Prupe.7G199800_v2.0.a1

Leucine-rich repeats, outliers

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
18698568 .. 18703511
4944 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G199800.1

Sequence Viewer

Length: 2733 bp
ATGACGGTTCTTAGGTCCCGCGAGATCATCGCTTCCACCAAAACGGCGCCGCACAACCCCAAGTCAAGGCTCAAATTAGAGCCCTCCACGCCAGCCAAGACCCGCGAGTCCCCCAACACTATCCAATCTCCACCTCCGCCCCCACCCACCGCTTCGACTTCGACCCCTTCCTCCCAACCCCAAAACCCTAACCCTAATCCTCATTCGAGCTCCAAACAGTGCTCTGTCGATTTCGGCTCCGATTCGACCTCTGTCTCGGGAGTAGCGCGGCGGCGGAGTCTCCGTCTCGCTTCGAAGTGTCCAGACTCCGATCAGGGTAAGAATCTCGCCCCGGAAAAAAGTCGCAAGAGGAGTACCGCGGGTCGTGAGAAGGGCAAGTGCTCAATGGCCGAGAAGGAAGTGAAAGAAAAACTTAGGGAAGAAGTTGATGATCATGTTTCGAATGGAGAGGTGGGTTTTGATCTGTTTGGAAAGAGGGTTACGGTTGTGGGAGTTGAGAGAGGGACTGAGGTGATGAAGAAAGGTTTTGGAGAGGAGGGGAAGGTAGAAGTTGATCAGGGCGAGTGGGGTTTCAGTGGATTAGGGCTGAGTTTAGACTTGGGAAGTTTTGGGGCCAATTGTAGTAAAGAAGAGGTGAAGAAAAAAAGGAAGTTGGAGATCGATATTAATTTTCCGGCTTTAGAATGGGAAGGGGAAGATGGAAGAAGTAAAGGGTTTTTGAGTTTGCGGTCAGGGAAGAAAGTCTCGAAGAGAGGACTGGGTGGTGGGCATAATGGAGCATTGGTGATTGATTTAGATGCTGATGAGAATGGCAAGGGAAAGTTGGGGGAGAGTGGTTTTGCATTCAATGGTGTTGATGTGGTGGAATTGGATTCGGACTCGGAAGAGGAGAGGTCTAGTGAGAATTTAGTTCAGAGTAGTAGTCCAAGAGGGAAGAGGAAGTTGAGTGATGCAATTGAAGGTGTTGCTGAAGATCTCAAGGATGAAGTGATGGCCAGTGAGAATGGTATAGATAATGGCAGAAGGAGATACAGCATTGAAGAAAAAGGGAAGGGGAAATTGATTGGAGAAGTGGTCTTAATGAATGGTAATGATGAAGCGGAATTGGGTTTGAAATCAGAAGTTTTGAGCTCAGTGGAGAACGTGGCTGCCAGCCCTATTCGTAAAAGGGAGAATGCAGCATTGCCTGACGAGAGCCAGCTAATCAACAGCAATACAAGAGAGAATGCAGCAAGTGGGAACCAGTACATGGAACGGTTTCGGGATATAGCCAGGCGAAATGCTTCTCGATTTGCTCATTTTGCTTCTGAAGAGGAAGAGGAGAATCAGTTGCCTCCTCAGGTTGAAGTGGCACAGGATATCGAAGATTGGCCTGGTCCCTTTTCTACGGCCATGAAAATTATTAAAGATCGAGCGGCAAAAAATGCCCAACTGCCCTCTAAAGACCAGACCAAACCACCATTCGTTGAATGGGTTCCTAAAAGTTTTCAGGATCGTCCCCTCTCAAAGAATTTGATCCCCTCACTGCAAGATCTGTGTTTGTCCTTTCTTGCTAAGAATGCTGATGCAATTGTTTCACTTGAGCATGTGGCAGATGCTTTGAGACACCGGCTTTGTCAGATGCTCTGTGATTCTCGAAAAATGAACAGTCATTTCTTTGAGCTTCTTGTTCAAGGATTGCCAACAGAGGTTCGCTTAAGGGATTGCTCATGGATGACAGAGGAGCAGTTTACCAAATCCTTTCAGCAGTGGGATACCAGCAATTTAACAGTGCTACAACTTGACCAGTGTGGGCGCTGTGTGGCAGATTATATATTGCATTCTACCTTGGCTCGGTCATCAAATTGCTTGCCTGCACTAACCACTTTATCCCTAAGTGGTGCATGCCGTCTTTCAGATGTTGGGCTTGGTGCACTTGTTTCTTCTGCCCCTGCACTAAGATCTCTAAACCTCAGCCAGTGCTCCCTTCTCACTTCCTCAAGTATCGGCACTTTAGCTGACTCATTAGGATCAGTTCTAAGGGAACTATATCTAAATGATTGCCAAGGAATTGATGCTCTGCTTATTCTTCCAGCATTAAAGAAGCTTGAACATTTGGAGGTTTTGTGGCTAGGAGGCCTTGAAAATGTTTGCGATGATTTTATTAAGGAATTTGTTACTGCTCGTGGTCAGAGTTTGAAGGAGCTTGTTTTGACTGATTGTGGAAAATTAACAGATTCTTCTGTGAAAGTCATAGCTGAAACCTGTACGGGGTTATGTGCACTTGATCTTGTTAACTTGTACAAATTGACAGATTTGACCTTAGGATATCTTGCAAATGGTTGTCGAGAAATTCAAACGTTAAAGCTTTGTAGAAATGCATTCAGTGATGAAGCTATTGCTGCTTTTCTGGAAACTTCTGGAGAGTGTTTAACAGAACTTTCACTCAATAATATCAAGAAGGTTGGGTACAACACAGCCATAGCACTTGCCAAACGTTCAAGGAAGTTGCATACTCTGGATCTATCTTGGTGCCGGAATTTGACTGATGAGGCCCTGGGTTTAATTGCGGACAGCTGCCTATCATTGAGGATACTGAAACTTTTTGGATGCACTCAGTTAACAAATACTTTTCTGGATGGCCACTCAAATCCAGAGGTGAAAATCATTGGCTTGAAAGTTTCTCCAATATTAGAACATGTCAAGGTGTCCGATCCTCACGAAGGTCCATTGCGCTATTCATCCGTCTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

911

Amino Acids

99.45

Weight (kDa)

5.83

Isoelectric Point (pI)

45.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 106
AccB1I GGYRCC 2 cut(s) 46, 2511
AccB7I CCANNNNNTGG 1 cut(s) 1249
AccBSI CCGCTC 1 cut(s) 1415
AccII CGCG 4 cut(s) 21, 105, 268, 359
AclI AACGTT 2 cut(s) 2339, 2476
AclWI GGATC 5 cut(s) 1500, 1510, 2017, 2508, 2687
AcoI YGGCCR 4 cut(s) 387, 993, 1389, 2620
AcsI RAATTY 5 cut(s) 904, 1510, 2150, 2331, 2518
AcuI CTGAAG 2 cut(s) 990, 1329
AcyI GRCGYC 1 cut(s) 47
AfaI GTAC 5 cut(s) 355, 1247, 2248, 2282, 2450
AfiI CCNNNNNNNGG 5 cut(s) 66, 1249, 1833, 2250, 2702
AflII CTTAAG 1 cut(s) 1696
AflIII ACRYGT 1 cut(s) 2677
AjnI CCWGG 3 cut(s) 1271, 1372, 2535
AjuI GAANNNNNNNTTGG 2 cut(s) 1445, 1477
Alw21I GWGCWC 7 cut(s) 212, 224, 383, 1133, 1915, 1964, 2263
Alw26I GTCTC 5 cut(s) 259, 284, 290, 748, 1597
Alw44I GTGCAC 2 cut(s) 1911, 2259
AlwI GGATC 5 cut(s) 1500, 1510, 2017, 2508, 2687
Ama87I CYCGRG 1 cut(s) 256
AoxI GGCC 8 cut(s) 387, 612, 993, 1370, 1389, 2116, 2532, 2620
ApaLI GTGCAC 2 cut(s) 1911, 2259
ApeKI GCWGC 5 cut(s) 1148, 1178, 1229, 2381, 2556
ApoI RAATTY 5 cut(s) 904, 1510, 2150, 2331, 2518
ArsI GACNNNNNNTTYG 2 cut(s) 1596, 1628
AseI ATTAAT 1 cut(s) 666
Asp700I GAANNNNTTC 3 cut(s) 1257, 1282, 1473
AspLEI GCGC 4 cut(s) 49, 268, 1797, 2715
AspS9I GGNCC 5 cut(s) 15, 612, 1376, 2533, 2705
AsuC2I CCSGG 1 cut(s) 332
AsuHPI GGTGA 4 cut(s) 523, 646, 796, 2650
AsuII TTCGAA 2 cut(s) 293, 440
AvaI CYCGRG 1 cut(s) 256
AvaII GGWCC 3 cut(s) 15, 1376, 2705
AxyI CCTNAGG 2 cut(s) 1338, 2302
BaeGI GKGCMC 2 cut(s) 1915, 2263
BalI TGGCCA 2 cut(s) 995, 2622
BanI GGYRCC 2 cut(s) 46, 2511
BanII GRGCYC 3 cut(s) 84, 212, 1133
BarI GAAGNNNNNNTAC 2 cut(s) 2432, 2464
BauI CACGAG 1 cut(s) 2163
Bbv12I GWGCWC 7 cut(s) 212, 224, 383, 1133, 1915, 1964, 2263
BbvCI CCTCAGC 1 cut(s) 1952
BbvI GCAGC 5 cut(s) 1135, 1190, 1241, 2368, 2543
BccI CCATC 3 cut(s) 692, 985, 2612
BceAI ACGGC 3 cut(s) 60, 1404, 1872
BciT130I CCWGG 3 cut(s) 1273, 1374, 2537
BciVI GTATCC 2 cut(s) 1747, 2565
BclI TGATCA 2 cut(s) 430, 553
BcnI CCSGG 1 cut(s) 332
BcoDI GTCTC 5 cut(s) 259, 284, 290, 748, 1597
BfaI CTAG 2 cut(s) 897, 2111
BfoI RGCGCY 2 cut(s) 50, 1798
BfrI CTTAAG 1 cut(s) 1696
BfuI GTATCC 2 cut(s) 1747, 2565
BglII AGATCT 3 cut(s) 973, 1531, 1940
BisI GCNGC 9 cut(s) 50, 269, 272, 1149, 1179, 1230, 1416, 2382, 2557
BlsI GCNGC 9 cut(s) 51, 270, 273, 1150, 1180, 1231, 1417, 2383, 2558
Bme1390I CCNGG 4 cut(s) 332, 1273, 1374, 2537
Bme18I GGWCC 3 cut(s) 15, 1376, 2705
BmeT110I CYCGRG 1 cut(s) 256
BmgT120I GGNCC 5 cut(s) 15, 612, 1376, 2533, 2705
BmiI GGNNCC 8 cut(s) 17, 48, 238, 613, 1241, 1378, 1476, 2513
BmrFI CCNGG 4 cut(s) 332, 1273, 1374, 2537
BmrI ACTGGG 1 cut(s) 767
BmsI GCATC 7 cut(s) 787, 940, 1555, 1585, 1611, 2044, 2579
BmuI ACTGGG 1 cut(s) 767
BoxI GACNNNNGTC 1 cut(s) 251
BpmI CTGGAG 1 cut(s) 2421
Bpu10I CCTNAGC 1 cut(s) 1952
Bpu14I TTCGAA 2 cut(s) 293, 440
BpuEI CTTGAG 3 cut(s) 962, 1601, 1963
BpuMI CCSGG 1 cut(s) 332
Bsa29I ATCGAT 1 cut(s) 660
BsaHI GRCGYC 1 cut(s) 47
BsaJI CCNNGG 6 cut(s) 330, 357, 1827, 2044, 2535, 2536
Bsc4I CCNNNNNNNGG 5 cut(s) 66, 1249, 1833, 2250, 2702
Bse118I RCCGGY 1 cut(s) 1608
Bse1I ACTGG 5 cut(s) 762, 996, 1243, 1786, 1957
Bse21I CCTNAGG 2 cut(s) 1338, 2302
Bse3DI GCAATG 2 cut(s) 1181, 2708
BseBI CCWGG 3 cut(s) 1273, 1374, 2537
BseCI ATCGAT 1 cut(s) 660
BseDI CCNNGG 6 cut(s) 330, 357, 1827, 2044, 2535, 2536
BseGI GGATG 5 cut(s) 988, 1719, 2594, 2623, 2720
BseLI CCNNNNNNNGG 5 cut(s) 66, 1249, 1833, 2250, 2702
BseMI GCAATG 2 cut(s) 1181, 2708
BseMII CTCAG 6 cut(s) 498, 578, 1146, 1352, 1966, 2609
BseNI ACTGG 5 cut(s) 762, 996, 1243, 1786, 1957
BseRI GAGGAG 6 cut(s) 364, 548, 902, 1326, 1334, 1736
BseSI GKGCMC 2 cut(s) 1915, 2263
BseXI GCAGC 5 cut(s) 1135, 1190, 1241, 2368, 2543
BsgI GTGCAG 2 cut(s) 1839, 1917
Bsh1236I CGCG 4 cut(s) 21, 105, 268, 359
BshFI GGCC 8 cut(s) 389, 614, 995, 1372, 1391, 2118, 2534, 2622
BshNI GGYRCC 2 cut(s) 46, 2511
BshVI ATCGAT 1 cut(s) 660
BsiHKAI GWGCWC 7 cut(s) 212, 224, 383, 1133, 1915, 1964, 2263
BsiHKCI CYCGRG 1 cut(s) 256
BsiSI CCGG 4 cut(s) 332, 674, 1609, 2515
BslFI GGGAC 4 cut(s) 94, 517, 1362, 1482
BslI CCNNNNNNNGG 5 cut(s) 66, 1249, 1833, 2250, 2702
BsmAI GTCTC 5 cut(s) 259, 284, 290, 748, 1597
BsmBI CGTCTC 1 cut(s) 290
BsmFI GGGAC 4 cut(s) 94, 517, 1362, 1482
BsmI GAATGC 6 cut(s) 842, 1180, 1231, 1564, 1819, 2360
BsnI GGCC 8 cut(s) 389, 614, 995, 1372, 1391, 2118, 2534, 2622
BsoBI CYCGRG 1 cut(s) 256
Bsp119I TTCGAA 2 cut(s) 293, 440
Bsp1286I GDGCHC 8 cut(s) 84, 212, 224, 383, 1133, 1915, 1964, 2263
Bsp1407I TGTACA 1 cut(s) 2280
BspANI GGCC 8 cut(s) 389, 614, 995, 1372, 1391, 2118, 2534, 2622
BspCNI CTCAG 6 cut(s) 499, 579, 1145, 1351, 1965, 2608
BspDI ATCGAT 1 cut(s) 660
BspFNI CGCG 4 cut(s) 21, 105, 268, 359
BspLI GGNNCC 8 cut(s) 17, 48, 238, 613, 1241, 1378, 1476, 2513
BspPI GGATC 5 cut(s) 1500, 1510, 2017, 2508, 2687
BspT104I TTCGAA 2 cut(s) 293, 440
BspT107I GGYRCC 2 cut(s) 46, 2511
BspTI CTTAAG 1 cut(s) 1696
BsrBI CCGCTC 1 cut(s) 1415
BsrDI GCAATG 2 cut(s) 1181, 2708
BsrFI RCCGGY 1 cut(s) 1608
BsrGI TGTACA 1 cut(s) 2280
BsrI ACTGG 5 cut(s) 762, 996, 1243, 1786, 1957
BssAI RCCGGY 1 cut(s) 1608
BssECI CCNNGG 6 cut(s) 330, 357, 1827, 2044, 2535, 2536
BssNI GRCGYC 1 cut(s) 47
BssSI CACGAG 1 cut(s) 2163
BssT1I CCWWGG 2 cut(s) 1827, 2044
Bst2BI CACGAG 1 cut(s) 2163
Bst2UI CCWGG 3 cut(s) 1273, 1374, 2537
Bst4CI ACNGT 6 cut(s) 7, 219, 484, 1257, 1649, 1771
Bst6I CTCTTC 6 cut(s) 624, 743, 879, 929, 1305, 1311
BstACI GRCGYC 1 cut(s) 47
BstAFI CTTAAG 1 cut(s) 1696
BstAPI GCANNNNNTGC 1 cut(s) 1424
BstAUI TGTACA 1 cut(s) 2280
BstBI TTCGAA 2 cut(s) 293, 440
BstC8I GCNNGC 6 cut(s) 93, 1153, 1199, 1850, 1854, 1885
BstDSI CCRYGG 1 cut(s) 357
BstENI CCTNNNNNAGG 1 cut(s) 2700
BstF5I GGATG 5 cut(s) 988, 1719, 2594, 2623, 2720
BstFNI CGCG 4 cut(s) 21, 105, 268, 359
BstH2I RGCGCY 2 cut(s) 50, 1798
BstHHI GCGC 4 cut(s) 49, 268, 1797, 2715
BstMAI GTCTC 5 cut(s) 259, 284, 290, 748, 1597
BstMWI GCNNNNNNNGC 5 cut(s) 88, 1301, 1424, 1559, 2381
BstNI CCWGG 3 cut(s) 1273, 1374, 2537
BstNSI RCATGY 3 cut(s) 1589, 1887, 2681
BstPAI GACNNNNGTC 1 cut(s) 251
BstSCI CCNGG 4 cut(s) 330, 1271, 1372, 2535
BstSLI GKGCMC 2 cut(s) 1915, 2263
BstUI CGCG 4 cut(s) 21, 105, 268, 359
BstV1I GCAGC 5 cut(s) 1135, 1190, 1241, 2368, 2543
BstX2I RGATCY 4 cut(s) 973, 1531, 1940, 2500
BstYI RGATCY 4 cut(s) 973, 1531, 1940, 2500
Bsu15I ATCGAT 1 cut(s) 660
Bsu36I CCTNAGG 2 cut(s) 1338, 2302
BsuI GTATCC 2 cut(s) 1747, 2565
BsuRI GGCC 8 cut(s) 389, 614, 995, 1372, 1391, 2118, 2534, 2622
BsuTUI ATCGAT 1 cut(s) 660
BtgI CCRYGG 1 cut(s) 357
BtgZI GCGATG 2 cut(s) 13, 2148
BtsCI GGATG 5 cut(s) 988, 1719, 2594, 2623, 2720
BtsI GCAGTG 2 cut(s) 1523, 1754
Cac8I GCNNGC 6 cut(s) 93, 1153, 1199, 1850, 1854, 1885
CfoI GCGC 4 cut(s) 49, 268, 1797, 2715
Cfr10I RCCGGY 1 cut(s) 1608
Cfr13I GGNCC 5 cut(s) 15, 612, 1376, 2533, 2705
Cfr42I CCGCGG 1 cut(s) 360
ClaI ATCGAT 1 cut(s) 660
Csp6I GTAC 5 cut(s) 354, 1246, 2247, 2281, 2449
CviAII CATG 7 cut(s) 434, 1249, 1393, 1586, 1710, 1884, 2678
CviQI GTAC 5 cut(s) 354, 1246, 2247, 2281, 2449
DinI GGCGCC 1 cut(s) 48
DrdI GACNNNNNNGTC 1 cut(s) 106
DseDI GACNNNNNNGTC 1 cut(s) 106
EaeI YGGCCR 4 cut(s) 387, 993, 1389, 2620
Eam1104I CTCTTC 6 cut(s) 624, 743, 879, 929, 1305, 1311
EarI CTCTTC 6 cut(s) 624, 743, 879, 929, 1305, 1311
EciI GGCGGA 2 cut(s) 126, 289
Ecl136II GAGCTC 2 cut(s) 210, 1131
Eco130I CCWWGG 2 cut(s) 1827, 2044
Eco147I AGGCCT 1 cut(s) 2118
Eco24I GRGCYC 3 cut(s) 84, 212, 1133
Eco32I GATATC 2 cut(s) 1360, 2309
Eco47I GGWCC 3 cut(s) 15, 1376, 2705
Eco53kI GAGCTC 2 cut(s) 210, 1131
Eco57I CTGAAG 2 cut(s) 990, 1329
Eco81I CCTNAGG 2 cut(s) 1338, 2302
Eco88I CYCGRG 1 cut(s) 256
EcoICRI GAGCTC 2 cut(s) 210, 1131
EcoNI CCTNNNNNAGG 1 cut(s) 2700
EcoO109I RGGNCCY 2 cut(s) 15, 2533
EcoRII CCWGG 3 cut(s) 1271, 1372, 2535
EcoRV GATATC 2 cut(s) 1360, 2309
EcoT14I CCWWGG 2 cut(s) 1827, 2044
EcoT22I ATGCAT 1 cut(s) 2362
EcoT38I GRGCYC 3 cut(s) 84, 212, 1133
EgeI GGCGCC 1 cut(s) 48
EheI GGCGCC 1 cut(s) 48
ErhI CCWWGG 2 cut(s) 1827, 2044
Esp3I CGTCTC 1 cut(s) 290
FaeI CATG 7 cut(s) 437, 1252, 1396, 1589, 1713, 1887, 2681
FalI AAGNNNNNCTT 2 cut(s) 396, 428
FaqI GGGAC 4 cut(s) 94, 517, 1362, 1482
FatI CATG 7 cut(s) 433, 1248, 1392, 1585, 1709, 1883, 2677
FauI CCCGC 3 cut(s) 26, 110, 352
FbaI TGATCA 2 cut(s) 430, 553
Fnu4HI GCNGC 9 cut(s) 50, 269, 272, 1149, 1179, 1230, 1416, 2382, 2557
FokI GGATG 5 cut(s) 995, 1726, 2601, 2630, 2707
FriOI GRGCYC 3 cut(s) 84, 212, 1133
Fsp4HI GCNGC 9 cut(s) 50, 269, 272, 1149, 1179, 1230, 1416, 2382, 2557
FspBI CTAG 2 cut(s) 897, 2111
GlaI GCGC 4 cut(s) 48, 267, 1796, 2714
GluI GCNGC 9 cut(s) 50, 269, 272, 1149, 1179, 1230, 1416, 2382, 2557
GsuI CTGGAG 1 cut(s) 2421
HaeII RGCGCY 2 cut(s) 50, 1798
HaeIII GGCC 8 cut(s) 389, 614, 995, 1372, 1391, 2118, 2534, 2622
HapII CCGG 4 cut(s) 332, 674, 1609, 2515
HhaI GCGC 4 cut(s) 49, 268, 1797, 2715
Hin1I GRCGYC 1 cut(s) 47
Hin1II CATG 7 cut(s) 437, 1252, 1396, 1589, 1713, 1887, 2681
Hin6I GCGC 4 cut(s) 47, 266, 1795, 2713
HinP1I GCGC 4 cut(s) 47, 266, 1795, 2713
HincII GTYRAC 2 cut(s) 2275, 2601
HindII GTYRAC 2 cut(s) 2275, 2601
HindIII AAGCTT 2 cut(s) 2084, 2345
HpaI GTTAAC 2 cut(s) 2275, 2601
HpaII CCGG 4 cut(s) 332, 674, 1609, 2515
HphI GGTGA 4 cut(s) 523, 646, 796, 2650
Hpy166II GTNNAC 5 cut(s) 1731, 1913, 2261, 2275, 2601
Hpy8I GTNNAC 5 cut(s) 1731, 1913, 2261, 2275, 2601
HpyCH4III ACNGT 6 cut(s) 7, 219, 484, 1257, 1649, 1771
HpyCH4IV ACGT 3 cut(s) 1143, 2339, 2476
HpyF10VI GCNNNNNNNGC 5 cut(s) 88, 1301, 1424, 1559, 2381
HpySE526I ACGT 3 cut(s) 1143, 2339, 2476
Hsp92I GRCGYC 1 cut(s) 47
Hsp92II CATG 7 cut(s) 437, 1252, 1396, 1589, 1713, 1887, 2681
HspAI GCGC 4 cut(s) 47, 266, 1795, 2713
KasI GGCGCC 1 cut(s) 46
Ksp22I TGATCA 2 cut(s) 430, 553
KspAI GTTAAC 2 cut(s) 2275, 2601
KspI CCGCGG 1 cut(s) 360
LmnI GCTCC 6 cut(s) 215, 242, 776, 1723, 1967, 2182
Lsp1109I GCAGC 5 cut(s) 1135, 1190, 1241, 2368, 2543
LweI GCATC 7 cut(s) 787, 940, 1555, 1585, 1611, 2044, 2579
MaeI CTAG 2 cut(s) 897, 2111
MaeII ACGT 3 cut(s) 1143, 2339, 2476
MaeIII GTNAC 2 cut(s) 478, 2155
MbiI CCGCTC 1 cut(s) 1415
MfeI CAATTG 3 cut(s) 616, 954, 1569
MflI RGATCY 4 cut(s) 973, 1531, 1940, 2500
MhlI GDGCHC 8 cut(s) 84, 212, 224, 383, 1133, 1915, 1964, 2263
MlsI TGGCCA 2 cut(s) 995, 2622
MluNI TGGCCA 2 cut(s) 995, 2622
Mly113I GGCGCC 1 cut(s) 47
MlyI GAGTC 5 cut(s) 116, 286, 299, 872, 1994
MmeI TCCRAC 1 cut(s) 633
Mox20I TGGCCA 2 cut(s) 995, 2622
Mph1103I ATGCAT 1 cut(s) 2362
MroXI GAANNNNTTC 3 cut(s) 1257, 1282, 1473
MscI TGGCCA 2 cut(s) 995, 2622
Msp20I TGGCCA 2 cut(s) 995, 2622
MspA1I CMGCKG 2 cut(s) 359, 2556
MspCI CTTAAG 1 cut(s) 1696
MspI CCGG 4 cut(s) 332, 674, 1609, 2515
MspR9I CCNGG 4 cut(s) 332, 1273, 1374, 2537
MunI CAATTG 3 cut(s) 616, 954, 1569
Mva1269I GAATGC 6 cut(s) 842, 1180, 1231, 1564, 1819, 2360
MvaI CCWGG 3 cut(s) 1273, 1374, 2537
MvnI CGCG 4 cut(s) 21, 105, 268, 359
MwoI GCNNNNNNNGC 5 cut(s) 88, 1301, 1424, 1559, 2381
NarI GGCGCC 1 cut(s) 47
NciI CCSGG 1 cut(s) 332
NlaIII CATG 7 cut(s) 437, 1252, 1396, 1589, 1713, 1887, 2681
NlaIV GGNNCC 8 cut(s) 17, 48, 238, 613, 1241, 1378, 1476, 2513
NmeAIII GCCGAG 1 cut(s) 415
NsiI ATGCAT 1 cut(s) 2362
NspI RCATGY 3 cut(s) 1589, 1887, 2681
NspV TTCGAA 2 cut(s) 293, 440
PaeI GCATGC 1 cut(s) 1887
PasI CCCWGGG 1 cut(s) 2536
PceI AGGCCT 1 cut(s) 2118
PciI ACATGT 1 cut(s) 2677
PctI GAATGC 6 cut(s) 842, 1180, 1231, 1564, 1819, 2360
PdmI GAANNNNTTC 3 cut(s) 1257, 1282, 1473
PfeI GAWTC 6 cut(s) 242, 322, 872, 1324, 1631, 2216
PflMI CCANNNNNTGG 1 cut(s) 1249
PkrI GCNGC 9 cut(s) 51, 270, 273, 1150, 1180, 1231, 1417, 2383, 2558
PleI GAGTC 5 cut(s) 115, 285, 299, 872, 1994
PluTI GGCGCC 1 cut(s) 50
PpsI GAGTC 5 cut(s) 115, 285, 299, 872, 1994
PpuMI RGGWCCY 1 cut(s) 15
PscI ACATGT 1 cut(s) 2677
PshAI GACNNNNGTC 1 cut(s) 251
PshBI ATTAAT 1 cut(s) 666
Psp124BI GAGCTC 2 cut(s) 212, 1133
Psp1406I AACGTT 2 cut(s) 2339, 2476
Psp5II RGGWCCY 1 cut(s) 15
Psp6I CCWGG 3 cut(s) 1271, 1372, 2535
PspGI CCWGG 3 cut(s) 1271, 1372, 2535
PspN4I GGNNCC 8 cut(s) 17, 48, 238, 613, 1241, 1378, 1476, 2513
PspPI GGNCC 5 cut(s) 15, 612, 1376, 2533, 2705
PspPPI RGGWCCY 1 cut(s) 15
PsuI RGATCY 4 cut(s) 973, 1531, 1940, 2500
PvuII CAGCTG 1 cut(s) 2556
RsaI GTAC 5 cut(s) 355, 1247, 2248, 2282, 2450
RsaNI GTAC 5 cut(s) 354, 1246, 2247, 2281, 2449
SacI GAGCTC 2 cut(s) 212, 1133
SacII CCGCGG 1 cut(s) 360
SatI GCNGC 9 cut(s) 50, 269, 272, 1149, 1179, 1230, 1416, 2382, 2557
Sau96I GGNCC 5 cut(s) 15, 612, 1376, 2533, 2705
SchI GAGTC 5 cut(s) 116, 286, 299, 872, 1994
ScrFI CCNGG 4 cut(s) 332, 1273, 1374, 2537
SduI GDGCHC 8 cut(s) 84, 212, 224, 383, 1133, 1915, 1964, 2263
SfaNI GCATC 7 cut(s) 787, 940, 1555, 1585, 1611, 2044, 2579
SfoI GGCGCC 1 cut(s) 48
Sfr303I CCGCGG 1 cut(s) 360
SfuI TTCGAA 2 cut(s) 293, 440
SgrBI CCGCGG 1 cut(s) 360
SinI GGWCC 3 cut(s) 15, 1376, 2705
SmlI CTYRAG 4 cut(s) 977, 1580, 1696, 1978
SmoI CTYRAG 4 cut(s) 977, 1580, 1696, 1978
SphI GCATGC 1 cut(s) 1887
SseBI AGGCCT 1 cut(s) 2118
SspDI GGCGCC 1 cut(s) 46
SspI AATATT 1 cut(s) 2670
SspMI CTAG 2 cut(s) 897, 2111
SstI GAGCTC 2 cut(s) 212, 1133
StuI AGGCCT 1 cut(s) 2118
StyD4I CCNGG 4 cut(s) 330, 1271, 1372, 2535
StyI CCWWGG 2 cut(s) 1827, 2044
TaaI ACNGT 6 cut(s) 7, 219, 484, 1257, 1649, 1771
TaiI ACGT 3 cut(s) 1146, 2342, 2479
TaqII GACCGA 1 cut(s) 1824
TatI WGTACW 2 cut(s) 1245, 2280
TauI GCSGC 4 cut(s) 52, 271, 274, 1418
TfiI GAWTC 6 cut(s) 242, 322, 872, 1324, 1631, 2216
TseI GCWGC 5 cut(s) 1148, 1178, 1229, 2381, 2556
TspDTI ATGAA 8 cut(s) 530, 999, 1097, 1110, 1409, 1658, 2385, 2709
TspGWI ACGGA 2 cut(s) 272, 2713
Van91I CCANNNNNTGG 1 cut(s) 1249
Vha464I CTTAAG 1 cut(s) 1696
VneI GTGCAC 2 cut(s) 1911, 2259
VpaK11BI GGWCC 3 cut(s) 15, 1376, 2705
VspI ATTAAT 1 cut(s) 666
XagI CCTNNNNNAGG 1 cut(s) 2700
XapI RAATTY 5 cut(s) 904, 1510, 2150, 2331, 2518
XceI RCATGY 3 cut(s) 1589, 1887, 2681
XcmI CCANNNNNNNNNTGG 1 cut(s) 1467
XmnI GAANNNNTTC 3 cut(s) 1257, 1282, 1473
XspI CTAG 2 cut(s) 897, 2111
Zsp2I ATGCAT 1 cut(s) 2362
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.