MD15G1217000.v1.1

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
17503964 .. 17506376
2413 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1217000.v1.1.491

Sequence Viewer

Length: 1563 bp
ATGGAAAATCTAAAGTTGGCACAATGTGTAGATGCCGAAGGAAGAACTCCGCTGCTCCTAGCTGCCACCTTGGCTTCTGAGAATAAGGAGTTGGTGTGGTACTTTTTGTTGGTAACTACAAATGAGGAGCCTGGTCATCCTTTTACTGGCCACTGGGCTGCTAACCTAGTCAATATGCTTATTGCCTCAGGTTTCCATGAAATTTCACTGTATGTGCTTAATAAATATCCTGAGTTGGCCATTGCTAAAGATAAAGAAGATTGTACTGCTTTGTATGTTTTGGCAAGGAATCAATCAAACTTCCTTAGTGGCAGCAGGCTTGGATTTTGGGAAAGCTGCATTTACTCATTTCTCCCTGTTGAAGTGGACTCTATACCACCACACTCAGTGAGAACCTATGTGGCTCGCCATGGAAGTGTCCAAAACCTTCAGACAATGGCAACACCAGAACAGTATGGAGTTCTTCATGGGTTAAGAAGAGTACTTTTTGGAGCTATTAAACGAATAGCACCAGCTAGTTTCACGCAACTCCATGATGCAAAACTTAGACATCACTGTGCAGTTGAACTAGTAAAACGTATTTGCTCACAACTTTCACAGAGGCATACTTCTTGGCGGTTCAATTATCTTTTGAATTCAGATATCATGCAGATAGCCACTGTAAATGGCATAGTTGAAATTATAAGTATGCTCGTAGAATCTTTTCCAGATCTAATATGGGTTCGCCTCCTCAACAACCAATATTTGTTACTCAACTTCGCTATTGAACTTCGACATGAACATCTTTTTCGTACTGTGTATGATAAGACTGCACGAAGTAAATTAATGGCTGCTACACTACTTGAATCGGGGGGTTCCATCTTGCATCTGGCAGCAAAGTTGGCTCCTCTTCCGCAACTCTCATCTATTTCCGGTGCAGCTCTACAAATGCAGAGAGAACTGCAGTGGTTCAAGGAGGTGGAGAAACTAGTTCACCCCTATTATAAGGAGAGCCGGAACCAAAACGGAGAATCTGCTAGAGAATTATTCACCAAGGAACACAAATTATTGGCTGAGAGCGGAGAGAAATGGCTAAAGGATACGTCAAATTCTTGCATGCTCGTATCAACTCTCGTTGCCACAGTTGTGTTTGCTGCTGCTTTTACAGTACCTGGATGTAACGACAACGAAGGAGCTCCAATTTTCTTACAGAAGAAGTCAGCCATATTCTTGGTGTTTGTTGTTTCGGATACAGTAGCTCTATTTTCTTCTTTAACTTCCCTTTTGATGTTTCTATCAATCCTAACTGCGCGTTATGCTGAAGAAGATTTCCTAGAGTCACTACCAAAGAGGTTGATAATAGGTTTGGGCACTCTCTTCTTTGCTATAGCCGCGACGATGGTGGCATTTGGTCCAACACTTTCGATTGTGCTCAGCAAGAGATTCAACGGGGTTTCCGTCCCTATCACCTTGCTGGCAAGTTTTCCGGTGACTCTTTTTGCTCTGCTGCAGCTTCCCTTGTTTATCCAAATGGTCCGATCCACATTTGGACAGAGTATCTTTCGCCCTAAAAAACTTGGGTAA

Protein Analysis

521

Amino Acids

58.17

Weight (kDa)

8.69

Isoelectric Point (pI)

36.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PGG PF13962 355 - 468 1.8e-25 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 683, 984
AccBSI CCGCTC 1 cut(s) 1059
AccII CGCG 2 cut(s) 1291, 1373
AciI CCGC 5 cut(s) 50, 616, 893, 1059, 1371
AclWI GGATC 1 cut(s) 1512
AcoI YGGCCR 2 cut(s) 148, 237
AcsI RAATTY 3 cut(s) 201, 634, 1087
AcuI CTGAAG 2 cut(s) 413, 1320
AdeI CACNNNGTG 2 cut(s) 26, 388
AfaI GTAC 5 cut(s) 101, 265, 483, 793, 1149
AfiI CCNNNNNNNGG 1 cut(s) 146
AgsI TTSAA 9 cut(s) 362, 566, 622, 634, 677, 767, 845, 952, 1426
AhlI ACTAGT 2 cut(s) 568, 967
AjnI CCWGG 2 cut(s) 130, 1150
AjuI GAANNNNNNNTTGG 2 cut(s) 74, 106
AleI CACNNNNGTG 1 cut(s) 1124
AluBI AGCT 8 cut(s) 62, 336, 494, 515, 920, 1175, 1238, 1492
AluI AGCT 8 cut(s) 62, 336, 494, 515, 920, 1175, 1238, 1492
Alw21I GWGCWC 2 cut(s) 1177, 1413
AlwI GGATC 1 cut(s) 1512
AlwNI CAGNNNCTG 1 cut(s) 1151
AoxI GGCC 2 cut(s) 148, 237
ApoI RAATTY 3 cut(s) 201, 634, 1087
AseI ATTAAT 1 cut(s) 824
Asp700I GAANNNNTTC 1 cut(s) 702
AspLEI GCGC 1 cut(s) 1291
AspS9I GGNCC 2 cut(s) 1391, 1513
AsuHPI GGTGA 4 cut(s) 965, 1021, 1438, 1480
AvaII GGWCC 2 cut(s) 1391, 1513
AxyI CCTNAGG 1 cut(s) 187
BaeGI GKGCMC 1 cut(s) 1352
BalI TGGCCA 2 cut(s) 150, 239
BanII GRGCYC 1 cut(s) 1177
Bbv12I GWGCWC 2 cut(s) 1177, 1413
BccI CCATC 2 cut(s) 866, 1372
BciT130I CCWGG 2 cut(s) 132, 1152
BciVI GTATCC 2 cut(s) 1072, 1222
BcuI ACTAGT 2 cut(s) 568, 967
BfaI CTAG 7 cut(s) 59, 167, 516, 569, 968, 1017, 1313
BfmI CTRYAG 3 cut(s) 941, 1365, 1487
BfuI GTATCC 2 cut(s) 1072, 1222
BglI GCCNNNNNGGC 1 cut(s) 71
BglII AGATCT 1 cut(s) 709
BlpI GCTNAGC 1 cut(s) 1412
BmcAI AGTACT 1 cut(s) 483
Bme1390I CCNGG 2 cut(s) 132, 1152
Bme18I GGWCC 2 cut(s) 1391, 1513
BmgT120I GGNCC 2 cut(s) 1391, 1513
BmiI GGNNCC 4 cut(s) 129, 856, 885, 998
BmrFI CCNGG 2 cut(s) 132, 1152
BmrI ACTGGG 1 cut(s) 163
BmsI GCATC 3 cut(s) 22, 526, 874
BmuI ACTGGG 1 cut(s) 163
Bpu1102I GCTNAGC 1 cut(s) 1412
BsaJI CCNNGG 3 cut(s) 69, 409, 1032
BsaWI WCCGGW 2 cut(s) 911, 1465
BsaXI ACNNNNNCTCC 2 cut(s) 80, 110
Bsc4I CCNNNNNNNGG 1 cut(s) 146
Bse1I ACTGG 2 cut(s) 151, 158
Bse21I CCTNAGG 1 cut(s) 187
Bse3DI GCAATG 1 cut(s) 240
BseBI CCWGG 2 cut(s) 132, 1152
BseDI CCNNGG 3 cut(s) 69, 409, 1032
BseGI GGATG 2 cut(s) 136, 1160
BseLI CCNNNNNNNGG 1 cut(s) 146
BseMI GCAATG 1 cut(s) 240
BseMII CTCAG 6 cut(s) 69, 201, 222, 399, 1044, 1426
BseNI ACTGG 2 cut(s) 151, 158
BseRI GAGGAG 3 cut(s) 140, 719, 876
BseSI GKGCMC 1 cut(s) 1352
BsgI GTGCAG 3 cut(s) 579, 795, 936
Bsh1236I CGCG 2 cut(s) 1291, 1373
BshFI GGCC 2 cut(s) 150, 239
BsiHKAI GWGCWC 2 cut(s) 1177, 1413
BsiSI CCGG 3 cut(s) 912, 994, 1466
BslFI GGGAC 1 cut(s) 1424
BslI CCNNNNNNNGG 1 cut(s) 146
BsmFI GGGAC 1 cut(s) 1424
BsnI GGCC 2 cut(s) 150, 239
Bsp1286I GDGCHC 3 cut(s) 1177, 1352, 1413
Bsp143I GATC 2 cut(s) 709, 1517
Bsp1720I GCTNAGC 1 cut(s) 1412
Bsp19I CCATGG 1 cut(s) 409
BspACI CCGC 5 cut(s) 50, 616, 893, 1059, 1371
BspANI GGCC 2 cut(s) 150, 239
BspCNI CTCAG 6 cut(s) 70, 200, 223, 398, 1045, 1425
BspFNI CGCG 2 cut(s) 1291, 1373
BspLI GGNNCC 4 cut(s) 129, 856, 885, 998
BspMAI CTGCAG 2 cut(s) 945, 1491
BspPI GGATC 1 cut(s) 1512
BsrBI CCGCTC 1 cut(s) 1059
BsrDI GCAATG 1 cut(s) 240
BsrI ACTGG 2 cut(s) 151, 158
BssECI CCNNGG 3 cut(s) 69, 409, 1032
BssMI GATC 2 cut(s) 709, 1517
BssT1I CCWWGG 3 cut(s) 69, 409, 1032
Bst2UI CCWGG 2 cut(s) 132, 1152
Bst4CI ACNGT 8 cut(s) 210, 453, 557, 661, 796, 1123, 1147, 1234
Bst6I CTCTTC 3 cut(s) 472, 894, 1361
BstC8I GCNNGC 4 cut(s) 317, 406, 1097, 1455
BstDEI CTNAG 8 cut(s) 78, 187, 231, 305, 385, 545, 1053, 1412
BstDSI CCRYGG 1 cut(s) 409
BstF5I GGATG 2 cut(s) 136, 1160
BstFNI CGCG 2 cut(s) 1291, 1373
BstHHI GCGC 1 cut(s) 1291
BstKTI GATC 2 cut(s) 712, 1520
BstMBI GATC 2 cut(s) 709, 1517
BstMWI GCNNNNNNNGC 4 cut(s) 71, 881, 1295, 1370
BstNI CCWGG 2 cut(s) 132, 1152
BstNSI RCATGY 1 cut(s) 1099
BstSCI CCNGG 2 cut(s) 130, 1150
BstSFI CTRYAG 3 cut(s) 941, 1365, 1487
BstSLI GKGCMC 1 cut(s) 1352
BstUI CGCG 2 cut(s) 1291, 1373
BstX2I RGATCY 1 cut(s) 709
BstXI CCANNNNNNTGG 1 cut(s) 1210
BstYI RGATCY 1 cut(s) 709
Bsu36I CCTNAGG 1 cut(s) 187
BsuI GTATCC 2 cut(s) 1072, 1222
BsuRI GGCC 2 cut(s) 150, 239
BtgI CCRYGG 1 cut(s) 409
BtsCI GGATG 2 cut(s) 136, 1160
BtsI GCAGTG 1 cut(s) 950
BtsIMutI CAGTG 6 cut(s) 151, 206, 393, 553, 657, 950
Cac8I GCNNGC 4 cut(s) 317, 406, 1097, 1455
CaiI CAGNNNCTG 1 cut(s) 1151
CfoI GCGC 1 cut(s) 1291
Cfr13I GGNCC 2 cut(s) 1391, 1513
Csp6I GTAC 5 cut(s) 100, 264, 482, 792, 1148
CviAII CATG 7 cut(s) 197, 410, 467, 533, 646, 776, 1096
CviQI GTAC 5 cut(s) 100, 264, 482, 792, 1148
DdeI CTNAG 8 cut(s) 78, 187, 231, 305, 385, 545, 1053, 1412
DpnI GATC 2 cut(s) 711, 1519
DpnII GATC 2 cut(s) 709, 1517
DraIII CACNNNGTG 2 cut(s) 26, 388
EaeI YGGCCR 2 cut(s) 148, 237
Eam1104I CTCTTC 3 cut(s) 472, 894, 1361
EarI CTCTTC 3 cut(s) 472, 894, 1361
Ecl136II GAGCTC 1 cut(s) 1175
Eco130I CCWWGG 3 cut(s) 69, 409, 1032
Eco24I GRGCYC 1 cut(s) 1177
Eco32I GATATC 1 cut(s) 643
Eco47I GGWCC 2 cut(s) 1391, 1513
Eco53kI GAGCTC 1 cut(s) 1175
Eco57I CTGAAG 2 cut(s) 413, 1320
Eco81I CCTNAGG 1 cut(s) 187
EcoICRI GAGCTC 1 cut(s) 1175
EcoRI GAATTC 1 cut(s) 634
EcoRII CCWGG 2 cut(s) 130, 1150
EcoRV GATATC 1 cut(s) 643
EcoT14I CCWWGG 3 cut(s) 69, 409, 1032
EcoT38I GRGCYC 1 cut(s) 1177
ErhI CCWWGG 3 cut(s) 69, 409, 1032
FaeI CATG 7 cut(s) 200, 413, 470, 536, 649, 779, 1099
FaqI GGGAC 1 cut(s) 1424
FatI CATG 7 cut(s) 196, 409, 466, 532, 645, 775, 1095
FokI GGATG 2 cut(s) 123, 1167
FriOI GRGCYC 1 cut(s) 1177
FspBI CTAG 7 cut(s) 59, 167, 516, 569, 968, 1017, 1313
GlaI GCGC 1 cut(s) 1290
HaeIII GGCC 2 cut(s) 150, 239
HapII CCGG 3 cut(s) 912, 994, 1466
HhaI GCGC 1 cut(s) 1291
Hin1II CATG 7 cut(s) 200, 413, 470, 536, 649, 779, 1099
Hin6I GCGC 1 cut(s) 1289
HinP1I GCGC 1 cut(s) 1289
HinfI GANTC 8 cut(s) 289, 368, 698, 845, 1010, 1316, 1422, 1471
HpaII CCGG 3 cut(s) 912, 994, 1466
HphI GGTGA 4 cut(s) 965, 1021, 1438, 1480
Hpy166II GTNNAC 2 cut(s) 367, 973
Hpy188I TCNGA 5 cut(s) 79, 432, 640, 1228, 1517
Hpy188III TCNNGA 2 cut(s) 230, 707
Hpy8I GTNNAC 2 cut(s) 367, 973
Hpy99I CGWCG 1 cut(s) 1378
HpyAV CCTTC 3 cut(s) 32, 437, 1163
HpyCH4III ACNGT 8 cut(s) 210, 453, 557, 661, 796, 1123, 1147, 1234
HpyCH4IV ACGT 2 cut(s) 577, 1082
HpyF10VI GCNNNNNNNGC 4 cut(s) 71, 881, 1295, 1370
HpyF3I CTNAG 8 cut(s) 78, 187, 231, 305, 385, 545, 1053, 1412
HpySE526I ACGT 2 cut(s) 577, 1082
Hsp92II CATG 7 cut(s) 200, 413, 470, 536, 649, 779, 1099
HspAI GCGC 1 cut(s) 1289
Kzo9I GATC 2 cut(s) 709, 1517
LmnI GCTCC 6 cut(s) 60, 127, 491, 889, 1172, 1180
LweI GCATC 3 cut(s) 22, 526, 874
MaeI CTAG 7 cut(s) 59, 167, 516, 569, 968, 1017, 1313
MaeII ACGT 2 cut(s) 577, 1082
MaeIII GTNAC 5 cut(s) 112, 747, 1157, 1317, 1468
MalI GATC 2 cut(s) 711, 1519
MbiI CCGCTC 1 cut(s) 1059
MboI GATC 2 cut(s) 709, 1517
MflI RGATCY 1 cut(s) 709
MhlI GDGCHC 3 cut(s) 1177, 1352, 1413
MlsI TGGCCA 2 cut(s) 150, 239
MluCI AATT 9 cut(s) 201, 622, 634, 678, 821, 1022, 1043, 1087, 1179
MluNI TGGCCA 2 cut(s) 150, 239
MlyI GAGTC 3 cut(s) 362, 1325, 1465
MmeI TCCRAC 1 cut(s) 1418
MnlI CCTC 8 cut(s) 118, 196, 594, 737, 740, 897, 949, 1323
Mox20I TGGCCA 2 cut(s) 150, 239
MroXI GAANNNNTTC 1 cut(s) 702
MscI TGGCCA 2 cut(s) 150, 239
MseI TTAA 5 cut(s) 219, 473, 498, 824, 1253
MslI CAYNNNNRTG 3 cut(s) 414, 555, 1124
Msp20I TGGCCA 2 cut(s) 150, 239
MspA1I CMGCKG 1 cut(s) 52
MspI CCGG 3 cut(s) 912, 994, 1466
MspR9I CCNGG 2 cut(s) 132, 1152
MvaI CCWGG 2 cut(s) 132, 1152
MvnI CGCG 2 cut(s) 1291, 1373
MwoI GCNNNNNNNGC 4 cut(s) 71, 881, 1295, 1370
NcoI CCATGG 1 cut(s) 409
NdeII GATC 2 cut(s) 709, 1517
NlaIII CATG 7 cut(s) 200, 413, 470, 536, 649, 779, 1099
NlaIV GGNNCC 4 cut(s) 129, 856, 885, 998
NmuCI GTSAC 2 cut(s) 1317, 1468
NspI RCATGY 1 cut(s) 1099
OliI CACNNNNGTG 1 cut(s) 1124
PaeI GCATGC 1 cut(s) 1099
PcsI WCGNNNNNNNCGW 1 cut(s) 1434
PdmI GAANNNNTTC 1 cut(s) 702
PfeI GAWTC 5 cut(s) 289, 698, 845, 1010, 1422
PleI GAGTC 3 cut(s) 362, 1324, 1465
PpsI GAGTC 3 cut(s) 362, 1324, 1465
PshBI ATTAAT 1 cut(s) 824
PsiI TTATAA 2 cut(s) 683, 984
Psp124BI GAGCTC 1 cut(s) 1177
Psp6I CCWGG 2 cut(s) 130, 1150
PspGI CCWGG 2 cut(s) 130, 1150
PspN4I GGNNCC 4 cut(s) 129, 856, 885, 998
PspPI GGNCC 2 cut(s) 1391, 1513
PstI CTGCAG 2 cut(s) 945, 1491
PstNI CAGNNNCTG 1 cut(s) 1151
PsuI RGATCY 1 cut(s) 709
RsaI GTAC 5 cut(s) 101, 265, 483, 793, 1149
RsaNI GTAC 5 cut(s) 100, 264, 482, 792, 1148
RseI CAYNNNNRTG 3 cut(s) 414, 555, 1124
SacI GAGCTC 1 cut(s) 1177
SaqAI TTAA 5 cut(s) 219, 473, 498, 824, 1253
Sau3AI GATC 2 cut(s) 709, 1517
Sau96I GGNCC 2 cut(s) 1391, 1513
ScaI AGTACT 1 cut(s) 483
SchI GAGTC 3 cut(s) 362, 1325, 1465
ScrFI CCNGG 2 cut(s) 132, 1152
SduI GDGCHC 3 cut(s) 1177, 1352, 1413
SfaNI GCATC 3 cut(s) 22, 526, 874
SfcI CTRYAG 3 cut(s) 941, 1365, 1487
SinI GGWCC 2 cut(s) 1391, 1513
SmiMI CAYNNNNRTG 3 cut(s) 414, 555, 1124
SpeI ACTAGT 2 cut(s) 568, 967
SphI GCATGC 1 cut(s) 1099
Sse9I AATT 9 cut(s) 201, 622, 634, 678, 821, 1022, 1043, 1087, 1179
SsiI CCGC 5 cut(s) 50, 616, 893, 1059, 1371
SspI AATATT 1 cut(s) 743
SspMI CTAG 7 cut(s) 59, 167, 516, 569, 968, 1017, 1313
SstI GAGCTC 1 cut(s) 1177
StyD4I CCNGG 2 cut(s) 130, 1150
StyI CCWWGG 3 cut(s) 69, 409, 1032
TaaI ACNGT 8 cut(s) 210, 453, 557, 661, 796, 1123, 1147, 1234
TaiI ACGT 2 cut(s) 580, 1085
TaqI TCGA 2 cut(s) 772, 1403
TasI AATT 9 cut(s) 201, 622, 634, 678, 821, 1022, 1043, 1087, 1179
TatI WGTACW 2 cut(s) 263, 481
TauI GCSGC 1 cut(s) 1373
TfiI GAWTC 5 cut(s) 289, 698, 845, 1010, 1422
Tru1I TTAA 5 cut(s) 219, 473, 498, 824, 1253
Tru9I TTAA 5 cut(s) 219, 473, 498, 824, 1253
TscAI CASTG 6 cut(s) 158, 213, 393, 560, 664, 950
TseFI GTSAC 2 cut(s) 1317, 1468
Tsp45I GTSAC 2 cut(s) 1317, 1468
TspDTI ATGAA 3 cut(s) 213, 455, 792
TspGWI ACGGA 2 cut(s) 1020, 1426
TspRI CASTG 6 cut(s) 158, 213, 393, 560, 664, 950
VpaK11BI GGWCC 2 cut(s) 1391, 1513
VspI ATTAAT 1 cut(s) 824
XapI RAATTY 3 cut(s) 201, 634, 1087
XceI RCATGY 1 cut(s) 1099
XcmI CCANNNNNNNNNTGG 2 cut(s) 714, 865
XmnI GAANNNNTTC 1 cut(s) 702
XspI CTAG 7 cut(s) 59, 167, 516, 569, 968, 1017, 1313
ZrmI AGTACT 1 cut(s) 483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.