC	1 cut(s)	82
SmiMI	CAYNNNNRTG	3 cut(s)	218, 224, 461
SmlI	CTYRAG	2 cut(s)	251, 340
SmoI	CTYRAG	2 cut(s)	251, 340
SphI	GCATGC	1 cut(s)	40
Sse9I	AATT	2 cut(s)	177, 438
SspMI	CTAG	2 cut(s)	12, 135
SstI	GAGCTC	2 cut(s)	280, 294
StyI	CCWWGG	1 cut(s)	410
TaiI	ACGT	1 cut(s)	130
TaqII	GACCGA	1 cut(s)	176
TasI	AATT	2 cut(s)	177, 438
TfiI	GAWTC	1 cut(s)	119
Tru1I	TTAA	3 cut(s)	336, 405, 469
Tru9I	TTAA	3 cut(s)	336, 405, 469
TseFI	GTSAC	1 cut(s)	226
Tsp45I	GTSAC	1 cut(s)	226
TspDTI	ATGAA	4 cut(s)	59, 75, 236, 260
VpaK11BI	GGWCC	1 cut(s)	82
XceI	RCATGY	2 cut(s)	40, 460
XmnI	GAANNNNTTC	1 cut(s)	66
XspI	CTAG	2 cut(s)	12, 135

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.