Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0002012

Physical Location & Seq

Genomic Coordinates Forward (+)

7396511 .. 7400908

Gene Structure 4398 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG094100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGACGGTTCTTAGGTCGCGGGAGATTGCCCCGCCCAAAACGACGCCGCAGGGCCCCAAAACGCGGCCCAAATCAGACCCATCCACGCCAGCCGAAACCCCCGAGTCCGTTACTACTACTACTACTACCCCTCCGCCTCTTAATTCCACCCCTTCCTCCCAATCCCAATCCCAAAACCCTAATTCCAATCCCAATCCGAAGGCCACCGATTCGGGCTCTGCCACCGGATTATTGCGGCGGCGCAGTCTCCGTCTCGCTTCGAAAACTCCCGAGGGTTCCGCCAAGAGGAATACCCAAATTGACGAAGTGGGTTTTGATTTGTTTGGAGAGAGGGTTACGGTCATGGGAGTTGAGAAACGGGCTGAGGAGTTGAAATTGGGTTCTGGGTTAGACCCGGTGACCCGATTGAGTGGGAAAGGTTCGGGCTTTGGAGAGGAGGAGAAGGTTGGAGTTGATGAGGGTTTGACTGAATTAGGGCTTAGTTCTGATTTGGGAGTTTTGGGGGGTAATAGTGAGGAGAAGAAGAAGAGGAAGTTGGACATTGATATCAATTTACCGGCTTGGGAATGTGAAGAGGAAGATGGAGGAAGTAAACCTTTTTTGAGCTTGCGATCGGGGAAGAGAGTTGCTAAGCCAGGAGTGGATGGTGTTGGTAATGGGGAATGGGTAATTGATTTGAGTGCTGATAAGAGTGGTGGTGTGAAGAGCAAAGGTGAATGTGGAAGAGGAGAGAGAGGGAAGGGGAAGTTGGGTGAGAATAGTATTTATGTGGTGGTATTGGATTCGGATGAGGAAGTTGAGAGGTCCGGTGAGAATGTGTTTCAGAGTGATCTTCCGAGTGGGGGGAGTTCTACAGGGAAGAGGAAGTTGAGTGATGCAATTGAAATTGTTGTTGAAGATTCGGAGGATGAAATGAGTTCCGGTGAGAATGGTGTAAATGAGGGCAGAAGGAAGTACAGCAGACAAGAAAAAGGGAAGGAGAAGTTGGTTGGAGGAGCTTTGTTATCGAATGATGATGACAAAGTGGAATTGGGTTTGGGATTAGAAGTGTTGAGTTCATTGCACAATGTGGTTCCTAGTCCTACTCAGATAAGGGAGAATGAAGCATTGCAAGATGAAATGCAGGCTAGGAACAGTAATAGAAGAGAGAATGGAAGAGACAGGAATCAATACATGGAACGGTTTCGGGACATAGCCAGGCAAAATGCTTCTCGTTTTGCTCGTTTTGATCCTCGAGAGGAAGAGGAGAATGATATGCCTCCTCAGGTTGATGTGGAACAAGATGTCGAAGATTGGCCTGGTCCCTTTTCTACTGCTATGAGGATTATGAGAGATGGAGCAGAAAAGAATATGCAAGAGCAGAGGGCCTATACAGGCAAGACAAAACCTGCATTGGTGAACTGGGTTCCCAAGTGTCAGGAACAGGATCGTGCAATATCAAAGAATTTGATCCCCTCATTGCAAGAGTTGTGTTTGTCTGTTCTTGCTATGAATGCCGATGCAATAGTTTCACTTGAGAGTGTACCAGATGCTTTGAGGCACCAACTCAGTCATCTGCTCTGTGATTCTAGAAGAATGAATACTCATTTTTTCGAACTTCTTGTTCAAGGATCACCAACAGAGGTTCGCTTAAGGGATTGCTCATGGTTGACAGAGGAAGAGTTCACAAAATCTTTTCAGCAGTGCGACATTAGCAACTTAACAGTACTACAGCTTGACCAATGTGGCCGCTGTCTGCCAGATTATATATTGAATTCTACCTTAGCTCGGTCATCCAATTGCTTGCCTGTTTTAACTTCTTTGTCCCTCAGTGGTGCATGTCGTCTTTCGGATGTTGGGTTAGGTGCACTTGTTTCTTCTGCCCCTGCACTAAGATCTCTGAATCTCAGCCAGTGCTCGCTTCTCACTTCCTCAAGTATCGACACTTTAGCTAATTCATTGGGATCAGTGCTGAGGGAACTATATTTAAATGATTGCCAAAGCATTAATGCTATGCTGATATTACCAGCCTTAGAGAAGTTTGAGCATTTGGAGGTGTTGTGGCTGCCCGGCATTGAAAATGTTTGTGATGATTTTATTAAGAAGTTTATTACTGCTCGTGGCCATAATTTGAAGGAGCTTATTTTGACTAATTGCATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_6

Protein Analysis

713

Amino Acids

78.06

Weight (kDa)

5.06

Isoelectric Point (pI)

53.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002012)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G06040
fragaria_vesca	FvH4_1g08600 FvH4_1g08600 FvH4_1g08610 FvH4_1g08610
malus_domestica	MD02G1090200.v1.1 MD02G1090300.v1.1 MD02G1090400.v1.1 MD15G1216800.v1.1 MD15G1217000.v1.1
prunus_persica	Prupe.7G199500_v2.0.a1 Prupe.7G199600_v2.0.a1 Prupe.7G199800_v2.0.a1 Prupe.7G199800_v2.0.a1
pyrus_communis	pycom02g07210 pycom02g07220 pycom02g07230 pycom15g19230 pycom15g19240
rosa_chinensis	RchiOBHm_Chr2g0093971 RchiOBHm_Chr2g0094821 RchiOBHm_Chr2g0094831 RchiOBHm_Chr5g0043671
rosa_laevigata	RLG00000016524
rosa_multiflora	Rmu_sc0003027.1_g000001 Rmu_sc0006422.1_g000027 Rmu_sc0018486.1_g000002
rosa_roxburghii	Rroxscaffold_1G00075090 Rroxscaffold_2G00146830 Rroxscaffold_2G00146840
rosa_rugosa	Rorug02G0047100 Rorug02G0047100 Rorug02G0054500 Rorug02G0054600 Rorug02G0054700
rosa_samantha	Rh2AG094700 Rh2AG094800 Rh2BG095300 Rh2BG095400 Rh2CG097100 Rh2CG097200 Rh2CG097300 Rh2DG094100 Rh2DG094200 Rh7BG370500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1396
AccB1I	GGYRCC	1 cut(s)	1539
AccII	CGCG	2 cut(s)	19, 64
AciI	CCGC	9 cut(s)	19, 32, 47, 64, 134, 235, 238, 279, 1729
AclWI	GGATC	5 cut(s)	1223, 1434, 1444, 1618, 1951
AcoI	YGGCCR	2 cut(s)	1726, 2101
AcsI	RAATTY	2 cut(s)	1444, 1753
AcyI	GRCGYC	1 cut(s)	44
AdeI	CACNNNGTG	1 cut(s)	1069
AfaI	GTAC	3 cut(s)	956, 1524, 1707
AfiI	CCNNNNNNNGG	4 cut(s)	63, 285, 842, 1767
AflII	CTTAAG	1 cut(s)	1630
AgsI	TTSAA	7 cut(s)	373, 884, 896, 1607, 1753, 2057, 2113
AjnI	CCWGG	3 cut(s)	634, 1196, 1297
AjuI	GAANNNNNNNTTGG	6 cut(s)	518, 550, 731, 763, 968, 1000
AluBI	AGCT	6 cut(s)	606, 998, 1714, 1766, 1931, 2119
AluI	AGCT	6 cut(s)	606, 998, 1714, 1766, 1931, 2119
Alw21I	GWGCWC	2 cut(s)	1849, 1898
Alw26I	GTCTC	3 cut(s)	251, 257, 1152
Alw44I	GTGCAC	1 cut(s)	1845
AlwI	GGATC	5 cut(s)	1223, 1434, 1444, 1618, 1951
Ama87I	CYCGRG	3 cut(s)	101, 269, 1233
AoxI	GGCC	7 cut(s)	52, 65, 201, 1295, 1365, 1726, 2101
ApaI	GGGCCC	1 cut(s)	56
ApaLI	GTGCAC	1 cut(s)	1845
ApeKI	GCWGC	1 cut(s)	2044
ApoI	RAATTY	2 cut(s)	1444, 1753
AseI	ATTAAT	1 cut(s)	1986
Asp700I	GAANNNNTTC	1 cut(s)	1182
AspLEI	GCGC	1 cut(s)	243
AspS9I	GGNCC	6 cut(s)	52, 53, 66, 804, 1301, 1365
AsuC2I	CCSGG	2 cut(s)	395, 2049
AsuHPI	GGTGA	7 cut(s)	409, 725, 764, 821, 935, 1408, 1605
AsuII	TTCGAA	2 cut(s)	260, 1593
AvaI	CYCGRG	3 cut(s)	101, 269, 1233
AvaII	GGWCC	2 cut(s)	804, 1301
AxyI	CCTNAGG	1 cut(s)	1263
BaeGI	GKGCMC	2 cut(s)	56, 1849
BalI	TGGCCA	1 cut(s)	2103
BanI	GGYRCC	1 cut(s)	1539
BanII	GRGCYC	2 cut(s)	56, 218
BarI	GAAGNNNNNNTAC	2 cut(s)	1564, 1596
BauI	CACGAG	1 cut(s)	2097
Bbv12I	GWGCWC	2 cut(s)	1849, 1898
BbvCI	CCTCAGC	2 cut(s)	363, 1952
BbvI	GCAGC	1 cut(s)	2031
BccI	CCATC	4 cut(s)	88, 575, 638, 1328
BciT130I	CCWGG	3 cut(s)	636, 1198, 1299
BcnI	CCSGG	2 cut(s)	395, 2049
BcoDI	GTCTC	3 cut(s)	251, 257, 1152
BfaI	CTAG	3 cut(s)	1077, 1128, 1569
BfmI	CTRYAG	2 cut(s)	852, 1709
BfrI	CTTAAG	1 cut(s)	1630
BfuAI	ACCTGC	1 cut(s)	1396
BglII	AGATCT	1 cut(s)	1874
BisI	GCNGC	6 cut(s)	47, 65, 236, 239, 1729, 2045
BlpI	GCTNAGC	1 cut(s)	630
BlsI	GCNGC	6 cut(s)	48, 66, 237, 240, 1730, 2046
BmcAI	AGTACT	1 cut(s)	1707
Bme1390I	CCNGG	5 cut(s)	395, 636, 1198, 1299, 2049
Bme18I	GGWCC	2 cut(s)	804, 1301
BmeT110I	CYCGRG	3 cut(s)	101, 269, 1233
BmgT120I	GGNCC	6 cut(s)	52, 53, 66, 804, 1301, 1365
BmiI	GGNNCC	7 cut(s)	54, 55, 277, 1074, 1303, 1407, 1541
BmrFI	CCNGG	5 cut(s)	395, 636, 1198, 1299, 2049
BmrI	ACTGGG	1 cut(s)	1411
BmsI	GCATC	3 cut(s)	865, 1489, 1519
BmuI	ACTGGG	1 cut(s)	1411
Bpu10I	CCTNAGC	3 cut(s)	363, 1762, 1952
Bpu1102I	GCTNAGC	1 cut(s)	630
Bpu14I	TTCGAA	2 cut(s)	260, 1593
BpuEI	CTTGAG	2 cut(s)	1535, 1897
BpuMI	CCSGG	2 cut(s)	395, 2049
BsaHI	GRCGYC	1 cut(s)	44
BsaJI	CCNNGG	1 cut(s)	270
BsaWI	WCCGGW	3 cut(s)	224, 806, 920
BsaXI	ACNNNNNCTCC	6 cut(s)	115, 145, 318, 348, 2024, 2054
Bsc4I	CCNNNNNNNGG	4 cut(s)	63, 285, 842, 1767
Bse118I	RCCGGY	1 cut(s)	556
Bse1I	ACTGG	2 cut(s)	1406, 1891
Bse21I	CCTNAGG	1 cut(s)	1263
Bse3DI	GCAATG	3 cut(s)	1058, 1106, 1457
BseBI	CCWGG	3 cut(s)	636, 1198, 1299
BseDI	CCNNGG	1 cut(s)	270
BseGI	GGATG	6 cut(s)	80, 649, 793, 913, 1772, 1837
BseLI	CCNNNNNNNGG	4 cut(s)	63, 285, 842, 1767
BseMI	GCAATG	3 cut(s)	1058, 1106, 1457
BseMII	CTCAG	7 cut(s)	354, 1100, 1277, 1561, 1822, 1900, 1943
BseNI	ACTGG	2 cut(s)	1406, 1891
BseRI	GAGGAG	8 cut(s)	380, 449, 452, 530, 741, 1008, 1251, 1259
BseSI	GKGCMC	2 cut(s)	56, 1849
BseXI	GCAGC	1 cut(s)	2031
BsgI	GTGCAG	1 cut(s)	1851
Bsh1236I	CGCG	2 cut(s)	19, 64
Bsh1285I	CGRYCG	1 cut(s)	614
BshFI	GGCC	7 cut(s)	54, 67, 203, 1297, 1367, 1728, 2103
BshNI	GGYRCC	1 cut(s)	1539
BsiEI	CGRYCG	1 cut(s)	614
BsiHKAI	GWGCWC	2 cut(s)	1849, 1898
BsiHKCI	CYCGRG	3 cut(s)	101, 269, 1233
BsiSI	CCGG	6 cut(s)	225, 395, 557, 807, 921, 2049
BslFI	GGGAC	3 cut(s)	1202, 1287, 1789
BslI	CCNNNNNNNGG	4 cut(s)	63, 285, 842, 1767
BsmAI	GTCTC	3 cut(s)	251, 257, 1152
BsmBI	CGTCTC	1 cut(s)	257
BsmFI	GGGAC	3 cut(s)	1202, 1287, 1789
BsmI	GAATGC	1 cut(s)	1498
BsnI	GGCC	7 cut(s)	54, 67, 203, 1297, 1367, 1728, 2103
BsoBI	CYCGRG	3 cut(s)	101, 269, 1233
Bsp119I	TTCGAA	2 cut(s)	260, 1593
Bsp120I	GGGCCC	1 cut(s)	52
Bsp1286I	GDGCHC	4 cut(s)	56, 218, 1849, 1898
Bsp143I	GATC	8 cut(s)	611, 829, 1228, 1426, 1449, 1610, 1874, 1943
Bsp1720I	GCTNAGC	1 cut(s)	630
BspACI	CCGC	9 cut(s)	19, 32, 47, 64, 134, 235, 238, 279, 1729
BspANI	GGCC	7 cut(s)	54, 67, 203, 1297, 1367, 1728, 2103
BspCNI	CTCAG	7 cut(s)	355, 1099, 1276, 1560, 1821, 1899, 1944
BspFNI	CGCG	2 cut(s)	19, 64
BspLI	GGNNCC	7 cut(s)	54, 55, 277, 1074, 1303, 1407, 1541
BspMI	ACCTGC	1 cut(s)	1396
BspPI	GGATC	5 cut(s)	1223, 1434, 1444, 1618, 1951
BspQI	GCTCTTC	1 cut(s)	698
BspT104I	TTCGAA	2 cut(s)	260, 1593
BspT107I	GGYRCC	1 cut(s)	1539
BspTI	CTTAAG	1 cut(s)	1630
BsrDI	GCAATG	3 cut(s)	1058, 1106, 1457
BsrFI	RCCGGY	1 cut(s)	556
BsrI	ACTGG	2 cut(s)	1406, 1891
BssAI	RCCGGY	1 cut(s)	556
BssECI	CCNNGG	1 cut(s)	270
BssMI	GATC	8 cut(s)	611, 829, 1228, 1426, 1449, 1610, 1874, 1943
BssNI	GRCGYC	1 cut(s)	44
BssSI	CACGAG	1 cut(s)	2097
Bst2BI	CACGAG	1 cut(s)	2097
Bst2UI	CCWGG	3 cut(s)	636, 1198, 1299
Bst4CI	ACNGT	5 cut(s)	7, 340, 1136, 1182, 1705
BstACI	GRCGYC	1 cut(s)	44
BstAFI	CTTAAG	1 cut(s)	1630
BstBI	TTCGAA	2 cut(s)	260, 1593
BstC8I	GCNNGC	5 cut(s)	90, 608, 1125, 1784, 1898
BstEII	GGTNACC	1 cut(s)	397
BstF5I	GGATG	6 cut(s)	80, 649, 793, 913, 1772, 1837
BstFNI	CGCG	2 cut(s)	19, 64
BstHHI	GCGC	1 cut(s)	243
BstKTI	GATC	8 cut(s)	614, 832, 1231, 1429, 1452, 1613, 1877, 1946
BstMAI	GTCTC	3 cut(s)	251, 257, 1152
BstMBI	GATC	8 cut(s)	611, 829, 1228, 1426, 1449, 1610, 1874, 1943
BstMCI	CGRYCG	1 cut(s)	614
BstMWI	GCNNNNNNNGC	2 cut(s)	1493, 1692
BstNI	CCWGG	3 cut(s)	636, 1198, 1299
BstNSI	RCATGY	2 cut(s)	1821, 2140
BstPI	GGTNACC	1 cut(s)	397
BstSCI	CCNGG	5 cut(s)	393, 634, 1196, 1297, 2047
BstSFI	CTRYAG	2 cut(s)	852, 1709
BstSLI	GKGCMC	2 cut(s)	56, 1849
BstUI	CGCG	2 cut(s)	19, 64
BstV1I	GCAGC	1 cut(s)	2031
BstX2I	RGATCY	1 cut(s)	1874
BstYI	RGATCY	1 cut(s)	1874
Bsu36I	CCTNAGG	1 cut(s)	1263
BsuRI	GGCC	7 cut(s)	54, 67, 203, 1297, 1367, 1728, 2103
BtsCI	GGATG	6 cut(s)	80, 649, 793, 913, 1772, 1837
BtsI	GCAGTG	1 cut(s)	1688
BtsIMutI	CAGTG	4 cut(s)	1688, 1816, 1898, 1953
BveI	ACCTGC	1 cut(s)	1396
Cac8I	GCNNGC	5 cut(s)	90, 608, 1125, 1784, 1898
CfoI	GCGC	1 cut(s)	243
Cfr10I	RCCGGY	1 cut(s)	556
Cfr13I	GGNCC	6 cut(s)	52, 53, 66, 804, 1301, 1365
CseI	GACGC	1 cut(s)	52
Csp6I	GTAC	3 cut(s)	955, 1523, 1706
CviAII	CATG	5 cut(s)	343, 1174, 1644, 1818, 2137
CviQI	GTAC	3 cut(s)	955, 1523, 1706
DpnI	GATC	8 cut(s)	613, 831, 1230, 1428, 1451, 1612, 1876, 1945
DpnII	GATC	8 cut(s)	611, 829, 1228, 1426, 1449, 1610, 1874, 1943
DraI	TTTAAA	1 cut(s)	1968
DraIII	CACNNNGTG	1 cut(s)	1069
EaeI	YGGCCR	2 cut(s)	1726, 2101
EciI	GGCGGA	2 cut(s)	123, 268
Eco24I	GRGCYC	2 cut(s)	56, 218
Eco32I	GATATC	1 cut(s)	547
Eco47I	GGWCC	2 cut(s)	804, 1301
Eco81I	CCTNAGG	1 cut(s)	1263
Eco88I	CYCGRG	3 cut(s)	101, 269, 1233
Eco91I	GGTNACC	1 cut(s)	397
EcoO109I	RGGNCCY	3 cut(s)	52, 53, 1365
EcoO65I	GGTNACC	1 cut(s)	397
EcoRI	GAATTC	1 cut(s)	1753
EcoRII	CCWGG	3 cut(s)	634, 1196, 1297
EcoRV	GATATC	1 cut(s)	547
EcoT38I	GRGCYC	2 cut(s)	56, 218
Esp3I	CGTCTC	1 cut(s)	257
FaeI	CATG	5 cut(s)	346, 1177, 1647, 1821, 2140
FalI	AAGNNNNNCTT	2 cut(s)	580, 612
FaqI	GGGAC	3 cut(s)	1202, 1287, 1789
FatI	CATG	5 cut(s)	342, 1173, 1643, 1817, 2136
FauI	CCCGC	2 cut(s)	12, 39
Fnu4HI	GCNGC	6 cut(s)	47, 65, 236, 239, 1729, 2045
FokI	GGATG	6 cut(s)	67, 656, 800, 920, 1759, 1844
FriOI	GRGCYC	2 cut(s)	56, 218
Fsp4HI	GCNGC	6 cut(s)	47, 65, 236, 239, 1729, 2045
FspBI	CTAG	3 cut(s)	1077, 1128, 1569
GlaI	GCGC	1 cut(s)	242
GluI	GCNGC	6 cut(s)	47, 65, 236, 239, 1729, 2045
HaeIII	GGCC	7 cut(s)	54, 67, 203, 1297, 1367, 1728, 2103
HapII	CCGG	6 cut(s)	225, 395, 557, 807, 921, 2049
HgaI	GACGC	1 cut(s)	52
HhaI	GCGC	1 cut(s)	243
Hin1I	GRCGYC	1 cut(s)	44
Hin1II	CATG	5 cut(s)	346, 1177, 1647, 1821, 2140
Hin6I	GCGC	1 cut(s)	241
HinP1I	GCGC	1 cut(s)	241
HincII	GTYRAC	1 cut(s)	1650
HindII	GTYRAC	1 cut(s)	1650
HinfI	GANTC	7 cut(s)	104, 209, 782, 899, 1165, 1565, 1882
HpaII	CCGG	6 cut(s)	225, 395, 557, 807, 921, 2049
HphI	GGTGA	7 cut(s)	409, 725, 764, 821, 935, 1408, 1605
Hpy166II	GTNNAC	6 cut(s)	593, 1399, 1523, 1650, 1665, 1847
Hpy188III	TCNNGA	5 cut(s)	269, 1187, 1235, 1418, 1569
Hpy8I	GTNNAC	6 cut(s)	593, 1399, 1523, 1650, 1665, 1847
Hpy99I	CGWCG	1 cut(s)	46
HpyAV	CCTTC	7 cut(s)	162, 193, 436, 733, 942, 970, 2107
HpyCH4III	ACNGT	5 cut(s)	7, 340, 1136, 1182, 1705
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1493, 1692
Hsp92I	GRCGYC	1 cut(s)	44
Hsp92II	CATG	5 cut(s)	346, 1177, 1647, 1821, 2140
HspAI	GCGC	1 cut(s)	241
Kzo9I	GATC	8 cut(s)	611, 829, 1228, 1426, 1449, 1610, 1874, 1943
LguI	GCTCTTC	1 cut(s)	698
LmnI	GCTCC	3 cut(s)	995, 1337, 2116
Lsp1109I	GCAGC	1 cut(s)	2031
LweI	GCATC	3 cut(s)	865, 1489, 1519
MaeI	CTAG	3 cut(s)	1077, 1128, 1569
MaeIII	GTNAC	3 cut(s)	109, 334, 397
MalI	GATC	8 cut(s)	613, 831, 1230, 1428, 1451, 1612, 1876, 1945
MboI	GATC	8 cut(s)	611, 829, 1228, 1426, 1449, 1610, 1874, 1943
MfeI	CAATTG	2 cut(s)	879, 1777
MflI	RGATCY	1 cut(s)	1874
MhlI	GDGCHC	4 cut(s)	56, 218, 1849, 1898
MlsI	TGGCCA	1 cut(s)	2103
MluNI	TGGCCA	1 cut(s)	2103
MlyI	GAGTC	1 cut(s)	113
MmeI	TCCRAC	3 cut(s)	427, 516, 970
Mox20I	TGGCCA	1 cut(s)	2103
MroXI	GAANNNNTTC	1 cut(s)	1182
MscI	TGGCCA	1 cut(s)	2103
MseI	TTAA	7 cut(s)	141, 1631, 1700, 1793, 1967, 1986, 2079
Msp20I	TGGCCA	1 cut(s)	2103
MspA1I	CMGCKG	1 cut(s)	1731
MspCI	CTTAAG	1 cut(s)	1630
MspI	CCGG	6 cut(s)	225, 395, 557, 807, 921, 2049
MspR9I	CCNGG	5 cut(s)	395, 636, 1198, 1299, 2049
MunI	CAATTG	2 cut(s)	879, 1777
Mva1269I	GAATGC	1 cut(s)	1498
MvaI	CCWGG	3 cut(s)	636, 1198, 1299
MvnI	CGCG	2 cut(s)	19, 64
MwoI	GCNNNNNNNGC	2 cut(s)	1493, 1692
NciI	CCSGG	2 cut(s)	395, 2049
NdeII	GATC	8 cut(s)	611, 829, 1228, 1426, 1449, 1610, 1874, 1943
NlaIII	CATG	5 cut(s)	346, 1177, 1647, 1821, 2140
NlaIV	GGNNCC	7 cut(s)	54, 55, 277, 1074, 1303, 1407, 1541
NmuCI	GTSAC	1 cut(s)	397
NspI	RCATGY	2 cut(s)	1821, 2140
NspV	TTCGAA	2 cut(s)	260, 1593
PaeR7I	CTCGAG	1 cut(s)	1233
PciSI	GCTCTTC	1 cut(s)	698
PcsI	WCGNNNNNNNCGW	1 cut(s)	1219
PctI	GAATGC	1 cut(s)	1498
PdmI	GAANNNNTTC	1 cut(s)	1182
PfeI	GAWTC	6 cut(s)	209, 782, 899, 1165, 1565, 1882
PkrI	GCNGC	6 cut(s)	48, 66, 237, 240, 1730, 2046
Ple19I	CGATCG	1 cut(s)	614
PleI	GAGTC	1 cut(s)	112
PpsI	GAGTC	1 cut(s)	112
PshBI	ATTAAT	1 cut(s)	1986
Psp6I	CCWGG	3 cut(s)	634, 1196, 1297
PspEI	GGTNACC	1 cut(s)	397
PspGI	CCWGG	3 cut(s)	634, 1196, 1297
PspN4I	GGNNCC	7 cut(s)	54, 55, 277, 1074, 1303, 1407, 1541
PspOMI	GGGCCC	1 cut(s)	52
PspPI	GGNCC	6 cut(s)	52, 53, 66, 804, 1301, 1365
PsuI	RGATCY	1 cut(s)	1874
PvuI	CGATCG	1 cut(s)	614
RsaI	GTAC	3 cut(s)	956, 1524, 1707
RsaNI	GTAC	3 cut(s)	955, 1523, 1706
SapI	GCTCTTC	1 cut(s)	698
SaqAI	TTAA	7 cut(s)	141, 1631, 1700, 1793, 1967, 1986, 2079
SatI	GCNGC	6 cut(s)	47, 65, 236, 239, 1729, 2045
Sau3AI	GATC	8 cut(s)	611, 829, 1228, 1426, 1449, 1610, 1874, 1943
Sau96I	GGNCC	6 cut(s)	52, 53, 66, 804, 1301, 1365
ScaI	AGTACT	1 cut(s)	1707
SchI	GAGTC	1 cut(s)	113
ScrFI	CCNGG	5 cut(s)	395, 636, 1198, 1299, 2049
SduI	GDGCHC	4 cut(s)	56, 218, 1849, 1898
SfaNI	GCATC	3 cut(s)	865, 1489, 1519
SfcI	CTRYAG	2 cut(s)	852, 1709
Sfr274I	CTCGAG	1 cut(s)	1233
SfuI	TTCGAA	2 cut(s)	260, 1593
SinI	GGWCC	2 cut(s)	804, 1301
SlaI	CTCGAG	1 cut(s)	1233
SmiI	ATTTAAAT	1 cut(s)	1968
SmlI	CTYRAG	4 cut(s)	1233, 1514, 1630, 1912
SmoI	CTYRAG	4 cut(s)	1233, 1514, 1630, 1912
SsiI	CCGC	9 cut(s)	19, 32, 47, 64, 134, 235, 238, 279, 1729
SspMI	CTAG	3 cut(s)	1077, 1128, 1569
StyD4I	CCNGG	5 cut(s)	393, 634, 1196, 1297, 2047
SwaI	ATTTAAAT	1 cut(s)	1968
TaaI	ACNGT	5 cut(s)	7, 340, 1136, 1182, 1705
TaqI	TCGA	6 cut(s)	260, 1007, 1234, 1287, 1593, 1920
TaqII	GACCGA	1 cut(s)	1758
TatI	WGTACW	2 cut(s)	954, 1705
TauI	GCSGC	5 cut(s)	49, 67, 238, 241, 1731
TfiI	GAWTC	6 cut(s)	209, 782, 899, 1165, 1565, 1882
Tru1I	TTAA	7 cut(s)	141, 1631, 1700, 1793, 1967, 1986, 2079
Tru9I	TTAA	7 cut(s)	141, 1631, 1700, 1793, 1967, 1986, 2079
TscAI	CASTG	4 cut(s)	1688, 1816, 1898, 1953
TseFI	GTSAC	1 cut(s)	397
TseI	GCWGC	1 cut(s)	2044
Tsp45I	GTSAC	1 cut(s)	397
TspDTI	ATGAA	7 cut(s)	924, 1047, 1116, 1131, 1505, 1592, 1926
TspGWI	ACGGA	2 cut(s)	97, 239
TspRI	CASTG	4 cut(s)	1688, 1816, 1898, 1953
Vha464I	CTTAAG	1 cut(s)	1630
VneI	GTGCAC	1 cut(s)	1845
VpaK11BI	GGWCC	2 cut(s)	804, 1301
VspI	ATTAAT	1 cut(s)	1986
XapI	RAATTY	2 cut(s)	1444, 1753
XbaI	TCTAGA	1 cut(s)	1568
XceI	RCATGY	2 cut(s)	1821, 2140
XhoI	CTCGAG	1 cut(s)	1233
XmnI	GAANNNNTTC	1 cut(s)	1182
XspI	CTAG	3 cut(s)	1077, 1128, 1569
ZrmI	AGTACT	1 cut(s)	1707

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.