MD15G1216800.v1.1

Leucine-rich repeats, outliers

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0002012
Physical Location & Seq
Forward (+)
17487703 .. 17492271
4569 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1216800.v1.1.491

Sequence Viewer

Length: 2703 bp
ATGACGGTTCTTAGGTCCTGCGACATTGCCTCCCCCAAAACGACGCCGCCTAAGTCCAAGACTCGGCTCAAATTAGAGCCCCCCACGCCAGCCCAGACCCACGAGTCCCCCACTCCTCCACCTACCACTTCGACCTCCTTCTCCTACCAACCCCGAAACCCTAACCCTAATTTTGGCCCCAATCCCCAAAAAGGATCTCTCGGGTTGGGCTCCGGTTCGGTCCCTGTCTCGGGAGGAGTGATGCGGCGGCGGAGTATACGTCTCGCTTCCAAGTCTCCGGGTTCTGCCGAGATGGTGGCCAGAGGGGGCGGCGGGGAAGAAGGTGACGATCGTGATTCGAATGGAGAGGTGGGTTTTAATCTGTTTGGGAAGAGGATTATGGTTTCGGGAGTTGAGGAAGGGACTGAGGAGTTGAAATTGGTTTCTGGAGGACAGGAGAAGGTAGAAATTCGAGAGGGTAAGAGGGGTTTGGTAGAATTAGGGCTGAGTTATGATTTAGGGATTTTGAGGGATTGCGGTGAGAAGAAAAGGAAGTTGGAGATCGATATTAATTTTCCGGCTTCCGAATGTGAAGGGGAGGATGGAGCGAGTACGCCGTTTTTGAGTCTGCGGTCAGGGAAGAAAGTGACGAAACGGGGTGTGGATGGTGGTAGTAATGGAGCTATGGTGATTGATTTAGATGCTGATGAGCATGGTACCGTGACTAGGGAAGATGAAGTTGGAAGAGGAGAGAGAGCGAAGAGAAAGTTGGGGGAGAGTGGTTCTGTAGTCAATGGTGTCGATGTGGTGGAGTTGGATTCGGATTCGGACTCGGACGCGGAGAGGGCAAGTGAGAACGTGTTGAAGAGTAGTAATCCAAAAGGGAAGATGAAGTTGAGTGATGTGATCGAAGACTTCGAAGGCGACCCGACTCCCAGTGAGAATGGTACAGAAAAGGGCAGAAGGAGATACAGCAGCAAAGAAAAAGGAAAAGGGAAATTGGTTGGAGAAGCGGTTTTATTGAGTGGTAACGATGAAGTTGAATTGGGTGTGAAATCAGAAGGTTTTAGTTCAGTTGACAATGTGTTTACGGTTCCTATTCATATAGGAGATAATGTAGCAGTGGACAATGTATTTTCGTCTCAGATTCATATGGAAGAAAATGTTGCATTGCACGATCAAGGGCAGGTAAATAACAGTAACACTAATACAAGAGAGAATGTATCAGATGGAAACGTATACATGGAGCGGTTTCGCGAAATAGCTAGGCGAAATGCAGCTCGATTTGCATACTTTTCTGCTGAAGAGGAACAGGTGAATCATTTGCCTCCTGATGCTGAAGTGGCACAGGATATCGAAGATTGGCCTGGTCCCTTCTCTACGGCCATGAAAATTATTAAGGATCGAGCAGAAAAAGATGTGCCAGTGCCCTCTAACAAGACCAAACAATCATCAGTGAATTGGGTTCCTAAGAAGTTTCCAGATCGTCCCCTCCCAAAGATTTTGGTCCCCTCACTGCAAGATCTGTGTTTGTTGGTTCTCGCTAAGAATGCTGATGCAATTGTTTCACTTGACCACGTGGCAGATGCTTTGAGGCACCGGCTAAGTCAGATGCTTTGTGATTCTCGAAAAATGAACAGTCATTTATTCGAGCTTTTTGTTCAGGGATCTCCAACAGAGGTTCGGTTACGGGATTGCTCATGGATGACAGAGGAGCAGTTTAAAGACTCTTTTCAGCAGTGCGACACCACCAATTTAACAGTGCTACAACTTGATCAGTGTGGGCGCTGTATGCCAGATTATATATTGCATTCTACTTTAGCTCGGTCATCAAATTGCTTGCCTAACCTAGTCACTTTATCCCTAAGTGGTGCGTGCCGTCTTTCGGATATTGGGCTTGGTGAACTTATATCTTCTGCCCCGGCACTAAGATCTCTAAACCTCAGCCAGTGCTCTCTTCTCACTTACTCGAGTATTAGCACTTTAGCTGATTCATTGGGATCAGTTCTGAAGGAACTTTATCTAAATGATTGCCAGGGCATTGATGCTATGCTTATGCTACCAGCACTCAAGAAGCTTGAGCGTTTGGAGGTTTTTTCGCTAGCAGGCTTTGAAAATGTTTATGACAGTTTTATTAGAGAATTTATTACAGCTTGTGGTCACAGTTTGAAGGAGCTTGTTCTGACTGATTGTGTAAAATTAACAGATTCTTCTGTGAAAGTGATAGCTGAAACCTGTTCGGGATTATGTGTACTTGACCTTGCTAACTTGAACAAATTGACTGATTCTACTTTAGGATATCTTGCAAATGGTTGCCGAGCAATTCAAACATTAAATTTTCGTCGGAATCCATTCAGTGATGAAGCCATTGCTGCATTCCTGGAAACTTCTGGAGAATGCTTACAGGAACTTTCAGTAAATCATATCCAGATGGTCGGCCACAACACAGCCGTATCACTTGCCAAACGGTCAAGGATGTTGCATACCCTAGATCTATCATGGTGCCGGAATATTACAGATGAGGCCCTGGGTTTAATCGTGGACAGCTGCCTATCACTGAGAATACTAAAACTTGTTGGATGCACCCAGATCACAGATACTTTTCTGGATGGACACTCAAATCCAGAGGTGAGAATCATTGGCTTGAAATTTTCTCCGATACTGGAACATCTCAAGGTCCCCAATCCTCACGAAGGTCCATTGCGTTATTCCGCCGTCTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_6

Protein Analysis

901

Amino Acids

98.15

Weight (kDa)

5.39

Isoelectric Point (pI)

46.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7885 PF25372 725 - 873 5.7e-07 Leucine Rich Repeat Domain of unknown function (DUF7885)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 103
Acc36I ACCTGC 1 cut(s) 1156
Acc65I GGTACC 1 cut(s) 695
AccB1I GGYRCC 3 cut(s) 695, 1575, 2481
AccBSI CCGCTC 1 cut(s) 1228
AccI GTMKAC 2 cut(s) 256, 1218
AccII CGCG 2 cut(s) 818, 1236
AclWI GGATC 4 cut(s) 202, 1389, 1654, 1987
AcoI YGGCCR 3 cut(s) 297, 1362, 2416
AcsI RAATTY 4 cut(s) 447, 2120, 2314, 2627
AcuI CTGAAG 3 cut(s) 1302, 1338, 2009
AcvI CACGTG 1 cut(s) 1558
AcyI GRCGYC 1 cut(s) 44
AfaI GTAC 4 cut(s) 592, 697, 928, 2232
AfiI CCNNNNNNNGG 8 cut(s) 63, 173, 191, 229, 230, 705, 1864, 2672
AflIII ACRYGT 1 cut(s) 837
AgsI TTSAA 8 cut(s) 415, 844, 1022, 2093, 2149, 2251, 2306, 2626
AjnI CCWGG 4 cut(s) 1345, 2013, 2358, 2505
AjuI GAANNNNNNNTTGG 6 cut(s) 518, 550, 702, 731, 734, 763
Alw21I GWGCWC 1 cut(s) 1934
Alw26I GTCTC 4 cut(s) 232, 266, 279, 1125
AlwI GGATC 4 cut(s) 202, 1389, 1654, 1987
Ama87I CYCGRG 3 cut(s) 200, 229, 1948
AoxI GGCC 6 cut(s) 175, 297, 1343, 1362, 2416, 2502
ApeKI GCWGC 4 cut(s) 954, 1256, 2351, 2526
ApoI RAATTY 4 cut(s) 447, 2120, 2314, 2627
AseI ATTAAT 1 cut(s) 549
Asp700I GAANNNNTTC 1 cut(s) 2330
Asp718I GGTACC 1 cut(s) 695
AspLEI GCGC 1 cut(s) 1767
AspS9I GGNCC 8 cut(s) 15, 176, 220, 1349, 1486, 2503, 2656, 2675
AsuC2I CCSGG 2 cut(s) 279, 1901
AsuHPI GGTGA 6 cut(s) 335, 530, 679, 1306, 1892, 2620
AsuII TTCGAA 2 cut(s) 338, 897
AsuNHI GCTAGC 1 cut(s) 2080
AvaI CYCGRG 3 cut(s) 200, 229, 1948
AvaII GGWCC 6 cut(s) 15, 220, 1349, 1486, 2656, 2675
BaeGI GKGCMC 1 cut(s) 1410
BaeI ACNNNNGTAYC 2 cut(s) 2415, 2448
BalI TGGCCA 1 cut(s) 299
BanI GGYRCC 3 cut(s) 695, 1575, 2481
BanII GRGCYC 2 cut(s) 81, 212
BauI CACGAG 1 cut(s) 101
BbrPI CACGTG 1 cut(s) 1558
BbsI GAAGAC 1 cut(s) 897
Bbv12I GWGCWC 1 cut(s) 1934
BbvCI CCTCAGC 1 cut(s) 1922
BbvI GCAGC 4 cut(s) 966, 1268, 2338, 2513
BccI CCATC 6 cut(s) 286, 575, 638, 1202, 2404, 2582
BceAI ACGGC 5 cut(s) 580, 1377, 1842, 2414, 2678
BciT130I CCWGG 4 cut(s) 1347, 2015, 2360, 2507
BclI TGATCA 1 cut(s) 1753
BcnI CCSGG 2 cut(s) 279, 1901
BcoDI GTCTC 4 cut(s) 232, 266, 279, 1125
BfaI CTAG 5 cut(s) 705, 1245, 1829, 2081, 2468
BfmI CTRYAG 1 cut(s) 765
BfoI RGCGCY 1 cut(s) 1768
BfuAI ACCTGC 1 cut(s) 1156
BglII AGATCT 3 cut(s) 1501, 1910, 2470
BisI GCNGC 8 cut(s) 47, 245, 248, 310, 955, 1257, 2352, 2527
BlsI GCNGC 8 cut(s) 48, 246, 249, 311, 956, 1258, 2353, 2528
Bme1390I CCNGG 6 cut(s) 279, 1347, 1901, 2015, 2360, 2507
Bme18I GGWCC 6 cut(s) 15, 220, 1349, 1486, 2656, 2675
BmeT110I CYCGRG 3 cut(s) 200, 229, 1948
BmgT120I GGNCC 8 cut(s) 15, 176, 220, 1349, 1486, 2503, 2656, 2675
BmrFI CCNGG 6 cut(s) 279, 1347, 1901, 2015, 2360, 2507
BmrI ACTGGG 1 cut(s) 909
BmsI GCATC 8 cut(s) 231, 670, 1303, 1525, 1555, 1581, 2014, 2549
BmtI GCTAGC 1 cut(s) 2084
BmuI ACTGGG 1 cut(s) 909
BpiI GAAGAC 1 cut(s) 897
BpmI CTGGAG 2 cut(s) 447, 2391
Bpu10I CCTNAGC 1 cut(s) 1922
Bpu14I TTCGAA 2 cut(s) 338, 897
BpuEI CTTGAG 3 cut(s) 2033, 2078, 2636
BpuMI CCSGG 2 cut(s) 279, 1901
Bsa29I ATCGAT 1 cut(s) 543
BsaAI YACGTR 1 cut(s) 1558
BsaHI GRCGYC 1 cut(s) 44
BsaJI CCNNGG 4 cut(s) 1899, 2014, 2505, 2506
BsaWI WCCGGW 1 cut(s) 212
Bsc4I CCNNNNNNNGG 8 cut(s) 63, 173, 191, 229, 230, 705, 1864, 2672
Bse118I RCCGGY 1 cut(s) 1578
Bse1I ACTGG 4 cut(s) 915, 1403, 1927, 2646
Bse3DI GCAATG 4 cut(s) 24, 1148, 2346, 2678
BseBI CCWGG 4 cut(s) 1347, 2015, 2360, 2507
BseCI ATCGAT 1 cut(s) 543
BseDI CCNNGG 4 cut(s) 1899, 2014, 2505, 2506
BseGI GGATG 6 cut(s) 586, 649, 1689, 2460, 2564, 2593
BseLI CCNNNNNNNGG 8 cut(s) 63, 173, 191, 229, 230, 705, 1864, 2672
BseMI GCAATG 4 cut(s) 24, 1148, 2346, 2678
BseMII CTCAG 5 cut(s) 396, 476, 1136, 1936, 2528
BseNI ACTGG 4 cut(s) 915, 1403, 1927, 2646
BseRI GAGGAG 5 cut(s) 105, 249, 422, 741, 1706
BseSI GKGCMC 1 cut(s) 1410
BseXI GCAGC 4 cut(s) 966, 1268, 2338, 2513
Bsh1236I CGCG 2 cut(s) 818, 1236
Bsh1285I CGRYCG 1 cut(s) 331
BshFI GGCC 6 cut(s) 177, 299, 1345, 1364, 2418, 2504
BshNI GGYRCC 3 cut(s) 695, 1575, 2481
BshVI ATCGAT 1 cut(s) 543
BsiEI CGRYCG 1 cut(s) 331
BsiHKAI GWGCWC 1 cut(s) 1934
BsiHKCI CYCGRG 3 cut(s) 200, 229, 1948
BsiSI CCGG 6 cut(s) 213, 278, 557, 1579, 1901, 2485
BslFI GGGAC 7 cut(s) 91, 206, 415, 1335, 1452, 1472, 2642
BslI CCNNNNNNNGG 8 cut(s) 63, 173, 191, 229, 230, 705, 1864, 2672
BsmAI GTCTC 4 cut(s) 232, 266, 279, 1125
BsmBI CGTCTC 2 cut(s) 266, 1125
BsmFI GGGAC 7 cut(s) 91, 206, 415, 1335, 1452, 1472, 2642
BsmI GAATGC 4 cut(s) 1534, 1789, 2354, 2381
BsnI GGCC 6 cut(s) 177, 299, 1345, 1364, 2418, 2504
BsoBI CYCGRG 3 cut(s) 200, 229, 1948
Bsp119I TTCGAA 2 cut(s) 338, 897
Bsp1286I GDGCHC 4 cut(s) 81, 212, 1410, 1934
Bsp68I TCGCGA 1 cut(s) 1236
BspANI GGCC 6 cut(s) 177, 299, 1345, 1364, 2418, 2504
BspCNI CTCAG 5 cut(s) 397, 477, 1135, 1935, 2529
BspDI ATCGAT 1 cut(s) 543
BspFNI CGCG 2 cut(s) 818, 1236
BspMI ACCTGC 1 cut(s) 1156
BspOI GCTAGC 1 cut(s) 2084
BspPI GGATC 4 cut(s) 202, 1389, 1654, 1987
BspT104I TTCGAA 2 cut(s) 338, 897
BspT107I GGYRCC 3 cut(s) 695, 1575, 2481
BsrBI CCGCTC 1 cut(s) 1228
BsrDI GCAATG 4 cut(s) 24, 1148, 2346, 2678
BsrFI RCCGGY 1 cut(s) 1578
BsrI ACTGG 4 cut(s) 915, 1403, 1927, 2646
BssAI RCCGGY 1 cut(s) 1578
BssECI CCNNGG 4 cut(s) 1899, 2014, 2505, 2506
BssNAI GTATAC 2 cut(s) 257, 1219
BssNI GRCGYC 1 cut(s) 44
BssSI CACGAG 1 cut(s) 101
Bst1107I GTATAC 2 cut(s) 257, 1219
Bst2BI CACGAG 1 cut(s) 101
Bst2UI CCWGG 4 cut(s) 1347, 2015, 2360, 2507
Bst4CI ACNGT 9 cut(s) 7, 700, 1072, 1178, 1619, 1741, 2108, 2144, 2448
Bst6I CTCTTC 6 cut(s) 365, 718, 734, 839, 1278, 1941
BstACI GRCGYC 1 cut(s) 44
BstBAI YACGTR 1 cut(s) 1558
BstBI TTCGAA 2 cut(s) 338, 897
BstC8I GCNNGC 5 cut(s) 90, 1820, 1855, 2082, 2086
BstENI CCTNNNNNAGG 1 cut(s) 2670
BstF5I GGATG 6 cut(s) 586, 649, 1689, 2460, 2564, 2593
BstFNI CGCG 2 cut(s) 818, 1236
BstH2I RGCGCY 1 cut(s) 1768
BstHHI GCGC 1 cut(s) 1767
BstMAI GTCTC 4 cut(s) 232, 266, 279, 1125
BstMCI CGRYCG 1 cut(s) 331
BstMWI GCNNNNNNNGC 7 cut(s) 85, 824, 1265, 1322, 1529, 1771, 2351
BstNI CCWGG 4 cut(s) 1347, 2015, 2360, 2507
BstSCI CCNGG 6 cut(s) 277, 1345, 1899, 2013, 2358, 2505
BstSFI CTRYAG 1 cut(s) 765
BstSLI GKGCMC 1 cut(s) 1410
BstUI CGCG 2 cut(s) 818, 1236
BstV1I GCAGC 4 cut(s) 966, 1268, 2338, 2513
BstV2I GAAGAC 1 cut(s) 897
BstX2I RGATCY 5 cut(s) 194, 1501, 1646, 1910, 2470
BstYI RGATCY 5 cut(s) 194, 1501, 1646, 1910, 2470
BstZ17I GTATAC 2 cut(s) 257, 1219
Bsu15I ATCGAT 1 cut(s) 543
BsuRI GGCC 6 cut(s) 177, 299, 1345, 1364, 2418, 2504
BsuTUI ATCGAT 1 cut(s) 543
BtsCI GGATG 6 cut(s) 586, 649, 1689, 2460, 2564, 2593
BtsI GCAGTG 3 cut(s) 1107, 1493, 1724
BtuMI TCGCGA 1 cut(s) 1236
BveI ACCTGC 1 cut(s) 1156
Cac8I GCNNGC 5 cut(s) 90, 1820, 1855, 2082, 2086
CfoI GCGC 1 cut(s) 1767
Cfr10I RCCGGY 1 cut(s) 1578
Cfr13I GGNCC 8 cut(s) 15, 176, 220, 1349, 1486, 2503, 2656, 2675
ClaI ATCGAT 1 cut(s) 543
CseI GACGC 2 cut(s) 52, 824
Csp6I GTAC 4 cut(s) 591, 696, 927, 2231
CviAII CATG 5 cut(s) 692, 1222, 1366, 1680, 2478
CviQI GTAC 4 cut(s) 591, 696, 927, 2231
DraI TTTAAA 1 cut(s) 1702
DrdI GACNNNNNNGTC 1 cut(s) 103
DseDI GACNNNNNNGTC 1 cut(s) 103
EaeI YGGCCR 3 cut(s) 297, 1362, 2416
Eam1104I CTCTTC 6 cut(s) 365, 718, 734, 839, 1278, 1941
EarI CTCTTC 6 cut(s) 365, 718, 734, 839, 1278, 1941
EciI GGCGGA 2 cut(s) 265, 2680
Eco24I GRGCYC 2 cut(s) 81, 212
Eco32I GATATC 2 cut(s) 1333, 2279
Eco47I GGWCC 6 cut(s) 15, 220, 1349, 1486, 2656, 2675
Eco57I CTGAAG 3 cut(s) 1302, 1338, 2009
Eco72I CACGTG 1 cut(s) 1558
Eco88I CYCGRG 3 cut(s) 200, 229, 1948
EcoNI CCTNNNNNAGG 1 cut(s) 2670
EcoO109I RGGNCCY 3 cut(s) 15, 2503, 2656
EcoRII CCWGG 4 cut(s) 1345, 2013, 2358, 2505
EcoRV GATATC 2 cut(s) 1333, 2279
EcoT38I GRGCYC 2 cut(s) 81, 212
Esp3I CGTCTC 2 cut(s) 266, 1125
FaeI CATG 5 cut(s) 695, 1225, 1369, 1683, 2481
FaqI GGGAC 7 cut(s) 91, 206, 415, 1335, 1452, 1472, 2642
FatI CATG 5 cut(s) 691, 1221, 1365, 1679, 2477
FauI CCCGC 1 cut(s) 305
FauNDI CATATG 1 cut(s) 1131
FbaI TGATCA 1 cut(s) 1753
FblI GTMKAC 2 cut(s) 256, 1218
Fnu4HI GCNGC 8 cut(s) 47, 245, 248, 310, 955, 1257, 2352, 2527
FokI GGATG 6 cut(s) 593, 656, 1696, 2467, 2571, 2600
FriOI GRGCYC 2 cut(s) 81, 212
Fsp4HI GCNGC 8 cut(s) 47, 245, 248, 310, 955, 1257, 2352, 2527
FspBI CTAG 5 cut(s) 705, 1245, 1829, 2081, 2468
GlaI GCGC 1 cut(s) 1766
GluI GCNGC 8 cut(s) 47, 245, 248, 310, 955, 1257, 2352, 2527
GsuI CTGGAG 2 cut(s) 447, 2391
HaeII RGCGCY 1 cut(s) 1768
HaeIII GGCC 6 cut(s) 177, 299, 1345, 1364, 2418, 2504
HapII CCGG 6 cut(s) 213, 278, 557, 1579, 1901, 2485
HgaI GACGC 2 cut(s) 52, 824
HhaI GCGC 1 cut(s) 1767
Hin1I GRCGYC 1 cut(s) 44
Hin1II CATG 5 cut(s) 695, 1225, 1369, 1683, 2481
Hin6I GCGC 1 cut(s) 1765
HinP1I GCGC 1 cut(s) 1765
HincII GTYRAC 1 cut(s) 1057
HindII GTYRAC 1 cut(s) 1057
HindIII AAGCTT 1 cut(s) 2054
HpaII CCGG 6 cut(s) 213, 278, 557, 1579, 1901, 2485
HphI GGTGA 6 cut(s) 335, 530, 679, 1306, 1892, 2620
Hpy166II GTNNAC 8 cut(s) 257, 1057, 1068, 1105, 1219, 1883, 2231, 2521
Hpy8I GTNNAC 8 cut(s) 257, 1057, 1068, 1105, 1219, 1883, 2231, 2521
Hpy99I CGWCG 2 cut(s) 46, 2325
HpyCH4III ACNGT 9 cut(s) 7, 700, 1072, 1178, 1619, 1741, 2108, 2144, 2448
HpyCH4IV ACGT 4 cut(s) 259, 837, 1215, 1557
HpyF10VI GCNNNNNNNGC 7 cut(s) 85, 824, 1265, 1322, 1529, 1771, 2351
HpySE526I ACGT 4 cut(s) 259, 837, 1215, 1557
Hsp92I GRCGYC 1 cut(s) 44
Hsp92II CATG 5 cut(s) 695, 1225, 1369, 1683, 2481
HspAI GCGC 1 cut(s) 1765
KpnI GGTACC 1 cut(s) 699
Ksp22I TGATCA 1 cut(s) 1753
LmnI GCTCC 6 cut(s) 215, 584, 659, 1225, 1693, 2152
Lsp1109I GCAGC 4 cut(s) 966, 1268, 2338, 2513
LweI GCATC 8 cut(s) 231, 670, 1303, 1525, 1555, 1581, 2014, 2549
MaeI CTAG 5 cut(s) 705, 1245, 1829, 2081, 2468
MaeII ACGT 4 cut(s) 259, 837, 1215, 1557
MaeIII GTNAC 8 cut(s) 323, 625, 700, 1007, 1178, 1665, 1831, 2138
MbiI CCGCTC 1 cut(s) 1228
MfeI CAATTG 1 cut(s) 1539
MflI RGATCY 5 cut(s) 194, 1501, 1646, 1910, 2470
MhlI GDGCHC 4 cut(s) 81, 212, 1410, 1934
MlsI TGGCCA 1 cut(s) 299
MluNI TGGCCA 1 cut(s) 299
MlyI GAGTC 6 cut(s) 55, 113, 613, 803, 904, 1700
MmeI TCCRAC 7 cut(s) 516, 700, 774, 964, 1676, 2303, 2536
Mox20I TGGCCA 1 cut(s) 299
MroXI GAANNNNTTC 1 cut(s) 2330
MscI TGGCCA 1 cut(s) 299
MseI TTAA 8 cut(s) 357, 549, 1377, 1701, 1736, 2180, 2312, 2513
Msp20I TGGCCA 1 cut(s) 299
MspA1I CMGCKG 1 cut(s) 2526
MspI CCGG 6 cut(s) 213, 278, 557, 1579, 1901, 2485
MspR9I CCNGG 6 cut(s) 279, 1347, 1901, 2015, 2360, 2507
MunI CAATTG 1 cut(s) 1539
Mva1269I GAATGC 4 cut(s) 1534, 1789, 2354, 2381
MvaI CCWGG 4 cut(s) 1347, 2015, 2360, 2507
MvnI CGCG 2 cut(s) 818, 1236
MwoI GCNNNNNNNGC 7 cut(s) 85, 824, 1265, 1322, 1529, 1771, 2351
NciI CCSGG 2 cut(s) 279, 1901
NdeI CATATG 1 cut(s) 1131
NheI GCTAGC 1 cut(s) 2080
NlaIII CATG 5 cut(s) 695, 1225, 1369, 1683, 2481
NmeAIII GCCGAG 3 cut(s) 43, 313, 2321
NmuCI GTSAC 5 cut(s) 323, 625, 700, 1831, 2138
NruI TCGCGA 1 cut(s) 1236
NspV TTCGAA 2 cut(s) 338, 897
PaeR7I CTCGAG 1 cut(s) 1948
PasI CCCWGGG 1 cut(s) 2506
PcsI WCGNNNNNNNCGW 1 cut(s) 894
PctI GAATGC 4 cut(s) 1534, 1789, 2354, 2381
PdmI GAANNNNTTC 1 cut(s) 2330
PfoI TCCNGGA 1 cut(s) 2358
PkrI GCNGC 8 cut(s) 48, 246, 249, 311, 956, 1258, 2353, 2528
Ple19I CGATCG 1 cut(s) 331
PleI GAGTC 6 cut(s) 55, 112, 612, 803, 904, 1700
PmaCI CACGTG 1 cut(s) 1558
PmlI CACGTG 1 cut(s) 1558
PpsI GAGTC 6 cut(s) 55, 112, 612, 803, 904, 1700
Ppu21I YACGTR 1 cut(s) 1558
PpuMI RGGWCCY 2 cut(s) 15, 2656
PshBI ATTAAT 1 cut(s) 549
Psp5II RGGWCCY 2 cut(s) 15, 2656
Psp6I CCWGG 4 cut(s) 1345, 2013, 2358, 2505
PspCI CACGTG 1 cut(s) 1558
PspGI CCWGG 4 cut(s) 1345, 2013, 2358, 2505
PspPI GGNCC 8 cut(s) 15, 176, 220, 1349, 1486, 2503, 2656, 2675
PspPPI RGGWCCY 2 cut(s) 15, 2656
PspXI VCTCGAGB 1 cut(s) 1948
PsuI RGATCY 5 cut(s) 194, 1501, 1646, 1910, 2470
PvuI CGATCG 1 cut(s) 331
PvuII CAGCTG 1 cut(s) 2526
RruI TCGCGA 1 cut(s) 1236
RsaI GTAC 4 cut(s) 592, 697, 928, 2232
RsaNI GTAC 4 cut(s) 591, 696, 927, 2231
SaqAI TTAA 8 cut(s) 357, 549, 1377, 1701, 1736, 2180, 2312, 2513
SatI GCNGC 8 cut(s) 47, 245, 248, 310, 955, 1257, 2352, 2527
Sau96I GGNCC 8 cut(s) 15, 176, 220, 1349, 1486, 2503, 2656, 2675
SchI GAGTC 6 cut(s) 55, 113, 613, 803, 904, 1700
ScrFI CCNGG 6 cut(s) 279, 1347, 1901, 2015, 2360, 2507
SduI GDGCHC 4 cut(s) 81, 212, 1410, 1934
SfaNI GCATC 8 cut(s) 231, 670, 1303, 1525, 1555, 1581, 2014, 2549
SfcI CTRYAG 1 cut(s) 765
Sfr274I CTCGAG 1 cut(s) 1948
SfuI TTCGAA 2 cut(s) 338, 897
SinI GGWCC 6 cut(s) 15, 220, 1349, 1486, 2656, 2675
SlaI CTCGAG 1 cut(s) 1948
SmlI CTYRAG 4 cut(s) 1948, 2048, 2057, 2651
SmoI CTYRAG 4 cut(s) 1948, 2048, 2057, 2651
SspI AATATT 1 cut(s) 2491
SspMI CTAG 5 cut(s) 705, 1245, 1829, 2081, 2468
StyD4I CCNGG 6 cut(s) 277, 1345, 1899, 2013, 2358, 2505
TaaI ACNGT 9 cut(s) 7, 700, 1072, 1178, 1619, 1741, 2108, 2144, 2448
TaiI ACGT 4 cut(s) 262, 840, 1218, 1560
TaqII GACCGA 2 cut(s) 208, 1794
TatI WGTACW 1 cut(s) 2230
TauI GCSGC 4 cut(s) 49, 247, 250, 312
Tru1I TTAA 8 cut(s) 357, 549, 1377, 1701, 1736, 2180, 2312, 2513
Tru9I TTAA 8 cut(s) 357, 549, 1377, 1701, 1736, 2180, 2312, 2513
TseFI GTSAC 5 cut(s) 323, 625, 700, 1831, 2138
TseI GCWGC 4 cut(s) 954, 1256, 2351, 2526
Tsp45I GTSAC 5 cut(s) 323, 625, 700, 1831, 2138
TspDTI ATGAA 9 cut(s) 729, 884, 1029, 1070, 1118, 1382, 1628, 1962, 2355
VpaK11BI GGWCC 6 cut(s) 15, 220, 1349, 1486, 2656, 2675
VspI ATTAAT 1 cut(s) 549
XagI CCTNNNNNAGG 1 cut(s) 2670
XapI RAATTY 4 cut(s) 447, 2120, 2314, 2627
XhoI CTCGAG 1 cut(s) 1948
XmiI GTMKAC 2 cut(s) 256, 1218
XmnI GAANNNNTTC 1 cut(s) 2330
XspI CTAG 5 cut(s) 705, 1245, 1829, 2081, 2468
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.