SNF2 domain-containing protein CLASSY
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G19440 AT3G19440 |
| fragaria_vesca | FvH4_2g05120 FvH4_2g05120 FvH4_2g05120 FvH4_2g05120 |
| malus_domestica | MD10G1097600.v1.1 |
| prunus_persica | Prupe.8G135400_v2.0.a1 Prupe.8G135400_v2.0.a1 Prupe.8G135400_v2.0.a1 |
| pyrus_communis | pycom01g14220 pycom10g08370 |
| rosa_chinensis | RchiOBHm_Chr4g0415551 RchiOBHm_Chr6g0255041 |
| rosa_laevigata | RLG00000003460 RLG00000014859 RLG00000014868 RLG00000018864 RLG00000024043 RLG00000027684 |
| rosa_multiflora | Rmu_ssc0000011.1_g000078 |
| rosa_roxburghii | Rroxscaffold_2G00121110 Rroxscaffold_6G00396470 Rroxscaffold_6G00402590 Rroxscaffold_7G00210260 |
| rosa_rugosa | Rorug03G0278700 Rorug03G0278800 Rorug03G0278900 Rorug05G0556400 Rorug05G0556500 |
| rosa_samantha | Rh1AG091300 Rh1AG167900 Rh1DG094800 Rh2BG117700 Rh2BG330200 Rh2DG118600 Rh3BG349000 Rh4CG206700 Rh5BG449900 Rh6AG035800 Rh6AG073700 Rh6BG065900 Rh6BG066100 Rh6BG131700 Rh7AG357100 Rh7CG374500 |
| rosa_wichuraiana | Rw2G034900 Rw6G006400 Rw6G006410 Rw6G026380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 1 cut(s) | 255 |
| AcuI | CTGAAG | 1 cut(s) | 156 |
| AcyI | GRCGYC | 1 cut(s) | 39 |
| AgsI | TTSAA | 1 cut(s) | 195 |
| AleI | CACNNNNGTG | 1 cut(s) | 234 |
| AluBI | AGCT | 2 cut(s) | 307, 390 |
| AluI | AGCT | 2 cut(s) | 307, 390 |
| Alw26I | GTCTC | 1 cut(s) | 343 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApoI | RAATTY | 1 cut(s) | 255 |
| AspS9I | GGNCC | 2 cut(s) | 11, 331 |
| AvaII | GGWCC | 2 cut(s) | 11, 331 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BccI | CCATC | 2 cut(s) | 140, 160 |
| BcoDI | GTCTC | 1 cut(s) | 343 |
| BfmI | CTRYAG | 1 cut(s) | 342 |
| Bme18I | GGWCC | 2 cut(s) | 11, 331 |
| BmgT120I | GGNCC | 2 cut(s) | 11, 331 |
| BmiI | GGNNCC | 1 cut(s) | 13 |
| BmsI | GCATC | 2 cut(s) | 148, 333 |
| BsaHI | GRCGYC | 1 cut(s) | 39 |
| BseGI | GGATG | 2 cut(s) | 171, 205 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsmAI | GTCTC | 1 cut(s) | 343 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 1 cut(s) | 211 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspLI | GGNNCC | 1 cut(s) | 13 |
| BssMI | GATC | 1 cut(s) | 211 |
| BssNI | GRCGYC | 1 cut(s) | 39 |
| Bst6I | CTCTTC | 1 cut(s) | 114 |
| BstACI | GRCGYC | 1 cut(s) | 39 |
| BstF5I | GGATG | 2 cut(s) | 171, 205 |
| BstKTI | GATC | 1 cut(s) | 214 |
| BstMAI | GTCTC | 1 cut(s) | 343 |
| BstMBI | GATC | 1 cut(s) | 211 |
| BstSFI | CTRYAG | 1 cut(s) | 342 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 236 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 2 cut(s) | 171, 205 |
| BtsIMutI | CAGTG | 1 cut(s) | 132 |
| Cfr13I | GGNCC | 2 cut(s) | 11, 331 |
| CseI | GACGC | 1 cut(s) | 28 |
| CviAII | CATG | 1 cut(s) | 162 |
| CviJI | RGCY | 4 cut(s) | 5, 90, 307, 390 |
| CviKI_1 | RGCY | 4 cut(s) | 5, 90, 307, 390 |
| DpnI | GATC | 1 cut(s) | 213 |
| DpnII | GATC | 1 cut(s) | 211 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 1 cut(s) | 114 |
| EarI | CTCTTC | 1 cut(s) | 114 |
| Eco47I | GGWCC | 2 cut(s) | 11, 331 |
| Eco57I | CTGAAG | 1 cut(s) | 156 |
| EcoO109I | RGGNCCY | 1 cut(s) | 331 |
| EcoT22I | ATGCAT | 1 cut(s) | 163 |
| FaeI | CATG | 1 cut(s) | 165 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 284, 316 |
| FatI | CATG | 1 cut(s) | 161 |
| FokI | GGATG | 2 cut(s) | 178, 212 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HgaI | GACGC | 1 cut(s) | 28 |
| Hin1I | GRCGYC | 1 cut(s) | 39 |
| Hin1II | CATG | 1 cut(s) | 165 |
| HinfI | GANTC | 2 cut(s) | 58, 188 |
| Hpy99I | CGWCG | 1 cut(s) | 44 |
| HpyCH4V | TGCA | 3 cut(s) | 29, 96, 161 |
| Hsp92I | GRCGYC | 1 cut(s) | 39 |
| Hsp92II | CATG | 1 cut(s) | 165 |
| Kzo9I | GATC | 1 cut(s) | 211 |
| LpnPI | CCDG | 1 cut(s) | 62 |
| LweI | GCATC | 2 cut(s) | 148, 333 |
| MaeIII | GTNAC | 1 cut(s) | 68 |
| MalI | GATC | 1 cut(s) | 213 |
| MboI | GATC | 1 cut(s) | 211 |
| MboII | GAAGA | 3 cut(s) | 131, 149, 183 |
| MfeI | CAATTG | 1 cut(s) | 30 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 2 cut(s) | 30, 255 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MnlI | CCTC | 4 cut(s) | 115, 245, 310, 362 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| Mph1103I | ATGCAT | 1 cut(s) | 163 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MslI | CAYNNNNRTG | 2 cut(s) | 51, 234 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MunI | CAATTG | 1 cut(s) | 30 |
| NdeII | GATC | 1 cut(s) | 211 |
| NlaIII | CATG | 1 cut(s) | 165 |
| NlaIV | GGNNCC | 1 cut(s) | 13 |
| NmuCI | GTSAC | 1 cut(s) | 68 |
| NsiI | ATGCAT | 1 cut(s) | 163 |
| OliI | CACNNNNGTG | 1 cut(s) | 234 |
| PfeI | GAWTC | 2 cut(s) | 58, 188 |
| PpuMI | RGGWCCY | 1 cut(s) | 331 |
| Psp5II | RGGWCCY | 1 cut(s) | 331 |
| PspN4I | GGNNCC | 1 cut(s) | 13 |
| PspPI | GGNCC | 2 cut(s) | 11, 331 |
| PspPPI | RGGWCCY | 1 cut(s) | 331 |
| RseI | CAYNNNNRTG | 2 cut(s) | 51, 234 |
| Sau3AI | GATC | 1 cut(s) | 211 |
| Sau96I | GGNCC | 2 cut(s) | 11, 331 |
| SetI | ASST | 5 cut(s) | 103, 309, 336, 373, 392 |
| SfaNI | GCATC | 2 cut(s) | 148, 333 |
| SfcI | CTRYAG | 1 cut(s) | 342 |
| SgeI | CNNG | 7 cut(s) | 74, 89, 95, 174, 227, 298, 340 |
| SinI | GGWCC | 2 cut(s) | 11, 331 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 51, 234 |
| Sse9I | AATT | 2 cut(s) | 30, 255 |
| TasI | AATT | 2 cut(s) | 30, 255 |
| TfiI | GAWTC | 2 cut(s) | 58, 188 |
| TscAI | CASTG | 1 cut(s) | 139 |
| TseFI | GTSAC | 1 cut(s) | 68 |
| Tsp45I | GTSAC | 1 cut(s) | 68 |
| TspGWI | ACGGA | 1 cut(s) | 141 |
| TspRI | CASTG | 1 cut(s) | 139 |
| VpaK11BI | GGWCC | 2 cut(s) | 11, 331 |
| XapI | RAATTY | 1 cut(s) | 255 |
| Zsp2I | ATGCAT | 1 cut(s) | 163 |