Rh5BG149000

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
15224171 .. 15227590
3420 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG149000.1

Sequence Viewer

Length: 1488 bp
ATGGAGGAGGTTGAAAGCTCCATGTCCAAGTACTTGGAGTATTTGGATTACGATGACGAAGCAGTAGAAGGTTTTTTCCCAATCAATTGTAGGCGTCCCAATGCTCATGGAGGCCTTCATCGTCCTAATAACTCAACCCTTCAGCCTCTCTCTAATCGCTACCAGAAGTTCTCTACCCGAATCCGAGCTTCGCCTTTAGAGGAGTGGGAAGGCAGGTTGAATATTGGCATGTCCAACAATGTGACAACTTCCATTCGAGAGTTTATTAGGGAGACAGCCATCGGTAGAACCAAAACTACCGATAGAGCGGATCGTGCTACTGTTGAGAAGGTCTTCGATTTCAGAACCAAGTTCATTATATACAAATTGATGGGGCGTGATATATGCAAAGAAATAAATGGTTGCATTTCCACTGGGAAAGAAGCAAATGTTTATCATGCAACCAATTCTGATGGCCAGGAACGGGCAATCAAAGTGTTCAAAACATCTGTTCTGGATTTTAAGGACAGGGATAGATATGTACAAGGGGACTTCCGATTCAGACGCGGATACTGCAAGAACAATCCGAGGAAAATGATGAAGACATGGGCTGAGAAAGAAATGAGGAATCTGAAGAGGATAAAAGATGCAGGAATCAGATGCCCTACTGCACATCATATAAATCATCATGTACTGGTCATGGATTTCATAGGGAAAGCAGGGTGGGCAGCACCTCTTCTGAACGATGCGGCACTATCATTAGATAAGCTACGAGAAGGTTATAGGGAGATAATAATTGCCATGCGAATGTTATATCAGAAGGCCAAGCTGGTGCATACAGACCTCAGTGAATTCAACATACTTTACTTTGAGGGGCACCTGTACATTATTGATGTTTCTCAAGCAGTTGACCTTTTCCACTCTAATGCAAATGAATTCCTACGTCAAGATTGTGTCCATGTTTCTGATTTCTTTAAAAAACGTGGTGTAGCAGTTATGACAACTAGGGAGCTCTTTGATTTTATAGTTGATCCAAGTATTGCTGAGGAAGCAGTGGACAGTTATCTGGATGAGGTGCAACAAAATATTGCAGACAGAGGAGATATATCTACGGTGGATGAAATTGCTGAATCTGTATTTGTGCAGGCATTCATTCCAAATACACTAAACCAGGTTATAAATGTTGAAGCAGATGTACTACGGTTAACTAGTGGTGAGGACACTGAAGATATGTACTATAAAACTATTACAGGACTAAGGCAGGCTCTTTCTAGTGTCCCACCATCTCCATGTGAGACCGAATCAGACTCTGGTAGTGATGAAGAAAACTCAATTGATTCACATTCCTCATCTGGAATCAAGGCACAGGAACCTCTTGGTAAAAAAGTCGCTAGAAAAGAAAACAAGAAGAAAGTCAAAGAAGAGAAGAAGGAAGCTCGGAAACACAAATTGCCTAAGGCTGTAAAGAAAAGAAGAAAAAAGTTGTCCAAAGGCGGAAAGTCTCGGTAG

Protein Analysis

495

Amino Acids

56.67

Weight (kDa)

8.79

Isoelectric Point (pI)

32.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RIO1 PF01163 143 - 330 3.7e-68 RIO domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1157
Acc36I ACCTGC 1 cut(s) 204
AccB1I GGYRCC 1 cut(s) 855
AccBSI CCGCTC 1 cut(s) 308
AccII CGCG 1 cut(s) 546
AciI CCGC 4 cut(s) 308, 546, 728, 1473
AclWI GGATC 2 cut(s) 318, 1004
AcoI YGGCCR 1 cut(s) 454
AcsI RAATTY 2 cut(s) 830, 914
AcuI CTGAAG 3 cut(s) 125, 632, 1224
AcyI GRCGYC 1 cut(s) 94
AfaI GTAC 6 cut(s) 32, 522, 672, 863, 1176, 1214
AfiI CCNNNNNNNGG 1 cut(s) 463
AgsI TTSAA 5 cut(s) 14, 220, 481, 835, 1166
AhlI ACTAGT 1 cut(s) 1187
AjnI CCWGG 2 cut(s) 456, 1149
AluBI AGCT 6 cut(s) 18, 188, 748, 808, 991, 1415
AluI AGCT 6 cut(s) 18, 188, 748, 808, 991, 1415
Alw21I GWGCWC 1 cut(s) 993
Alw26I GTCTC 2 cut(s) 266, 1268
AlwI GGATC 2 cut(s) 318, 1004
AlwNI CAGNNNCTG 1 cut(s) 1289
AoxI GGCC 3 cut(s) 112, 454, 801
ApeKI GCWGC 1 cut(s) 707
ApoI RAATTY 2 cut(s) 830, 914
Asp700I GAANNNNTTC 1 cut(s) 332
AsuHPI GGTGA 1 cut(s) 1205
AxyI CCTNAGG 1 cut(s) 1434
BaeGI GKGCMC 1 cut(s) 858
BalI TGGCCA 1 cut(s) 456
BanI GGYRCC 1 cut(s) 855
BanII GRGCYC 1 cut(s) 993
BarI GAAGNNNNNNTAC 2 cut(s) 1158, 1190
BbsI GAAGAC 2 cut(s) 325, 587
Bbv12I GWGCWC 1 cut(s) 993
BbvCI CCTCAGC 1 cut(s) 1023
BbvI GCAGC 1 cut(s) 719
BccI CCATC 4 cut(s) 287, 364, 446, 1270
BciT130I CCWGG 2 cut(s) 458, 1151
BciVI GTATCC 1 cut(s) 542
BcoDI GTCTC 2 cut(s) 266, 1268
BcuI ACTAGT 1 cut(s) 1187
BfaI CTAG 4 cut(s) 984, 1188, 1251, 1371
BfuAI ACCTGC 1 cut(s) 204
BfuI GTATCC 1 cut(s) 542
BisI GCNGC 2 cut(s) 708, 729
BlsI GCNGC 2 cut(s) 709, 730
BmcAI AGTACT 1 cut(s) 32
Bme1390I CCNGG 2 cut(s) 458, 1151
BmiI GGNNCC 2 cut(s) 857, 1350
BmrFI CCNGG 2 cut(s) 458, 1151
BmrI ACTGGG 1 cut(s) 423
BmsI GCATC 3 cut(s) 616, 629, 715
BmuI ACTGGG 1 cut(s) 423
BpiI GAAGAC 2 cut(s) 325, 587
Bpu10I CCTNAGC 1 cut(s) 1023
BpuEI CTTGAG 1 cut(s) 864
BsaHI GRCGYC 1 cut(s) 94
BsaI GGTCTC 1 cut(s) 1268
BsaJI CCNNGG 1 cut(s) 566
Bsc4I CCNNNNNNNGG 1 cut(s) 463
Bse1I ACTGG 2 cut(s) 418, 678
Bse21I CCTNAGG 1 cut(s) 1434
BseBI CCWGG 2 cut(s) 458, 1151
BseDI CCNNGG 1 cut(s) 566
BseGI GGATG 2 cut(s) 1054, 1102
BseLI CCNNNNNNNGG 1 cut(s) 463
BseMII CTCAG 3 cut(s) 582, 838, 1014
BseNI ACTGG 2 cut(s) 418, 678
BseRI GAGGAG 3 cut(s) 20, 215, 1092
BseSI GKGCMC 1 cut(s) 858
BseXI GCAGC 1 cut(s) 719
BsgI GTGCAG 2 cut(s) 633, 1142
Bsh1236I CGCG 1 cut(s) 546
BshFI GGCC 3 cut(s) 114, 456, 803
BshNI GGYRCC 1 cut(s) 855
BsiHKAI GWGCWC 1 cut(s) 993
BslFI GGGAC 3 cut(s) 81, 542, 1241
BslI CCNNNNNNNGG 1 cut(s) 463
BsmAI GTCTC 2 cut(s) 266, 1268
BsmFI GGGAC 3 cut(s) 81, 542, 1241
BsmI GAATGC 1 cut(s) 1127
BsnI GGCC 3 cut(s) 114, 456, 803
Bso31I GGTCTC 1 cut(s) 1268
Bsp1286I GDGCHC 2 cut(s) 858, 993
Bsp1407I TGTACA 2 cut(s) 520, 861
Bsp143I GATC 2 cut(s) 310, 1009
BspACI CCGC 4 cut(s) 308, 546, 728, 1473
BspANI GGCC 3 cut(s) 114, 456, 803
BspCNI CTCAG 3 cut(s) 583, 837, 1015
BspFNI CGCG 1 cut(s) 546
BspLI GGNNCC 2 cut(s) 857, 1350
BspMI ACCTGC 1 cut(s) 204
BspPI GGATC 2 cut(s) 318, 1004
BspT107I GGYRCC 1 cut(s) 855
BspTNI GGTCTC 1 cut(s) 1268
BsrBI CCGCTC 1 cut(s) 308
BsrGI TGTACA 2 cut(s) 520, 861
BsrI ACTGG 2 cut(s) 418, 678
BssECI CCNNGG 1 cut(s) 566
BssMI GATC 2 cut(s) 310, 1009
BssNI GRCGYC 1 cut(s) 94
Bst2UI CCWGG 2 cut(s) 458, 1151
Bst4CI ACNGT 4 cut(s) 322, 1040, 1093, 1182
Bst6I CTCTTC 3 cut(s) 608, 720, 1395
BstACI GRCGYC 1 cut(s) 94
BstAUI TGTACA 2 cut(s) 520, 861
BstC8I GCNNGC 2 cut(s) 1125, 1242
BstDEI CTNAG 5 cut(s) 591, 824, 1023, 1235, 1434
BstF5I GGATG 2 cut(s) 1054, 1102
BstFNI CGCG 1 cut(s) 546
BstKTI GATC 2 cut(s) 313, 1012
BstMAI GTCTC 2 cut(s) 266, 1268
BstMBI GATC 2 cut(s) 310, 1009
BstMWI GCNNNNNNNGC 4 cut(s) 314, 552, 704, 1028
BstNI CCWGG 2 cut(s) 458, 1151
BstNSI RCATGY 1 cut(s) 232
BstSCI CCNGG 2 cut(s) 456, 1149
BstSLI GKGCMC 1 cut(s) 858
BstUI CGCG 1 cut(s) 546
BstV1I GCAGC 1 cut(s) 719
BstV2I GAAGAC 2 cut(s) 325, 587
BstXI CCANNNNNNTGG 1 cut(s) 34
Bsu36I CCTNAGG 1 cut(s) 1434
BsuI GTATCC 1 cut(s) 542
BsuRI GGCC 3 cut(s) 114, 456, 803
BtsCI GGATG 2 cut(s) 1054, 1102
BtsI GCAGTG 1 cut(s) 1038
BtsIMutI CAGTG 4 cut(s) 411, 832, 1038, 1200
BveI ACCTGC 1 cut(s) 204
Cac8I GCNNGC 2 cut(s) 1125, 1242
CaiI CAGNNNCTG 1 cut(s) 1289
CseI GACGC 2 cut(s) 83, 552
CsiI ACCWGGT 1 cut(s) 1149
Csp6I GTAC 6 cut(s) 31, 521, 671, 862, 1175, 1213
CviQI GTAC 6 cut(s) 31, 521, 671, 862, 1175, 1213
DdeI CTNAG 5 cut(s) 591, 824, 1023, 1235, 1434
DpnI GATC 2 cut(s) 312, 1011
DpnII GATC 2 cut(s) 310, 1009
DraI TTTAAA 1 cut(s) 955
EaeI YGGCCR 1 cut(s) 454
Eam1104I CTCTTC 3 cut(s) 608, 720, 1395
EarI CTCTTC 3 cut(s) 608, 720, 1395
EciI GGCGGA 1 cut(s) 1488
Ecl136II GAGCTC 1 cut(s) 991
Eco147I AGGCCT 1 cut(s) 114
Eco24I GRGCYC 1 cut(s) 993
Eco31I GGTCTC 1 cut(s) 1268
Eco53kI GAGCTC 1 cut(s) 991
Eco57I CTGAAG 3 cut(s) 125, 632, 1224
Eco81I CCTNAGG 1 cut(s) 1434
EcoICRI GAGCTC 1 cut(s) 991
EcoRI GAATTC 2 cut(s) 830, 914
EcoRII CCWGG 2 cut(s) 456, 1149
EcoT38I GRGCYC 1 cut(s) 993
FaqI GGGAC 3 cut(s) 81, 542, 1241
Fnu4HI GCNGC 2 cut(s) 708, 729
FokI GGATG 2 cut(s) 1061, 1109
FriOI GRGCYC 1 cut(s) 993
Fsp4HI GCNGC 2 cut(s) 708, 729
FspBI CTAG 4 cut(s) 984, 1188, 1251, 1371
GluI GCNGC 2 cut(s) 708, 729
HaeIII GGCC 3 cut(s) 114, 456, 803
HgaI GACGC 2 cut(s) 83, 552
Hin1I GRCGYC 1 cut(s) 94
HincII GTYRAC 2 cut(s) 889, 1185
HindII GTYRAC 2 cut(s) 889, 1185
HinfI GANTC 9 cut(s) 180, 537, 607, 633, 1109, 1280, 1286, 1316, 1335
HpaI GTTAAC 1 cut(s) 1185
HphI GGTGA 1 cut(s) 1205
Hpy166II GTNNAC 3 cut(s) 889, 1036, 1185
Hpy188III TCNNGA 5 cut(s) 257, 494, 926, 1046, 1332
Hpy8I GTNNAC 3 cut(s) 889, 1036, 1185
HpyAV CCTTC 8 cut(s) 62, 125, 149, 203, 322, 749, 793, 1402
HpyCH4III ACNGT 4 cut(s) 322, 1040, 1093, 1182
HpyCH4IV ACGT 2 cut(s) 922, 961
HpyF10VI GCNNNNNNNGC 4 cut(s) 314, 552, 704, 1028
HpyF3I CTNAG 5 cut(s) 591, 824, 1023, 1235, 1434
HpySE526I ACGT 2 cut(s) 922, 961
Hsp92I GRCGYC 1 cut(s) 94
KspAI GTTAAC 1 cut(s) 1185
Kzo9I GATC 2 cut(s) 310, 1009
LmnI GCTCC 2 cut(s) 23, 988
Lsp1109I GCAGC 1 cut(s) 719
LweI GCATC 3 cut(s) 616, 629, 715
MabI ACCWGGT 1 cut(s) 1149
MaeI CTAG 4 cut(s) 984, 1188, 1251, 1371
MaeII ACGT 2 cut(s) 922, 961
MaeIII GTNAC 1 cut(s) 241
MalI GATC 2 cut(s) 312, 1011
MbiI CCGCTC 1 cut(s) 308
MboI GATC 2 cut(s) 310, 1009
MfeI CAATTG 2 cut(s) 85, 1311
MhlI GDGCHC 2 cut(s) 858, 993
MlsI TGGCCA 1 cut(s) 456
MluCI AATT 9 cut(s) 85, 365, 445, 774, 830, 914, 1101, 1311, 1427
MluNI TGGCCA 1 cut(s) 456
MlyI GAGTC 1 cut(s) 1280
MmeI TCCRAC 1 cut(s) 258
Mox20I TGGCCA 1 cut(s) 456
MroXI GAANNNNTTC 1 cut(s) 332
MscI TGGCCA 1 cut(s) 456
MseI TTAA 3 cut(s) 501, 954, 1184
MslI CAYNNNNRTG 3 cut(s) 785, 903, 1267
Msp20I TGGCCA 1 cut(s) 456
MspR9I CCNGG 2 cut(s) 458, 1151
MunI CAATTG 2 cut(s) 85, 1311
Mva1269I GAATGC 1 cut(s) 1127
MvaI CCWGG 2 cut(s) 458, 1151
MvnI CGCG 1 cut(s) 546
MwoI GCNNNNNNNGC 4 cut(s) 314, 552, 704, 1028
NdeII GATC 2 cut(s) 310, 1009
NlaIV GGNNCC 2 cut(s) 857, 1350
NmuCI GTSAC 1 cut(s) 241
NspI RCATGY 1 cut(s) 232
PceI AGGCCT 1 cut(s) 114
PctI GAATGC 1 cut(s) 1127
PdmI GAANNNNTTC 1 cut(s) 332
PfeI GAWTC 8 cut(s) 180, 537, 607, 633, 1109, 1280, 1316, 1335
PkrI GCNGC 2 cut(s) 709, 730
PleI GAGTC 1 cut(s) 1280
PpsI GAGTC 1 cut(s) 1280
PsiI TTATAA 1 cut(s) 1157
Psp124BI GAGCTC 1 cut(s) 993
Psp6I CCWGG 2 cut(s) 456, 1149
PspGI CCWGG 2 cut(s) 456, 1149
PspN4I GGNNCC 2 cut(s) 857, 1350
PsrI GAACNNNNNNTAC 2 cut(s) 280, 312
PstNI CAGNNNCTG 1 cut(s) 1289
RsaI GTAC 6 cut(s) 32, 522, 672, 863, 1176, 1214
RsaNI GTAC 6 cut(s) 31, 521, 671, 862, 1175, 1213
RseI CAYNNNNRTG 3 cut(s) 785, 903, 1267
SacI GAGCTC 1 cut(s) 993
SaqAI TTAA 3 cut(s) 501, 954, 1184
SatI GCNGC 2 cut(s) 708, 729
Sau3AI GATC 2 cut(s) 310, 1009
ScaI AGTACT 1 cut(s) 32
SchI GAGTC 1 cut(s) 1280
ScrFI CCNGG 2 cut(s) 458, 1151
SduI GDGCHC 2 cut(s) 858, 993
SexAI ACCWGGT 1 cut(s) 1149
SfaNI GCATC 3 cut(s) 616, 629, 715
SmiMI CAYNNNNRTG 3 cut(s) 785, 903, 1267
SmlI CTYRAG 1 cut(s) 879
SmoI CTYRAG 1 cut(s) 879
SpeI ACTAGT 1 cut(s) 1187
Sse9I AATT 9 cut(s) 85, 365, 445, 774, 830, 914, 1101, 1311, 1427
SseBI AGGCCT 1 cut(s) 114
SsiI CCGC 4 cut(s) 308, 546, 728, 1473
SspI AATATT 2 cut(s) 223, 1066
SspMI CTAG 4 cut(s) 984, 1188, 1251, 1371
SstI GAGCTC 1 cut(s) 993
StuI AGGCCT 1 cut(s) 114
StyD4I CCNGG 2 cut(s) 456, 1149
TaaI ACNGT 4 cut(s) 322, 1040, 1093, 1182
TaiI ACGT 2 cut(s) 925, 964
TaqI TCGA 2 cut(s) 256, 336
TaqII GACCGA 1 cut(s) 1292
TasI AATT 9 cut(s) 85, 365, 445, 774, 830, 914, 1101, 1311, 1427
TatI WGTACW 6 cut(s) 30, 520, 670, 861, 1174, 1212
TauI GCSGC 1 cut(s) 731
TfiI GAWTC 8 cut(s) 180, 537, 607, 633, 1109, 1280, 1316, 1335
Tru1I TTAA 3 cut(s) 501, 954, 1184
Tru9I TTAA 3 cut(s) 501, 954, 1184
TscAI CASTG 4 cut(s) 418, 832, 1038, 1207
TseFI GTSAC 1 cut(s) 241
TseI GCWGC 1 cut(s) 707
Tsp45I GTSAC 1 cut(s) 241
TspDTI ATGAA 8 cut(s) 107, 343, 593, 676, 927, 1113, 1120, 1314
TspRI CASTG 4 cut(s) 418, 832, 1038, 1207
XapI RAATTY 2 cut(s) 830, 914
XceI RCATGY 1 cut(s) 232
XmnI GAANNNNTTC 1 cut(s) 332
XspI CTAG 4 cut(s) 984, 1188, 1251, 1371
ZrmI AGTACT 1 cut(s) 32
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.