Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000033.1

Orthogroup ID

OG0001382

Physical Location & Seq

Genomic Coordinates Forward (+)

72615 .. 78154

Gene Structure 5540 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000033.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

atgaccgggttaactgctaacgtggcaatggggtctagtgttgacgtgacagtggggtccagtgctgacgtggcacatgctgctgattgtgctgcctcctcccctttttttttcttctcttttctgcctgttttctgcagaaggttcattcggctggttcactcacttttaggcaggtttttgtggcttttcttcgggttcctaaatcgtcagattgagtgtttgtctgttgacaaaatttggttgaaattggatgtccggaagatggtgaaccgctggaatatttggtacgggttgtatcgagattccggtggccggttcggtaggtttccgacaagtttttgggttggcgcagccggttctgtactcttgggatcgagtgcttcaagtcgggttcttttcactttgtcgtctcagctgctcctaaaccctaattccgctccttctgtgtctgctctttcttcttctgtttgtttgatggaggaggttgaaagctctatgtccaagtacctggagtatttggattacgatgacgaagcagtagaaggcttcttccctatcaattgtaggcgtcccaatgctcatggaggccttcatcgcccgaataactcaacccttcagcctctctctaatcgctaccagaaattctcagcccgaatccgagcttcgcctttagaggagtgggaaggcaggttgaatattggcatgtccaacaatgtgacaacttccattcgagagtttatccgagagatggccatcggtagaaccaaaactaccgatagagcggatcgtgctactgttgagaaggtcttcgatttcagaaccaagttcattatatacaagttgatgggccgtgatgtatgcaaagaaataaatggctgcatttccactgggaaagaagcaaatgtttatcatgcaaccaattctgatggccaggaacgggcaatcaaagtgttcaaaacatctgttctggactttaaggacagggatagatatgtacaaggggacttccgattcagacgcggatactgcaagaacaatcccaggaaaatgatgaaaacatgggctgagaaagaaatgaggaatctgaagaggataaaagatgctggaatcagatgccctactgcgcatcatataaatcatcatgtactggtcatggatttcataggaaaggcagggtgggcagcacctcttctgaacgatgctgcactatcattagacaagctacgagaaggttatagggagataataattgccatgcgaatgttatatcagaaggccaagctggtgcatacagacctcagtgaattcaacatactttactttgaggggcacctgtacattattgatgtttctcaagcagttgacctttttcacaccaatgcaaatgaattcctacgtcaagattgtgtccatgtttctgatttctttaaaaaacatggggtagcagttatgacaactagggagctctttgattttatagttgatccaagtattgctgaggaagcagtggacagttatctggatgaggtacaacaaaaaattgtggacagaggagatatatctgctgtggatgaaattgctgaatctgtatttgtacaggcatacattccaagtacactaaaccaggtaatggatgttgaagcagatgtactacggctaactagtggtgaggacactgaagacatgtactataaaactattacaggactaagccaggctctttctagtgtcccaccatctccatgtgaaactgaatcagactctgggagtgatgaagaaaactcaattgattcgcattcctcatctggagtcaaagcacaagaacctcttggtaaaaaagttgctagaaaagaaaacaagaagaaagtcaaagaagagaagagggaagctcggaaacacaaattgccaaaggctgtaaagaagagaagaaaaaagttgtccacaggcggaaagtcacggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030490 GO:0030684 GO:0030688 GO:0031323 GO:0031325 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0034708 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090070 GO:0090304 GO:1901360 GO:1902494 GO:1990234 GO:1990904 GO:2000232 GO:2000234

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

RIO1

Protein Analysis

654

Amino Acids

74.01

Weight (kDa)

8.93

Isoelectric Point (pI)

35.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24990 AT5G37350 AT5G37350
fragaria_vesca	FvH4_5g08310 FvH4_5g08310 FvH4_5g08310 FvH4_5g16770 FvH4_5g16770 FvH4_5g16770 FvH4_5g25261
malus_domestica	MD06G1142000.v1.1 MD14G1157300.v1.1
prunus_persica	Prupe.5G151200_v2.0.a1
pyrus_communis	pycom06g13180 pycom14g13080
rosa_chinensis	RchiOBHm_Chr5g0020401 RchiOBHm_Chr5g0063241 RchiOBHm_Chr5g0063291 RchiOBHm_Chr7g0190211
rosa_laevigata	RLG00000004553 RLG00000032520 RLG00000035614 RLG00000035619
rosa_multiflora	Rmu_sc0000033.1_g000014 Rmu_sc0004886.1_g000019 Rmu_sc0005045.1_g000016
rosa_roxburghii	Rroxscaffold_1G00017410 Rroxscaffold_1G00017420 Rroxscaffold_1G00017470 Rroxscaffold_3G00264780
rosa_rugosa	Rorug05G0058900 Rorug05G0058900 Rorug05G0059000 Rorug05G0059100 Rorug05G0355500 Rorug06G0503000
rosa_samantha	Rh5AG149600 Rh5AG415200 Rh5AG415300 Rh5AG415500 Rh5BG149000 Rh5BG430400 Rh5CG160500 Rh5CG453800 Rh5DG147800 Rh5DG444000 Rh7AG108300 Rh7BG110900 Rh7CG113300 Rh7DG111700
rosa_wichuraiana	Rw5G013250 Rw5G039050 Rw7G009390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	55
Acc16I	TGCGCA	1 cut(s)	1128
Acc36I	ACCTGC	2 cut(s)	165, 681
AccB1I	GGYRCC	1 cut(s)	1332
AccB7I	CCANNNNNTGG	1 cut(s)	1633
AccBSI	CCGCTC	2 cut(s)	440, 785
AccII	CGCG	1 cut(s)	1023
AccIII	TCCGGA	1 cut(s)	258
AciI	CCGC	5 cut(s)	274, 438, 785, 1023, 1950
AclWI	GGATC	3 cut(s)	382, 795, 1481
AcoI	YGGCCR	3 cut(s)	313, 753, 931
AcsI	RAATTY	4 cut(s)	237, 644, 1307, 1391
AcuI	CTGAAG	3 cut(s)	602, 1109, 1701
AcyI	GRCGYC	1 cut(s)	571
AfiI	CCNNNNNNNGG	5 cut(s)	265, 315, 751, 940, 1633
AflIII	ACRYGT	1 cut(s)	1686
AgsI	TTSAA	7 cut(s)	247, 387, 491, 697, 958, 1312, 1643
AhlI	ACTAGT	1 cut(s)	1664
AjiI	CACGTC	2 cut(s)	46, 70
AjnI	CCWGG	5 cut(s)	510, 933, 1043, 1626, 1716
AluBI	AGCT	7 cut(s)	418, 495, 665, 1225, 1285, 1468, 1892
AluI	AGCT	7 cut(s)	418, 495, 665, 1225, 1285, 1468, 1892
Alw21I	GWGCWC	1 cut(s)	1470
Alw26I	GTCTC	1 cut(s)	417
AlwI	GGATC	3 cut(s)	382, 795, 1481
AlwNI	CAGNNNCTG	1 cut(s)	1766
Aor13HI	TCCGGA	1 cut(s)	258
AoxI	GGCC	6 cut(s)	313, 589, 753, 850, 931, 1278
ApeKI	GCWGC	7 cut(s)	80, 92, 353, 418, 879, 1184, 1205
ApoI	RAATTY	4 cut(s)	237, 644, 1307, 1391
Asp700I	GAANNNNTTC	1 cut(s)	809
AspLEI	GCGC	2 cut(s)	353, 1129
AspS9I	GGNCC	2 cut(s)	57, 850
AsuC2I	CCSGG	1 cut(s)	7
AsuHPI	GGTGA	2 cut(s)	280, 1682
AvaII	GGWCC	1 cut(s)	57
BaeGI	GKGCMC	1 cut(s)	1335
BalI	TGGCCA	2 cut(s)	755, 933
BanI	GGYRCC	1 cut(s)	1332
BanII	GRGCYC	1 cut(s)	1470
BarI	GAAGNNNNNNTAC	2 cut(s)	1635, 1667
BbsI	GAAGAC	2 cut(s)	802, 1689
Bbv12I	GWGCWC	1 cut(s)	1470
BbvCI	CCTCAGC	1 cut(s)	1500
BbvI	GCAGC	7 cut(s)	67, 79, 365, 405, 866, 1192, 1196
BccI	CCATC	7 cut(s)	259, 472, 745, 764, 841, 923, 1747
BceAI	ACGGC	2 cut(s)	837, 1673
BciT130I	CCWGG	5 cut(s)	512, 935, 1045, 1628, 1718
BciVI	GTATCC	1 cut(s)	1019
BcnI	CCSGG	1 cut(s)	7
BcoDI	GTCTC	1 cut(s)	417
BcuI	ACTAGT	1 cut(s)	1664
BfaI	CTAG	5 cut(s)	36, 1461, 1665, 1728, 1848
BfmI	CTRYAG	1 cut(s)	136
BfuAI	ACCTGC	2 cut(s)	165, 681
BfuI	GTATCC	1 cut(s)	1019
BisI	GCNGC	7 cut(s)	81, 93, 354, 419, 880, 1185, 1206
BlsI	GCNGC	7 cut(s)	82, 94, 355, 420, 881, 1186, 1207
Bme1390I	CCNGG	6 cut(s)	7, 512, 935, 1045, 1628, 1718
Bme18I	GGWCC	1 cut(s)	57
BmgBI	CACGTC	2 cut(s)	46, 70
BmgT120I	GGNCC	2 cut(s)	57, 850
BmiI	GGNNCC	3 cut(s)	58, 200, 1334
BmrFI	CCNGG	6 cut(s)	7, 512, 935, 1045, 1628, 1718
BmrI	ACTGGG	1 cut(s)	900
BmsI	GCATC	4 cut(s)	1093, 1106, 1138, 1192
BmuI	ACTGGG	1 cut(s)	900
BpiI	GAAGAC	2 cut(s)	802, 1689
BplI	GAGNNNNNCTC	2 cut(s)	1876, 1908
BpmI	CTGGAG	2 cut(s)	533, 1830
Bpu10I	CCTNAGC	1 cut(s)	1500
BpuEI	CTTGAG	1 cut(s)	1341
BpuMI	CCSGG	1 cut(s)	7
BsaBI	GATNNNNATC	1 cut(s)	755
BsaHI	GRCGYC	1 cut(s)	571
BsaJI	CCNNGG	1 cut(s)	1043
BsaWI	WCCGGW	2 cut(s)	258, 308
Bsc4I	CCNNNNNNNGG	5 cut(s)	265, 315, 751, 940, 1633
Bse118I	RCCGGY	2 cut(s)	315, 356
Bse1I	ACTGG	3 cut(s)	60, 895, 1155
Bse3DI	GCAATG	1 cut(s)	33
Bse8I	GATNNNNATC	1 cut(s)	755
BseAI	TCCGGA	1 cut(s)	258
BseBI	CCWGG	5 cut(s)	512, 935, 1045, 1628, 1718
BseDI	CCNNGG	1 cut(s)	1043
BseGI	GGATG	4 cut(s)	259, 1531, 1579, 1642
BseJI	GATNNNNATC	1 cut(s)	755
BseLI	CCNNNNNNNGG	5 cut(s)	265, 315, 751, 940, 1633
BseMI	GCAATG	1 cut(s)	33
BseMII	CTCAG	5 cut(s)	428, 663, 1059, 1315, 1491
BseNI	ACTGG	3 cut(s)	60, 895, 1155
BseRI	GAGGAG	4 cut(s)	88, 497, 692, 1569
BseSI	GKGCMC	1 cut(s)	1335
BseXI	GCAGC	7 cut(s)	67, 79, 365, 405, 866, 1192, 1196
BsgI	GTGCAG	1 cut(s)	1191
Bsh1236I	CGCG	1 cut(s)	1023
BshFI	GGCC	6 cut(s)	315, 591, 755, 852, 933, 1280
BshNI	GGYRCC	1 cut(s)	1332
BsiHKAI	GWGCWC	1 cut(s)	1470
BsiSI	CCGG	5 cut(s)	6, 259, 309, 316, 357
BslFI	GGGAC	3 cut(s)	558, 1019, 1718
BslI	CCNNNNNNNGG	5 cut(s)	265, 315, 751, 940, 1633
BsmAI	GTCTC	1 cut(s)	417
BsmBI	CGTCTC	1 cut(s)	417
BsmFI	GGGAC	3 cut(s)	558, 1019, 1718
BsmI	GAATGC	1 cut(s)	1798
BsnI	GGCC	6 cut(s)	315, 591, 755, 852, 933, 1280
Bsp1286I	GDGCHC	2 cut(s)	1335, 1470
Bsp13I	TCCGGA	1 cut(s)	258
Bsp1407I	TGTACA	3 cut(s)	997, 1338, 1597
Bsp143I	GATC	3 cut(s)	374, 787, 1486
BspACI	CCGC	5 cut(s)	274, 438, 785, 1023, 1950
BspANI	GGCC	6 cut(s)	315, 591, 755, 852, 933, 1280
BspCNI	CTCAG	5 cut(s)	427, 662, 1060, 1314, 1492
BspEI	TCCGGA	1 cut(s)	258
BspFNI	CGCG	1 cut(s)	1023
BspLI	GGNNCC	3 cut(s)	58, 200, 1334
BspMAI	CTGCAG	1 cut(s)	140
BspMI	ACCTGC	2 cut(s)	165, 681
BspPI	GGATC	3 cut(s)	382, 795, 1481
BspT107I	GGYRCC	1 cut(s)	1332
BsrBI	CCGCTC	2 cut(s)	440, 785
BsrDI	GCAATG	1 cut(s)	33
BsrFI	RCCGGY	2 cut(s)	315, 356
BsrGI	TGTACA	3 cut(s)	997, 1338, 1597
BsrI	ACTGG	3 cut(s)	60, 895, 1155
BssAI	RCCGGY	2 cut(s)	315, 356
BssECI	CCNNGG	1 cut(s)	1043
BssMI	GATC	3 cut(s)	374, 787, 1486
BssNI	GRCGYC	1 cut(s)	571
Bst2UI	CCWGG	5 cut(s)	512, 935, 1045, 1628, 1718
Bst4CI	ACNGT	4 cut(s)	52, 799, 1517, 1962
Bst6I	CTCTTC	5 cut(s)	1085, 1197, 1872, 1877, 1919
BstACI	GRCGYC	1 cut(s)	571
BstAPI	GCANNNNNTGC	1 cut(s)	80
BstAUI	TGTACA	3 cut(s)	997, 1338, 1597
BstDEI	CTNAG	6 cut(s)	414, 649, 1068, 1301, 1500, 1712
BstF5I	GGATG	4 cut(s)	259, 1531, 1579, 1642
BstFNI	CGCG	1 cut(s)	1023
BstHHI	GCGC	2 cut(s)	353, 1129
BstKTI	GATC	3 cut(s)	377, 790, 1489
BstMAI	GTCTC	1 cut(s)	417
BstMBI	GATC	3 cut(s)	374, 787, 1486
BstMWI	GCNNNNNNNGC	9 cut(s)	23, 71, 80, 89, 597, 791, 1029, 1181, 1505
BstNI	CCWGG	5 cut(s)	512, 935, 1045, 1628, 1718
BstNSI	RCATGY	3 cut(s)	80, 709, 1690
BstSCI	CCNGG	6 cut(s)	5, 510, 933, 1043, 1626, 1716
BstSFI	CTRYAG	1 cut(s)	136
BstSLI	GKGCMC	1 cut(s)	1335
BstUI	CGCG	1 cut(s)	1023
BstV1I	GCAGC	7 cut(s)	67, 79, 365, 405, 866, 1192, 1196
BstV2I	GAAGAC	2 cut(s)	802, 1689
BstXI	CCANNNNNNTGG	1 cut(s)	511
BsuI	GTATCC	1 cut(s)	1019
BsuRI	GGCC	6 cut(s)	315, 591, 755, 852, 933, 1280
BtgZI	GCGATG	1 cut(s)	581
BtrI	CACGTC	2 cut(s)	46, 70
BtsCI	GGATG	4 cut(s)	259, 1531, 1579, 1642
BtsI	GCAGTG	1 cut(s)	1515
BtsIMutI	CAGTG	6 cut(s)	57, 67, 888, 1309, 1515, 1677
BveI	ACCTGC	2 cut(s)	165, 681
CaiI	CAGNNNCTG	1 cut(s)	1766
CfoI	GCGC	2 cut(s)	353, 1129
Cfr10I	RCCGGY	2 cut(s)	315, 356
Cfr13I	GGNCC	2 cut(s)	57, 850
CseI	GACGC	2 cut(s)	560, 1029
CsiI	ACCWGGT	1 cut(s)	1626
DdeI	CTNAG	6 cut(s)	414, 649, 1068, 1301, 1500, 1712
DpnI	GATC	3 cut(s)	376, 789, 1488
DpnII	GATC	3 cut(s)	374, 787, 1486
DraI	TTTAAA	1 cut(s)	1432
DrdI	GACNNNNNNGTC	1 cut(s)	55
DseDI	GACNNNNNNGTC	1 cut(s)	55
EaeI	YGGCCR	3 cut(s)	313, 753, 931
Eam1104I	CTCTTC	5 cut(s)	1085, 1197, 1872, 1877, 1919
EarI	CTCTTC	5 cut(s)	1085, 1197, 1872, 1877, 1919
EciI	GGCGGA	1 cut(s)	1965
Ecl136II	GAGCTC	1 cut(s)	1468
Eco147I	AGGCCT	1 cut(s)	591
Eco24I	GRGCYC	1 cut(s)	1470
Eco47I	GGWCC	1 cut(s)	57
Eco53kI	GAGCTC	1 cut(s)	1468
Eco57I	CTGAAG	3 cut(s)	602, 1109, 1701
EcoICRI	GAGCTC	1 cut(s)	1468
EcoRI	GAATTC	2 cut(s)	1307, 1391
EcoRII	CCWGG	5 cut(s)	510, 933, 1043, 1626, 1716
EcoT38I	GRGCYC	1 cut(s)	1470
Esp3I	CGTCTC	1 cut(s)	417
FalI	AAGNNNNNCTT	2 cut(s)	1815, 1847
FaqI	GGGAC	3 cut(s)	558, 1019, 1718
Fnu4HI	GCNGC	7 cut(s)	81, 93, 354, 419, 880, 1185, 1206
FokI	GGATG	4 cut(s)	266, 1538, 1586, 1649
FriOI	GRGCYC	1 cut(s)	1470
Fsp4HI	GCNGC	7 cut(s)	81, 93, 354, 419, 880, 1185, 1206
FspBI	CTAG	5 cut(s)	36, 1461, 1665, 1728, 1848
FspI	TGCGCA	1 cut(s)	1128
GlaI	GCGC	2 cut(s)	352, 1128
GluI	GCNGC	7 cut(s)	81, 93, 354, 419, 880, 1185, 1206
GsuI	CTGGAG	2 cut(s)	533, 1830
HaeIII	GGCC	6 cut(s)	315, 591, 755, 852, 933, 1280
HapII	CCGG	5 cut(s)	6, 259, 309, 316, 357
HgaI	GACGC	2 cut(s)	560, 1029
HhaI	GCGC	2 cut(s)	353, 1129
Hin1I	GRCGYC	1 cut(s)	571
Hin6I	GCGC	2 cut(s)	351, 1127
HinP1I	GCGC	2 cut(s)	351, 1127
HincII	GTYRAC	4 cut(s)	12, 43, 232, 1366
HindII	GTYRAC	4 cut(s)	12, 43, 232, 1366
HpaI	GTTAAC	1 cut(s)	12
HpaII	CCGG	5 cut(s)	6, 259, 309, 316, 357
HphI	GGTGA	2 cut(s)	280, 1682
Hpy188III	TCNNGA	7 cut(s)	259, 302, 734, 971, 1403, 1523, 1809
HpyAV	CCTTC	9 cut(s)	135, 453, 539, 602, 626, 680, 799, 1226, 1270
HpyCH4III	ACNGT	4 cut(s)	52, 799, 1517, 1962
HpyCH4IV	ACGT	4 cut(s)	21, 45, 69, 1399
HpyCH4V	TGCA	8 cut(s)	138, 864, 882, 917, 1032, 1208, 1291, 1385
HpyF10VI	GCNNNNNNNGC	9 cut(s)	23, 71, 80, 89, 597, 791, 1029, 1181, 1505
HpyF3I	CTNAG	6 cut(s)	414, 649, 1068, 1301, 1500, 1712
HpySE526I	ACGT	4 cut(s)	21, 45, 69, 1399
Hsp92I	GRCGYC	1 cut(s)	571
HspAI	GCGC	2 cut(s)	351, 1127
Kpn2I	TCCGGA	1 cut(s)	258
KspAI	GTTAAC	1 cut(s)	12
Kzo9I	GATC	3 cut(s)	374, 787, 1486
LmnI	GCTCC	3 cut(s)	426, 445, 1465
Lsp1109I	GCAGC	7 cut(s)	67, 79, 365, 405, 866, 1192, 1196
LweI	GCATC	4 cut(s)	1093, 1106, 1138, 1192
MabI	ACCWGGT	1 cut(s)	1626
MaeI	CTAG	5 cut(s)	36, 1461, 1665, 1728, 1848
MaeII	ACGT	4 cut(s)	21, 45, 69, 1399
MaeIII	GTNAC	3 cut(s)	46, 718, 1956
MalI	GATC	3 cut(s)	376, 789, 1488
MbiI	CCGCTC	2 cut(s)	440, 785
MboI	GATC	3 cut(s)	374, 787, 1486
MfeI	CAATTG	2 cut(s)	562, 1788
MhlI	GDGCHC	2 cut(s)	1335, 1470
MlsI	TGGCCA	2 cut(s)	755, 933
MluNI	TGGCCA	2 cut(s)	755, 933
MlyI	GAGTC	2 cut(s)	1757, 1821
MmeI	TCCRAC	2 cut(s)	356, 735
Mox20I	TGGCCA	2 cut(s)	755, 933
MroI	TCCGGA	1 cut(s)	258
MroXI	GAANNNNTTC	1 cut(s)	809
MscI	TGGCCA	2 cut(s)	755, 933
MseI	TTAA	3 cut(s)	11, 978, 1431
MslI	CAYNNNNRTG	3 cut(s)	1262, 1380, 1744
Msp20I	TGGCCA	2 cut(s)	755, 933
MspA1I	CMGCKG	2 cut(s)	276, 418
MspI	CCGG	5 cut(s)	6, 259, 309, 316, 357
MspR9I	CCNGG	6 cut(s)	7, 512, 935, 1045, 1628, 1718
MunI	CAATTG	2 cut(s)	562, 1788
Mva1269I	GAATGC	1 cut(s)	1798
MvaI	CCWGG	5 cut(s)	512, 935, 1045, 1628, 1718
MvnI	CGCG	1 cut(s)	1023
MwoI	GCNNNNNNNGC	9 cut(s)	23, 71, 80, 89, 597, 791, 1029, 1181, 1505
NciI	CCSGG	1 cut(s)	7
NdeII	GATC	3 cut(s)	374, 787, 1486
NlaIV	GGNNCC	3 cut(s)	58, 200, 1334
NmuCI	GTSAC	3 cut(s)	46, 718, 1956
NsbI	TGCGCA	1 cut(s)	1128
NspI	RCATGY	3 cut(s)	80, 709, 1690
PceI	AGGCCT	1 cut(s)	591
PciI	ACATGT	1 cut(s)	1686
PctI	GAATGC	1 cut(s)	1798
PdmI	GAANNNNTTC	1 cut(s)	809
PfeI	GAWTC	8 cut(s)	305, 657, 1014, 1084, 1110, 1586, 1757, 1793
PflMI	CCANNNNNTGG	1 cut(s)	1633
PkrI	GCNGC	7 cut(s)	82, 94, 355, 420, 881, 1186, 1207
PleI	GAGTC	2 cut(s)	1757, 1820
PpsI	GAGTC	2 cut(s)	1757, 1820
PscI	ACATGT	1 cut(s)	1686
Psp124BI	GAGCTC	1 cut(s)	1470
Psp6I	CCWGG	5 cut(s)	510, 933, 1043, 1626, 1716
PspGI	CCWGG	5 cut(s)	510, 933, 1043, 1626, 1716
PspN4I	GGNNCC	3 cut(s)	58, 200, 1334
PspPI	GGNCC	2 cut(s)	57, 850
PsrI	GAACNNNNNNTAC	2 cut(s)	757, 789
PstI	CTGCAG	1 cut(s)	140
PstNI	CAGNNNCTG	1 cut(s)	1766
PvuII	CAGCTG	1 cut(s)	418
RseI	CAYNNNNRTG	3 cut(s)	1262, 1380, 1744
SacI	GAGCTC	1 cut(s)	1470
SaqAI	TTAA	3 cut(s)	11, 978, 1431
SatI	GCNGC	7 cut(s)	81, 93, 354, 419, 880, 1185, 1206
Sau3AI	GATC	3 cut(s)	374, 787, 1486
Sau96I	GGNCC	2 cut(s)	57, 850
SchI	GAGTC	2 cut(s)	1757, 1821
ScrFI	CCNGG	6 cut(s)	7, 512, 935, 1045, 1628, 1718
SduI	GDGCHC	2 cut(s)	1335, 1470
SexAI	ACCWGGT	1 cut(s)	1626
SfaNI	GCATC	4 cut(s)	1093, 1106, 1138, 1192
SfcI	CTRYAG	1 cut(s)	136
SinI	GGWCC	1 cut(s)	57
SmiMI	CAYNNNNRTG	3 cut(s)	1262, 1380, 1744
SmlI	CTYRAG	1 cut(s)	1356
SmoI	CTYRAG	1 cut(s)	1356
SpeI	ACTAGT	1 cut(s)	1664
SseBI	AGGCCT	1 cut(s)	591
SsiI	CCGC	5 cut(s)	274, 438, 785, 1023, 1950
SspI	AATATT	2 cut(s)	283, 700
SspMI	CTAG	5 cut(s)	36, 1461, 1665, 1728, 1848
SstI	GAGCTC	1 cut(s)	1470
StuI	AGGCCT	1 cut(s)	591
StyD4I	CCNGG	6 cut(s)	5, 510, 933, 1043, 1626, 1716
TaaI	ACNGT	4 cut(s)	52, 799, 1517, 1962
TaiI	ACGT	4 cut(s)	24, 48, 72, 1402
TaqI	TCGA	4 cut(s)	301, 377, 733, 813
TatI	WGTACW	8 cut(s)	364, 997, 1147, 1338, 1597, 1616, 1651, 1689
TfiI	GAWTC	8 cut(s)	305, 657, 1014, 1084, 1110, 1586, 1757, 1793
Tru1I	TTAA	3 cut(s)	11, 978, 1431
Tru9I	TTAA	3 cut(s)	11, 978, 1431
TscAI	CASTG	6 cut(s)	57, 67, 895, 1309, 1515, 1684
TseFI	GTSAC	3 cut(s)	46, 718, 1956
TseI	GCWGC	7 cut(s)	80, 92, 353, 418, 879, 1184, 1205
Tsp45I	GTSAC	3 cut(s)	46, 718, 1956
TspDTI	ATGAA	8 cut(s)	136, 584, 820, 1070, 1153, 1404, 1590, 1791
TspRI	CASTG	6 cut(s)	57, 67, 895, 1309, 1515, 1684
Van91I	CCANNNNNTGG	1 cut(s)	1633
VpaK11BI	GGWCC	1 cut(s)	57
XapI	RAATTY	4 cut(s)	237, 644, 1307, 1391
XceI	RCATGY	3 cut(s)	80, 709, 1690
XcmI	CCANNNNNNNNNTGG	1 cut(s)	67
XmnI	GAANNNNTTC	1 cut(s)	809
XspI	CTAG	5 cut(s)	36, 1461, 1665, 1728, 1848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.