AT3G62630

Protein of unknown function (DUF1645)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0002353
Physical Location & Seq
Reverse (-)
23163747 .. 23165387
1641 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G62630.1

Sequence Viewer

Length: 1143 bp
ATGGATCTTGTTGAGAGTTTTTCCCATGGCGATCCTGATACTCCGCGTTTCAGTGACGACTTCGGTTCTGGCTCTGCTTGCTCTACTCCGTTCGTTAGCGCTCCGTCTAGTCCCGGCCGTGGTCCTCCGCCTGGTTATTTCTTCAGTGCACCGTCGAGTCCGATGCATTTCTTCCTTTGCTCTGCTTCTTCTTCATCGGAGAATCCTAAAAAGCTTGACACGTCTTCATGCGGCGACTTTGAGTTTGACTTCTCGTCGAGGTTGTCTTCAAGCAGTGGTCCTTTAGGCGGTGTTTCCATGACTTCAGCTGAAGAGCTTTTCTCTAATGGCCAGATCAAGCCAATGAAGCTCTCTTCGCATCTTCAGAGACCTCAGATCTTATCTCCGCTTCTAGATCTGGAGAACGAGGAAGAAGACGACGATGATGAGACCAAACCAAACGGTGAGATGAAGCGTGGGAGAGATCTGAAACTAAGAAGCAGATCTGTTCACCGGAAGGCCAGATCCCTCTCTCCGCTCCGAAACGCAGCGTATCAATGGAACCAAGAAGAAGGAGAAGAAGAAGAAGTCGCCGGAGAGAGAGAAGTTAAAGAGTGTATAAGAAAGCTTCAAGAAGACGAAAACGTGCCTTCAGCTGAAACGACACCGTCTTGTTCTGCTTCTTCTTCACGATCATCGTCTTACGGTAGAAACTCTAAGAAATGGATCTTTCTTAAAGATCTGCTTCACAGAAGCAAAAGCGAAGGAAGAGGCAACGGGAAAGAGAAGTTCTGGTCCAACATTTCCTTCTCTCCTTCCAATTTCAAAGACAAGAAACTCAAATCATCTCAACTTGAAGAGAAACCGATTCAAGAAACAGTTGACGCTGCCGTGGAATCAAAGAAGCAGAAGCAGAAACAACCGCCGGCGAAGAAAGCTCCGGTTAACGGAAAACCAACCAACGGGATAGCAAAACGGAGAGGATTGCAGCCGTCTGCTCACGAGCTACATTACACAACGAACAGAGCTCAAGCAGAGGAAATGAAGAAGAGAACATATTTGCCTTACAGGCATGGACTCTTTGGTTGTTTAGGGTTTAGTTCCAAAGGTTACAGTGCCTTGAACGGTTTAGCCCGTAGCTTAAACCCAGTTTCATCTGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1645

Protein Analysis

380

Amino Acids

41.87

Weight (kDa)

8.72

Isoelectric Point (pI)

62.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1645 PF07816 103 - 348 5.7e-48 Protein of unknown function (DUF1645)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 517
AccII CGCG 1 cut(s) 46
AciI CCGC 7 cut(s) 44, 128, 231, 288, 386, 515, 902
AclWI GGATC 4 cut(s) 12, 26, 498, 713
AcoI YGGCCR 2 cut(s) 115, 328
AcuI CTGAAG 5 cut(s) 127, 288, 330, 347, 615
AfeI AGCGCT 1 cut(s) 100
AfiI CCNNNNNNNGG 5 cut(s) 119, 131, 287, 926, 941
AflIII ACRYGT 1 cut(s) 219
AgsI TTSAA 6 cut(s) 270, 611, 805, 836, 851, 1102
AhdI GACNNNNNGTC 1 cut(s) 253
AjiI CACGTC 1 cut(s) 222
AjnI CCWGG 1 cut(s) 130
AjuI GAANNNNNNNTTGG 2 cut(s) 770, 802
Alw21I GWGCWC 2 cut(s) 151, 1009
Alw26I GTCTC 2 cut(s) 361, 422
Alw44I GTGCAC 1 cut(s) 147
AlwI GGATC 4 cut(s) 12, 26, 498, 713
Aor51HI AGCGCT 1 cut(s) 100
AoxI GGCC 3 cut(s) 115, 328, 498
ApaLI GTGCAC 1 cut(s) 147
ApeKI GCWGC 3 cut(s) 527, 866, 967
ArsI GACNNNNNNTTYG 2 cut(s) 227, 259
AspLEI GCGC 1 cut(s) 101
AspS9I GGNCC 3 cut(s) 122, 278, 774
AsuC2I CCSGG 1 cut(s) 114
AsuHPI GGTGA 2 cut(s) 455, 482
AvaII GGWCC 3 cut(s) 122, 278, 774
BaeGI GKGCMC 1 cut(s) 151
BalI TGGCCA 1 cut(s) 330
BanII GRGCYC 1 cut(s) 1009
BauI CACGAG 1 cut(s) 980
BbsI GAAGAC 4 cut(s) 216, 258, 420, 621
Bbv12I GWGCWC 2 cut(s) 151, 1009
BbvI GCAGC 3 cut(s) 539, 853, 979
BceAI ACGGC 3 cut(s) 102, 854, 955
BcgI CGANNNNNNTGC 2 cut(s) 145, 179
BciT130I CCWGG 1 cut(s) 132
BcnI CCSGG 1 cut(s) 114
BcoDI GTCTC 2 cut(s) 361, 422
BfaI CTAG 2 cut(s) 108, 392
BfoI RGCGCY 1 cut(s) 102
BglI GCCNNNNNGGC 1 cut(s) 1048
BglII AGATCT 5 cut(s) 375, 394, 463, 482, 718
BisI GCNGC 4 cut(s) 232, 528, 867, 968
BlsI GCNGC 4 cut(s) 233, 529, 868, 969
Bme1390I CCNGG 2 cut(s) 114, 132
Bme18I GGWCC 3 cut(s) 122, 278, 774
BmeRI GACNNNNNGTC 1 cut(s) 253
BmgBI CACGTC 1 cut(s) 222
BmgT120I GGNCC 3 cut(s) 122, 278, 774
BmiI GGNNCC 1 cut(s) 542
BmrFI CCNGG 2 cut(s) 114, 132
BmrI ACTGGG 1 cut(s) 1121
BmsI GCATC 2 cut(s) 153, 367
BmuI ACTGGG 1 cut(s) 1121
BpiI GAAGAC 4 cut(s) 216, 258, 420, 621
BplI GAGNNNNNCTC 2 cut(s) 305, 337
BpmI CTGGAG 1 cut(s) 419
BpuEI CTTGAG 1 cut(s) 993
BpuMI CCSGG 1 cut(s) 114
BsaI GGTCTC 2 cut(s) 361, 422
BsaJI CCNNGG 3 cut(s) 25, 118, 870
BsaWI WCCGGW 2 cut(s) 492, 919
Bsc4I CCNNNNNNNGG 5 cut(s) 119, 131, 287, 926, 941
Bse118I RCCGGY 1 cut(s) 904
Bse1I ACTGG 1 cut(s) 1127
BseBI CCWGG 1 cut(s) 132
BseDI CCNNGG 3 cut(s) 25, 118, 870
BseLI CCNNNNNNNGG 5 cut(s) 119, 131, 287, 926, 941
BseMII CTCAG 1 cut(s) 386
BseNI ACTGG 1 cut(s) 1127
BseSI GKGCMC 1 cut(s) 151
BseX3I CGGCCG 1 cut(s) 115
BseXI GCAGC 3 cut(s) 539, 853, 979
Bsh1236I CGCG 1 cut(s) 46
Bsh1285I CGRYCG 1 cut(s) 118
BshFI GGCC 3 cut(s) 117, 330, 500
BsiEI CGRYCG 1 cut(s) 118
BsiHKAI GWGCWC 2 cut(s) 151, 1009
BsiSI CCGG 5 cut(s) 114, 493, 573, 905, 920
BslFI GGGAC 1 cut(s) 96
BslI CCNNNNNNNGG 5 cut(s) 119, 131, 287, 926, 941
BsmAI GTCTC 2 cut(s) 361, 422
BsmFI GGGAC 1 cut(s) 96
BsnI GGCC 3 cut(s) 117, 330, 500
Bso31I GGTCTC 2 cut(s) 361, 422
Bsp1286I GDGCHC 2 cut(s) 151, 1009
Bsp19I CCATGG 1 cut(s) 25
BspACI CCGC 7 cut(s) 44, 128, 231, 288, 386, 515, 902
BspANI GGCC 3 cut(s) 117, 330, 500
BspCNI CTCAG 1 cut(s) 385
BspFNI CGCG 1 cut(s) 46
BspLI GGNNCC 1 cut(s) 542
BspPI GGATC 4 cut(s) 12, 26, 498, 713
BspQI GCTCTTC 1 cut(s) 306
BspTNI GGTCTC 2 cut(s) 361, 422
BsrBI CCGCTC 1 cut(s) 517
BsrFI RCCGGY 1 cut(s) 904
BsrI ACTGG 1 cut(s) 1127
BssAI RCCGGY 1 cut(s) 904
BssECI CCNNGG 3 cut(s) 25, 118, 870
BssSI CACGAG 1 cut(s) 980
BssT1I CCWWGG 1 cut(s) 25
Bst2BI CACGAG 1 cut(s) 980
Bst2UI CCWGG 1 cut(s) 132
Bst4CI ACNGT 7 cut(s) 153, 443, 648, 686, 859, 1094, 1106
Bst6I CTCTTC 5 cut(s) 306, 358, 742, 831, 1022
BstC8I GCNNGC 2 cut(s) 79, 906
BstDEI CTNAG 3 cut(s) 372, 473, 696
BstDSI CCRYGG 3 cut(s) 25, 118, 870
BstFNI CGCG 1 cut(s) 46
BstH2I RGCGCY 1 cut(s) 102
BstHHI GCGC 1 cut(s) 101
BstMAI GTCTC 2 cut(s) 361, 422
BstMCI CGRYCG 1 cut(s) 118
BstMWI GCNNNNNNNGC 5 cut(s) 78, 346, 355, 914, 1048
BstNI CCWGG 1 cut(s) 132
BstSCI CCNGG 2 cut(s) 112, 130
BstSLI GKGCMC 1 cut(s) 151
BstUI CGCG 1 cut(s) 46
BstV1I GCAGC 3 cut(s) 539, 853, 979
BstV2I GAAGAC 4 cut(s) 216, 258, 420, 621
BstX2I RGATCY 8 cut(s) 4, 375, 394, 463, 482, 503, 705, 718
BstYI RGATCY 8 cut(s) 4, 375, 394, 463, 482, 503, 705, 718
BstZI CGGCCG 1 cut(s) 115
BsuRI GGCC 3 cut(s) 117, 330, 500
BtgI CCRYGG 3 cut(s) 25, 118, 870
BtrI CACGTC 1 cut(s) 222
BtsI GCAGTG 1 cut(s) 280
BtsIMutI CAGTG 4 cut(s) 58, 151, 280, 1099
Cac8I GCNNGC 2 cut(s) 79, 906
CfoI GCGC 1 cut(s) 101
Cfr10I RCCGGY 1 cut(s) 904
Cfr13I GGNCC 3 cut(s) 122, 278, 774
CseI GACGC 1 cut(s) 872
CviAII CATG 4 cut(s) 26, 228, 298, 1052
DdeI CTNAG 3 cut(s) 372, 473, 696
DriI GACNNNNNGTC 1 cut(s) 253
EaeI YGGCCR 2 cut(s) 115, 328
EagI CGGCCG 1 cut(s) 115
Eam1104I CTCTTC 5 cut(s) 306, 358, 742, 831, 1022
Eam1105I GACNNNNNGTC 1 cut(s) 253
EarI CTCTTC 5 cut(s) 306, 358, 742, 831, 1022
EciI GGCGGA 1 cut(s) 117
Ecl136II GAGCTC 1 cut(s) 1007
EclXI CGGCCG 1 cut(s) 115
Eco130I CCWWGG 1 cut(s) 25
Eco24I GRGCYC 1 cut(s) 1009
Eco31I GGTCTC 2 cut(s) 361, 422
Eco47I GGWCC 3 cut(s) 122, 278, 774
Eco47III AGCGCT 1 cut(s) 100
Eco52I CGGCCG 1 cut(s) 115
Eco53kI GAGCTC 1 cut(s) 1007
Eco57I CTGAAG 5 cut(s) 127, 288, 330, 347, 615
EcoICRI GAGCTC 1 cut(s) 1007
EcoRII CCWGG 1 cut(s) 130
EcoT14I CCWWGG 1 cut(s) 25
EcoT22I ATGCAT 1 cut(s) 168
EcoT38I GRGCYC 1 cut(s) 1009
ErhI CCWWGG 1 cut(s) 25
FaeI CATG 4 cut(s) 29, 231, 301, 1055
FaiI YATR 6 cut(s) 27, 229, 299, 599, 1036, 1053
FalI AAGNNNNNCTT 2 cut(s) 708, 740
FaqI GGGAC 1 cut(s) 96
FatI CATG 4 cut(s) 25, 227, 297, 1051
Fnu4HI GCNGC 4 cut(s) 232, 528, 867, 968
FriOI GRGCYC 1 cut(s) 1009
Fsp4HI GCNGC 4 cut(s) 232, 528, 867, 968
FspBI CTAG 2 cut(s) 108, 392
GlaI GCGC 1 cut(s) 100
GluI GCNGC 4 cut(s) 232, 528, 867, 968
GsuI CTGGAG 1 cut(s) 419
HaeII RGCGCY 1 cut(s) 102
HaeIII GGCC 3 cut(s) 117, 330, 500
HapII CCGG 5 cut(s) 114, 493, 573, 905, 920
HgaI GACGC 1 cut(s) 872
HhaI GCGC 1 cut(s) 101
Hin1II CATG 4 cut(s) 29, 231, 301, 1055
Hin6I GCGC 1 cut(s) 99
HinP1I GCGC 1 cut(s) 99
HincII GTYRAC 2 cut(s) 862, 925
HindII GTYRAC 2 cut(s) 862, 925
HindIII AAGCTT 2 cut(s) 212, 605
HinfI GANTC 5 cut(s) 157, 202, 847, 875, 1056
HpaI GTTAAC 1 cut(s) 925
HpaII CCGG 5 cut(s) 114, 493, 573, 905, 920
HphI GGTGA 2 cut(s) 455, 482
Hpy166II GTNNAC 4 cut(s) 149, 490, 862, 925
Hpy188I TCNGA 6 cut(s) 162, 199, 366, 375, 468, 521
Hpy188III TCNNGA 7 cut(s) 35, 392, 398, 611, 669, 851, 980
Hpy8I GTNNAC 4 cut(s) 149, 490, 862, 925
Hpy99I CGWCG 3 cut(s) 157, 259, 422
HpyAV CCTTC 6 cut(s) 490, 545, 639, 737, 796, 804
HpyCH4III ACNGT 7 cut(s) 153, 443, 648, 686, 859, 1094, 1106
HpyCH4IV ACGT 2 cut(s) 221, 624
HpyCH4V TGCA 3 cut(s) 149, 166, 967
HpyF10VI GCNNNNNNNGC 5 cut(s) 78, 346, 355, 914, 1048
HpyF3I CTNAG 3 cut(s) 372, 473, 696
HpySE526I ACGT 2 cut(s) 221, 624
Hsp92II CATG 4 cut(s) 29, 231, 301, 1055
HspAI GCGC 1 cut(s) 99
KroI GCCGGC 1 cut(s) 904
KroNI GCCGGC 1 cut(s) 906
KspAI GTTAAC 1 cut(s) 925
LguI GCTCTTC 1 cut(s) 306
LmnI GCTCC 3 cut(s) 106, 522, 922
Lsp1109I GCAGC 3 cut(s) 539, 853, 979
LweI GCATC 2 cut(s) 153, 367
MaeI CTAG 2 cut(s) 108, 392
MaeII ACGT 2 cut(s) 221, 624
MaeIII GTNAC 2 cut(s) 53, 1088
MbiI CCGCTC 1 cut(s) 517
MflI RGATCY 8 cut(s) 4, 375, 394, 463, 482, 503, 705, 718
MhlI GDGCHC 2 cut(s) 151, 1009
MlsI TGGCCA 1 cut(s) 330
MluCI AATT 1 cut(s) 799
MluNI TGGCCA 1 cut(s) 330
MlyI GAGTC 2 cut(s) 166, 1050
MmeI TCCRAC 1 cut(s) 801
MnlI CCTC 8 cut(s) 135, 252, 381, 400, 518, 743, 953, 1009
Mox20I TGGCCA 1 cut(s) 330
Mph1103I ATGCAT 1 cut(s) 168
MreI CGCCGGCG 1 cut(s) 904
MroNI GCCGGC 1 cut(s) 904
MscI TGGCCA 1 cut(s) 330
MseI TTAA 5 cut(s) 588, 714, 924, 1121, 1141
Msp20I TGGCCA 1 cut(s) 330
MspA1I CMGCKG 2 cut(s) 308, 635
MspI CCGG 5 cut(s) 114, 493, 573, 905, 920
MspR9I CCNGG 2 cut(s) 114, 132
MvaI CCWGG 1 cut(s) 132
MvnI CGCG 1 cut(s) 46
MwoI GCNNNNNNNGC 5 cut(s) 78, 346, 355, 914, 1048
NaeI GCCGGC 1 cut(s) 906
NciI CCSGG 1 cut(s) 114
NcoI CCATGG 1 cut(s) 25
NgoMIV GCCGGC 1 cut(s) 904
NlaIII CATG 4 cut(s) 29, 231, 301, 1055
NlaIV GGNNCC 1 cut(s) 542
NmuCI GTSAC 1 cut(s) 53
NsiI ATGCAT 1 cut(s) 168
PciSI GCTCTTC 1 cut(s) 306
PdiI GCCGGC 1 cut(s) 906
PfeI GAWTC 3 cut(s) 202, 847, 875
PflFI GACNNNGTC 1 cut(s) 646
PkrI GCNGC 4 cut(s) 233, 529, 868, 969
PleI GAGTC 2 cut(s) 165, 1050
PpsI GAGTC 2 cut(s) 165, 1050
Psp124BI GAGCTC 1 cut(s) 1009
Psp6I CCWGG 1 cut(s) 130
PspGI CCWGG 1 cut(s) 130
PspN4I GGNNCC 1 cut(s) 542
PspPI GGNCC 3 cut(s) 122, 278, 774
PsuI RGATCY 8 cut(s) 4, 375, 394, 463, 482, 503, 705, 718
PsyI GACNNNGTC 1 cut(s) 646
PvuII CAGCTG 2 cut(s) 308, 635
SacI GAGCTC 1 cut(s) 1009
SapI GCTCTTC 1 cut(s) 306
SaqAI TTAA 5 cut(s) 588, 714, 924, 1121, 1141
SatI GCNGC 4 cut(s) 232, 528, 867, 968
Sau96I GGNCC 3 cut(s) 122, 278, 774
SchI GAGTC 2 cut(s) 166, 1050
ScrFI CCNGG 2 cut(s) 114, 132
SduI GDGCHC 2 cut(s) 151, 1009
SfaNI GCATC 2 cut(s) 153, 367
SgrAI CRCCGGYG 1 cut(s) 904
SinI GGWCC 3 cut(s) 122, 278, 774
SmlI CTYRAG 1 cut(s) 1008
SmoI CTYRAG 1 cut(s) 1008
Sse9I AATT 1 cut(s) 799
SsiI CCGC 7 cut(s) 44, 128, 231, 288, 386, 515, 902
SspMI CTAG 2 cut(s) 108, 392
SstI GAGCTC 1 cut(s) 1009
StyD4I CCNGG 2 cut(s) 112, 130
StyI CCWWGG 1 cut(s) 25
TaaI ACNGT 7 cut(s) 153, 443, 648, 686, 859, 1094, 1106
TaiI ACGT 2 cut(s) 224, 627
TaqI TCGA 2 cut(s) 155, 257
TasI AATT 1 cut(s) 799
TauI GCSGC 1 cut(s) 234
TfiI GAWTC 3 cut(s) 202, 847, 875
Tru1I TTAA 5 cut(s) 588, 714, 924, 1121, 1141
Tru9I TTAA 5 cut(s) 588, 714, 924, 1121, 1141
TscAI CASTG 4 cut(s) 58, 151, 280, 1099
TseFI GTSAC 1 cut(s) 53
TseI GCWGC 3 cut(s) 527, 866, 967
Tsp45I GTSAC 1 cut(s) 53
TspDTI ATGAA 6 cut(s) 183, 216, 359, 464, 1037, 1122
TspGWI ACGGA 4 cut(s) 78, 93, 942, 970
TspRI CASTG 4 cut(s) 58, 151, 280, 1099
Tth111I GACNNNGTC 1 cut(s) 646
VneI GTGCAC 1 cut(s) 147
VpaK11BI GGWCC 3 cut(s) 122, 278, 774
XbaI TCTAGA 1 cut(s) 391
XspI CTAG 2 cut(s) 108, 392
Zsp2I ATGCAT 1 cut(s) 168
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.