Leucine-rich repeats, outliers
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G06040 |
| fragaria_vesca | FvH4_1g08600 FvH4_1g08600 FvH4_1g08610 FvH4_1g08610 |
| malus_domestica | MD02G1090200.v1.1 MD02G1090300.v1.1 MD02G1090400.v1.1 MD15G1216800.v1.1 MD15G1217000.v1.1 |
| prunus_persica | Prupe.7G199500_v2.0.a1 Prupe.7G199600_v2.0.a1 Prupe.7G199800_v2.0.a1 Prupe.7G199800_v2.0.a1 |
| pyrus_communis | pycom02g07210 pycom02g07220 pycom02g07230 pycom15g19230 pycom15g19240 |
| rosa_chinensis | RchiOBHm_Chr2g0093971 RchiOBHm_Chr2g0094821 RchiOBHm_Chr2g0094831 RchiOBHm_Chr5g0043671 |
| rosa_laevigata | RLG00000016524 |
| rosa_multiflora | Rmu_sc0003027.1_g000001 Rmu_sc0006422.1_g000027 Rmu_sc0018486.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00075090 Rroxscaffold_2G00146830 Rroxscaffold_2G00146840 |
| rosa_rugosa | Rorug02G0047100 Rorug02G0047100 Rorug02G0054500 Rorug02G0054600 Rorug02G0054700 |
| rosa_samantha | Rh2AG094700 Rh2AG094800 Rh2BG095300 Rh2BG095400 Rh2CG097100 Rh2CG097200 Rh2CG097300 Rh2DG094100 Rh2DG094200 Rh7BG370500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 4053 |
| Acc36I | ACCTGC | 1 cut(s) | 1405 |
| Acc65I | GGTACC | 1 cut(s) | 3216 |
| AccB1I | GGYRCC | 6 cut(s) | 1548, 2454, 2629, 3216, 3971, 4000 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2677 |
| AccII | CGCG | 4 cut(s) | 19, 64, 2756, 3718 |
| AclWI | GGATC | 8 cut(s) | 1232, 1443, 1453, 1627, 1960, 2451, 2630, 2909 |
| AcoI | YGGCCR | 3 cut(s) | 2110, 2563, 3354 |
| AcuI | CTGAAG | 6 cut(s) | 2531, 2670, 2847, 4163, 4314, 4392 |
| AcyI | GRCGYC | 1 cut(s) | 44 |
| AdeI | CACNNNGTG | 2 cut(s) | 1078, 3143 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 63, 294, 1776, 2677, 3226, 3263 |
| AflII | CTTAAG | 1 cut(s) | 1639 |
| AflIII | ACRYGT | 1 cut(s) | 2965 |
| AgeI | ACCGGT | 1 cut(s) | 2768 |
| AjiI | CACGTC | 1 cut(s) | 3481 |
| AjnI | CCWGG | 9 cut(s) | 643, 1205, 1306, 2331, 2478, 3247, 3269, 3651, 4219 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 527, 559, 740, 772, 977, 1009 |
| AleI | CACNNNNGTG | 2 cut(s) | 4022, 4451 |
| Alw21I | GWGCWC | 5 cut(s) | 1858, 1907, 3583, 3616, 4485 |
| Alw26I | GTCTC | 4 cut(s) | 260, 266, 1161, 2763 |
| Alw44I | GTGCAC | 1 cut(s) | 1854 |
| AlwI | GGATC | 8 cut(s) | 1232, 1443, 1453, 1627, 1960, 2451, 2630, 2909 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2648, 4220 |
| Ama87I | CYCGRG | 3 cut(s) | 101, 278, 1242 |
| ApaLI | GTGCAC | 1 cut(s) | 1854 |
| AseI | ATTAAT | 2 cut(s) | 1995, 3944 |
| AsiGI | ACCGGT | 1 cut(s) | 2768 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1191, 4271 |
| Asp718I | GGTACC | 1 cut(s) | 3216 |
| AspLEI | GCGC | 2 cut(s) | 1740, 2206 |
| AsuC2I | CCSGG | 3 cut(s) | 404, 2058, 2809 |
| AsuII | TTCGAA | 3 cut(s) | 269, 1602, 4154 |
| AvaI | CYCGRG | 3 cut(s) | 101, 278, 1242 |
| AvaII | GGWCC | 4 cut(s) | 813, 1310, 3266, 4585 |
| AxyI | CCTNAGG | 2 cut(s) | 1272, 2577 |
| BaeGI | GKGCMC | 1 cut(s) | 1858 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2843, 2876 |
| BalI | TGGCCA | 3 cut(s) | 2112, 2565, 3356 |
| BanI | GGYRCC | 6 cut(s) | 1548, 2454, 2629, 3216, 3971, 4000 |
| BanII | GRGCYC | 4 cut(s) | 227, 3583, 3616, 3844 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1573, 1605 |
| BauI | CACGAG | 1 cut(s) | 2106 |
| BbsI | GAAGAC | 1 cut(s) | 3604 |
| Bbv12I | GWGCWC | 5 cut(s) | 1858, 1907, 3583, 3616, 4485 |
| BbvCI | CCTCAGC | 2 cut(s) | 372, 1961 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4455, 4489 |
| BciT130I | CCWGG | 9 cut(s) | 645, 1207, 1308, 2333, 2480, 3249, 3271, 3653, 4221 |
| BciVI | GTATCC | 1 cut(s) | 4141 |
| BclI | TGATCA | 1 cut(s) | 4407 |
| BcnI | CCSGG | 3 cut(s) | 404, 2058, 2809 |
| BcoDI | GTCTC | 4 cut(s) | 260, 266, 1161, 2763 |
| BfaI | CTAG | 8 cut(s) | 1086, 1137, 1578, 2213, 2241, 2733, 2895, 4037 |
| BfmI | CTRYAG | 9 cut(s) | 861, 1718, 2640, 3081, 3234, 3363, 3487, 4437, 4559 |
| BfoI | RGCGCY | 1 cut(s) | 1741 |
| BfrI | CTTAAG | 1 cut(s) | 1639 |
| BfuAI | ACCTGC | 1 cut(s) | 1405 |
| BfuI | GTATCC | 1 cut(s) | 4141 |
| BglII | AGATCT | 2 cut(s) | 1883, 2937 |
| BlpI | GCTNAGC | 3 cut(s) | 639, 3848, 4484 |
| BmcAI | AGTACT | 2 cut(s) | 1716, 2737 |
| Bme18I | GGWCC | 4 cut(s) | 813, 1310, 3266, 4585 |
| BmeT110I | CYCGRG | 3 cut(s) | 101, 278, 1242 |
| BmgBI | CACGTC | 1 cut(s) | 3481 |
| BmrI | ACTGGG | 1 cut(s) | 1420 |
| BmuI | ACTGGG | 1 cut(s) | 1420 |
| BpiI | GAAGAC | 1 cut(s) | 3604 |
| BpmI | CTGGAG | 2 cut(s) | 2364, 3635 |
| Bpu10I | CCTNAGC | 4 cut(s) | 372, 1771, 1961, 3105 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 639, 3848, 4484 |
| Bpu14I | TTCGAA | 3 cut(s) | 269, 1602, 4154 |
| BpuEI | CTTGAG | 5 cut(s) | 1544, 1906, 3101, 3115, 3836 |
| BpuMI | CCSGG | 3 cut(s) | 404, 2058, 2809 |
| BsaBI | GATNNNNATC | 1 cut(s) | 4245 |
| BsaHI | GRCGYC | 1 cut(s) | 44 |
| BsaJI | CCNNGG | 8 cut(s) | 279, 2478, 2479, 2875, 3269, 3270, 4023, 4101 |
| BsaWI | WCCGGW | 5 cut(s) | 233, 815, 929, 2768, 4537 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 124, 154, 244, 274, 327, 357, 2033, 2063 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 63, 294, 1776, 2677, 3226, 3263 |
| Bse118I | RCCGGY | 2 cut(s) | 565, 2768 |
| Bse1I | ACTGG | 7 cut(s) | 1415, 1900, 3039, 3183, 3268, 3566, 3859 |
| Bse21I | CCTNAGG | 2 cut(s) | 1272, 2577 |
| Bse3DI | GCAATG | 3 cut(s) | 1067, 1466, 3110 |
| Bse8I | GATNNNNATC | 1 cut(s) | 4245 |
| BseBI | CCWGG | 9 cut(s) | 645, 1207, 1308, 2333, 2480, 3249, 3271, 3653, 4221 |
| BseDI | CCNNGG | 8 cut(s) | 279, 2478, 2479, 2875, 3269, 3270, 4023, 4101 |
| BseJI | GATNNNNATC | 1 cut(s) | 4245 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 63, 294, 1776, 2677, 3226, 3263 |
| BseMI | GCAATG | 3 cut(s) | 1067, 1466, 3110 |
| BseNI | ACTGG | 7 cut(s) | 1415, 1900, 3039, 3183, 3268, 3566, 3859 |
| BseRI | GAGGAG | 8 cut(s) | 389, 458, 461, 539, 750, 1017, 1260, 1268 |
| BseSI | GKGCMC | 1 cut(s) | 1858 |
| BsgI | GTGCAG | 4 cut(s) | 1860, 3364, 3699, 3915 |
| Bsh1236I | CGCG | 4 cut(s) | 19, 64, 2756, 3718 |
| Bsh1285I | CGRYCG | 1 cut(s) | 623 |
| BshNI | GGYRCC | 6 cut(s) | 1548, 2454, 2629, 3216, 3971, 4000 |
| BshTI | ACCGGT | 1 cut(s) | 2768 |
| BsiEI | CGRYCG | 1 cut(s) | 623 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1858, 1907, 3583, 3616, 4485 |
| BsiHKCI | CYCGRG | 3 cut(s) | 101, 278, 1242 |
| BslFI | GGGAC | 4 cut(s) | 1211, 1296, 1798, 3252 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 63, 294, 1776, 2677, 3226, 3263 |
| BsmAI | GTCTC | 4 cut(s) | 260, 266, 1161, 2763 |
| BsmBI | CGTCTC | 2 cut(s) | 266, 2763 |
| BsmFI | GGGAC | 4 cut(s) | 1211, 1296, 1798, 3252 |
| BsmI | GAATGC | 4 cut(s) | 1507, 2327, 2870, 3561 |
| BsoBI | CYCGRG | 3 cut(s) | 101, 278, 1242 |
| Bsp119I | TTCGAA | 3 cut(s) | 269, 1602, 4154 |
| Bsp1286I | GDGCHC | 7 cut(s) | 227, 1858, 1907, 3583, 3616, 3844, 4485 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 639, 3848, 4484 |
| BspFNI | CGCG | 4 cut(s) | 19, 64, 2756, 3718 |
| BspHI | TCATGA | 2 cut(s) | 3285, 3642 |
| BspMAI | CTGCAG | 2 cut(s) | 2644, 4563 |
| BspMI | ACCTGC | 1 cut(s) | 1405 |
| BspPI | GGATC | 8 cut(s) | 1232, 1443, 1453, 1627, 1960, 2451, 2630, 2909 |
| BspQI | GCTCTTC | 1 cut(s) | 707 |
| BspT104I | TTCGAA | 3 cut(s) | 269, 1602, 4154 |
| BspT107I | GGYRCC | 6 cut(s) | 1548, 2454, 2629, 3216, 3971, 4000 |
| BspTI | CTTAAG | 1 cut(s) | 1639 |
| BsrDI | GCAATG | 3 cut(s) | 1067, 1466, 3110 |
| BsrFI | RCCGGY | 2 cut(s) | 565, 2768 |
| BsrI | ACTGG | 7 cut(s) | 1415, 1900, 3039, 3183, 3268, 3566, 3859 |
| BssAI | RCCGGY | 2 cut(s) | 565, 2768 |
| BssECI | CCNNGG | 8 cut(s) | 279, 2478, 2479, 2875, 3269, 3270, 4023, 4101 |
| BssNI | GRCGYC | 1 cut(s) | 44 |
| BssSI | CACGAG | 1 cut(s) | 2106 |
| BssT1I | CCWWGG | 1 cut(s) | 4101 |
| Bst2BI | CACGAG | 1 cut(s) | 2106 |
| Bst2UI | CCWGG | 9 cut(s) | 645, 1207, 1308, 2333, 2480, 3249, 3271, 3653, 4221 |
| BstACI | GRCGYC | 1 cut(s) | 44 |
| BstAFI | CTTAAG | 1 cut(s) | 1639 |
| BstBI | TTCGAA | 3 cut(s) | 269, 1602, 4154 |
| BstC8I | GCNNGC | 7 cut(s) | 90, 617, 1134, 1793, 1907, 3024, 3934 |
| BstDSI | CCRYGG | 1 cut(s) | 4023 |
| BstEII | GGTNACC | 1 cut(s) | 406 |
| BstFNI | CGCG | 4 cut(s) | 19, 64, 2756, 3718 |
| BstH2I | RGCGCY | 1 cut(s) | 1741 |
| BstHHI | GCGC | 2 cut(s) | 1740, 2206 |
| BstMAI | GTCTC | 4 cut(s) | 260, 266, 1161, 2763 |
| BstMCI | CGRYCG | 1 cut(s) | 623 |
| BstNI | CCWGG | 9 cut(s) | 645, 1207, 1308, 2333, 2480, 3249, 3271, 3653, 4221 |
| BstNSI | RCATGY | 2 cut(s) | 1830, 2969 |
| BstPI | GGTNACC | 1 cut(s) | 406 |
| BstSFI | CTRYAG | 9 cut(s) | 861, 1718, 2640, 3081, 3234, 3363, 3487, 4437, 4559 |
| BstSLI | GKGCMC | 1 cut(s) | 1858 |
| BstUI | CGCG | 4 cut(s) | 19, 64, 2756, 3718 |
| BstV2I | GAAGAC | 1 cut(s) | 3604 |
| BstX2I | RGATCY | 3 cut(s) | 1883, 2443, 2937 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 4453 |
| BstYI | RGATCY | 3 cut(s) | 1883, 2443, 2937 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1272, 2577 |
| BsuI | GTATCC | 1 cut(s) | 4141 |
| BtgI | CCRYGG | 1 cut(s) | 4023 |
| BtrI | CACGTC | 1 cut(s) | 3481 |
| BtsI | GCAGTG | 3 cut(s) | 1697, 3357, 3927 |
| BveI | ACCTGC | 1 cut(s) | 1405 |
| Cac8I | GCNNGC | 7 cut(s) | 90, 617, 1134, 1793, 1907, 3024, 3934 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2648, 4220 |
| CciI | TCATGA | 2 cut(s) | 3285, 3642 |
| CfoI | GCGC | 2 cut(s) | 1740, 2206 |
| Cfr10I | RCCGGY | 2 cut(s) | 565, 2768 |
| CseI | GACGC | 3 cut(s) | 52, 2745, 4518 |
| CsiI | ACCWGGT | 1 cut(s) | 3247 |
| CspAI | ACCGGT | 1 cut(s) | 2768 |
| DraI | TTTAAA | 1 cut(s) | 1977 |
| DraIII | CACNNNGTG | 2 cut(s) | 1078, 3143 |
| EaeI | YGGCCR | 3 cut(s) | 2110, 2563, 3354 |
| EciI | GGCGGA | 3 cut(s) | 132, 265, 277 |
| Ecl136II | GAGCTC | 2 cut(s) | 3581, 3614 |
| Eco130I | CCWWGG | 1 cut(s) | 4101 |
| Eco24I | GRGCYC | 4 cut(s) | 227, 3583, 3616, 3844 |
| Eco32I | GATATC | 2 cut(s) | 556, 2252 |
| Eco47I | GGWCC | 4 cut(s) | 813, 1310, 3266, 4585 |
| Eco53kI | GAGCTC | 2 cut(s) | 3581, 3614 |
| Eco57I | CTGAAG | 6 cut(s) | 2531, 2670, 2847, 4163, 4314, 4392 |
| Eco81I | CCTNAGG | 2 cut(s) | 1272, 2577 |
| Eco88I | CYCGRG | 3 cut(s) | 101, 278, 1242 |
| Eco91I | GGTNACC | 1 cut(s) | 406 |
| EcoICRI | GAGCTC | 2 cut(s) | 3581, 3614 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1374, 2476 |
| EcoO65I | GGTNACC | 1 cut(s) | 406 |
| EcoRI | GAATTC | 3 cut(s) | 1762, 3754, 4156 |
| EcoRII | CCWGG | 9 cut(s) | 643, 1205, 1306, 2331, 2478, 3247, 3269, 3651, 4219 |
| EcoRV | GATATC | 2 cut(s) | 556, 2252 |
| EcoT14I | CCWWGG | 1 cut(s) | 4101 |
| EcoT38I | GRGCYC | 4 cut(s) | 227, 3583, 3616, 3844 |
| ErhI | CCWWGG | 1 cut(s) | 4101 |
| Esp3I | CGTCTC | 2 cut(s) | 266, 2763 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 589, 621 |
| FaqI | GGGAC | 4 cut(s) | 1211, 1296, 1798, 3252 |
| FauI | CCCGC | 3 cut(s) | 12, 39, 3031 |
| FauNDI | CATATG | 2 cut(s) | 3018, 3726 |
| FbaI | TGATCA | 1 cut(s) | 4407 |
| FriOI | GRGCYC | 4 cut(s) | 227, 3583, 3616, 3844 |
| FspBI | CTAG | 8 cut(s) | 1086, 1137, 1578, 2213, 2241, 2733, 2895, 4037 |
| GlaI | GCGC | 2 cut(s) | 1739, 2205 |
| GsuI | CTGGAG | 2 cut(s) | 2364, 3635 |
| HaeII | RGCGCY | 1 cut(s) | 1741 |
| HgaI | GACGC | 3 cut(s) | 52, 2745, 4518 |
| HhaI | GCGC | 2 cut(s) | 1740, 2206 |
| Hin1I | GRCGYC | 1 cut(s) | 44 |
| Hin6I | GCGC | 2 cut(s) | 1738, 2204 |
| HinP1I | GCGC | 2 cut(s) | 1738, 2204 |
| HincII | GTYRAC | 3 cut(s) | 1659, 2218, 2805 |
| HindII | GTYRAC | 3 cut(s) | 1659, 2218, 2805 |
| HindIII | AAGCTT | 1 cut(s) | 2428 |
| Hpy99I | CGWCG | 2 cut(s) | 46, 4235 |
| HpyCH4IV | ACGT | 1 cut(s) | 3480 |
| HpySE526I | ACGT | 1 cut(s) | 3480 |
| Hsp92I | GRCGYC | 1 cut(s) | 44 |
| HspAI | GCGC | 2 cut(s) | 1738, 2204 |
| KpnI | GGTACC | 1 cut(s) | 3220 |
| Ksp22I | TGATCA | 1 cut(s) | 4407 |
| LguI | GCTCTTC | 1 cut(s) | 707 |
| LmnI | GCTCC | 7 cut(s) | 1004, 1346, 2125, 2908, 3578, 3611, 4235 |
| MabI | ACCWGGT | 1 cut(s) | 3247 |
| MaeI | CTAG | 8 cut(s) | 1086, 1137, 1578, 2213, 2241, 2733, 2895, 4037 |
| MaeII | ACGT | 1 cut(s) | 3480 |
| MfeI | CAATTG | 3 cut(s) | 888, 1786, 2881 |
| MflI | RGATCY | 3 cut(s) | 1883, 2443, 2937 |
| MhlI | GDGCHC | 7 cut(s) | 227, 1858, 1907, 3583, 3616, 3844, 4485 |
| MlsI | TGGCCA | 3 cut(s) | 2112, 2565, 3356 |
| MluNI | TGGCCA | 3 cut(s) | 2112, 2565, 3356 |
| MlyI | GAGTC | 6 cut(s) | 113, 262, 2599, 2737, 4382, 4537 |
| MmeI | TCCRAC | 4 cut(s) | 436, 525, 979, 2694 |
| Mox20I | TGGCCA | 3 cut(s) | 2112, 2565, 3356 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1191, 4271 |
| MscI | TGGCCA | 3 cut(s) | 2112, 2565, 3356 |
| MslI | CAYNNNNRTG | 6 cut(s) | 2594, 3290, 3675, 4022, 4280, 4451 |
| Msp20I | TGGCCA | 3 cut(s) | 2112, 2565, 3356 |
| MspA1I | CMGCKG | 1 cut(s) | 2648 |
| MspCI | CTTAAG | 1 cut(s) | 1639 |
| MunI | CAATTG | 3 cut(s) | 888, 1786, 2881 |
| Mva1269I | GAATGC | 4 cut(s) | 1507, 2327, 2870, 3561 |
| MvaI | CCWGG | 9 cut(s) | 645, 1207, 1308, 2333, 2480, 3249, 3271, 3653, 4221 |
| MvnI | CGCG | 4 cut(s) | 19, 64, 2756, 3718 |
| NciI | CCSGG | 3 cut(s) | 404, 2058, 2809 |
| NdeI | CATATG | 2 cut(s) | 3018, 3726 |
| NmeAIII | GCCGAG | 2 cut(s) | 2294, 3823 |
| NmuCI | GTSAC | 6 cut(s) | 406, 2075, 2984, 3524, 3920, 4540 |
| NspI | RCATGY | 2 cut(s) | 1830, 2969 |
| NspV | TTCGAA | 3 cut(s) | 269, 1602, 4154 |
| OliI | CACNNNNGTG | 2 cut(s) | 4022, 4451 |
| PaeR7I | CTCGAG | 1 cut(s) | 1242 |
| PagI | TCATGA | 2 cut(s) | 3285, 3642 |
| PasI | CCCWGGG | 2 cut(s) | 2479, 3270 |
| PciI | ACATGT | 1 cut(s) | 2965 |
| PciSI | GCTCTTC | 1 cut(s) | 707 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1228 |
| PctI | GAATGC | 4 cut(s) | 1507, 2327, 2870, 3561 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1191, 4271 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2677 |
| PfoI | TCCNGGA | 2 cut(s) | 2331, 3651 |
| PinAI | ACCGGT | 1 cut(s) | 2768 |
| Ple19I | CGATCG | 1 cut(s) | 623 |
| PleI | GAGTC | 6 cut(s) | 112, 261, 2599, 2736, 4382, 4537 |
| PpsI | GAGTC | 6 cut(s) | 112, 261, 2599, 2736, 4382, 4537 |
| PscI | ACATGT | 1 cut(s) | 2965 |
| PshBI | ATTAAT | 2 cut(s) | 1995, 3944 |
| PsiI | TTATAA | 1 cut(s) | 4053 |
| Psp124BI | GAGCTC | 2 cut(s) | 3583, 3616 |
| Psp6I | CCWGG | 9 cut(s) | 643, 1205, 1306, 2331, 2478, 3247, 3269, 3651, 4219 |
| PspEI | GGTNACC | 1 cut(s) | 406 |
| PspGI | CCWGG | 9 cut(s) | 643, 1205, 1306, 2331, 2478, 3247, 3269, 3651, 4219 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2828, 2860 |
| PstI | CTGCAG | 2 cut(s) | 2644, 4563 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2648, 4220 |
| PsuI | RGATCY | 3 cut(s) | 1883, 2443, 2937 |
| PvuI | CGATCG | 1 cut(s) | 623 |
| PvuII | CAGCTG | 1 cut(s) | 2648 |
| RseI | CAYNNNNRTG | 6 cut(s) | 2594, 3290, 3675, 4022, 4280, 4451 |
| SacI | GAGCTC | 2 cut(s) | 3583, 3616 |
| SapI | GCTCTTC | 1 cut(s) | 707 |
| ScaI | AGTACT | 2 cut(s) | 1716, 2737 |
| SchI | GAGTC | 6 cut(s) | 113, 262, 2599, 2737, 4382, 4537 |
| SduI | GDGCHC | 7 cut(s) | 227, 1858, 1907, 3583, 3616, 3844, 4485 |
| SexAI | ACCWGGT | 1 cut(s) | 3247 |
| SfcI | CTRYAG | 9 cut(s) | 861, 1718, 2640, 3081, 3234, 3363, 3487, 4437, 4559 |
| Sfr274I | CTCGAG | 1 cut(s) | 1242 |
| SfuI | TTCGAA | 3 cut(s) | 269, 1602, 4154 |
| SinI | GGWCC | 4 cut(s) | 813, 1310, 3266, 4585 |
| SlaI | CTCGAG | 1 cut(s) | 1242 |
| SmiI | ATTTAAAT | 1 cut(s) | 1977 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 2594, 3290, 3675, 4022, 4280, 4451 |
| SmlI | CTYRAG | 7 cut(s) | 1242, 1523, 1639, 1921, 3094, 3116, 3815 |
| SmoI | CTYRAG | 7 cut(s) | 1242, 1523, 1639, 1921, 3094, 3116, 3815 |
| SspI | AATATT | 1 cut(s) | 2377 |
| SspMI | CTAG | 8 cut(s) | 1086, 1137, 1578, 2213, 2241, 2733, 2895, 4037 |
| SstI | GAGCTC | 2 cut(s) | 3583, 3616 |
| StyI | CCWWGG | 1 cut(s) | 4101 |
| SwaI | ATTTAAAT | 1 cut(s) | 1977 |
| TaiI | ACGT | 1 cut(s) | 3483 |
| TaqI | TCGA | 9 cut(s) | 269, 1243, 1296, 1602, 1929, 3503, 3892, 4154, 4475 |
| TaqII | GACCGA | 1 cut(s) | 1767 |
| TatI | WGTACW | 5 cut(s) | 963, 1714, 2735, 3568, 3806 |
| TauI | GCSGC | 7 cut(s) | 49, 67, 148, 247, 250, 2975, 3182 |
| TseFI | GTSAC | 6 cut(s) | 406, 2075, 2984, 3524, 3920, 4540 |
| Tsp45I | GTSAC | 6 cut(s) | 406, 2075, 2984, 3524, 3920, 4540 |
| TspGWI | ACGGA | 6 cut(s) | 97, 248, 3899, 4012, 4083, 4248 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2677 |
| Vha464I | CTTAAG | 1 cut(s) | 1639 |
| VneI | GTGCAC | 1 cut(s) | 1854 |
| VpaK11BI | GGWCC | 4 cut(s) | 813, 1310, 3266, 4585 |
| VspI | ATTAAT | 2 cut(s) | 1995, 3944 |
| XbaI | TCTAGA | 1 cut(s) | 1577 |
| XceI | RCATGY | 2 cut(s) | 1830, 2969 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3982 |
| XhoI | CTCGAG | 1 cut(s) | 1242 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1191, 4271 |
| XspI | CTAG | 8 cut(s) | 1086, 1137, 1578, 2213, 2241, 2733, 2895, 4037 |
| ZrmI | AGTACT | 2 cut(s) | 1716, 2737 |