FvH4_1g08600

Leucine-rich repeats, outliers

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0002012
Physical Location & Seq
Forward (+)
4560323 .. 4564577
4255 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g08600.t1

Sequence Viewer

Length: 2712 bp
ATGACGGTCCTTAGATCGCGTGAGATCGCCCCGCCCAAAACGACGTCGCATCCCCCCAAAACGCGGCCCAAATCAGACCCACCCACCCCAGCCGTTACTACTCCTACTACTACTACTACTACCACCCCAGCCGTTAATTCCACATCCTCCTCCATATCCCAAAACCCTAACCCTAATTCCAATCCCAATCCCAAGCCCAGCGATTCCGGCTCAATACGGCGGCGGAGTCTCCGTCTCGCTTCGAAAACCCCCGATTCCGCCGCAGAGAGGAATACCCAAATCGGCGAAGTGGTTGTTGATTTGTTCGGAGAGAGGGTTACGGCTATGGGAGATGAGAAAGGGGCTGAGGACTTGAAATTGGGTTCTGGGTCGGACTCTGTGACCCGATTGAGTGGGAAAGGTTCGGGCTTTGGGGATGAGGAGAAGGGTTTGAGTGAATTAGGGCTTGGTGGTGATTTGGGGGTTTCTGGGGATAATGGTAAGGAGGAAGAGAAGAAGAGGAAGCTGGACATTGATATCAATTTGCCGGCTGCGGAATGTGAGGAGGAAGATGGAGGGAGTAGGAGCTTTTTGAGCTTGCGATCGGGGAAGAGAGTTGCGAAGAGAGGAGGGGATGGTGGTGGTGGTGGTGGTGGTAATGGGGAGTGGGGGAGTGATTTGAGTGCTGAGAAGAGTGGTGGTGTGAAAGGGAAGGGGAAGTGGGGTGAGATTAGTGTTATTGATGTGGTGGTGTTGGATTCGGATGAGGAAGATGAGAGGGTTATTGATGTGGTGGTGTTGGATTCGGATTCGAATGTGTTGCAGAGTGATGTTCCAAGTGGGGGGAGCTCTGAGGGGAAAGGGAAGAGGAACTTGAGTGATGTAGTTGAGGATTCGGAGGATGGGATGAGTTCCGGTGAGAATGGTGGGGGTAGAAGGAAGTTTAGCAGACAAGAAAAAGGGAAGGAGAAGTTGATTGGAGGAGCTTTGTTACCGAATGATTTTGACAAAGTGGAATTGGATTTCTTGGGAATAGGAGCATTGAGTGAGTTGAGTTCGATGCCCAATGTGGTGTTGAGTGAGTTGAGTTTGATGCCCAATGTGGTGTTGAGTGAATTGAGTTTGATGTCCAATGTGGTTCCGAGTCCTGCTCAGGTAGGGGAGAATGTAGCAATGCAAGAGCAGGTGCAGGCGAGGAACACTAATGCAAGAGAGGAGGGAAGAGACAGGAATCAATACATGGAACGGTTTCGGGACATAGCCAGGCAAAATGCTTCTCGCTTTGCTCGTTTCGATCCTCGAGAGGAAGAGGAGAATGATATGCCTCCTCAGGTTGATGTGGAGCTAGAGGATGAAGATTGGCCTGGTCCATTTTCTACTGCGATGAGGATTATGAGAGATGGAGCAGAAAAGAATATGCAAGAGCACAGTGCATCTAAAGACAAGACCAAACCAGCATTGGTGAAGTGGGTTCCCAAGCGTCAGGAACAGGATCTTGCAATATCAAAGAATTTGATCCCCTCATTGCAGGAGTTGTGTTTGTCTGTTCTTGCTAAGAATGCCGATGAAATAGTTTCACTTGAGAGTGTTCCAGATGCTTTGAGGCACCAGCTCAGTCATCTGCTCTGTGATTCTAGAAGAATGAATACTCATTTTTTCGAACTTCTTGTTCAAGGATCGCCAACAGAGGTTCGCTTAAGGGATTGCTCATGGTTGACAGAGGAAGAGTTCACAAAATCTTTTCAGCTCTGCGACATTACCAACTTAACAGTACTACAACTTGACCAATGTGGGCGCTGTCTGCCAGATTATATATTGAATTCTACCTTAGCTCGGTCAGCCAATTGCTTGCCCTCTTTAGTTTCTTTATCCCTCAGTGGTGCATGTCGTCTTTCAGATGTTGGGTTAGGTGCACTTGTCTCTTCTGTCCCTGCACTAAGATCTCTGAATCTCAGCCAGTGTTCCCTTCTCACTTCCTCAAGTATCGACACTTTAGCTAACTCATTGGGATCATTGCTGAAGGAACTATATTTAAATGATTGCCAAAGCATTGATGCTATGCAGATTCTACCTGCCTTAAAGAAGTTTGAACATTTGGAGGTATTGTGGCTGCCCGGCATTGAAAATGTTTGTGATGATTTTATTAAGGAGTTTATTTCTGCTCGTGGCCACAATTTGAAGGAGCTTAGTTTGACTGATTGCATAAATTTAACAGATTCATCTGTGAAAGTCTTAGCTGAAACGTGTTCTGGGTTATGTGCGCTTGACCTATTTAACTTGCATAAGCTGACAGATTATTCTTTAGGATATCTTGCAAATGGCTGCCGAGCAATTCAAACATTAAAATTTTGTCGCAATTCATTCAGTGATGAAGCTGTTGCTGCATTCCTGGAAACTTCTGGAGAGTGTTTGAAAGAACTTTCACTAAATAATATCACGAAGGTTGGTGACAACACAGCCATATCACTTGCCAGACATTCAAGGAACTTACATTGTCTGGATCTATCTTGGTGCCGGAATTTGACAGATGAGGCCCTGGGTTTGATTGTGGACAGCTGCCTATCTCTGAAGATGTTAAAACTGTTTGGATGCACTCAGATTACAGACTTGTTCCTGTCTGGCCACTCAAATCCTGACGTAAAAATCATTGGCGTGAGAATGACTCCAATATTGAAAGATGTTAGGGTGCCTGATCCTGCAGCAGGTCCATTACATTATTCAGCAGTCTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_6

Protein Analysis

904

Amino Acids

97.77

Weight (kDa)

4.98

Isoelectric Point (pI)

47.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7885 PF25372 729 - 874 3.3e-06 Leucine Rich Repeat Domain of unknown function (DUF7885)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1153
AatII GACGTC 1 cut(s) 47
Acc36I ACCTGC 3 cut(s) 1153, 2059, 2672
AccB1I GGYRCC 3 cut(s) 1584, 2490, 2665
AccII CGCG 2 cut(s) 19, 64
AciI CCGC 7 cut(s) 32, 64, 220, 223, 258, 261, 533
AclWI GGATC 7 cut(s) 1268, 1479, 1489, 1663, 1996, 2487, 2666
AcoI YGGCCR 2 cut(s) 2146, 2599
AcsI RAATTY 5 cut(s) 1489, 1798, 2185, 2324, 2497
AcuI CTGAAG 2 cut(s) 2018, 2567
AcyI GRCGYC 1 cut(s) 44
AfaI GTAC 1 cut(s) 1752
AfiI CCNNNNNNNGG 5 cut(s) 63, 267, 821, 1812, 2681
AflII CTTAAG 1 cut(s) 1675
AflIII ACRYGT 1 cut(s) 2222
AjnI CCWGG 4 cut(s) 1241, 1342, 2367, 2514
AjuI GAANNNNNNNTTGG 2 cut(s) 429, 461
Alw21I GWGCWC 3 cut(s) 830, 1407, 1894
Alw26I GTCTC 4 cut(s) 233, 239, 1197, 1903
Alw44I GTGCAC 1 cut(s) 1890
AlwI GGATC 7 cut(s) 1268, 1479, 1489, 1663, 1996, 2487, 2666
Ama87I CYCGRG 1 cut(s) 1278
AoxI GGCC 5 cut(s) 65, 1340, 2146, 2511, 2599
ApaLI GTGCAC 1 cut(s) 1890
ApeKI GCWGC 6 cut(s) 530, 2089, 2301, 2360, 2535, 2678
ApoI RAATTY 5 cut(s) 1489, 1798, 2185, 2324, 2497
Asp700I GAANNNNTTC 1 cut(s) 1227
AspLEI GCGC 2 cut(s) 1776, 2242
AspS9I GGNCC 5 cut(s) 7, 66, 1346, 2512, 2684
AsuC2I CCSGG 1 cut(s) 2094
AsuHPI GGTGA 5 cut(s) 464, 716, 908, 1453, 2438
AsuII TTCGAA 3 cut(s) 242, 791, 1638
AvaI CYCGRG 1 cut(s) 1278
AvaII GGWCC 3 cut(s) 7, 1346, 2684
AxyI CCTNAGG 1 cut(s) 1308
BaeGI GKGCMC 1 cut(s) 1894
BalI TGGCCA 2 cut(s) 2148, 2601
BanI GGYRCC 3 cut(s) 1584, 2490, 2665
BanII GRGCYC 1 cut(s) 830
BarI GAAGNNNNNNTAC 2 cut(s) 1609, 1641
BauI CACGAG 1 cut(s) 2142
BbsI GAAGAC 1 cut(s) 2698
Bbv12I GWGCWC 3 cut(s) 830, 1407, 1894
BbvCI CCTCAGC 1 cut(s) 345
BbvI GCAGC 6 cut(s) 517, 2076, 2288, 2347, 2522, 2690
BccI CCATC 4 cut(s) 545, 608, 875, 1373
BceAI ACGGC 4 cut(s) 77, 116, 233, 336
BcgI CGANNNNNNTGC 2 cut(s) 781, 815
BciT130I CCWGG 4 cut(s) 1243, 1344, 2369, 2516
BcnI CCSGG 1 cut(s) 2094
BcoDI GTCTC 4 cut(s) 233, 239, 1197, 1903
BfaI CTAG 2 cut(s) 1325, 1614
BfmI CTRYAG 1 cut(s) 2676
BfoI RGCGCY 1 cut(s) 1777
BfrI CTTAAG 1 cut(s) 1675
BfuAI ACCTGC 3 cut(s) 1153, 2059, 2672
BglII AGATCT 1 cut(s) 1919
BisI GCNGC 9 cut(s) 65, 221, 261, 531, 2090, 2302, 2361, 2536, 2679
BlsI GCNGC 9 cut(s) 66, 222, 262, 532, 2091, 2303, 2362, 2537, 2680
BmcAI AGTACT 1 cut(s) 1752
Bme1390I CCNGG 5 cut(s) 1243, 1344, 2094, 2369, 2516
Bme18I GGWCC 3 cut(s) 7, 1346, 2684
BmeT110I CYCGRG 1 cut(s) 1278
BmgT120I GGNCC 5 cut(s) 7, 66, 1346, 2512, 2684
BmiI GGNNCC 5 cut(s) 1119, 1452, 1586, 2492, 2667
BmrFI CCNGG 5 cut(s) 1243, 1344, 2094, 2369, 2516
BmsI GCATC 7 cut(s) 58, 1029, 1062, 1421, 1564, 2023, 2558
BpiI GAAGAC 1 cut(s) 2698
BplI GAGNNNNNCTC 4 cut(s) 1114, 1146, 2626, 2658
BpmI CTGGAG 1 cut(s) 2400
Bpu10I CCTNAGC 3 cut(s) 345, 1131, 1807
Bpu14I TTCGAA 3 cut(s) 242, 791, 1638
BpuEI CTTGAG 3 cut(s) 874, 1580, 1942
BpuMI CCSGG 1 cut(s) 2094
BsaHI GRCGYC 1 cut(s) 44
BsaJI CCNNGG 2 cut(s) 2514, 2515
BsaWI WCCGGW 1 cut(s) 893
BsaXI ACNNNNNCTCC 6 cut(s) 217, 247, 300, 330, 2069, 2099
Bsc4I CCNNNNNNNGG 5 cut(s) 63, 267, 821, 1812, 2681
Bse118I RCCGGY 1 cut(s) 526
Bse1I ACTGG 1 cut(s) 1936
Bse21I CCTNAGG 1 cut(s) 1308
Bse3DI GCAATG 3 cut(s) 1158, 1502, 1991
BseBI CCWGG 4 cut(s) 1243, 1344, 2369, 2516
BseDI CCNNGG 2 cut(s) 2514, 2515
BseGI GGATG 9 cut(s) 49, 143, 421, 619, 748, 886, 891, 1336, 2573
BseLI CCNNNNNNNGG 5 cut(s) 63, 267, 821, 1812, 2681
BseMI GCAATG 3 cut(s) 1158, 1502, 1991
BseMII CTCAG 9 cut(s) 336, 657, 822, 1145, 1322, 1606, 1867, 1945, 2588
BseNI ACTGG 1 cut(s) 1936
BseRI GAGGAG 8 cut(s) 139, 434, 557, 621, 975, 1208, 1296, 1304
BseSI GKGCMC 1 cut(s) 1894
BseXI GCAGC 6 cut(s) 517, 2076, 2288, 2347, 2522, 2690
BseYI CCCAGC 3 cut(s) 88, 127, 197
BsgI GTGCAG 2 cut(s) 1187, 1896
Bsh1236I CGCG 2 cut(s) 19, 64
Bsh1285I CGRYCG 1 cut(s) 584
BshFI GGCC 5 cut(s) 67, 1342, 2148, 2513, 2601
BshNI GGYRCC 3 cut(s) 1584, 2490, 2665
BsiEI CGRYCG 1 cut(s) 584
BsiHKAI GWGCWC 3 cut(s) 830, 1407, 1894
BsiHKCI CYCGRG 1 cut(s) 1278
BsiSI CCGG 5 cut(s) 207, 527, 894, 2094, 2494
BslFI GGGAC 2 cut(s) 1247, 1892
BslI CCNNNNNNNGG 5 cut(s) 63, 267, 821, 1812, 2681
BsmAI GTCTC 4 cut(s) 233, 239, 1197, 1903
BsmBI CGTCTC 1 cut(s) 239
BsmFI GGGAC 2 cut(s) 1247, 1892
BsmI GAATGC 2 cut(s) 1543, 2363
BsnI GGCC 5 cut(s) 67, 1342, 2148, 2513, 2601
BsoBI CYCGRG 1 cut(s) 1278
Bsp119I TTCGAA 3 cut(s) 242, 791, 1638
Bsp1286I GDGCHC 3 cut(s) 830, 1407, 1894
BspACI CCGC 7 cut(s) 32, 64, 220, 223, 258, 261, 533
BspANI GGCC 5 cut(s) 67, 1342, 2148, 2513, 2601
BspCNI CTCAG 9 cut(s) 337, 658, 823, 1144, 1321, 1605, 1866, 1944, 2587
BspFNI CGCG 2 cut(s) 19, 64
BspLI GGNNCC 5 cut(s) 1119, 1452, 1586, 2492, 2667
BspMAI CTGCAG 1 cut(s) 2680
BspMI ACCTGC 3 cut(s) 1153, 2059, 2672
BspPI GGATC 7 cut(s) 1268, 1479, 1489, 1663, 1996, 2487, 2666
BspT104I TTCGAA 3 cut(s) 242, 791, 1638
BspT107I GGYRCC 3 cut(s) 1584, 2490, 2665
BspTI CTTAAG 1 cut(s) 1675
BsrDI GCAATG 3 cut(s) 1158, 1502, 1991
BsrFI RCCGGY 1 cut(s) 526
BsrI ACTGG 1 cut(s) 1936
BssAI RCCGGY 1 cut(s) 526
BssECI CCNNGG 2 cut(s) 2514, 2515
BssNI GRCGYC 1 cut(s) 44
BssSI CACGAG 1 cut(s) 2142
Bst2BI CACGAG 1 cut(s) 2142
Bst2UI CCWGG 4 cut(s) 1243, 1344, 2369, 2516
Bst4CI ACNGT 5 cut(s) 7, 1227, 1409, 1750, 2562
BstACI GRCGYC 1 cut(s) 44
BstAFI CTTAAG 1 cut(s) 1675
BstBI TTCGAA 3 cut(s) 242, 791, 1638
BstC8I GCNNGC 4 cut(s) 528, 578, 1170, 1829
BstENI CCTNNNNNAGG 1 cut(s) 2679
BstF5I GGATG 9 cut(s) 49, 143, 421, 619, 748, 886, 891, 1336, 2573
BstFNI CGCG 2 cut(s) 19, 64
BstH2I RGCGCY 1 cut(s) 1777
BstHHI GCGC 2 cut(s) 1776, 2242
BstMAI GTCTC 4 cut(s) 233, 239, 1197, 1903
BstMCI CGRYCG 1 cut(s) 584
BstMWI GCNNNNNNNGC 6 cut(s) 207, 573, 1538, 1780, 1817, 2360
BstNI CCWGG 4 cut(s) 1243, 1344, 2369, 2516
BstNSI RCATGY 1 cut(s) 1866
BstSCI CCNGG 5 cut(s) 1241, 1342, 2092, 2367, 2514
BstSFI CTRYAG 1 cut(s) 2676
BstSLI GKGCMC 1 cut(s) 1894
BstUI CGCG 2 cut(s) 19, 64
BstV1I GCAGC 6 cut(s) 517, 2076, 2288, 2347, 2522, 2690
BstV2I GAAGAC 1 cut(s) 2698
BstX2I RGATCY 3 cut(s) 1471, 1919, 2479
BstYI RGATCY 3 cut(s) 1471, 1919, 2479
Bsu36I CCTNAGG 1 cut(s) 1308
BsuRI GGCC 5 cut(s) 67, 1342, 2148, 2513, 2601
BtgZI GCGATG 1 cut(s) 1376
BtsCI GGATG 9 cut(s) 49, 143, 421, 619, 748, 886, 891, 1336, 2573
BtsIMutI CAGTG 4 cut(s) 1414, 1861, 1943, 2350
BveI ACCTGC 3 cut(s) 1153, 2059, 2672
Cac8I GCNNGC 4 cut(s) 528, 578, 1170, 1829
CfoI GCGC 2 cut(s) 1776, 2242
Cfr10I RCCGGY 1 cut(s) 526
Cfr13I GGNCC 5 cut(s) 7, 66, 1346, 2512, 2684
CseI GACGC 1 cut(s) 1448
Csp6I GTAC 1 cut(s) 1751
CviAII CATG 3 cut(s) 1219, 1689, 1863
CviQI GTAC 1 cut(s) 1751
DraI TTTAAA 1 cut(s) 2013
EaeI YGGCCR 2 cut(s) 2146, 2599
EciI GGCGGA 2 cut(s) 238, 247
Ecl136II GAGCTC 1 cut(s) 828
Eco24I GRGCYC 1 cut(s) 830
Eco32I GATATC 2 cut(s) 517, 2288
Eco47I GGWCC 3 cut(s) 7, 1346, 2684
Eco53kI GAGCTC 1 cut(s) 828
Eco57I CTGAAG 2 cut(s) 2018, 2567
Eco81I CCTNAGG 1 cut(s) 1308
Eco88I CYCGRG 1 cut(s) 1278
EcoICRI GAGCTC 1 cut(s) 828
EcoNI CCTNNNNNAGG 1 cut(s) 2679
EcoO109I RGGNCCY 1 cut(s) 2512
EcoRI GAATTC 1 cut(s) 1798
EcoRII CCWGG 4 cut(s) 1241, 1342, 2367, 2514
EcoRV GATATC 2 cut(s) 517, 2288
EcoT38I GRGCYC 1 cut(s) 830
Esp3I CGTCTC 1 cut(s) 239
FaeI CATG 3 cut(s) 1222, 1692, 1866
FalI AAGNNNNNCTT 2 cut(s) 836, 868
FaqI GGGAC 2 cut(s) 1247, 1892
FatI CATG 3 cut(s) 1218, 1688, 1862
FauI CCCGC 1 cut(s) 39
Fnu4HI GCNGC 9 cut(s) 65, 221, 261, 531, 2090, 2302, 2361, 2536, 2679
FokI GGATG 9 cut(s) 36, 130, 428, 626, 755, 893, 898, 1343, 2580
FriOI GRGCYC 1 cut(s) 830
Fsp4HI GCNGC 9 cut(s) 65, 221, 261, 531, 2090, 2302, 2361, 2536, 2679
FspBI CTAG 2 cut(s) 1325, 1614
GlaI GCGC 2 cut(s) 1775, 2241
GluI GCNGC 9 cut(s) 65, 221, 261, 531, 2090, 2302, 2361, 2536, 2679
GsaI CCCAGC 3 cut(s) 92, 131, 201
GsuI CTGGAG 1 cut(s) 2400
HaeII RGCGCY 1 cut(s) 1777
HaeIII GGCC 5 cut(s) 67, 1342, 2148, 2513, 2601
HapII CCGG 5 cut(s) 207, 527, 894, 2094, 2494
HgaI GACGC 1 cut(s) 1448
HhaI GCGC 2 cut(s) 1776, 2242
Hin1I GRCGYC 1 cut(s) 44
Hin1II CATG 3 cut(s) 1222, 1692, 1866
Hin6I GCGC 2 cut(s) 1774, 2240
HinP1I GCGC 2 cut(s) 1774, 2240
HincII GTYRAC 1 cut(s) 1695
HindII GTYRAC 1 cut(s) 1695
HpaII CCGG 5 cut(s) 207, 527, 894, 2094, 2494
HphI GGTGA 5 cut(s) 464, 716, 908, 1453, 2438
Hpy166II GTNNAC 4 cut(s) 1695, 1710, 1892, 2530
Hpy188III TCNNGA 9 cut(s) 1232, 1280, 1463, 1571, 1614, 2379, 2416, 2477, 2612
Hpy8I GTNNAC 4 cut(s) 1695, 1710, 1892, 2530
Hpy99I CGWCG 2 cut(s) 46, 49
HpyAV CCTTC 8 cut(s) 418, 685, 909, 937, 1955, 1993, 2152, 2413
HpyCH4III ACNGT 5 cut(s) 7, 1227, 1409, 1750, 2562
HpyCH4IV ACGT 3 cut(s) 44, 2222, 2616
HpyF10VI GCNNNNNNNGC 6 cut(s) 207, 573, 1538, 1780, 1817, 2360
HpySE526I ACGT 3 cut(s) 44, 2222, 2616
Hsp92I GRCGYC 1 cut(s) 44
Hsp92II CATG 3 cut(s) 1222, 1692, 1866
HspAI GCGC 2 cut(s) 1774, 2240
KroI GCCGGC 1 cut(s) 526
KroNI GCCGGC 1 cut(s) 528
LmnI GCTCC 7 cut(s) 564, 825, 962, 1016, 1321, 1382, 2161
Lsp1109I GCAGC 6 cut(s) 517, 2076, 2288, 2347, 2522, 2690
LweI GCATC 7 cut(s) 58, 1029, 1062, 1421, 1564, 2023, 2558
MaeI CTAG 2 cut(s) 1325, 1614
MaeII ACGT 3 cut(s) 44, 2222, 2616
MaeIII GTNAC 5 cut(s) 94, 316, 379, 969, 2426
MfeI CAATTG 1 cut(s) 1822
MflI RGATCY 3 cut(s) 1471, 1919, 2479
MhlI GDGCHC 3 cut(s) 830, 1407, 1894
MlsI TGGCCA 2 cut(s) 2148, 2601
MluNI TGGCCA 2 cut(s) 2148, 2601
MlyI GAGTC 4 cut(s) 235, 368, 1132, 2635
MmeI TCCRAC 3 cut(s) 351, 714, 759
Mox20I TGGCCA 2 cut(s) 2148, 2601
MroNI GCCGGC 1 cut(s) 526
MroXI GAANNNNTTC 1 cut(s) 1227
MscI TGGCCA 2 cut(s) 2148, 2601
MslI CAYNNNNRTG 1 cut(s) 2630
Msp20I TGGCCA 2 cut(s) 2148, 2601
MspA1I CMGCKG 1 cut(s) 2535
MspCI CTTAAG 1 cut(s) 1675
MspI CCGG 5 cut(s) 207, 527, 894, 2094, 2494
MspR9I CCNGG 5 cut(s) 1243, 1344, 2094, 2369, 2516
MunI CAATTG 1 cut(s) 1822
Mva1269I GAATGC 2 cut(s) 1543, 2363
MvaI CCWGG 4 cut(s) 1243, 1344, 2369, 2516
MvnI CGCG 2 cut(s) 19, 64
MwoI GCNNNNNNNGC 6 cut(s) 207, 573, 1538, 1780, 1817, 2360
NaeI GCCGGC 1 cut(s) 528
NciI CCSGG 1 cut(s) 2094
NgoMIV GCCGGC 1 cut(s) 526
NlaIII CATG 3 cut(s) 1222, 1692, 1866
NlaIV GGNNCC 5 cut(s) 1119, 1452, 1586, 2492, 2667
NmeAIII GCCGAG 1 cut(s) 2330
NmuCI GTSAC 2 cut(s) 379, 2426
NspI RCATGY 1 cut(s) 1866
NspV TTCGAA 3 cut(s) 242, 791, 1638
PaeR7I CTCGAG 1 cut(s) 1278
PaqCI CACCTGC 1 cut(s) 1153
PasI CCCWGGG 1 cut(s) 2515
PcsI WCGNNNNNNNCGW 1 cut(s) 1264
PctI GAATGC 2 cut(s) 1543, 2363
PdiI GCCGGC 1 cut(s) 528
PdmI GAANNNNTTC 1 cut(s) 1227
PfoI TCCNGGA 1 cut(s) 2367
PkrI GCNGC 9 cut(s) 66, 222, 262, 532, 2091, 2303, 2362, 2537, 2680
Ple19I CGATCG 1 cut(s) 584
PleI GAGTC 4 cut(s) 234, 368, 1131, 2635
PpsI GAGTC 4 cut(s) 234, 368, 1131, 2635
Psp124BI GAGCTC 1 cut(s) 830
Psp6I CCWGG 4 cut(s) 1241, 1342, 2367, 2514
PspFI CCCAGC 3 cut(s) 88, 127, 197
PspGI CCWGG 4 cut(s) 1241, 1342, 2367, 2514
PspN4I GGNNCC 5 cut(s) 1119, 1452, 1586, 2492, 2667
PspPI GGNCC 5 cut(s) 7, 66, 1346, 2512, 2684
PstI CTGCAG 1 cut(s) 2680
PsuI RGATCY 3 cut(s) 1471, 1919, 2479
PvuI CGATCG 1 cut(s) 584
PvuII CAGCTG 1 cut(s) 2535
RsaI GTAC 1 cut(s) 1752
RsaNI GTAC 1 cut(s) 1751
RseI CAYNNNNRTG 1 cut(s) 2630
SacI GAGCTC 1 cut(s) 830
SatI GCNGC 9 cut(s) 65, 221, 261, 531, 2090, 2302, 2361, 2536, 2679
Sau96I GGNCC 5 cut(s) 7, 66, 1346, 2512, 2684
ScaI AGTACT 1 cut(s) 1752
SchI GAGTC 4 cut(s) 235, 368, 1132, 2635
ScrFI CCNGG 5 cut(s) 1243, 1344, 2094, 2369, 2516
SduI GDGCHC 3 cut(s) 830, 1407, 1894
SfaNI GCATC 7 cut(s) 58, 1029, 1062, 1421, 1564, 2023, 2558
SfcI CTRYAG 1 cut(s) 2676
Sfr274I CTCGAG 1 cut(s) 1278
SfuI TTCGAA 3 cut(s) 242, 791, 1638
SinI GGWCC 3 cut(s) 7, 1346, 2684
SlaI CTCGAG 1 cut(s) 1278
SmiI ATTTAAAT 1 cut(s) 2013
SmiMI CAYNNNNRTG 1 cut(s) 2630
SmlI CTYRAG 5 cut(s) 853, 1278, 1559, 1675, 1957
SmoI CTYRAG 5 cut(s) 853, 1278, 1559, 1675, 1957
SsiI CCGC 7 cut(s) 32, 64, 220, 223, 258, 261, 533
SspI AATATT 1 cut(s) 2649
SspMI CTAG 2 cut(s) 1325, 1614
SstI GAGCTC 1 cut(s) 830
StyD4I CCNGG 5 cut(s) 1241, 1342, 2092, 2367, 2514
SwaI ATTTAAAT 1 cut(s) 2013
TaaI ACNGT 5 cut(s) 7, 1227, 1409, 1750, 2562
TaiI ACGT 3 cut(s) 47, 2225, 2619
TaqI TCGA 7 cut(s) 242, 791, 1037, 1272, 1279, 1638, 1965
TaqII GACCGA 1 cut(s) 1803
TatI WGTACW 1 cut(s) 1750
TauI GCSGC 3 cut(s) 67, 223, 263
TscAI CASTG 4 cut(s) 1414, 1861, 1943, 2350
TseFI GTSAC 2 cut(s) 379, 2426
TseI GCWGC 6 cut(s) 530, 2089, 2301, 2360, 2535, 2678
Tsp45I GTSAC 2 cut(s) 379, 2426
TspDTI ATGAA 6 cut(s) 1347, 1560, 1637, 2187, 2328, 2364
TspGWI ACGGA 1 cut(s) 221
TspRI CASTG 4 cut(s) 1414, 1861, 1943, 2350
Vha464I CTTAAG 1 cut(s) 1675
VneI GTGCAC 1 cut(s) 1890
VpaK11BI GGWCC 3 cut(s) 7, 1346, 2684
XagI CCTNNNNNAGG 1 cut(s) 2679
XapI RAATTY 5 cut(s) 1489, 1798, 2185, 2324, 2497
XbaI TCTAGA 1 cut(s) 1613
XceI RCATGY 1 cut(s) 1866
XcmI CCANNNNNNNNNTGG 1 cut(s) 1435
XhoI CTCGAG 1 cut(s) 1278
XmnI GAANNNNTTC 1 cut(s) 1227
XspI CTAG 2 cut(s) 1325, 1614
ZraI GACGTC 1 cut(s) 45
ZrmI AGTACT 1 cut(s) 1752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.