AT2G06040

Leucine-rich repeats, outliers

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0002012
Physical Location & Seq
Reverse (-)
2352145 .. 2355597
3453 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G06040.1

Sequence Viewer

Length: 2289 bp
ATGACGATTCTTCGATCTCGCGAAATCCCATCTGTCTCACCCAAGCCACTCCCTAAAGAATCCGACACTGAGCCGTCGACTCCCGCTCGTACACTAGAGCCCGAACTTCACCGCTCGCCGGATGAGACCGCTCCTGAATTGGGTCTTGTTGATGAACCCACTCACACTACCCGGAGACGTAGTCTTCGTCTTGCACACCAATTTGACGGCGATGATTGTGTCACTGAGAAAGAGGTTAGTGTGGATGAAAAGTTTTTGAGTTTGCGTTCAGGGAAGAGAGTTGCTAAGAGAGGTGTCGATTATGGAATTGAAATTGAGTCTAGCAAGTTTGATTTCGATTTAAAGTTAGGAGAAAGTGCGAGTAAAACAAAGAGGGTTTGTGTGGATTTGGTTGAAGAAACTATTGTGAAGAATGAATCAGAGGATAGTGTGGATTTGGAAGATAAGAGTAGTAGTGGTGTGTTAGGTGACTCGTTAGCGGAGAAGTGGTATGTAGTAGAAGTAGAGAATGAGAGCAATAACAAAGGAAAGGGGATAATGGAAGATTCCTATGGAGAAAGTGATGTGATTTGTGGTCAGAGTTATGAGAAGCAGAGTAGTTCTATGGGTAGAAGAAGATATACTAGGGAGGAGAAGGGAAAGGGTATTATGCAGGTGGAGGATGTTTCTTCTCCGGTAACGGTTGAGATTGTCGAAGTTGATGAAGAAGAAATGGAAATCGAGAGCTTGGTTAACAGTGAGAAGCCCCCGGATGTCTCTGTAACAGAATTGGCTGCGACGATGGCTAATGTTGAGCAAGCGCAGAATCGAGAAAATAGTAATGAGATTGGAAACGATTCAAGAACTCAGCACTTTCGTGACATTGCAGAGAGGATTGCTCACAGATTTGCTCATTTTGATGCTCAAGTGGAGGAAGAAGAGGATTTGTCAGATAAAGAGGGGGAGCAGCAGGTCGAAGATTGGCCGGGTCCTTTCTCTACTGCTATGAAAATAATTAAGGACCGAGAAGAGTACACGACTCCGCATGTTGGTATTGGCGTCTCCAACAAAGAAAGATCTTCACCAACTATTTGGGTTCCCAGAAGTAACTTTAGTTTCCCCCCTCGGAAGGCTCCATCTCTGCAAGAATTATCCTTGCGAGTTCTTGTCAAGAATGCTGATGCCATCACTTCTCTTGACTATGTTCCAGACACATTGAGGGTCAAACTTTGTCAATTGCTTTGTGATTCTAGGAGAATGGACCTACACTTTCTTGATCTTCTTGTCCAGGGATCTCCAACAGAAATTTGTGTTCCAGATTGCTCATGGCTGACCGAGGAAGAGTTCACTGAATGTTTTAAGAACTGTGACACCAGCAACTTGATGGTTCTTCAACTTGACCAGTGTGGGCGGTGTATGCCAGATTATATATTACCCTTCACTTTAGCAAGGTCACCAAAAGTGTTGCCGATGCTATCTACTTTATCTATAAGTGGTGCATGCCGGCTTTCCGATGTGGGGCTACGACAACTGGTTTCCTCTGCTCCTGCGATTACGTCTATTAATCTCAACCAATGCTCTCTTCTAACATCATCTAGCATTGATATGTTATCTGATTCATTGGGGTCAGTTTTAAGGGAACTGTATATCAACGAGTGCCAAAACATTGATATGAAGCATATTCTCGCAGCATTGAAAAAGTTTGAGAAGTTGGAAGTATTGTCCCTTGCGGATCTTCCTTCTGTCAAGGGTCGGTTCTTGAAGGAGTTTGTTACTGCTAGAGGTCAGACCCTGAAGCAGCTGATTTTGACCAACTCTCGGAAGTTATCTGATTCTTCTATTAAAGTCATCTCTGAAAACTGTCCCAATTTAAGCGTCCTTGACCTGGCTAACGTATGCAAGCTGACAGATTCTTCTCTGGGTTACCTTGCAAATGGCTGTCAAGCGTTGGAGAAATTGATTTTTTGTCGCAACCCTTTCAGTGATGAAGCTGTAGCTGCATTTGTAGAAACCGCAGGTGGTTCTCTGAAGGAGCTATCACTAAACAATGTTAAGAAGGTTGGCCACAACACGGCCCTAGCACTTGCCAAACATTCAGATAAACTGCAGATTTTGGATATATCCTGGTGCCGAGAAATGTCCAACGATTTATTAGGCTACATTGTCGATAACAGTTCATCTCTGAAAGTGTTGAAGGTCTTTGGATGCAGTCAGGTGACGGATGTATTTGTTAAAGGTCACTCAAATCCTAATGTCAAGATCTTAGGTGTGAAGATGGATCCTTTCTTAGGCCACCTTTCTGATAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_6

Protein Analysis

762

Amino Acids

84.66

Weight (kDa)

4.96

Isoelectric Point (pI)

50.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7885 PF25372 592 - 735 9.9e-08 Leucine Rich Repeat Domain of unknown function (DUF7885)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 643, 1985
Acc36I ACCTGC 3 cut(s) 643, 940, 1985
AccB1I GGYRCC 1 cut(s) 2106
AccBSI CCGCTC 3 cut(s) 86, 114, 131
AccI GTMKAC 1 cut(s) 77
AccII CGCG 1 cut(s) 21
AciI CCGC 8 cut(s) 84, 112, 129, 479, 1022, 1390, 1709, 1992
AclWI GGATC 4 cut(s) 1279, 1719, 2252, 2265
AcoI YGGCCR 2 cut(s) 962, 2041
AcsI RAATTY 1 cut(s) 1284
AcuI CTGAAG 2 cut(s) 1793, 2027
AcyI GRCGYC 1 cut(s) 1038
AfaI GTAC 2 cut(s) 91, 1013
AfiI CCNNNNNNNGG 9 cut(s) 118, 140, 1028, 1108, 1497, 1797, 1864, 2050, 2267
AgsI TTSAA 7 cut(s) 311, 395, 840, 1373, 1675, 1741, 2173
AjnI CCWGG 3 cut(s) 1266, 1863, 2102
AjuI GAANNNNNNNTTGG 2 cut(s) 1545, 1577
AleI CACNNNNGTG 1 cut(s) 855
AluBI AGCT 6 cut(s) 726, 1780, 1882, 1970, 1976, 2014
AluI AGCT 6 cut(s) 726, 1780, 1882, 1970, 1976, 2014
Alw26I GTCTC 5 cut(s) 40, 119, 169, 760, 1045
AlwI GGATC 4 cut(s) 1279, 1719, 2252, 2265
AlwNI CAGNNNCTG 1 cut(s) 1771
AoxI GGCC 4 cut(s) 962, 2041, 2052, 2269
ApeKI GCWGC 5 cut(s) 773, 946, 1667, 1777, 1976
ApoI RAATTY 1 cut(s) 1284
ArsI GACNNNNNNTTYG 2 cut(s) 168, 200
AseI ATTAAT 1 cut(s) 1542
Asp700I GAANNNNTTC 1 cut(s) 835
AspLEI GCGC 1 cut(s) 802
AspS9I GGNCC 4 cut(s) 968, 1000, 1240, 2053
AsuC2I CCSGG 3 cut(s) 172, 749, 966
AsuHPI GGTGA 6 cut(s) 30, 101, 479, 1053, 1425, 2206
AvaII GGWCC 3 cut(s) 968, 1000, 1240
BalI TGGCCA 1 cut(s) 2043
BamHI GGATCC 1 cut(s) 2257
BanI GGYRCC 1 cut(s) 2106
BanII GRGCYC 1 cut(s) 102
BarI GAAGNNNNNNTAC 2 cut(s) 604, 636
BbsI GAAGAC 1 cut(s) 176
BbvI GCAGC 5 cut(s) 760, 958, 1679, 1789, 1963
BccI CCATC 6 cut(s) 37, 775, 1123, 1172, 1357, 2248
BceAI ACGGC 3 cut(s) 58, 223, 2067
BciT130I CCWGG 3 cut(s) 1268, 1865, 2104
BcnI CCSGG 3 cut(s) 172, 749, 966
BcoDI GTCTC 5 cut(s) 40, 119, 169, 760, 1045
BfaI CTAG 7 cut(s) 95, 321, 624, 1230, 1575, 1758, 2057
BfmI CTRYAG 2 cut(s) 1971, 2084
BfuAI ACCTGC 3 cut(s) 643, 940, 1985
BglII AGATCT 2 cut(s) 1055, 2238
BisI GCNGC 5 cut(s) 774, 947, 1668, 1778, 1977
BlsI GCNGC 5 cut(s) 775, 948, 1669, 1779, 1978
Bme1390I CCNGG 6 cut(s) 172, 749, 966, 1268, 1865, 2104
Bme18I GGWCC 3 cut(s) 968, 1000, 1240
BmgT120I GGNCC 4 cut(s) 968, 1000, 1240, 2053
BmiI GGNNCC 5 cut(s) 969, 1077, 1113, 2108, 2259
BmrFI CCNGG 6 cut(s) 172, 749, 966, 1268, 1865, 2104
BmsI GCATC 4 cut(s) 889, 1150, 1440, 2174
BpiI GAAGAC 1 cut(s) 176
BplI GAGNNNNNCTC 2 cut(s) 862, 894
BpuEI CTTGAG 1 cut(s) 888
BpuMI CCSGG 3 cut(s) 172, 749, 966
BsaHI GRCGYC 1 cut(s) 1038
BsaI GGTCTC 1 cut(s) 119
BsaJI CCNNGG 4 cut(s) 747, 1103, 1267, 1314
BsaWI WCCGGW 1 cut(s) 673
BsaXI ACNNNNNCTCC 4 cut(s) 166, 196, 473, 503
Bsc4I CCNNNNNNNGG 9 cut(s) 118, 140, 1028, 1108, 1497, 1797, 1864, 2050, 2267
Bse118I RCCGGY 1 cut(s) 1482
Bse1I ACTGG 2 cut(s) 1381, 1515
Bse3DI GCAATG 1 cut(s) 861
BseBI CCWGG 3 cut(s) 1268, 1865, 2104
BseDI CCNNGG 4 cut(s) 747, 1103, 1267, 1314
BseGI GGATG 6 cut(s) 127, 250, 667, 757, 2189, 2206
BseLI CCNNNNNNNGG 9 cut(s) 118, 140, 1028, 1108, 1497, 1797, 1864, 2050, 2267
BseMI GCAATG 1 cut(s) 861
BseMII CTCAG 3 cut(s) 60, 216, 860
BseNI ACTGG 2 cut(s) 1381, 1515
BseRI GAGGAG 1 cut(s) 644
BseXI GCAGC 5 cut(s) 760, 958, 1679, 1789, 1963
Bsh1236I CGCG 1 cut(s) 21
BshFI GGCC 4 cut(s) 964, 2043, 2054, 2271
BshNI GGYRCC 1 cut(s) 2106
BsiSI CCGG 6 cut(s) 119, 172, 674, 749, 965, 1483
BslFI GGGAC 2 cut(s) 1687, 1827
BslI CCNNNNNNNGG 9 cut(s) 118, 140, 1028, 1108, 1497, 1797, 1864, 2050, 2267
BsmAI GTCTC 5 cut(s) 40, 119, 169, 760, 1045
BsmBI CGTCTC 2 cut(s) 169, 1045
BsmFI GGGAC 2 cut(s) 1687, 1827
BsmI GAATGC 1 cut(s) 1159
BsnI GGCC 4 cut(s) 964, 2043, 2054, 2271
Bso31I GGTCTC 1 cut(s) 119
Bsp1286I GDGCHC 1 cut(s) 102
Bsp143I GATC 7 cut(s) 14, 1055, 1255, 1271, 1711, 2238, 2257
Bsp68I TCGCGA 1 cut(s) 21
BspACI CCGC 8 cut(s) 84, 112, 129, 479, 1022, 1390, 1709, 1992
BspANI GGCC 4 cut(s) 964, 2043, 2054, 2271
BspCNI CTCAG 3 cut(s) 61, 217, 859
BspFNI CGCG 1 cut(s) 21
BspLI GGNNCC 5 cut(s) 969, 1077, 1113, 2108, 2259
BspMAI CTGCAG 1 cut(s) 2088
BspMI ACCTGC 3 cut(s) 643, 940, 1985
BspPI GGATC 4 cut(s) 1279, 1719, 2252, 2265
BspT107I GGYRCC 1 cut(s) 2106
BspTNI GGTCTC 1 cut(s) 119
BsrBI CCGCTC 3 cut(s) 86, 114, 131
BsrDI GCAATG 1 cut(s) 861
BsrFI RCCGGY 1 cut(s) 1482
BsrI ACTGG 2 cut(s) 1381, 1515
BssAI RCCGGY 1 cut(s) 1482
BssECI CCNNGG 4 cut(s) 747, 1103, 1267, 1314
BssMI GATC 7 cut(s) 14, 1055, 1255, 1271, 1711, 2238, 2257
BssNI GRCGYC 1 cut(s) 1038
Bst2UI CCWGG 3 cut(s) 1268, 1865, 2104
Bst4CI ACNGT 6 cut(s) 682, 737, 1346, 1623, 1841, 2153
Bst6I CTCTTC 5 cut(s) 269, 912, 1002, 1314, 1566
BstACI GRCGYC 1 cut(s) 1038
BstC8I GCNNGC 5 cut(s) 116, 798, 1480, 1484, 1880
BstDEI CTNAG 6 cut(s) 69, 225, 285, 846, 2242, 2266
BstEII GGTNACC 2 cut(s) 1431, 1901
BstENI CCTNNNNNAGG 1 cut(s) 2265
BstF5I GGATG 6 cut(s) 127, 250, 667, 757, 2189, 2206
BstFNI CGCG 1 cut(s) 21
BstHHI GCGC 1 cut(s) 802
BstKTI GATC 7 cut(s) 17, 1058, 1258, 1274, 1714, 2241, 2260
BstMAI GTCTC 5 cut(s) 40, 119, 169, 760, 1045
BstMBI GATC 7 cut(s) 14, 1055, 1255, 1271, 1711, 2238, 2257
BstMWI GCNNNNNNNGC 3 cut(s) 782, 1396, 1976
BstNI CCWGG 3 cut(s) 1268, 1865, 2104
BstNSI RCATGY 2 cut(s) 1028, 1482
BstPI GGTNACC 2 cut(s) 1431, 1901
BstSCI CCNGG 6 cut(s) 170, 747, 964, 1266, 1863, 2102
BstSFI CTRYAG 2 cut(s) 1971, 2084
BstUI CGCG 1 cut(s) 21
BstV1I GCAGC 5 cut(s) 760, 958, 1679, 1789, 1963
BstV2I GAAGAC 1 cut(s) 176
BstX2I RGATCY 5 cut(s) 1055, 1271, 1711, 2238, 2257
BstXI CCANNNNNNTGG 1 cut(s) 1071
BstYI RGATCY 5 cut(s) 1055, 1271, 1711, 2238, 2257
BsuRI GGCC 4 cut(s) 964, 2043, 2054, 2271
BtgZI GCGATG 1 cut(s) 225
BtsCI GGATG 6 cut(s) 127, 250, 667, 757, 2189, 2206
BtsIMutI CAGTG 6 cut(s) 66, 222, 742, 1326, 1388, 1966
BtuMI TCGCGA 1 cut(s) 21
BveI ACCTGC 3 cut(s) 643, 940, 1985
Cac8I GCNNGC 5 cut(s) 116, 798, 1480, 1484, 1880
CaiI CAGNNNCTG 1 cut(s) 1771
CfoI GCGC 1 cut(s) 802
Cfr10I RCCGGY 1 cut(s) 1482
Cfr13I GGNCC 4 cut(s) 968, 1000, 1240, 2053
CseI GACGC 2 cut(s) 1027, 1843
Csp6I GTAC 2 cut(s) 90, 1012
CviAII CATG 3 cut(s) 1025, 1305, 1479
CviQI GTAC 2 cut(s) 90, 1012
DdeI CTNAG 6 cut(s) 69, 225, 285, 846, 2242, 2266
DpnI GATC 7 cut(s) 16, 1057, 1257, 1273, 1713, 2240, 2259
DpnII GATC 7 cut(s) 14, 1055, 1255, 1271, 1711, 2238, 2257
DraI TTTAAA 1 cut(s) 342
EaeI YGGCCR 2 cut(s) 962, 2041
Eam1104I CTCTTC 5 cut(s) 269, 912, 1002, 1314, 1566
EarI CTCTTC 5 cut(s) 269, 912, 1002, 1314, 1566
Eco24I GRGCYC 1 cut(s) 102
Eco31I GGTCTC 1 cut(s) 119
Eco47I GGWCC 3 cut(s) 968, 1000, 1240
Eco57I CTGAAG 2 cut(s) 1793, 2027
Eco91I GGTNACC 2 cut(s) 1431, 1901
EcoNI CCTNNNNNAGG 1 cut(s) 2265
EcoO109I RGGNCCY 1 cut(s) 968
EcoO65I GGTNACC 2 cut(s) 1431, 1901
EcoRII CCWGG 3 cut(s) 1266, 1863, 2102
EcoT38I GRGCYC 1 cut(s) 102
Esp3I CGTCTC 2 cut(s) 169, 1045
FaeI CATG 3 cut(s) 1028, 1308, 1482
FaqI GGGAC 2 cut(s) 1687, 1827
FatI CATG 3 cut(s) 1024, 1304, 1478
FauI CCCGC 1 cut(s) 91
FblI GTMKAC 1 cut(s) 77
Fnu4HI GCNGC 5 cut(s) 774, 947, 1668, 1778, 1977
FokI GGATG 6 cut(s) 134, 257, 674, 764, 2196, 2213
FriOI GRGCYC 1 cut(s) 102
Fsp4HI GCNGC 5 cut(s) 774, 947, 1668, 1778, 1977
FspBI CTAG 7 cut(s) 95, 321, 624, 1230, 1575, 1758, 2057
GlaI GCGC 1 cut(s) 801
GluI GCNGC 5 cut(s) 774, 947, 1668, 1778, 1977
HaeIII GGCC 4 cut(s) 964, 2043, 2054, 2271
HapII CCGG 6 cut(s) 119, 172, 674, 749, 965, 1483
HgaI GACGC 2 cut(s) 1027, 1843
HhaI GCGC 1 cut(s) 802
Hin1I GRCGYC 1 cut(s) 1038
Hin1II CATG 3 cut(s) 1028, 1308, 1482
Hin6I GCGC 1 cut(s) 800
HinP1I GCGC 1 cut(s) 800
HincII GTYRAC 2 cut(s) 78, 733
HindII GTYRAC 2 cut(s) 78, 733
HpaI GTTAAC 1 cut(s) 733
HpaII CCGG 6 cut(s) 119, 172, 674, 749, 965, 1483
HphI GGTGA 6 cut(s) 30, 101, 479, 1053, 1425, 2206
Hpy166II GTNNAC 5 cut(s) 78, 92, 733, 1014, 1326
Hpy8I GTNNAC 5 cut(s) 78, 92, 733, 1014, 1326
Hpy99I CGWCG 2 cut(s) 79, 781
HpyAV CCTTC 8 cut(s) 628, 1102, 1426, 1728, 1735, 2002, 2029, 2167
HpyCH4III ACNGT 6 cut(s) 682, 737, 1346, 1623, 1841, 2153
HpyCH4IV ACGT 3 cut(s) 178, 1535, 1872
HpyF10VI GCNNNNNNNGC 3 cut(s) 782, 1396, 1976
HpyF3I CTNAG 6 cut(s) 69, 225, 285, 846, 2242, 2266
HpySE526I ACGT 3 cut(s) 178, 1535, 1872
Hsp92I GRCGYC 1 cut(s) 1038
Hsp92II CATG 3 cut(s) 1028, 1308, 1482
HspAI GCGC 1 cut(s) 800
KroI GCCGGC 1 cut(s) 1482
KroNI GCCGGC 1 cut(s) 1484
KspAI GTTAAC 1 cut(s) 733
Kzo9I GATC 7 cut(s) 14, 1055, 1255, 1271, 1711, 2238, 2257
LmnI GCTCC 5 cut(s) 136, 943, 1117, 1528, 2011
Lsp1109I GCAGC 5 cut(s) 760, 958, 1679, 1789, 1963
LweI GCATC 4 cut(s) 889, 1150, 1440, 2174
MaeI CTAG 7 cut(s) 95, 321, 624, 1230, 1575, 1758, 2057
MaeII ACGT 3 cut(s) 178, 1535, 1872
MalI GATC 7 cut(s) 16, 1057, 1257, 1273, 1713, 2240, 2259
MbiI CCGCTC 3 cut(s) 86, 114, 131
MboI GATC 7 cut(s) 14, 1055, 1255, 1271, 1711, 2238, 2257
MfeI CAATTG 1 cut(s) 1214
MflI RGATCY 5 cut(s) 1055, 1271, 1711, 2238, 2257
MhlI GDGCHC 1 cut(s) 102
MlsI TGGCCA 1 cut(s) 2043
MluNI TGGCCA 1 cut(s) 2043
MlyI GAGTC 4 cut(s) 73, 326, 464, 1012
MmeI TCCRAC 6 cut(s) 87, 1068, 1301, 1671, 1908, 2145
Mox20I TGGCCA 1 cut(s) 2043
MroNI GCCGGC 1 cut(s) 1482
MroXI GAANNNNTTC 1 cut(s) 835
MscI TGGCCA 1 cut(s) 2043
MslI CAYNNNNRTG 4 cut(s) 855, 897, 1583, 1649
Msp20I TGGCCA 1 cut(s) 2043
MspA1I CMGCKG 1 cut(s) 1780
MspI CCGG 6 cut(s) 119, 172, 674, 749, 965, 1483
MspR9I CCNGG 6 cut(s) 172, 749, 966, 1268, 1865, 2104
MunI CAATTG 1 cut(s) 1214
Mva1269I GAATGC 1 cut(s) 1159
MvaI CCWGG 3 cut(s) 1268, 1865, 2104
MvnI CGCG 1 cut(s) 21
MwoI GCNNNNNNNGC 3 cut(s) 782, 1396, 1976
NaeI GCCGGC 1 cut(s) 1484
NciI CCSGG 3 cut(s) 172, 749, 966
NdeII GATC 7 cut(s) 14, 1055, 1255, 1271, 1711, 2238, 2257
NgoMIV GCCGGC 1 cut(s) 1482
NlaIII CATG 3 cut(s) 1028, 1308, 1482
NlaIV GGNNCC 5 cut(s) 969, 1077, 1113, 2108, 2259
NmeAIII GCCGAG 1 cut(s) 2135
NmuCI GTSAC 7 cut(s) 220, 467, 857, 1346, 1431, 2194, 2216
NruI TCGCGA 1 cut(s) 21
NspI RCATGY 2 cut(s) 1028, 1482
OliI CACNNNNGTG 1 cut(s) 855
PaeI GCATGC 1 cut(s) 1482
PaqCI CACCTGC 2 cut(s) 643, 1985
PcsI WCGNNNNNNNCGW 1 cut(s) 184
PctI GAATGC 1 cut(s) 1159
PdiI GCCGGC 1 cut(s) 1484
PdmI GAANNNNTTC 1 cut(s) 835
PflFI GACNNNGTC 1 cut(s) 180
PkrI GCNGC 5 cut(s) 775, 948, 1669, 1779, 1978
PleI GAGTC 4 cut(s) 73, 325, 464, 1012
PpsI GAGTC 4 cut(s) 73, 325, 464, 1012
PpuMI RGGWCCY 1 cut(s) 968
PshBI ATTAAT 1 cut(s) 1542
Psp5II RGGWCCY 1 cut(s) 968
Psp6I CCWGG 3 cut(s) 1266, 1863, 2102
PspEI GGTNACC 2 cut(s) 1431, 1901
PspGI CCWGG 3 cut(s) 1266, 1863, 2102
PspN4I GGNNCC 5 cut(s) 969, 1077, 1113, 2108, 2259
PspPI GGNCC 4 cut(s) 968, 1000, 1240, 2053
PspPPI RGGWCCY 1 cut(s) 968
PstI CTGCAG 1 cut(s) 2088
PstNI CAGNNNCTG 1 cut(s) 1771
PsuI RGATCY 5 cut(s) 1055, 1271, 1711, 2238, 2257
PsyI GACNNNGTC 1 cut(s) 180
PvuII CAGCTG 1 cut(s) 1780
RruI TCGCGA 1 cut(s) 21
RsaI GTAC 2 cut(s) 91, 1013
RsaNI GTAC 2 cut(s) 90, 1012
RseI CAYNNNNRTG 4 cut(s) 855, 897, 1583, 1649
SalI GTCGAC 1 cut(s) 76
SatI GCNGC 5 cut(s) 774, 947, 1668, 1778, 1977
Sau3AI GATC 7 cut(s) 14, 1055, 1255, 1271, 1711, 2238, 2257
Sau96I GGNCC 4 cut(s) 968, 1000, 1240, 2053
SchI GAGTC 4 cut(s) 73, 326, 464, 1012
ScrFI CCNGG 6 cut(s) 172, 749, 966, 1268, 1865, 2104
SduI GDGCHC 1 cut(s) 102
SfaNI GCATC 4 cut(s) 889, 1150, 1440, 2174
SfcI CTRYAG 2 cut(s) 1971, 2084
SinI GGWCC 3 cut(s) 968, 1000, 1240
SmiMI CAYNNNNRTG 4 cut(s) 855, 897, 1583, 1649
SmlI CTYRAG 1 cut(s) 903
SmoI CTYRAG 1 cut(s) 903
SphI GCATGC 1 cut(s) 1482
SsiI CCGC 8 cut(s) 84, 112, 129, 479, 1022, 1390, 1709, 1992
SspMI CTAG 7 cut(s) 95, 321, 624, 1230, 1575, 1758, 2057
StyD4I CCNGG 6 cut(s) 170, 747, 964, 1266, 1863, 2102
TaaI ACNGT 6 cut(s) 682, 737, 1346, 1623, 1841, 2153
TaiI ACGT 3 cut(s) 181, 1538, 1875
TaqI TCGA 9 cut(s) 13, 77, 297, 336, 693, 720, 808, 954, 2145
TaqII GACCGA 2 cut(s) 1017, 1328
TatI WGTACW 1 cut(s) 1011
TscAI CASTG 6 cut(s) 73, 229, 742, 1333, 1388, 1966
TseFI GTSAC 7 cut(s) 220, 467, 857, 1346, 1431, 2194, 2216
TseI GCWGC 5 cut(s) 773, 946, 1667, 1777, 1976
Tsp45I GTSAC 7 cut(s) 220, 467, 857, 1346, 1431, 2194, 2216
TspDTI ATGAA 9 cut(s) 168, 261, 429, 717, 1001, 1587, 1667, 1980, 2145
TspGWI ACGGA 1 cut(s) 2213
TspRI CASTG 6 cut(s) 73, 229, 742, 1333, 1388, 1966
Tth111I GACNNNGTC 1 cut(s) 180
VpaK11BI GGWCC 3 cut(s) 968, 1000, 1240
VspI ATTAAT 1 cut(s) 1542
XagI CCTNNNNNAGG 1 cut(s) 2265
XapI RAATTY 1 cut(s) 1284
XceI RCATGY 2 cut(s) 1028, 1482
XcmI CCANNNNNNNNNTGG 2 cut(s) 1302, 1360
XmiI GTMKAC 1 cut(s) 77
XmnI GAANNNNTTC 1 cut(s) 835
XspI CTAG 7 cut(s) 95, 321, 624, 1230, 1575, 1758, 2057
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.