Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001594

Physical Location & Seq

Genomic Coordinates Forward (+)

6740695 .. 6743298

Gene Structure 2604 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G19440.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGGCCAAATGGAGACTTGCGACTGCGACGCTCCGTCGACAACTTCAATCCTCATCGCCAACTATCTCTACCTTCAAGAATCCAACCAAAGCATTGTCTGCGGCGGCTCATCAGTCTACTCGCAGCTACAGTACAACTCAGACCGATGATTCGAGAGGGAAATGGTTAACTTTACCTCCTTTTTCTCCCACCATCGATGGCACCGCCGTTGGAAAGGATCTCCTTTCCGACGGAGACTCTGTCAAATCTTCAACGGACAACTCAAAAACGACGGCGCTTAGGTGGATTCTTCGTTGTCGTCCCGATTTACCCAGAACTCTCGTTCAGAAACTCTTCCGCTTAAGACAGGTTAGAAGAGAAATGTCTATGAGTGTTGATGGTGATGAACTACAAAGAAGCCAGCTTAAAAGGGTGGCAGCTAAGGAGTCCTTGAATGTAGGAGATAGAATTTACCTTCCTTTATCGGTTGACAATGATACGCCGCAGACGCCACCTGCTAAGAAAGAAAGCTTTCAATGTAGTGATGAAGAACGCAAATTCGTTTGCAGTTTGGTGTTGTATAAGGATCCAGCCATTATTGTTTTGAATAAACCTCATGGTTTGGCTGTTCAAGGTGGGAGTGGGATCAAAACCAGTATTGATGAACTCGCTGCCTCTTGCTTGAAATTTGATAAATCAGAATCTCCCCGGCTGGTGCACAGACTTGACAGAGACTGTAGTGGACTTTTGGTGTTGGCAAGAACACAGACGGCTGCAACAGTTCTTCATTCCATATTCCGAGAGAAAACAACTGGTGCATCCGCATATGGTGTCAAAAAGAACGTAAAATCCTTGAAAAGAAAATATATGGCACTTGTGATCGGGTGTCCACCACGTCAAAGGGGACAGATTTCAGCGCCACTCAGAAAGGTGGTTGTGGATGATGGAAAATCTGAACGTATCACTGTTAATGACAATGGAGAACTCGTTTCTACTCAGCATGCTATCACCGAATACCGAGTGATTGAATCTTCACCACATGGATACACATGGCTTGAGCTTCGCCCTTTAACCGGGAGAAAACATCAGCTTCGTGTACACTGCGCTGAAGTGCTAGGAACACCGATAGTCGGGGACTACAAATACGGTTGGCAAGCTCATAAAGCCCGGGAACCTTTTGTCTCTTCTGAAAACAACCCAACCAAGCAATCATCATCTCCTTTTGGATTGGATCTGGATGGTGGAGATGTCTCTTCGAAACAGCCACACCTTCATCTCCATTCAAAGCAAATCGATCTGCCAAACATATCACAGCTCTTGGAGAAAATGCAGGTCTCTTCAGACTCTGATATTTCGGATCTCGATAGCCTTAAATTCGATGCTCCATTGCCTAGTCATATGCAACTAAGCTTTAATTTGTTGAAATCTAGAGTCGAAACTTGTGACAAAAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001522 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009982 GO:0009987 GO:0010467 GO:0016070 GO:0016853 GO:0016866 GO:0031119 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PseudoU_synth_2

Protein Analysis

477

Amino Acids

52.96

Weight (kDa)

9.46

Isoelectric Point (pI)

49.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PseudoU_synth_2	PF00849	192 - 337	6.1e-16	RNA pseudouridylate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001594)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19440 AT3G19440
fragaria_vesca	FvH4_2g05120 FvH4_2g05120 FvH4_2g05120 FvH4_2g05120
malus_domestica	MD10G1097600.v1.1
prunus_persica	Prupe.8G135400_v2.0.a1 Prupe.8G135400_v2.0.a1 Prupe.8G135400_v2.0.a1
pyrus_communis	pycom01g14220 pycom10g08370
rosa_chinensis	RchiOBHm_Chr4g0415551 RchiOBHm_Chr6g0255041
rosa_laevigata	RLG00000003460 RLG00000014859 RLG00000014868 RLG00000018864 RLG00000024043 RLG00000027684
rosa_multiflora	Rmu_ssc0000011.1_g000078
rosa_roxburghii	Rroxscaffold_2G00121110 Rroxscaffold_6G00396470 Rroxscaffold_6G00402590 Rroxscaffold_7G00210260
rosa_rugosa	Rorug03G0278700 Rorug03G0278800 Rorug03G0278900 Rorug05G0556400 Rorug05G0556500
rosa_samantha	Rh1AG091300 Rh1AG167900 Rh1DG094800 Rh2BG117700 Rh2BG330200 Rh2DG118600 Rh3BG349000 Rh4CG206700 Rh5BG449900 Rh6AG035800 Rh6AG073700 Rh6BG065900 Rh6BG066100 Rh6BG131700 Rh7AG357100 Rh7CG374500
rosa_wichuraiana	Rw2G034900 Rw6G006400 Rw6G006410 Rw6G026380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	502
Acc36I	ACCTGC	2 cut(s)	502, 1300
AccB1I	GGYRCC	1 cut(s)	200
AccI	GTMKAC	2 cut(s)	37, 116
AciI	CCGC	6 cut(s)	101, 104, 204, 337, 482, 801
AclWI	GGATC	6 cut(s)	225, 560, 573, 632, 1218, 1344
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	4 cut(s)	447, 536, 665, 1352
AcuI	CTGAAG	2 cut(s)	1107, 1302
AcyI	GRCGYC	1 cut(s)	488
AfaI	GTAC	2 cut(s)	133, 1077
AfiI	CCNNNNNNNGG	2 cut(s)	1052, 1109
AflII	CTTAAG	1 cut(s)	340
AhdI	GACNNNNNGTC	1 cut(s)	33
AjiI	CACGTC	1 cut(s)	875
AloI	GAACNNNNNNTCC	2 cut(s)	812, 844
AluBI	AGCT	9 cut(s)	126, 403, 419, 510, 1039, 1069, 1136, 1294, 1389
AluI	AGCT	9 cut(s)	126, 403, 419, 510, 1039, 1069, 1136, 1294, 1389
Alw21I	GWGCWC	1 cut(s)	699
Alw26I	GTCTC	6 cut(s)	7, 228, 705, 1165, 1234, 1318
Alw44I	GTGCAC	1 cut(s)	695
AlwI	GGATC	6 cut(s)	225, 560, 573, 632, 1218, 1344
AlwNI	CAGNNNCTG	2 cut(s)	714, 1325
Ama87I	CYCGRG	1 cut(s)	1146
AoxI	GGCC	1 cut(s)	3
ApaLI	GTGCAC	1 cut(s)	695
ApeKI	GCWGC	4 cut(s)	123, 416, 650, 752
ApoI	RAATTY	4 cut(s)	447, 536, 665, 1352
ArsI	GACNNNNNNTTYG	2 cut(s)	133, 165
Asp700I	GAANNNNTTC	2 cut(s)	332, 510
AspLEI	GCGC	3 cut(s)	277, 898, 1085
AsuC2I	CCSGG	4 cut(s)	688, 1054, 1147, 1148
AsuHPI	GGTGA	3 cut(s)	392, 979, 1005
AsuII	TTCGAA	1 cut(s)	1235
AvaI	CYCGRG	1 cut(s)	1146
BaeGI	GKGCMC	1 cut(s)	699
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	565
BanI	GGYRCC	1 cut(s)	200
Bbv12I	GWGCWC	1 cut(s)	699
BbvI	GCAGC	4 cut(s)	135, 428, 637, 739
BccI	CCATC	5 cut(s)	191, 200, 371, 917, 1211
BceAI	ACGGC	3 cut(s)	191, 288, 765
BciVI	GTATCC	1 cut(s)	1016
BcnI	CCSGG	4 cut(s)	688, 1054, 1147, 1148
BcoDI	GTCTC	6 cut(s)	7, 228, 705, 1165, 1234, 1318
BfaI	CTAG	3 cut(s)	1094, 1371, 1407
BfmI	CTRYAG	2 cut(s)	127, 715
BfoI	RGCGCY	2 cut(s)	278, 899
BfrI	CTTAAG	1 cut(s)	340
BfuAI	ACCTGC	2 cut(s)	502, 1300
BfuI	GTATCC	1 cut(s)	1016
BisI	GCNGC	7 cut(s)	102, 105, 124, 417, 482, 651, 753
BlsI	GCNGC	7 cut(s)	103, 106, 125, 418, 483, 652, 754
Bme1390I	CCNGG	4 cut(s)	688, 1054, 1147, 1148
BmeRI	GACNNNNNGTC	1 cut(s)	33
BmeT110I	CYCGRG	1 cut(s)	1146
BmgBI	CACGTC	1 cut(s)	875
BmiI	GGNNCC	3 cut(s)	202, 567, 1152
BmrFI	CCNGG	4 cut(s)	688, 1054, 1147, 1148
BmsI	GCATC	2 cut(s)	806, 1348
Bpu10I	CCTNAGC	2 cut(s)	278, 420
Bpu14I	TTCGAA	1 cut(s)	1235
BpuEI	CTTGAG	1 cut(s)	1055
BpuMI	CCSGG	4 cut(s)	688, 1054, 1147, 1148
Bsa29I	ATCGAT	2 cut(s)	195, 1272
BsaHI	GRCGYC	1 cut(s)	488
BsaI	GGTCTC	1 cut(s)	1318
BsaJI	CCNNGG	2 cut(s)	686, 1146
BsaXI	ACNNNNNCTCC	6 cut(s)	160, 190, 225, 255, 951, 981
Bsc4I	CCNNNNNNNGG	2 cut(s)	1052, 1109
Bse1I	ACTGG	2 cut(s)	633, 796
Bse3DI	GCAATG	1 cut(s)	1364
BseCI	ATCGAT	2 cut(s)	195, 1272
BseDI	CCNNGG	2 cut(s)	686, 1146
BseGI	GGATG	3 cut(s)	797, 925, 1222
BseLI	CCNNNNNNNGG	2 cut(s)	1052, 1109
BseMI	GCAATG	1 cut(s)	1364
BseMII	CTCAG	3 cut(s)	152, 916, 989
BseNI	ACTGG	2 cut(s)	633, 796
BseSI	GKGCMC	1 cut(s)	699
BseXI	GCAGC	4 cut(s)	135, 428, 637, 739
BshFI	GGCC	1 cut(s)	5
BshNI	GGYRCC	1 cut(s)	200
BshVI	ATCGAT	2 cut(s)	195, 1272
BsiHKAI	GWGCWC	1 cut(s)	699
BsiHKCI	CYCGRG	1 cut(s)	1146
BsiSI	CCGG	3 cut(s)	688, 1053, 1147
BslFI	GGGAC	3 cut(s)	285, 897, 1127
BslI	CCNNNNNNNGG	2 cut(s)	1052, 1109
BsmAI	GTCTC	6 cut(s)	7, 228, 705, 1165, 1234, 1318
BsmFI	GGGAC	3 cut(s)	285, 897, 1127
BsnI	GGCC	1 cut(s)	5
Bso31I	GGTCTC	1 cut(s)	1318
BsoBI	CYCGRG	1 cut(s)	1146
Bsp119I	TTCGAA	1 cut(s)	1235
Bsp1286I	GDGCHC	1 cut(s)	699
Bsp1407I	TGTACA	1 cut(s)	1075
Bsp143I	GATC	7 cut(s)	217, 565, 624, 858, 1210, 1273, 1336
BspACI	CCGC	6 cut(s)	101, 104, 204, 337, 482, 801
BspANI	GGCC	1 cut(s)	5
BspCNI	CTCAG	3 cut(s)	151, 915, 988
BspDI	ATCGAT	2 cut(s)	195, 1272
BspLI	GGNNCC	3 cut(s)	202, 567, 1152
BspMI	ACCTGC	2 cut(s)	502, 1300
BspPI	GGATC	6 cut(s)	225, 560, 573, 632, 1218, 1344
BspT104I	TTCGAA	1 cut(s)	1235
BspT107I	GGYRCC	1 cut(s)	200
BspTI	CTTAAG	1 cut(s)	340
BspTNI	GGTCTC	1 cut(s)	1318
BsrDI	GCAATG	1 cut(s)	1364
BsrGI	TGTACA	1 cut(s)	1075
BsrI	ACTGG	2 cut(s)	633, 796
BssECI	CCNNGG	2 cut(s)	686, 1146
BssMI	GATC	7 cut(s)	217, 565, 624, 858, 1210, 1273, 1336
BssNI	GRCGYC	1 cut(s)	488
Bst4CI	ACNGT	5 cut(s)	131, 716, 760, 946, 1127
Bst6I	CTCTTC	5 cut(s)	338, 349, 1168, 1237, 1321
BstACI	GRCGYC	1 cut(s)	488
BstAFI	CTTAAG	1 cut(s)	340
BstAPI	GCANNNNNTGC	1 cut(s)	98
BstAUI	TGTACA	1 cut(s)	1075
BstBI	TTCGAA	1 cut(s)	1235
BstC8I	GCNNGC	3 cut(s)	401, 981, 1134
BstDEI	CTNAG	7 cut(s)	138, 278, 420, 498, 902, 975, 1385
BstF5I	GGATG	3 cut(s)	797, 925, 1222
BstH2I	RGCGCY	2 cut(s)	278, 899
BstHHI	GCGC	3 cut(s)	277, 898, 1085
BstKTI	GATC	7 cut(s)	220, 568, 627, 861, 1213, 1276, 1339
BstMAI	GTCTC	6 cut(s)	7, 228, 705, 1165, 1234, 1318
BstMBI	GATC	7 cut(s)	217, 565, 624, 858, 1210, 1273, 1336
BstMWI	GCNNNNNNNGC	3 cut(s)	98, 487, 1142
BstNSI	RCATGY	1 cut(s)	983
BstSCI	CCNGG	4 cut(s)	686, 1052, 1145, 1146
BstSFI	CTRYAG	2 cut(s)	127, 715
BstSLI	GKGCMC	1 cut(s)	699
BstV1I	GCAGC	4 cut(s)	135, 428, 637, 739
BstX2I	RGATCY	4 cut(s)	217, 565, 1210, 1336
BstYI	RGATCY	4 cut(s)	217, 565, 1210, 1336
Bsu15I	ATCGAT	2 cut(s)	195, 1272
BsuI	GTATCC	1 cut(s)	1016
BsuRI	GGCC	1 cut(s)	5
BsuTUI	ATCGAT	2 cut(s)	195, 1272
BtgZI	GCGATG	1 cut(s)	39
BtrI	CACGTC	1 cut(s)	875
BtsCI	GGATG	3 cut(s)	797, 925, 1222
BtsI	GCAGTG	1 cut(s)	1078
BtsIMutI	CAGTG	2 cut(s)	942, 1078
BveI	ACCTGC	2 cut(s)	502, 1300
Cac8I	GCNNGC	3 cut(s)	401, 981, 1134
CaiI	CAGNNNCTG	2 cut(s)	714, 1325
CfoI	GCGC	3 cut(s)	277, 898, 1085
Cfr9I	CCCGGG	1 cut(s)	1146
ClaI	ATCGAT	2 cut(s)	195, 1272
CseI	GACGC	2 cut(s)	37, 496
Csp6I	GTAC	2 cut(s)	132, 1076
CviAII	CATG	4 cut(s)	596, 980, 1019, 1029
CviQI	GTAC	2 cut(s)	132, 1076
DdeI	CTNAG	7 cut(s)	138, 278, 420, 498, 902, 975, 1385
DpnI	GATC	7 cut(s)	219, 567, 626, 860, 1212, 1275, 1338
DpnII	GATC	7 cut(s)	217, 565, 624, 858, 1210, 1273, 1336
DriI	GACNNNNNGTC	1 cut(s)	33
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	5 cut(s)	338, 349, 1168, 1237, 1321
Eam1105I	GACNNNNNGTC	1 cut(s)	33
EarI	CTCTTC	5 cut(s)	338, 349, 1168, 1237, 1321
Eco31I	GGTCTC	1 cut(s)	1318
Eco57I	CTGAAG	2 cut(s)	1107, 1302
Eco88I	CYCGRG	1 cut(s)	1146
FaeI	CATG	4 cut(s)	599, 983, 1022, 1032
FalI	AAGNNNNNCTT	2 cut(s)	413, 445
FaqI	GGGAC	3 cut(s)	285, 897, 1127
FatI	CATG	4 cut(s)	595, 979, 1018, 1028
FauNDI	CATATG	2 cut(s)	805, 1377
FblI	GTMKAC	2 cut(s)	37, 116
Fnu4HI	GCNGC	7 cut(s)	102, 105, 124, 417, 482, 651, 753
FokI	GGATG	3 cut(s)	784, 932, 1229
Fsp4HI	GCNGC	7 cut(s)	102, 105, 124, 417, 482, 651, 753
FspBI	CTAG	3 cut(s)	1094, 1371, 1407
GlaI	GCGC	3 cut(s)	276, 897, 1084
GluI	GCNGC	7 cut(s)	102, 105, 124, 417, 482, 651, 753
HaeII	RGCGCY	2 cut(s)	278, 899
HaeIII	GGCC	1 cut(s)	5
HapII	CCGG	3 cut(s)	688, 1053, 1147
HgaI	GACGC	2 cut(s)	37, 496
HhaI	GCGC	3 cut(s)	277, 898, 1085
Hin1I	GRCGYC	1 cut(s)	488
Hin1II	CATG	4 cut(s)	599, 983, 1022, 1032
Hin6I	GCGC	3 cut(s)	275, 896, 1083
HinP1I	GCGC	3 cut(s)	275, 896, 1083
HincII	GTYRAC	3 cut(s)	38, 168, 469
HindII	GTYRAC	3 cut(s)	38, 168, 469
HindIII	AAGCTT	2 cut(s)	508, 1387
HinfI	GANTC	9 cut(s)	79, 149, 236, 286, 425, 680, 1007, 1322, 1410
HpaI	GTTAAC	1 cut(s)	168
HpaII	CCGG	3 cut(s)	688, 1053, 1147
HphI	GGTGA	3 cut(s)	392, 979, 1005
Hpy166II	GTNNAC	9 cut(s)	38, 117, 168, 469, 697, 722, 869, 1076, 1078
Hpy188III	TCNNGA	6 cut(s)	76, 153, 302, 1214, 1340, 1407
Hpy8I	GTNNAC	9 cut(s)	38, 117, 168, 469, 697, 722, 869, 1076, 1078
Hpy99I	CGWCG	4 cut(s)	31, 39, 233, 274
HpyAV	CCTTC	3 cut(s)	82, 464, 1259
HpyCH4III	ACNGT	5 cut(s)	131, 716, 760, 946, 1127
HpyCH4IV	ACGT	3 cut(s)	822, 874, 937
HpyCH4V	TGCA	6 cut(s)	546, 697, 755, 797, 1309, 1381
HpyF10VI	GCNNNNNNNGC	3 cut(s)	98, 487, 1142
HpyF3I	CTNAG	7 cut(s)	138, 278, 420, 498, 902, 975, 1385
HpySE526I	ACGT	3 cut(s)	822, 874, 937
Hsp92I	GRCGYC	1 cut(s)	488
Hsp92II	CATG	4 cut(s)	599, 983, 1022, 1032
HspAI	GCGC	3 cut(s)	275, 896, 1083
KspAI	GTTAAC	1 cut(s)	168
Kzo9I	GATC	7 cut(s)	217, 565, 624, 858, 1210, 1273, 1336
LmnI	GCTCC	2 cut(s)	36, 1366
Lsp1109I	GCAGC	4 cut(s)	135, 428, 637, 739
LweI	GCATC	2 cut(s)	806, 1348
MaeI	CTAG	3 cut(s)	1094, 1371, 1407
MaeII	ACGT	3 cut(s)	822, 874, 937
MaeIII	GTNAC	1 cut(s)	1421
MalI	GATC	7 cut(s)	219, 567, 626, 860, 1212, 1275, 1338
MboI	GATC	7 cut(s)	217, 565, 624, 858, 1210, 1273, 1336
MflI	RGATCY	4 cut(s)	217, 565, 1210, 1336
MhlI	GDGCHC	1 cut(s)	699
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	6 cut(s)	447, 536, 665, 1352, 1393, 1429
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	4 cut(s)	230, 434, 1316, 1419
MmeI	TCCRAC	3 cut(s)	107, 190, 252
MnlI	CCTC	5 cut(s)	61, 149, 186, 603, 664
Mox20I	TGGCCA	1 cut(s)	5
MroXI	GAANNNNTTC	2 cut(s)	332, 510
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	7 cut(s)	167, 341, 405, 948, 1049, 1350, 1392
Msp20I	TGGCCA	1 cut(s)	5
MspCI	CTTAAG	1 cut(s)	340
MspI	CCGG	3 cut(s)	688, 1053, 1147
MspR9I	CCNGG	4 cut(s)	688, 1054, 1147, 1148
MwoI	GCNNNNNNNGC	3 cut(s)	98, 487, 1142
NciI	CCSGG	4 cut(s)	688, 1054, 1147, 1148
NdeI	CATATG	2 cut(s)	805, 1377
NdeII	GATC	7 cut(s)	217, 565, 624, 858, 1210, 1273, 1336
NlaIII	CATG	4 cut(s)	599, 983, 1022, 1032
NlaIV	GGNNCC	3 cut(s)	202, 567, 1152
NmuCI	GTSAC	1 cut(s)	1421
NspI	RCATGY	1 cut(s)	983
NspV	TTCGAA	1 cut(s)	1235
PaeI	GCATGC	1 cut(s)	983
PaqCI	CACCTGC	1 cut(s)	502
PdmI	GAANNNNTTC	2 cut(s)	332, 510
PfeI	GAWTC	5 cut(s)	79, 149, 286, 680, 1007
PflFI	GACNNNGTC	1 cut(s)	239
PkrI	GCNGC	7 cut(s)	103, 106, 125, 418, 483, 652, 754
PleI	GAGTC	4 cut(s)	230, 433, 1316, 1418
PpsI	GAGTC	4 cut(s)	230, 433, 1316, 1418
PspN4I	GGNNCC	3 cut(s)	202, 567, 1152
PstNI	CAGNNNCTG	2 cut(s)	714, 1325
PsuI	RGATCY	4 cut(s)	217, 565, 1210, 1336
PsyI	GACNNNGTC	1 cut(s)	239
RsaI	GTAC	2 cut(s)	133, 1077
RsaNI	GTAC	2 cut(s)	132, 1076
SalI	GTCGAC	1 cut(s)	36
SaqAI	TTAA	7 cut(s)	167, 341, 405, 948, 1049, 1350, 1392
SatI	GCNGC	7 cut(s)	102, 105, 124, 417, 482, 651, 753
Sau3AI	GATC	7 cut(s)	217, 565, 624, 858, 1210, 1273, 1336
SchI	GAGTC	4 cut(s)	230, 434, 1316, 1419
ScrFI	CCNGG	4 cut(s)	688, 1054, 1147, 1148
SduI	GDGCHC	1 cut(s)	699
SfaNI	GCATC	2 cut(s)	806, 1348
SfcI	CTRYAG	2 cut(s)	127, 715
SfuI	TTCGAA	1 cut(s)	1235
SmaI	CCCGGG	1 cut(s)	1148
SmlI	CTYRAG	2 cut(s)	340, 1034
SmoI	CTYRAG	2 cut(s)	340, 1034
SphI	GCATGC	1 cut(s)	983
Sse9I	AATT	6 cut(s)	447, 536, 665, 1352, 1393, 1429
SsiI	CCGC	6 cut(s)	101, 104, 204, 337, 482, 801
SspMI	CTAG	3 cut(s)	1094, 1371, 1407
StyD4I	CCNGG	4 cut(s)	686, 1052, 1145, 1146
TaaI	ACNGT	5 cut(s)	131, 716, 760, 946, 1127
TaiI	ACGT	3 cut(s)	825, 877, 940
TaqI	TCGA	8 cut(s)	37, 152, 195, 1235, 1272, 1341, 1356, 1413
TaqII	GACCGA	1 cut(s)	158
TasI	AATT	6 cut(s)	447, 536, 665, 1352, 1393, 1429
TatI	WGTACW	2 cut(s)	131, 1075
TauI	GCSGC	3 cut(s)	104, 107, 484
TfiI	GAWTC	5 cut(s)	79, 149, 286, 680, 1007
Tru1I	TTAA	7 cut(s)	167, 341, 405, 948, 1049, 1350, 1392
Tru9I	TTAA	7 cut(s)	167, 341, 405, 948, 1049, 1350, 1392
TscAI	CASTG	2 cut(s)	949, 1085
TseFI	GTSAC	1 cut(s)	1421
TseI	GCWGC	4 cut(s)	123, 416, 650, 752
Tsp45I	GTSAC	1 cut(s)	1421
TspDTI	ATGAA	5 cut(s)	399, 540, 657, 755, 1241
TspGWI	ACGGA	3 cut(s)	23, 246, 269
TspMI	CCCGGG	1 cut(s)	1146
TspRI	CASTG	2 cut(s)	949, 1085
Tth111I	GACNNNGTC	1 cut(s)	239
Vha464I	CTTAAG	1 cut(s)	340
VneI	GTGCAC	1 cut(s)	695
XapI	RAATTY	4 cut(s)	447, 536, 665, 1352
XbaI	TCTAGA	1 cut(s)	1406
XceI	RCATGY	1 cut(s)	983
XmaI	CCCGGG	1 cut(s)	1146
XmiI	GTMKAC	2 cut(s)	37, 116
XmnI	GAANNNNTTC	2 cut(s)	332, 510
XspI	CTAG	3 cut(s)	1094, 1371, 1407

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.