Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001594

Physical Location & Seq

Genomic Coordinates Reverse (-)

27656842 .. 27658817

Gene Structure 1976 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0278800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGGAAATGGCGGCTCGGCGCGTGAGGGCTTTCAAGCGCTGGATGAAGCGGGAAGGCATCCAATGCAGCGACGCTCTCGACTTGACCGTCTCCGCCACCCAAGGCCTCTCCGTCACTGCCCTCGCCGACCTCCACGTCGGCGACGCCGTCGCCAGAATCCCCAAGGCCACGTGCCTCACCGTCATCACCACCGCCGCACGCGACATGATCGACGCCGCCGGCCTCGACGGCAGCCTGGGCCTGGCGGTGGCGATCATGCACGAGAGGAGCCTGGGGGAGCAGTCCCACTGGGCCCCGTACCTGGCGGTGTTGCCGGAGCAAGAGCCCATTCCGTTGGTCTGGACGGCGGAGGAGCTGCTGAGAGGGACGGAGCTGCACGACACGGTGAAGGAGGACAGAGGAGTGATGTTGGAGGACTGGAAAGAGAGCATTGAGCCATTGCAGGATCAAATTGGGTCGACCCAATTTGAGAGCTTTTTCGGGTTTGAGGAGTACCTGGCAGCAAGAACGCTGGTTGCTTCTAGGTCTTTTCAGATTGATGATCACTACCACGGAGTCGGAATGGTTCCTCTGGCTGACATCTTTAATCACAAAACGGCAGCTGAGGATGTGCACTTGAACACCTCTGCATCTACTGAAAACAGTGAATCCGACACTACTGAAAATAGTGGTAGCGAAGAAGGCAATGAGTCTGCTAATGAATCTACTACTAGTACAACTTCCAGTGTTGGTGCTAGTACTAATGATGATGTAGCTTCTAGTGCTACTGATGATGATGGGGATGACGATGATTTGGAGATGGTTATGGTCAAAGATGTCAAAGTTGGAGCTGAGGTCTTCAATACATATGGCTTATTGGGAAATGCTGCACTTCTACATAGATATGGATTTACAGAGCCTGATAATCCATTTGACATTGTGAATATCGACTTGGAACTTGTACTTCAGTGGAGTGCATCTTTGTTTTCTGGCCAGCATCGTAGAGCGAGGCTATCTTTGTGGAGAAGATTAGGATACTCCGGATGTGCCAGCCACAACTCGGAATATTTTGAGATTTCGTTTAATGGGGAACCCCCAAATGAGCTGCTGCTTTTGTTGTACATAATGTTGTTACAACAGGATGCATATGATAAGATTGATCTGGCTCTAGCAACCACAGGAAATTCCAATGGGCATATGGACGGCATTTTATCAGATAAAACTGAAAAATTGTCTGACATAACTGCTGAGTTCAGTGAAGCCGTGTTGTTGACAAATACTATTTGTAATGCTCTCTTGTCCCTTGCAGATATGCGGGAGAGCTTGTATGGTAAAAATTCAATACAAGACGACATTGAAGCACTGAAGAGGTGTTGTAGTATAAAAGAGAAAAAGTTGTACCATTCGTTGATGCTTCGTATCAGTGAGAGGAGAATCATTCAGAAATTCAGAACATTTGCCACTTCCGGTTCCCAAGTTACAACTGGTGAACAAGCCTCTCCGAGAAAGAAGTTGAAACGAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001522 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009982 GO:0009987 GO:0010467 GO:0016070 GO:0016853 GO:0016866 GO:0031119 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PseudoU_synth_2

Protein Analysis

501

Amino Acids

55.28

Weight (kDa)

4.78

Isoelectric Point (pI)

39.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001594)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19440 AT3G19440
fragaria_vesca	FvH4_2g05120 FvH4_2g05120 FvH4_2g05120 FvH4_2g05120
malus_domestica	MD10G1097600.v1.1
prunus_persica	Prupe.8G135400_v2.0.a1 Prupe.8G135400_v2.0.a1 Prupe.8G135400_v2.0.a1
pyrus_communis	pycom01g14220 pycom10g08370
rosa_chinensis	RchiOBHm_Chr4g0415551 RchiOBHm_Chr6g0255041
rosa_laevigata	RLG00000003460 RLG00000014859 RLG00000014868 RLG00000018864 RLG00000024043 RLG00000027684
rosa_multiflora	Rmu_ssc0000011.1_g000078
rosa_roxburghii	Rroxscaffold_2G00121110 Rroxscaffold_6G00396470 Rroxscaffold_6G00402590 Rroxscaffold_7G00210260
rosa_rugosa	Rorug03G0278700 Rorug03G0278800 Rorug03G0278900 Rorug05G0556400 Rorug05G0556500
rosa_samantha	Rh1AG091300 Rh1AG167900 Rh1DG094800 Rh2BG117700 Rh2BG330200 Rh2DG118600 Rh3BG349000 Rh4CG206700 Rh5BG449900 Rh6AG035800 Rh6AG073700 Rh6BG065900 Rh6BG066100 Rh6BG131700 Rh7AG357100 Rh7CG374500
rosa_wichuraiana	Rw2G034900 Rw6G006400 Rw6G006410 Rw6G026380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	86, 134
AccI	GTMKAC	1 cut(s)	458
AccII	CGCG	2 cut(s)	21, 201
AccIII	TCCGGA	1 cut(s)	1019
AclWI	GGATC	1 cut(s)	453
AcoI	YGGCCR	1 cut(s)	970
AcsI	RAATTY	3 cut(s)	1162, 1315, 1424
AcuI	CTGAAG	2 cut(s)	929, 1364
AcvI	CACGTG	1 cut(s)	171
AcyI	GRCGYC	2 cut(s)	144, 213
AfaI	GTAC	7 cut(s)	299, 494, 715, 739, 942, 1100, 1379
AfeI	AGCGCT	1 cut(s)	38
AfiI	CCNNNNNNNGG	4 cut(s)	241, 247, 301, 1039
AgsI	TTSAA	6 cut(s)	34, 619, 841, 1320, 1337, 1495
AhlI	ACTAGT	1 cut(s)	710
AjiI	CACGTC	1 cut(s)	136
AjnI	CCWGG	5 cut(s)	234, 240, 270, 300, 495
AjuI	GAANNNNNNNTTGG	2 cut(s)	914, 946
AluBI	AGCT	8 cut(s)	355, 373, 474, 602, 755, 830, 1084, 1302
AluI	AGCT	8 cut(s)	355, 373, 474, 602, 755, 830, 1084, 1302
Alw21I	GWGCWC	1 cut(s)	615
Alw26I	GTCTC	1 cut(s)	94
Alw44I	GTGCAC	1 cut(s)	611
AlwI	GGATC	1 cut(s)	453
AlwNI	CAGNNNCTG	1 cut(s)	899
Aor13HI	TCCGGA	1 cut(s)	1019
Aor51HI	AGCGCT	1 cut(s)	38
AoxI	GGCC	6 cut(s)	103, 165, 220, 238, 291, 970
ApaI	GGGCCC	1 cut(s)	295
ApaLI	GTGCAC	1 cut(s)	611
ApeKI	GCWGC	9 cut(s)	66, 231, 355, 373, 500, 599, 866, 1084, 1087
ApoI	RAATTY	3 cut(s)	1162, 1315, 1424
AspLEI	GCGC	2 cut(s)	21, 39
AspS9I	GGNCC	3 cut(s)	238, 291, 292
AsuHPI	GGTGA	4 cut(s)	169, 178, 397, 1478
BaeGI	GKGCMC	2 cut(s)	295, 615
BalI	TGGCCA	1 cut(s)	972
BanII	GRGCYC	2 cut(s)	295, 327
BauI	CACGAG	1 cut(s)	260
BbrPI	CACGTG	1 cut(s)	171
BbsI	GAAGAC	1 cut(s)	829
Bbv12I	GWGCWC	1 cut(s)	615
BbvCI	CCTCAGC	2 cut(s)	603, 831
BbvI	GCAGC	9 cut(s)	78, 243, 342, 360, 512, 611, 853, 1071, 1074
BccI	CCATC	2 cut(s)	770, 793
BceAI	ACGGC	6 cut(s)	131, 244, 360, 612, 1198, 1226
BciT130I	CCWGG	5 cut(s)	236, 242, 272, 302, 497
BciVI	GTATCC	1 cut(s)	1007
BclI	TGATCA	1 cut(s)	541
BcoDI	GTCTC	1 cut(s)	94
BcuI	ACTAGT	1 cut(s)	710
BfaI	CTAG	5 cut(s)	522, 711, 735, 759, 1148
BfoI	RGCGCY	1 cut(s)	40
BfuI	GTATCC	1 cut(s)	1007
BglI	GCCNNNNNGGC	1 cut(s)	228
BmcAI	AGTACT	1 cut(s)	739
Bme1390I	CCNGG	5 cut(s)	236, 242, 272, 302, 497
BmgBI	CACGTC	1 cut(s)	136
BmgT120I	GGNCC	3 cut(s)	238, 291, 292
BmiI	GGNNCC	6 cut(s)	269, 293, 294, 567, 1071, 1450
BmrFI	CCNGG	5 cut(s)	236, 242, 272, 302, 497
BmrI	ACTGGG	1 cut(s)	298
BmsI	GCATC	6 cut(s)	66, 638, 965, 985, 1111, 1380
BmuI	ACTGGG	1 cut(s)	298
BpiI	GAAGAC	1 cut(s)	829
Bpu10I	CCTNAGC	2 cut(s)	603, 831
BsaAI	YACGTR	1 cut(s)	171
BsaHI	GRCGYC	2 cut(s)	144, 213
BsaJI	CCNNGG	5 cut(s)	100, 162, 235, 271, 550
BsaWI	WCCGGW	2 cut(s)	1019, 1445
BsaXI	ACNNNNNCTCC	4 cut(s)	819, 849, 1289, 1319
Bsc4I	CCNNNNNNNGG	4 cut(s)	241, 247, 301, 1039
Bse118I	RCCGGY	1 cut(s)	218
Bse1I	ACTGG	4 cut(s)	293, 422, 723, 1468
Bse3DI	GCAATG	2 cut(s)	437, 691
BseAI	TCCGGA	1 cut(s)	1019
BseBI	CCWGG	5 cut(s)	236, 242, 272, 302, 497
BseDI	CCNNGG	5 cut(s)	100, 162, 235, 271, 550
BseGI	GGATG	6 cut(s)	48, 57, 613, 787, 1028, 1126
BseLI	CCNNNNNNNGG	4 cut(s)	241, 247, 301, 1039
BseMI	GCAATG	2 cut(s)	437, 691
BseMII	CTCAG	4 cut(s)	350, 594, 822, 1218
BseNI	ACTGG	4 cut(s)	293, 422, 723, 1468
BseRI	GAGGAG	5 cut(s)	280, 365, 414, 503, 1423
BseSI	GKGCMC	2 cut(s)	295, 615
BseXI	GCAGC	9 cut(s)	78, 243, 342, 360, 512, 611, 853, 1071, 1074
BsgI	GTGCAG	2 cut(s)	359, 852
Bsh1236I	CGCG	2 cut(s)	21, 201
BshFI	GGCC	6 cut(s)	105, 167, 222, 240, 293, 972
BsiHKAI	GWGCWC	1 cut(s)	615
BsiSI	CCGG	4 cut(s)	219, 314, 1020, 1446
BslFI	GGGAC	3 cut(s)	268, 379, 1264
BslI	CCNNNNNNNGG	4 cut(s)	241, 247, 301, 1039
BsmAI	GTCTC	1 cut(s)	94
BsmBI	CGTCTC	1 cut(s)	94
BsmFI	GGGAC	3 cut(s)	268, 379, 1264
BsnI	GGCC	6 cut(s)	105, 167, 222, 240, 293, 972
Bsp120I	GGGCCC	1 cut(s)	291
Bsp1286I	GDGCHC	3 cut(s)	295, 327, 615
Bsp13I	TCCGGA	1 cut(s)	1019
Bsp1407I	TGTACA	1 cut(s)	1098
Bsp143I	GATC	5 cut(s)	207, 252, 445, 541, 1138
BspANI	GGCC	6 cut(s)	105, 167, 222, 240, 293, 972
BspCNI	CTCAG	4 cut(s)	351, 595, 823, 1219
BspEI	TCCGGA	1 cut(s)	1019
BspFNI	CGCG	2 cut(s)	21, 201
BspLI	GGNNCC	6 cut(s)	269, 293, 294, 567, 1071, 1450
BspPI	GGATC	1 cut(s)	453
BsrDI	GCAATG	2 cut(s)	437, 691
BsrFI	RCCGGY	1 cut(s)	218
BsrGI	TGTACA	1 cut(s)	1098
BsrI	ACTGG	4 cut(s)	293, 422, 723, 1468
BssAI	RCCGGY	1 cut(s)	218
BssECI	CCNNGG	5 cut(s)	100, 162, 235, 271, 550
BssMI	GATC	5 cut(s)	207, 252, 445, 541, 1138
BssNI	GRCGYC	2 cut(s)	144, 213
BssSI	CACGAG	1 cut(s)	260
BssT1I	CCWWGG	2 cut(s)	100, 162
Bst2BI	CACGAG	1 cut(s)	260
Bst2UI	CCWGG	5 cut(s)	236, 242, 272, 302, 497
Bst4CI	ACNGT	4 cut(s)	88, 181, 385, 644
Bst6I	CTCTTC	1 cut(s)	1340
BstACI	GRCGYC	2 cut(s)	144, 213
BstAPI	GCANNNNNTGC	1 cut(s)	63
BstAUI	TGTACA	1 cut(s)	1098
BstBAI	YACGTR	1 cut(s)	171
BstC8I	GCNNGC	4 cut(s)	199, 220, 974, 1030
BstDEI	CTNAG	4 cut(s)	359, 603, 831, 1227
BstDSI	CCRYGG	1 cut(s)	550
BstF5I	GGATG	6 cut(s)	48, 57, 613, 787, 1028, 1126
BstFNI	CGCG	2 cut(s)	21, 201
BstH2I	RGCGCY	1 cut(s)	40
BstHHI	GCGC	2 cut(s)	21, 39
BstKTI	GATC	5 cut(s)	210, 255, 448, 544, 1141
BstMAI	GTCTC	1 cut(s)	94
BstMBI	GATC	5 cut(s)	207, 252, 445, 541, 1138
BstMWI	GCNNNNNNNGC	5 cut(s)	63, 228, 237, 681, 761
BstNI	CCWGG	5 cut(s)	236, 242, 272, 302, 497
BstSCI	CCNGG	5 cut(s)	234, 240, 270, 300, 495
BstSLI	GKGCMC	2 cut(s)	295, 615
BstUI	CGCG	2 cut(s)	21, 201
BstV1I	GCAGC	9 cut(s)	78, 243, 342, 360, 512, 611, 853, 1071, 1074
BstV2I	GAAGAC	1 cut(s)	829
BstXI	CCANNNNNNTGG	1 cut(s)	334
BsuI	GTATCC	1 cut(s)	1007
BsuRI	GGCC	6 cut(s)	105, 167, 222, 240, 293, 972
BtgI	CCRYGG	1 cut(s)	550
BtrI	CACGTC	1 cut(s)	136
BtsCI	GGATG	6 cut(s)	48, 57, 613, 787, 1028, 1126
BtsI	GCAGTG	1 cut(s)	114
BtsIMutI	CAGTG	8 cut(s)	114, 286, 649, 730, 953, 1240, 1340, 1408
Cac8I	GCNNGC	4 cut(s)	199, 220, 974, 1030
CaiI	CAGNNNCTG	1 cut(s)	899
CfoI	GCGC	2 cut(s)	21, 39
Cfr10I	RCCGGY	1 cut(s)	218
Cfr13I	GGNCC	3 cut(s)	238, 291, 292
CseI	GACGC	3 cut(s)	80, 152, 221
Csp6I	GTAC	7 cut(s)	298, 493, 714, 738, 941, 1099, 1378
CviAII	CATG	2 cut(s)	205, 256
CviQI	GTAC	7 cut(s)	298, 493, 714, 738, 941, 1099, 1378
DdeI	CTNAG	4 cut(s)	359, 603, 831, 1227
DpnI	GATC	5 cut(s)	209, 254, 447, 543, 1140
DpnII	GATC	5 cut(s)	207, 252, 445, 541, 1138
DrdI	GACNNNNNNGTC	2 cut(s)	86, 134
DseDI	GACNNNNNNGTC	2 cut(s)	86, 134
EaeI	YGGCCR	1 cut(s)	970
Eam1104I	CTCTTC	1 cut(s)	1340
EarI	CTCTTC	1 cut(s)	1340
EciI	GGCGGA	2 cut(s)	82, 362
Eco130I	CCWWGG	2 cut(s)	100, 162
Eco147I	AGGCCT	1 cut(s)	105
Eco24I	GRGCYC	2 cut(s)	295, 327
Eco47III	AGCGCT	1 cut(s)	38
Eco57I	CTGAAG	2 cut(s)	929, 1364
Eco72I	CACGTG	1 cut(s)	171
EcoO109I	RGGNCCY	1 cut(s)	292
EcoRII	CCWGG	5 cut(s)	234, 240, 270, 300, 495
EcoT14I	CCWWGG	2 cut(s)	100, 162
EcoT22I	ATGCAT	1 cut(s)	1126
EcoT38I	GRGCYC	2 cut(s)	295, 327
ErhI	CCWWGG	2 cut(s)	100, 162
Esp3I	CGTCTC	1 cut(s)	94
FaeI	CATG	2 cut(s)	208, 259
FaqI	GGGAC	3 cut(s)	268, 379, 1264
FatI	CATG	2 cut(s)	204, 255
FauI	CCCGC	2 cut(s)	42, 1287
FauNDI	CATATG	3 cut(s)	847, 1126, 1176
FbaI	TGATCA	1 cut(s)	541
FblI	GTMKAC	1 cut(s)	458
FokI	GGATG	6 cut(s)	44, 55, 620, 794, 1035, 1133
FriOI	GRGCYC	2 cut(s)	295, 327
FspBI	CTAG	5 cut(s)	522, 711, 735, 759, 1148
GlaI	GCGC	2 cut(s)	20, 38
HaeII	RGCGCY	1 cut(s)	40
HaeIII	GGCC	6 cut(s)	105, 167, 222, 240, 293, 972
HapII	CCGG	4 cut(s)	219, 314, 1020, 1446
HgaI	GACGC	3 cut(s)	80, 152, 221
HhaI	GCGC	2 cut(s)	21, 39
Hin1I	GRCGYC	2 cut(s)	144, 213
Hin1II	CATG	2 cut(s)	208, 259
Hin6I	GCGC	2 cut(s)	19, 37
HinP1I	GCGC	2 cut(s)	19, 37
HincII	GTYRAC	2 cut(s)	459, 1251
HindII	GTYRAC	2 cut(s)	459, 1251
HinfI	GANTC	6 cut(s)	156, 555, 647, 689, 701, 1413
HpaII	CCGG	4 cut(s)	219, 314, 1020, 1446
HphI	GGTGA	4 cut(s)	169, 178, 397, 1478
Hpy166II	GTNNAC	4 cut(s)	459, 613, 1251, 1469
Hpy188I	TCNGA	9 cut(s)	534, 560, 652, 1042, 1195, 1216, 1422, 1430, 1482
Hpy188III	TCNNGA	3 cut(s)	77, 340, 1020
Hpy8I	GTNNAC	4 cut(s)	459, 613, 1251, 1469
Hpy99I	CGWCG	6 cut(s)	74, 140, 146, 152, 215, 230
HpyAV	CCTTC	3 cut(s)	47, 382, 674
HpyCH4III	ACNGT	4 cut(s)	88, 181, 385, 644
HpyCH4IV	ACGT	2 cut(s)	135, 170
HpyF10VI	GCNNNNNNNGC	5 cut(s)	63, 228, 237, 681, 761
HpyF3I	CTNAG	4 cut(s)	359, 603, 831, 1227
HpySE526I	ACGT	2 cut(s)	135, 170
Hsp92I	GRCGYC	2 cut(s)	144, 213
Hsp92II	CATG	2 cut(s)	208, 259
HspAI	GCGC	2 cut(s)	19, 37
Kpn2I	TCCGGA	1 cut(s)	1019
KroI	GCCGGC	1 cut(s)	218
KroNI	GCCGGC	1 cut(s)	220
Ksp22I	TGATCA	1 cut(s)	541
Kzo9I	GATC	5 cut(s)	207, 252, 445, 541, 1138
LmnI	GCTCC	6 cut(s)	267, 277, 316, 352, 370, 827
Lsp1109I	GCAGC	9 cut(s)	78, 243, 342, 360, 512, 611, 853, 1071, 1074
LweI	GCATC	6 cut(s)	66, 638, 965, 985, 1111, 1380
MaeI	CTAG	5 cut(s)	522, 711, 735, 759, 1148
MaeII	ACGT	2 cut(s)	135, 170
MaeIII	GTNAC	3 cut(s)	112, 1110, 1456
MalI	GATC	5 cut(s)	209, 254, 447, 543, 1140
MboI	GATC	5 cut(s)	207, 252, 445, 541, 1138
MboII	GAAGA	4 cut(s)	689, 829, 1017, 1357
MhlI	GDGCHC	3 cut(s)	295, 327, 615
MlsI	TGGCCA	1 cut(s)	972
MluCI	AATT	6 cut(s)	450, 464, 1162, 1208, 1315, 1424
MluNI	TGGCCA	1 cut(s)	972
MlyI	GAGTC	2 cut(s)	564, 698
MmeI	TCCRAC	4 cut(s)	390, 538, 675, 805
Mox20I	TGGCCA	1 cut(s)	972
Mph1103I	ATGCAT	1 cut(s)	1126
MroI	TCCGGA	1 cut(s)	1019
MroNI	GCCGGC	1 cut(s)	218
MscI	TGGCCA	1 cut(s)	972
MseI	TTAA	2 cut(s)	585, 1062
MslI	CAYNNNNRTG	1 cut(s)	882
Msp20I	TGGCCA	1 cut(s)	972
MspA1I	CMGCKG	1 cut(s)	602
MspI	CCGG	4 cut(s)	219, 314, 1020, 1446
MspR9I	CCNGG	5 cut(s)	236, 242, 272, 302, 497
MvaI	CCWGG	5 cut(s)	236, 242, 272, 302, 497
MvnI	CGCG	2 cut(s)	21, 201
MwoI	GCNNNNNNNGC	5 cut(s)	63, 228, 237, 681, 761
NaeI	GCCGGC	1 cut(s)	220
NdeI	CATATG	3 cut(s)	847, 1126, 1176
NdeII	GATC	5 cut(s)	207, 252, 445, 541, 1138
NgoMIV	GCCGGC	1 cut(s)	218
NlaIII	CATG	2 cut(s)	208, 259
NlaIV	GGNNCC	6 cut(s)	269, 293, 294, 567, 1071, 1450
NmuCI	GTSAC	1 cut(s)	112
NsiI	ATGCAT	1 cut(s)	1126
PceI	AGGCCT	1 cut(s)	105
PcsI	WCGNNNNNNNCGW	2 cut(s)	84, 144
PdiI	GCCGGC	1 cut(s)	220
PfeI	GAWTC	4 cut(s)	156, 647, 701, 1413
PflFI	GACNNNGTC	1 cut(s)	146
PleI	GAGTC	2 cut(s)	563, 697
PmaCI	CACGTG	1 cut(s)	171
PmlI	CACGTG	1 cut(s)	171
PpsI	GAGTC	2 cut(s)	563, 697
Ppu21I	YACGTR	1 cut(s)	171
Psp6I	CCWGG	5 cut(s)	234, 240, 270, 300, 495
PspCI	CACGTG	1 cut(s)	171
PspGI	CCWGG	5 cut(s)	234, 240, 270, 300, 495
PspN4I	GGNNCC	6 cut(s)	269, 293, 294, 567, 1071, 1450
PspOMI	GGGCCC	1 cut(s)	291
PspPI	GGNCC	3 cut(s)	238, 291, 292
PstNI	CAGNNNCTG	1 cut(s)	899
PsyI	GACNNNGTC	1 cut(s)	146
PvuII	CAGCTG	1 cut(s)	602
RsaI	GTAC	7 cut(s)	299, 494, 715, 739, 942, 1100, 1379
RsaNI	GTAC	7 cut(s)	298, 493, 714, 738, 941, 1099, 1378
RseI	CAYNNNNRTG	1 cut(s)	882
SalI	GTCGAC	1 cut(s)	457
SaqAI	TTAA	2 cut(s)	585, 1062
Sau3AI	GATC	5 cut(s)	207, 252, 445, 541, 1138
Sau96I	GGNCC	3 cut(s)	238, 291, 292
ScaI	AGTACT	1 cut(s)	739
SchI	GAGTC	2 cut(s)	564, 698
ScrFI	CCNGG	5 cut(s)	236, 242, 272, 302, 497
SduI	GDGCHC	3 cut(s)	295, 327, 615
SfaNI	GCATC	6 cut(s)	66, 638, 965, 985, 1111, 1380
SmiMI	CAYNNNNRTG	1 cut(s)	882
SpeI	ACTAGT	1 cut(s)	710
Sse9I	AATT	6 cut(s)	450, 464, 1162, 1208, 1315, 1424
SseBI	AGGCCT	1 cut(s)	105
SspI	AATATT	1 cut(s)	1046
SspMI	CTAG	5 cut(s)	522, 711, 735, 759, 1148
StuI	AGGCCT	1 cut(s)	105
StyD4I	CCNGG	5 cut(s)	234, 240, 270, 300, 495
StyI	CCWWGG	2 cut(s)	100, 162
TaaI	ACNGT	4 cut(s)	88, 181, 385, 644
TaiI	ACGT	2 cut(s)	138, 173
TaqI	TCGA	5 cut(s)	78, 210, 225, 458, 927
TasI	AATT	6 cut(s)	450, 464, 1162, 1208, 1315, 1424
TatI	WGTACW	4 cut(s)	713, 737, 940, 1098
TauI	GCSGC	3 cut(s)	14, 197, 218
TfiI	GAWTC	4 cut(s)	156, 647, 701, 1413
Tru1I	TTAA	2 cut(s)	585, 1062
Tru9I	TTAA	2 cut(s)	585, 1062
TscAI	CASTG	8 cut(s)	121, 293, 649, 730, 953, 1240, 1347, 1408
TseFI	GTSAC	1 cut(s)	112
TseI	GCWGC	9 cut(s)	66, 231, 355, 373, 500, 599, 866, 1084, 1087
Tsp45I	GTSAC	1 cut(s)	112
TspDTI	ATGAA	2 cut(s)	59, 714
TspGWI	ACGGA	4 cut(s)	100, 321, 383, 567
TspRI	CASTG	8 cut(s)	121, 293, 649, 730, 953, 1240, 1347, 1408
Tth111I	GACNNNGTC	1 cut(s)	146
VneI	GTGCAC	1 cut(s)	611
XapI	RAATTY	3 cut(s)	1162, 1315, 1424
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1174, 1460
XmiI	GTMKAC	1 cut(s)	458
XspI	CTAG	5 cut(s)	522, 711, 735, 759, 1148
ZrmI	AGTACT	1 cut(s)	739
Zsp2I	ATGCAT	1 cut(s)	1126

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.