Prupe.1G374400_v2.0.a1
BZIP Family

Ocs element-binding factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001596
Physical Location & Seq
Reverse (-)
34000399 .. 34001332
934 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G374400.1

Sequence Viewer

Length: 501 bp
ATGGCTTCCTCTAGTGGGAATTCCTCTGGTTCCACTCAGCTTCAGAACTCCGGTTCTGAAGGGGACTTGCAGCATCTGATGGATCAGAGAAAAAGGAAAAGAATGCAATCAAACCGCGAATCGGCGAGGCGGTCCCGGATGCGAAAGCAGCAGCACTTGGATGATCTGATGGGCCAAGTGACGCAGCTGAGGAAGGAAAACAACCAAATCTTGACCAGCATAAACATCACGACCCAGCACTTGATGAATGTTGAGGCTGAAAATTCAGTCTTGAAGGCTCAGATGGAAGAGCTCAGCCAAAGACTGGAGTCTCTGACTGAGATCCTCAACTACATCAACAGCAGCAATGGGGTCTTTGAAACCCATGAACCCAACAACACCCTTCTTCATCATCATCAGGCCTCTGCTTCTGCTGATCACAACAGTTTCATCAACCCATGGAATTTGCTTTATGTGAACCAACCCATCATGGCCACTGCAGACATGCTCCATCAATACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
bZIP_1

Protein Analysis

167

Amino Acids

18.96

Weight (kDa)

6.49

Isoelectric Point (pI)

47.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 304
AccII CGCG 1 cut(s) 117
AciI CCGC 2 cut(s) 115, 130
AclWI GGATC 2 cut(s) 90, 316
AcoI YGGCCR 1 cut(s) 471
AcsI RAATTY 3 cut(s) 19, 262, 442
AcuI CTGAAG 2 cut(s) 26, 78
AfiI CCNNNNNNNGG 3 cut(s) 15, 121, 304
AgsI TTSAA 2 cut(s) 274, 359
AluBI AGCT 3 cut(s) 40, 187, 292
AluI AGCT 3 cut(s) 40, 187, 292
Alw21I GWGCWC 1 cut(s) 294
Alw26I GTCTC 1 cut(s) 315
AlwI GGATC 2 cut(s) 90, 316
AlwNI CAGNNNCTG 1 cut(s) 76
AoxI GGCC 3 cut(s) 172, 399, 471
ApeKI GCWGC 5 cut(s) 70, 148, 151, 184, 342
ApoI RAATTY 3 cut(s) 19, 262, 442
AspS9I GGNCC 2 cut(s) 132, 172
AsuC2I CCSGG 1 cut(s) 136
AvaII GGWCC 1 cut(s) 132
BalI TGGCCA 1 cut(s) 473
BanII GRGCYC 1 cut(s) 294
Bbv12I GWGCWC 1 cut(s) 294
BbvCI CCTCAGC 1 cut(s) 188
BbvI GCAGC 5 cut(s) 82, 160, 163, 196, 354
BccI CCATC 5 cut(s) 73, 163, 277, 473, 498
BclI TGATCA 1 cut(s) 415
BcnI CCSGG 1 cut(s) 136
BcoDI GTCTC 1 cut(s) 315
BfaI CTAG 1 cut(s) 12
BfmI CTRYAG 1 cut(s) 477
BisI GCNGC 5 cut(s) 71, 149, 152, 185, 343
BlpI GCTNAGC 1 cut(s) 293
BlsI GCNGC 5 cut(s) 72, 150, 153, 186, 344
Bme1390I CCNGG 1 cut(s) 136
Bme18I GGWCC 1 cut(s) 132
BmgT120I GGNCC 2 cut(s) 132, 172
BmiI GGNNCC 2 cut(s) 31, 134
BmrFI CCNGG 1 cut(s) 136
BmsI GCATC 2 cut(s) 82, 129
BoxI GACNNNNGTC 1 cut(s) 307
BpmI CTGGAG 1 cut(s) 326
Bpu10I CCTNAGC 1 cut(s) 188
Bpu1102I GCTNAGC 1 cut(s) 293
BpuMI CCSGG 1 cut(s) 136
BsaJI CCNNGG 1 cut(s) 437
BsaWI WCCGGW 1 cut(s) 50
Bsc4I CCNNNNNNNGG 3 cut(s) 15, 121, 304
Bse1I ACTGG 1 cut(s) 309
Bse3DI GCAATG 1 cut(s) 352
BseDI CCNNGG 1 cut(s) 437
BseGI GGATG 2 cut(s) 144, 166
BseLI CCNNNNNNNGG 3 cut(s) 15, 121, 304
BseMI GCAATG 1 cut(s) 352
BseMII CTCAG 5 cut(s) 50, 179, 293, 307, 309
BseNI ACTGG 1 cut(s) 309
BseXI GCAGC 5 cut(s) 82, 160, 163, 196, 354
BseYI CCCAGC 1 cut(s) 234
Bsh1236I CGCG 1 cut(s) 117
BshFI GGCC 3 cut(s) 174, 401, 473
BsiHKAI GWGCWC 1 cut(s) 294
BsiSI CCGG 2 cut(s) 51, 136
BslFI GGGAC 2 cut(s) 77, 118
BslI CCNNNNNNNGG 3 cut(s) 15, 121, 304
BsmAI GTCTC 1 cut(s) 315
BsmFI GGGAC 2 cut(s) 77, 118
BsmI GAATGC 1 cut(s) 108
BsnI GGCC 3 cut(s) 174, 401, 473
Bsp1286I GDGCHC 1 cut(s) 294
Bsp143I GATC 4 cut(s) 82, 163, 321, 415
Bsp1720I GCTNAGC 1 cut(s) 293
Bsp19I CCATGG 1 cut(s) 437
BspACI CCGC 2 cut(s) 115, 130
BspANI GGCC 3 cut(s) 174, 401, 473
BspCNI CTCAG 5 cut(s) 49, 180, 292, 306, 310
BspFNI CGCG 1 cut(s) 117
BspLI GGNNCC 2 cut(s) 31, 134
BspMAI CTGCAG 1 cut(s) 481
BspPI GGATC 2 cut(s) 90, 316
BspQI GCTCTTC 1 cut(s) 282
BsrDI GCAATG 1 cut(s) 352
BsrI ACTGG 1 cut(s) 309
BssECI CCNNGG 1 cut(s) 437
BssMI GATC 4 cut(s) 82, 163, 321, 415
BssT1I CCWWGG 1 cut(s) 437
Bst4CI ACNGT 1 cut(s) 425
Bst6I CTCTTC 1 cut(s) 282
BstDEI CTNAG 5 cut(s) 36, 188, 279, 293, 318
BstDSI CCRYGG 1 cut(s) 437
BstF5I GGATG 2 cut(s) 144, 166
BstFNI CGCG 1 cut(s) 117
BstKTI GATC 4 cut(s) 85, 166, 324, 418
BstMAI GTCTC 1 cut(s) 315
BstMBI GATC 4 cut(s) 82, 163, 321, 415
BstMWI GCNNNNNNNGC 1 cut(s) 148
BstNSI RCATGY 1 cut(s) 487
BstPAI GACNNNNGTC 1 cut(s) 307
BstSCI CCNGG 1 cut(s) 134
BstSFI CTRYAG 1 cut(s) 477
BstUI CGCG 1 cut(s) 117
BstV1I GCAGC 5 cut(s) 82, 160, 163, 196, 354
BstX2I RGATCY 1 cut(s) 321
BstYI RGATCY 1 cut(s) 321
BsuRI GGCC 3 cut(s) 174, 401, 473
BtgI CCRYGG 1 cut(s) 437
BtsCI GGATG 2 cut(s) 144, 166
BtsI GCAGTG 1 cut(s) 474
BtsIMutI CAGTG 1 cut(s) 474
CaiI CAGNNNCTG 1 cut(s) 76
Cfr13I GGNCC 2 cut(s) 132, 172
CseI GACGC 1 cut(s) 190
CviAII CATG 4 cut(s) 365, 438, 469, 484
DdeI CTNAG 5 cut(s) 36, 188, 279, 293, 318
DpnI GATC 4 cut(s) 84, 165, 323, 417
DpnII GATC 4 cut(s) 82, 163, 321, 415
EaeI YGGCCR 1 cut(s) 471
Eam1104I CTCTTC 1 cut(s) 282
EarI CTCTTC 1 cut(s) 282
Ecl136II GAGCTC 1 cut(s) 292
Eco130I CCWWGG 1 cut(s) 437
Eco147I AGGCCT 1 cut(s) 401
Eco24I GRGCYC 1 cut(s) 294
Eco47I GGWCC 1 cut(s) 132
Eco53kI GAGCTC 1 cut(s) 292
Eco57I CTGAAG 2 cut(s) 26, 78
EcoICRI GAGCTC 1 cut(s) 292
EcoRI GAATTC 1 cut(s) 19
EcoT14I CCWWGG 1 cut(s) 437
EcoT38I GRGCYC 1 cut(s) 294
ErhI CCWWGG 1 cut(s) 437
FaeI CATG 4 cut(s) 368, 441, 472, 487
FaiI YATR 6 cut(s) 221, 366, 439, 453, 470, 485
FaqI GGGAC 2 cut(s) 77, 118
FatI CATG 4 cut(s) 364, 437, 468, 483
FbaI TGATCA 1 cut(s) 415
Fnu4HI GCNGC 5 cut(s) 71, 149, 152, 185, 343
FokI GGATG 2 cut(s) 151, 173
FriOI GRGCYC 1 cut(s) 294
Fsp4HI GCNGC 5 cut(s) 71, 149, 152, 185, 343
FspBI CTAG 1 cut(s) 12
GluI GCNGC 5 cut(s) 71, 149, 152, 185, 343
GsaI CCCAGC 1 cut(s) 238
GsuI CTGGAG 1 cut(s) 326
HaeIII GGCC 3 cut(s) 174, 401, 473
HapII CCGG 2 cut(s) 51, 136
HgaI GACGC 1 cut(s) 190
Hin1II CATG 4 cut(s) 368, 441, 472, 487
HinfI GANTC 2 cut(s) 119, 308
HpaII CCGG 2 cut(s) 51, 136
Hpy166II GTNNAC 1 cut(s) 457
Hpy188I TCNGA 7 cut(s) 45, 58, 78, 87, 168, 282, 315
Hpy188III TCNNGA 3 cut(s) 211, 229, 271
Hpy8I GTNNAC 1 cut(s) 457
HpyAV CCTTC 4 cut(s) 53, 187, 268, 392
HpyCH4III ACNGT 1 cut(s) 425
HpyCH4V TGCA 3 cut(s) 70, 106, 479
HpyF10VI GCNNNNNNNGC 1 cut(s) 148
HpyF3I CTNAG 5 cut(s) 36, 188, 279, 293, 318
Hsp92II CATG 4 cut(s) 368, 441, 472, 487
Ksp22I TGATCA 1 cut(s) 415
Kzo9I GATC 4 cut(s) 82, 163, 321, 415
LguI GCTCTTC 1 cut(s) 282
LmnI GCTCC 1 cut(s) 492
LpnPI CCDG 7 cut(s) 12, 64, 149, 229, 248, 290, 383
Lsp1109I GCAGC 5 cut(s) 82, 160, 163, 196, 354
LweI GCATC 2 cut(s) 82, 129
MaeI CTAG 1 cut(s) 12
MaeIII GTNAC 1 cut(s) 178
MalI GATC 4 cut(s) 84, 165, 323, 417
MboI GATC 4 cut(s) 82, 163, 321, 415
MboII GAAGA 2 cut(s) 299, 377
MflI RGATCY 1 cut(s) 321
MhlI GDGCHC 1 cut(s) 294
MlsI TGGCCA 1 cut(s) 473
MluCI AATT 3 cut(s) 19, 262, 442
MluNI TGGCCA 1 cut(s) 473
MlyI GAGTC 1 cut(s) 317
MnlI CCTC 7 cut(s) 19, 34, 120, 183, 247, 335, 412
Mox20I TGGCCA 1 cut(s) 473
MscI TGGCCA 1 cut(s) 473
MslI CAYNNNNRTG 1 cut(s) 159
Msp20I TGGCCA 1 cut(s) 473
MspA1I CMGCKG 1 cut(s) 187
MspI CCGG 2 cut(s) 51, 136
MspR9I CCNGG 1 cut(s) 136
Mva1269I GAATGC 1 cut(s) 108
MvnI CGCG 1 cut(s) 117
MwoI GCNNNNNNNGC 1 cut(s) 148
NciI CCSGG 1 cut(s) 136
NcoI CCATGG 1 cut(s) 437
NdeII GATC 4 cut(s) 82, 163, 321, 415
NlaIII CATG 4 cut(s) 368, 441, 472, 487
NlaIV GGNNCC 2 cut(s) 31, 134
NmuCI GTSAC 1 cut(s) 178
NspI RCATGY 1 cut(s) 487
PceI AGGCCT 1 cut(s) 401
PciSI GCTCTTC 1 cut(s) 282
PctI GAATGC 1 cut(s) 108
PfeI GAWTC 1 cut(s) 119
PflMI CCANNNNNTGG 1 cut(s) 304
PfoI TCCNGGA 1 cut(s) 134
PkrI GCNGC 5 cut(s) 72, 150, 153, 186, 344
PleI GAGTC 1 cut(s) 316
PpsI GAGTC 1 cut(s) 316
PshAI GACNNNNGTC 1 cut(s) 307
Psp124BI GAGCTC 1 cut(s) 294
PspFI CCCAGC 1 cut(s) 234
PspN4I GGNNCC 2 cut(s) 31, 134
PspPI GGNCC 2 cut(s) 132, 172
PstI CTGCAG 1 cut(s) 481
PstNI CAGNNNCTG 1 cut(s) 76
PsuI RGATCY 1 cut(s) 321
PvuII CAGCTG 1 cut(s) 187
RseI CAYNNNNRTG 1 cut(s) 159
SacI GAGCTC 1 cut(s) 294
SapI GCTCTTC 1 cut(s) 282
SatI GCNGC 5 cut(s) 71, 149, 152, 185, 343
Sau3AI GATC 4 cut(s) 82, 163, 321, 415
Sau96I GGNCC 2 cut(s) 132, 172
SchI GAGTC 1 cut(s) 317
ScrFI CCNGG 1 cut(s) 136
SduI GDGCHC 1 cut(s) 294
SetI ASST 3 cut(s) 42, 189, 294
SfaNI GCATC 2 cut(s) 82, 129
SfcI CTRYAG 1 cut(s) 477
SinI GGWCC 1 cut(s) 132
SmiMI CAYNNNNRTG 1 cut(s) 159
Sse9I AATT 3 cut(s) 19, 262, 442
SseBI AGGCCT 1 cut(s) 401
SsiI CCGC 2 cut(s) 115, 130
SspMI CTAG 1 cut(s) 12
SstI GAGCTC 1 cut(s) 294
StuI AGGCCT 1 cut(s) 401
StyD4I CCNGG 1 cut(s) 134
StyI CCWWGG 1 cut(s) 437
TaaI ACNGT 1 cut(s) 425
TasI AATT 3 cut(s) 19, 262, 442
TfiI GAWTC 1 cut(s) 119
TscAI CASTG 1 cut(s) 481
TseFI GTSAC 1 cut(s) 178
TseI GCWGC 5 cut(s) 70, 148, 151, 184, 342
Tsp45I GTSAC 1 cut(s) 178
TspDTI ATGAA 4 cut(s) 260, 377, 381, 418
TspRI CASTG 1 cut(s) 481
Van91I CCANNNNNTGG 1 cut(s) 304
VpaK11BI GGWCC 1 cut(s) 132
XapI RAATTY 3 cut(s) 19, 262, 442
XceI RCATGY 1 cut(s) 487
XspI CTAG 1 cut(s) 12
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.