AT5G37350

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
14792819 .. 14796045
3227 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G37350.2

Sequence Viewer

Length: 1596 bp
ATGGAGGAAGTAGTGGTAGTTGCAGAGCCACCACCGAAGATTACTCCCTTTGTGGAATACGAAGAAGAGCTTGAAGATGATGACGATGATCTCTCGCTTTCGTCAGATTCCGATATCGCTGAAGCTCTTGATTGGCTAGACGGTAAAGACGATGACGAGCTAATTGGTGGTGGCTTTTCTCTTCATGCTCGTCGTCCTAATGCTCACGGTGGACATGGTTCACGCCCTAACTCTAGTGCTCTTCAGCCTATTTCAAATAAGGCCCAGAAGCTTACTAGTCACGTTCGTGCTTCTCCTTTGGAGGGATGGGAAGGAAGAGTTAAAGTTGGGATGTCGAATTCTGTGACAACTGCGATTCGTGGAAGTCTTAGAGATACAGAAATTGGGAGAAGTAGGAATACTGATAAAGCGGACCGGGCAACTGTTGAACAGGCTCTTGATCCAAGGACGCGTATGGTATTGTTTAGAATGCTTAATAGGGGTGTGTTTAACGATGTTAATGGCTGTATCTCGACAGGCAAAGAAGCAAATGTTTATCATGCCACAAAATCTGACGGTTCGGAACTTGCAATAAAAGTGTACAAGACATCTGTTCTGGTTTTCAAGGATCGAGATCGATATGTACAAGGAGATTACCGTTTTAGATATGGCTACTGTCGTCACAATCCTCGAAAGATGGTGAAGACATGGGCTGAAAAAGAACAGAGAAATCTCAAGAGGCTTCATGCAGCAGGAATTAGGTGTCCAGCTGTTATACTTCTACGCCTTCATGTTCTAGTCATGGAGTTTATAGGGAGGGATGGTTGGGCTGCACCGCGTCTCAAGGATGCCGCATTGTCTCTGGACAAGTTGCGCGAGTGTTACTTAGAGTTGATAATTCAAATGCGAGTATTATATCAGAAGTGCAAATTAGTGCATGGGGATCTCAGTGAGTATAACATACTTTATTTTGAAGGGCACCTTTATATAATTGATGTTTCTCAATCTGTGGATCTGGACCATCCTCTTGCACTCAACTTTCTACGGGAAGATTGTGACCATGTCTCGGATTTTTTCAAAAAACATGGTGTGGCTGTTATGACAATACGAGAGCTATTTGACTTCATAGTTGACCCGACAATTTCAGACGAAAATGTTGATAGCTATTTGGAAGAGGTCCAACGGAAAGTTATAGAGCGAGGAGAGATATCCGTAGAGGATGAAATCGCGGATTCTGTATTCATGAAGTCATACATACCGAAATCTCTGGATGCTGTGAACAACCCAGAGGCTGATGTAGCGAAGATAACAAGCGGGCAGGACACAGGAGACATGCTGTACCAAACGATAACGGGGCTTAAGGATGCTCTTCCTAAAGTAGACGAGCAGCAAATAGAGGTGAATGCTGAAGAGGAAGAAGAAGAAGAGGAAGAGGGAAGTGGAGAAGAAAGCGAAGAAGAGAGTGAAAAAGAATTGGGTCCTGAAGACAAGAAAGCTGCAAGGAAAGAGCACAAGAAGAAAGTGAAAGAGGAGAAACGAGAGTCTAGGAAGACGAAAACACCCAAATCTGTCAAGAAGCGAAAAAAGAAAGTCTCTAAACCCCACAAGACTCGTTAG

Protein Analysis

531

Amino Acids

60.32

Weight (kDa)

5.52

Isoelectric Point (pI)

39.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RIO1 PF01163 31 - 218 1.9e-73 RIO domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 957
AccI GTMKAC 1 cut(s) 1359
AccII CGCG 4 cut(s) 451, 817, 855, 1208
AciI CCGC 5 cut(s) 410, 815, 831, 1208, 1293
AclWI GGATC 4 cut(s) 434, 615, 930, 999
AcsI RAATTY 1 cut(s) 337
AcuI CTGAAG 4 cut(s) 141, 227, 1407, 1482
AfaI GTAC 3 cut(s) 581, 624, 1319
AfiI CCNNNNNNNGG 2 cut(s) 302, 1045
AflII CTTAAG 1 cut(s) 1337
AflIII ACRYGT 1 cut(s) 449
AgsI TTSAA 7 cut(s) 74, 255, 428, 604, 881, 953, 1057
AhlI ACTAGT 1 cut(s) 275
AleI CACNNNNGTG 1 cut(s) 285
AluBI AGCT 8 cut(s) 70, 125, 160, 271, 749, 1093, 1143, 1475
AluI AGCT 8 cut(s) 70, 125, 160, 271, 749, 1093, 1143, 1475
Alw21I GWGCWC 2 cut(s) 241, 1491
Alw26I GTCTC 5 cut(s) 824, 843, 1048, 1302, 1576
AlwI GGATC 4 cut(s) 434, 615, 930, 999
AlwNI CAGNNNCTG 1 cut(s) 1271
AoxI GGCC 1 cut(s) 261
ApeKI GCWGC 4 cut(s) 728, 809, 1366, 1475
ApoI RAATTY 1 cut(s) 337
AspLEI GCGC 1 cut(s) 855
AspS9I GGNCC 5 cut(s) 262, 412, 997, 1156, 1457
AsuC2I CCSGG 1 cut(s) 416
AsuHPI GGTGA 2 cut(s) 691, 1390
AvaII GGWCC 4 cut(s) 412, 997, 1156, 1457
BaeGI GKGCMC 1 cut(s) 960
BanI GGYRCC 1 cut(s) 957
BarI GAAGNNNNNNTAC 2 cut(s) 382, 414
BbsI GAAGAC 3 cut(s) 689, 1470, 1535
Bbv12I GWGCWC 2 cut(s) 241, 1491
BbvI GCAGC 4 cut(s) 740, 796, 1378, 1462
BccI CCATC 4 cut(s) 300, 670, 794, 1008
BcnI CCSGG 1 cut(s) 416
BcoDI GTCTC 5 cut(s) 824, 843, 1048, 1302, 1576
BcuI ACTAGT 1 cut(s) 275
BfaI CTAG 5 cut(s) 137, 234, 276, 776, 1524
BfrI CTTAAG 1 cut(s) 1337
BisI GCNGC 5 cut(s) 729, 810, 831, 1367, 1476
BlsI GCNGC 5 cut(s) 730, 811, 832, 1368, 1477
Bme1390I CCNGG 1 cut(s) 416
Bme18I GGWCC 4 cut(s) 412, 997, 1156, 1457
BmgT120I GGNCC 5 cut(s) 262, 412, 997, 1156, 1457
BmiI GGNNCC 2 cut(s) 959, 1458
BmrFI CCNGG 1 cut(s) 416
BmsI GCATC 3 cut(s) 817, 1240, 1333
BpiI GAAGAC 3 cut(s) 689, 1470, 1535
BpuEI CTTGAG 2 cut(s) 698, 806
BpuMI CCSGG 1 cut(s) 416
Bsa29I ATCGAT 1 cut(s) 616
BsaBI GATNNNNATC 1 cut(s) 612
BsaJI CCNNGG 1 cut(s) 443
BsaXI ACNNNNNCTCC 2 cut(s) 787, 817
Bsc4I CCNNNNNNNGG 2 cut(s) 302, 1045
Bse8I GATNNNNATC 1 cut(s) 612
BseCI ATCGAT 1 cut(s) 616
BseDI CCNNGG 1 cut(s) 443
BseGI GGATG 8 cut(s) 311, 336, 805, 832, 1000, 1204, 1255, 1348
BseJI GATNNNNATC 1 cut(s) 612
BseLI CCNNNNNNNGG 2 cut(s) 302, 1045
BseMII CTCAG 1 cut(s) 940
BseRI GAGGAG 2 cut(s) 1194, 1523
BseSI GKGCMC 1 cut(s) 960
BseXI GCAGC 4 cut(s) 740, 796, 1378, 1462
BsgI GTGCAG 1 cut(s) 795
Bsh1236I CGCG 4 cut(s) 451, 817, 855, 1208
BshFI GGCC 1 cut(s) 263
BshNI GGYRCC 1 cut(s) 957
BshVI ATCGAT 1 cut(s) 616
BsiHKAI GWGCWC 2 cut(s) 241, 1491
BsiSI CCGG 1 cut(s) 415
BslI CCNNNNNNNGG 2 cut(s) 302, 1045
BsmAI GTCTC 5 cut(s) 824, 843, 1048, 1302, 1576
BsmBI CGTCTC 1 cut(s) 824
BsmI GAATGC 2 cut(s) 474, 1387
BsnI GGCC 1 cut(s) 263
Bsp1286I GDGCHC 3 cut(s) 241, 960, 1491
Bsp1407I TGTACA 2 cut(s) 579, 622
Bsp143I GATC 6 cut(s) 88, 439, 607, 613, 922, 991
BspACI CCGC 5 cut(s) 410, 815, 831, 1208, 1293
BspANI GGCC 1 cut(s) 263
BspCNI CTCAG 1 cut(s) 939
BspDI ATCGAT 1 cut(s) 616
BspFNI CGCG 4 cut(s) 451, 817, 855, 1208
BspHI TCATGA 1 cut(s) 1221
BspLI GGNNCC 2 cut(s) 959, 1458
BspPI GGATC 4 cut(s) 434, 615, 930, 999
BspQI GCTCTTC 3 cut(s) 60, 246, 1353
BspT107I GGYRCC 1 cut(s) 957
BspTI CTTAAG 1 cut(s) 1337
BsrGI TGTACA 2 cut(s) 579, 622
BssECI CCNNGG 1 cut(s) 443
BssMI GATC 6 cut(s) 88, 439, 607, 613, 922, 991
BssT1I CCWWGG 1 cut(s) 443
Bst4CI ACNGT 6 cut(s) 143, 209, 424, 557, 638, 656
BstAFI CTTAAG 1 cut(s) 1337
BstAUI TGTACA 2 cut(s) 579, 622
BstC8I GCNNGC 1 cut(s) 1295
BstDEI CTNAG 3 cut(s) 368, 865, 926
BstF5I GGATG 8 cut(s) 311, 336, 805, 832, 1000, 1204, 1255, 1348
BstFNI CGCG 4 cut(s) 451, 817, 855, 1208
BstHHI GCGC 1 cut(s) 855
BstKTI GATC 6 cut(s) 91, 442, 610, 616, 925, 994
BstMAI GTCTC 5 cut(s) 824, 843, 1048, 1302, 1576
BstMBI GATC 6 cut(s) 88, 439, 607, 613, 922, 991
BstMWI GCNNNNNNNGC 2 cut(s) 416, 1277
BstNSI RCATGY 1 cut(s) 1315
BstSCI CCNGG 1 cut(s) 414
BstSLI GKGCMC 1 cut(s) 960
BstUI CGCG 4 cut(s) 451, 817, 855, 1208
BstV1I GCAGC 4 cut(s) 740, 796, 1378, 1462
BstV2I GAAGAC 3 cut(s) 689, 1470, 1535
BstX2I RGATCY 2 cut(s) 922, 991
BstYI RGATCY 2 cut(s) 922, 991
Bsu15I ATCGAT 1 cut(s) 616
BsuRI GGCC 1 cut(s) 263
BsuTUI ATCGAT 1 cut(s) 616
BtsCI GGATG 8 cut(s) 311, 336, 805, 832, 1000, 1204, 1255, 1348
BtsIMutI CAGTG 1 cut(s) 934
Cac8I GCNNGC 1 cut(s) 1295
CaiI CAGNNNCTG 1 cut(s) 1271
CciI TCATGA 1 cut(s) 1221
CfoI GCGC 1 cut(s) 855
Cfr13I GGNCC 5 cut(s) 262, 412, 997, 1156, 1457
ClaI ATCGAT 1 cut(s) 616
CpoI CGGWCCG 1 cut(s) 412
CseI GACGC 2 cut(s) 457, 806
Csp6I GTAC 3 cut(s) 580, 623, 1318
CspI CGGWCCG 1 cut(s) 412
CviQI GTAC 3 cut(s) 580, 623, 1318
DdeI CTNAG 3 cut(s) 368, 865, 926
DpnI GATC 6 cut(s) 90, 441, 609, 615, 924, 993
DpnII GATC 6 cut(s) 88, 439, 607, 613, 922, 991
Eco130I CCWWGG 1 cut(s) 443
Eco32I GATATC 2 cut(s) 115, 1188
Eco47I GGWCC 4 cut(s) 412, 997, 1156, 1457
Eco57I CTGAAG 4 cut(s) 141, 227, 1407, 1482
EcoO109I RGGNCCY 1 cut(s) 1457
EcoRI GAATTC 1 cut(s) 337
EcoRV GATATC 2 cut(s) 115, 1188
EcoT14I CCWWGG 1 cut(s) 443
ErhI CCWWGG 1 cut(s) 443
Esp3I CGTCTC 1 cut(s) 824
FalI AAGNNNNNCTT 4 cut(s) 54, 86, 945, 977
FauI CCCGC 1 cut(s) 1286
FblI GTMKAC 1 cut(s) 1359
Fnu4HI GCNGC 5 cut(s) 729, 810, 831, 1367, 1476
FokI GGATG 8 cut(s) 318, 343, 812, 839, 987, 1211, 1262, 1355
Fsp4HI GCNGC 5 cut(s) 729, 810, 831, 1367, 1476
FspBI CTAG 5 cut(s) 137, 234, 276, 776, 1524
GlaI GCGC 1 cut(s) 854
GluI GCNGC 5 cut(s) 729, 810, 831, 1367, 1476
HaeIII GGCC 1 cut(s) 263
HapII CCGG 1 cut(s) 415
HgaI GACGC 2 cut(s) 457, 806
HhaI GCGC 1 cut(s) 855
Hin6I GCGC 1 cut(s) 853
HinP1I GCGC 1 cut(s) 853
HincII GTYRAC 1 cut(s) 1111
HindII GTYRAC 1 cut(s) 1111
HindIII AAGCTT 1 cut(s) 269
HinfI GANTC 5 cut(s) 107, 355, 1211, 1520, 1588
HpaII CCGG 1 cut(s) 415
HphI GGTGA 2 cut(s) 691, 1390
Hpy166II GTNNAC 6 cut(s) 212, 221, 580, 1111, 1258, 1360
Hpy188I TCNGA 7 cut(s) 106, 112, 553, 562, 900, 1048, 1126
Hpy8I GTNNAC 6 cut(s) 212, 221, 580, 1111, 1258, 1360
Hpy99I CGWCG 1 cut(s) 195
HpyAV CCTTC 3 cut(s) 305, 776, 947
HpyCH4III ACNGT 6 cut(s) 143, 209, 424, 557, 638, 656
HpyCH4IV ACGT 1 cut(s) 282
HpyCH4V TGCA 8 cut(s) 23, 569, 728, 812, 906, 916, 1010, 1478
HpyF10VI GCNNNNNNNGC 2 cut(s) 416, 1277
HpyF3I CTNAG 3 cut(s) 368, 865, 926
HpySE526I ACGT 1 cut(s) 282
HspAI GCGC 1 cut(s) 853
Kzo9I GATC 6 cut(s) 88, 439, 607, 613, 922, 991
LguI GCTCTTC 3 cut(s) 60, 246, 1353
Lsp1109I GCAGC 4 cut(s) 740, 796, 1378, 1462
LweI GCATC 3 cut(s) 817, 1240, 1333
MaeI CTAG 5 cut(s) 137, 234, 276, 776, 1524
MaeII ACGT 1 cut(s) 282
MaeIII GTNAC 5 cut(s) 278, 343, 659, 860, 1034
MalI GATC 6 cut(s) 90, 441, 609, 615, 924, 993
MboI GATC 6 cut(s) 88, 439, 607, 613, 922, 991
MflI RGATCY 2 cut(s) 922, 991
MhlI GDGCHC 3 cut(s) 241, 960, 1491
MluCI AATT 9 cut(s) 162, 337, 381, 735, 876, 908, 969, 1119, 1451
MluI ACGCGT 1 cut(s) 449
MlyI GAGTC 2 cut(s) 1529, 1582
MmeI TCCRAC 1 cut(s) 1183
MseI TTAA 5 cut(s) 321, 474, 489, 498, 1338
MslI CAYNNNNRTG 1 cut(s) 285
MspA1I CMGCKG 1 cut(s) 749
MspCI CTTAAG 1 cut(s) 1337
MspI CCGG 1 cut(s) 415
MspR9I CCNGG 1 cut(s) 416
Mva1269I GAATGC 2 cut(s) 474, 1387
MvnI CGCG 4 cut(s) 451, 817, 855, 1208
MwoI GCNNNNNNNGC 2 cut(s) 416, 1277
NciI CCSGG 1 cut(s) 416
NdeII GATC 6 cut(s) 88, 439, 607, 613, 922, 991
NlaIV GGNNCC 2 cut(s) 959, 1458
NmuCI GTSAC 4 cut(s) 278, 343, 659, 1034
NspI RCATGY 1 cut(s) 1315
OliI CACNNNNGTG 1 cut(s) 285
PagI TCATGA 1 cut(s) 1221
PciSI GCTCTTC 3 cut(s) 60, 246, 1353
PcsI WCGNNNNNNNCGW 1 cut(s) 147
PctI GAATGC 2 cut(s) 474, 1387
PfeI GAWTC 3 cut(s) 107, 355, 1211
PflFI GACNNNGTC 1 cut(s) 1040
PkrI GCNGC 5 cut(s) 730, 811, 832, 1368, 1477
PleI GAGTC 2 cut(s) 1528, 1582
PpsI GAGTC 2 cut(s) 1528, 1582
PpuMI RGGWCCY 1 cut(s) 1457
Psp5II RGGWCCY 1 cut(s) 1457
PspN4I GGNNCC 2 cut(s) 959, 1458
PspPI GGNCC 5 cut(s) 262, 412, 997, 1156, 1457
PspPPI RGGWCCY 1 cut(s) 1457
PstNI CAGNNNCTG 1 cut(s) 1271
PsuI RGATCY 2 cut(s) 922, 991
PsyI GACNNNGTC 1 cut(s) 1040
PvuII CAGCTG 1 cut(s) 749
RsaI GTAC 3 cut(s) 581, 624, 1319
RsaNI GTAC 3 cut(s) 580, 623, 1318
RseI CAYNNNNRTG 1 cut(s) 285
Rsr2I CGGWCCG 1 cut(s) 412
RsrII CGGWCCG 1 cut(s) 412
SapI GCTCTTC 3 cut(s) 60, 246, 1353
SaqAI TTAA 5 cut(s) 321, 474, 489, 498, 1338
SatI GCNGC 5 cut(s) 729, 810, 831, 1367, 1476
Sau3AI GATC 6 cut(s) 88, 439, 607, 613, 922, 991
Sau96I GGNCC 5 cut(s) 262, 412, 997, 1156, 1457
SchI GAGTC 2 cut(s) 1529, 1582
ScrFI CCNGG 1 cut(s) 416
SduI GDGCHC 3 cut(s) 241, 960, 1491
SfaNI GCATC 3 cut(s) 817, 1240, 1333
SinI GGWCC 4 cut(s) 412, 997, 1156, 1457
SmiMI CAYNNNNRTG 1 cut(s) 285
SmlI CTYRAG 3 cut(s) 713, 821, 1337
SmoI CTYRAG 3 cut(s) 713, 821, 1337
SpeI ACTAGT 1 cut(s) 275
Sse9I AATT 9 cut(s) 162, 337, 381, 735, 876, 908, 969, 1119, 1451
SsiI CCGC 5 cut(s) 410, 815, 831, 1208, 1293
SspMI CTAG 5 cut(s) 137, 234, 276, 776, 1524
StyD4I CCNGG 1 cut(s) 414
StyI CCWWGG 1 cut(s) 443
TaaI ACNGT 6 cut(s) 143, 209, 424, 557, 638, 656
TaiI ACGT 1 cut(s) 285
TaqI TCGA 5 cut(s) 335, 512, 610, 616, 670
TasI AATT 9 cut(s) 162, 337, 381, 735, 876, 908, 969, 1119, 1451
TatI WGTACW 2 cut(s) 579, 622
TauI GCSGC 1 cut(s) 833
TfiI GAWTC 3 cut(s) 107, 355, 1211
Tru1I TTAA 5 cut(s) 321, 474, 489, 498, 1338
Tru9I TTAA 5 cut(s) 321, 474, 489, 498, 1338
TscAI CASTG 1 cut(s) 934
TseFI GTSAC 4 cut(s) 278, 343, 659, 1034
TseI GCWGC 4 cut(s) 728, 809, 1366, 1475
Tsp45I GTSAC 4 cut(s) 278, 343, 659, 1034
TspDTI ATGAA 7 cut(s) 173, 713, 758, 1093, 1210, 1215, 1238
TspGWI ACGGA 2 cut(s) 1177, 1180
TspRI CASTG 1 cut(s) 934
Tth111I GACNNNGTC 1 cut(s) 1040
Vha464I CTTAAG 1 cut(s) 1337
VpaK11BI GGWCC 4 cut(s) 412, 997, 1156, 1457
XapI RAATTY 1 cut(s) 337
XceI RCATGY 1 cut(s) 1315
XmiI GTMKAC 1 cut(s) 1359
XspI CTAG 5 cut(s) 137, 234, 276, 776, 1524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.