Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0001382

Physical Location & Seq

Genomic Coordinates Forward (+)

8363785 .. 8367195

Gene Structure 3411 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG110900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

ATGGCTGCCGTTGAAGAAACAAAATCAGAGAAAGAGACTGAAGTGATTGCTCCTGAAGCCGAAGAAGTAGTAGAAGAGGATGAGGAAGAGGACTGGTCATCGGACTCCGACATCGGAGATGCATTGGACTATTTGGATTCCAAGGACGACGACGCAGTTGAAGGCGCCTTCACTATCAATTCGCGGCGCCCAAATGCCCATGGAGGCCTTCACTCTCGCCCTAACTCCTCTACTCTTCAGCCTCTCTCTAATCGCAACCAGAGGTTCTCCACTCACATCCGAGCTTCGCCGTTAGAGGAGTGGGAAGGGAGGCATGTTGGGATGTCCAACTCTGTGACGACTGCGATTAGGGAAAGTGTTCGGGACATGGCCACTGGAAGAACAAAGACTACTGAGAAGGCGGATCGTGCCACTGTTGAGCAGGCTATTGATCCTAGAACTCGGATGGTGTTATTCAAAATGCTGAATCGCGGTGTGTTTAAGGATATCAATGGCTGCATTTCTACTGGGAAAGAAGCAAATGTTTATCATGCAACAAAAGCTGATGGCGGGGAACTGGCAATCAAAGTCTTCAAAACCTCTATTCTTGTTTTTAAGCTAAAGGCTGAAGGAATTAGGTGCCCAGAAGTAGGTCCTCTAAGACTTCATGTTCTGGTGATGGAATTCATAGGTAAGGATGGTTGGGCAGCGCCACGCCTAAAGGATGCTGCATTATCACTTGACAAGCTACGAGAAGGTTATATGGAGATGGTTATTGCTATGCGAACATTATATCAGAAGTGCAAACTGGTGCATGGAGATCTCAGTGAATACAACATACTTTATTTTGAGGGCCACTTGTATATCATTGATGTTTCTCAATCAGTTGATCTCGACCACCCTCATGCCCTTGATTTCCTACGTGAAGATTGTGTCCATGTATCCGATTTCTTTAAAAAACATGGTGTAGCTGTCATGACAATTCGAGAGCTCTTTGACTTTATAGTGGATCCATGTATTGCTGATGATGATATAGACAGTTATCTGGAGAAGGTACAACAAAAAATCATGGCAAGAGGAGATATGACAGCAGAGGAGGAAATTGCAGATGCTGTATTTGTGCAGTCATACATTCCAAAGACGCTAGATAACGTGAAGAATGCTGAGGCGGACGTAATACGATTAACCAGTGGTGAGGACACTGGAGACATGTACTATAAAACTATTACAGGATTAAAGGAGGCTCTTCCAAATGGCCAACCAGCTCCACCTGAGAAAGATCAGGAACATGATGGTAATGCCCCAGAAGAGTCCTTGGTCGATCCGGTTGGTGGTCCTGAAGCTCATGAGACCGAGTCTGACTCTGGTACAGATGAAGAAAGCTCAAGTGACTCAGAAGGGAATTCCCCATCAAAATCCAAGGCACAGGATCCTCTTGATAAGAAAGCTGCTAGAAAAGAGAACAAGAAGAAAGTGAAAGAAGAGAAGAGGGAAGCTCGGAAGACTAAAGTGCCGAAGGCTGATAAGAAGAGAAAGAAAAAGATGGCCAAAGCCCACAAGACTAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030490 GO:0030684 GO:0030688 GO:0031323 GO:0031325 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0034708 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090070 GO:0090304 GO:1901360 GO:1902494 GO:1990234 GO:1990904 GO:2000232 GO:2000234

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

RIO1

Protein Analysis

515

Amino Acids

57.48

Weight (kDa)

5.23

Isoelectric Point (pI)

39.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RIO1	PF01163	199 - 323	4.8e-44	RIO domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24990 AT5G37350 AT5G37350
fragaria_vesca	FvH4_5g08310 FvH4_5g08310 FvH4_5g08310 FvH4_5g16770 FvH4_5g16770 FvH4_5g16770 FvH4_5g25261
malus_domestica	MD06G1142000.v1.1 MD14G1157300.v1.1
prunus_persica	Prupe.5G151200_v2.0.a1
pyrus_communis	pycom06g13180 pycom14g13080
rosa_chinensis	RchiOBHm_Chr5g0020401 RchiOBHm_Chr5g0063241 RchiOBHm_Chr5g0063291 RchiOBHm_Chr7g0190211
rosa_laevigata	RLG00000004553 RLG00000032520 RLG00000035614 RLG00000035619
rosa_multiflora	Rmu_sc0000033.1_g000014 Rmu_sc0004886.1_g000019 Rmu_sc0005045.1_g000016
rosa_roxburghii	Rroxscaffold_1G00017410 Rroxscaffold_1G00017420 Rroxscaffold_1G00017470 Rroxscaffold_3G00264780
rosa_rugosa	Rorug05G0058900 Rorug05G0058900 Rorug05G0059000 Rorug05G0059100 Rorug05G0355500 Rorug06G0503000
rosa_samantha	Rh5AG149600 Rh5AG415200 Rh5AG415300 Rh5AG415500 Rh5BG149000 Rh5BG430400 Rh5CG160500 Rh5CG453800 Rh5DG147800 Rh5DG444000 Rh7AG108300 Rh7BG110900 Rh7CG113300 Rh7DG111700
rosa_wichuraiana	Rw5G013250 Rw5G039050 Rw7G009390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	164, 186, 618
AccII	CGCG	2 cut(s)	184, 471
AciI	CCGC	5 cut(s)	184, 401, 471, 549, 1148
AclWI	GGATC	7 cut(s)	411, 425, 983, 996, 1295, 1403, 1416
AcoI	YGGCCR	3 cut(s)	369, 1234, 1524
AcsI	RAATTY	2 cut(s)	662, 1381
AcuI	CTGAAG	5 cut(s)	60, 75, 221, 627, 1338
AcyI	GRCGYC	2 cut(s)	165, 187
AfaI	GTAC	3 cut(s)	1035, 1193, 1348
AfiI	CCNNNNNNNGG	2 cut(s)	629, 1310
AflIII	ACRYGT	1 cut(s)	1188
AgsI	TTSAA	4 cut(s)	14, 161, 457, 574
Alw21I	GWGCWC	1 cut(s)	972
Alw26I	GTCTC	3 cut(s)	29, 1179, 1322
AlwI	GGATC	7 cut(s)	411, 425, 983, 996, 1295, 1403, 1416
AlwNI	CAGNNNCTG	1 cut(s)	1091
AoxI	GGCC	5 cut(s)	205, 369, 832, 1234, 1524
ApeKI	GCWGC	5 cut(s)	5, 495, 686, 707, 1427
ApoI	RAATTY	2 cut(s)	662, 1381
Asp700I	GAANNNNTTC	1 cut(s)	357
AspLEI	GCGC	3 cut(s)	167, 189, 691
AspS9I	GGNCC	3 cut(s)	632, 832, 1313
AsuHPI	GGTGA	2 cut(s)	667, 1184
AvaII	GGWCC	2 cut(s)	632, 1313
BaeGI	GKGCMC	1 cut(s)	623
BalI	TGGCCA	3 cut(s)	371, 1236, 1526
BamHI	GGATCC	2 cut(s)	988, 1408
BanI	GGYRCC	3 cut(s)	164, 186, 618
BanII	GRGCYC	1 cut(s)	972
BbsI	GAAGAC	2 cut(s)	562, 1487
Bbv12I	GWGCWC	1 cut(s)	972
BbvCI	CCTCAGC	1 cut(s)	1143
BbvI	GCAGC	4 cut(s)	482, 694, 698, 1414
BccI	CCATC	8 cut(s)	439, 539, 652, 671, 742, 1265, 1396, 1516
BceAI	ACGGC	1 cut(s)	274
BciVI	GTATCC	1 cut(s)	931
BcoDI	GTCTC	3 cut(s)	29, 1179, 1322
BfaI	CTAG	4 cut(s)	435, 1124, 1431, 1542
BfoI	RGCGCY	3 cut(s)	168, 190, 692
BfuI	GTATCC	1 cut(s)	931
BglII	AGATCT	1 cut(s)	799
BisI	GCNGC	6 cut(s)	6, 185, 496, 687, 708, 1428
BlsI	GCNGC	6 cut(s)	7, 186, 497, 688, 709, 1429
Bme18I	GGWCC	2 cut(s)	632, 1313
BmgT120I	GGNCC	3 cut(s)	632, 832, 1313
BmiI	GGNNCC	5 cut(s)	166, 188, 620, 990, 1410
BmrI	ACTGGG	1 cut(s)	516
BmsI	GCATC	3 cut(s)	109, 694, 1078
BmuI	ACTGGG	1 cut(s)	516
BpiI	GAAGAC	2 cut(s)	562, 1487
BplI	GAGNNNNNCTC	4 cut(s)	1325, 1357, 1459, 1491
BpmI	CTGGAG	2 cut(s)	1046, 1203
Bpu10I	CCTNAGC	1 cut(s)	1143
BpuEI	CTTGAG	1 cut(s)	1348
BsaAI	YACGTR	1 cut(s)	902
BsaHI	GRCGYC	2 cut(s)	165, 187
BsaI	GGTCTC	1 cut(s)	1322
BsaJI	CCNNGG	4 cut(s)	141, 199, 1293, 1398
BsaWI	WCCGGW	1 cut(s)	1303
Bsc4I	CCNNNNNNNGG	2 cut(s)	629, 1310
Bse1I	ACTGG	7 cut(s)	98, 379, 511, 561, 792, 1167, 1186
BseDI	CCNNGG	4 cut(s)	141, 199, 1293, 1398
BseGI	GGATG	6 cut(s)	85, 276, 327, 450, 682, 709
BseLI	CCNNNNNNNGG	2 cut(s)	629, 1310
BseMII	CTCAG	5 cut(s)	384, 817, 1134, 1242, 1386
BseNI	ACTGG	7 cut(s)	98, 379, 511, 561, 792, 1167, 1186
BseRI	GAGGAG	4 cut(s)	217, 311, 1071, 1088
BseSI	GKGCMC	1 cut(s)	623
BseXI	GCAGC	4 cut(s)	482, 694, 698, 1414
BsgI	GTGCAG	1 cut(s)	1121
Bsh1236I	CGCG	2 cut(s)	184, 471
BshFI	GGCC	5 cut(s)	207, 371, 834, 1236, 1526
BshNI	GGYRCC	3 cut(s)	164, 186, 618
BsiHKAI	GWGCWC	1 cut(s)	972
BsiSI	CCGG	1 cut(s)	1304
BslFI	GGGAC	1 cut(s)	377
BslI	CCNNNNNNNGG	2 cut(s)	629, 1310
BsmAI	GTCTC	3 cut(s)	29, 1179, 1322
BsmFI	GGGAC	1 cut(s)	377
BsmI	GAATGC	1 cut(s)	1144
BsnI	GGCC	5 cut(s)	207, 371, 834, 1236, 1526
Bso31I	GGTCTC	1 cut(s)	1322
Bsp1286I	GDGCHC	2 cut(s)	623, 972
Bsp143I	GATC	8 cut(s)	403, 430, 799, 868, 988, 1258, 1300, 1408
Bsp19I	CCATGG	1 cut(s)	199
BspACI	CCGC	5 cut(s)	184, 401, 471, 549, 1148
BspANI	GGCC	5 cut(s)	207, 371, 834, 1236, 1526
BspCNI	CTCAG	5 cut(s)	385, 816, 1135, 1243, 1385
BspFNI	CGCG	2 cut(s)	184, 471
BspHI	TCATGA	2 cut(s)	954, 1324
BspLI	GGNNCC	5 cut(s)	166, 188, 620, 990, 1410
BspPI	GGATC	7 cut(s)	411, 425, 983, 996, 1295, 1403, 1416
BspQI	GCTCTTC	1 cut(s)	1230
BspT107I	GGYRCC	3 cut(s)	164, 186, 618
BspTNI	GGTCTC	1 cut(s)	1322
BsrI	ACTGG	7 cut(s)	98, 379, 511, 561, 792, 1167, 1186
BssECI	CCNNGG	4 cut(s)	141, 199, 1293, 1398
BssMI	GATC	8 cut(s)	403, 430, 799, 868, 988, 1258, 1300, 1408
BssNI	GRCGYC	2 cut(s)	165, 187
BssT1I	CCWWGG	4 cut(s)	141, 199, 1293, 1398
Bst4CI	ACNGT	2 cut(s)	415, 1019
Bst6I	CTCTTC	8 cut(s)	69, 81, 240, 1230, 1281, 1455, 1460, 1502
BstACI	GRCGYC	2 cut(s)	165, 187
BstBAI	YACGTR	1 cut(s)	902
BstC8I	GCNNGC	1 cut(s)	423
BstDEI	CTNAG	6 cut(s)	393, 638, 803, 1143, 1251, 1372
BstDSI	CCRYGG	1 cut(s)	199
BstF5I	GGATG	6 cut(s)	85, 276, 327, 450, 682, 709
BstFNI	CGCG	2 cut(s)	184, 471
BstH2I	RGCGCY	3 cut(s)	168, 190, 692
BstHHI	GCGC	3 cut(s)	167, 189, 691
BstKTI	GATC	8 cut(s)	406, 433, 802, 871, 991, 1261, 1303, 1411
BstMAI	GTCTC	3 cut(s)	29, 1179, 1322
BstMBI	GATC	8 cut(s)	403, 430, 799, 868, 988, 1258, 1300, 1408
BstMWI	GCNNNNNNNGC	3 cut(s)	56, 407, 539
BstNSI	RCATGY	2 cut(s)	317, 1192
BstSLI	GKGCMC	1 cut(s)	623
BstUI	CGCG	2 cut(s)	184, 471
BstV1I	GCAGC	4 cut(s)	482, 694, 698, 1414
BstV2I	GAAGAC	2 cut(s)	562, 1487
BstX2I	RGATCY	3 cut(s)	799, 988, 1408
BstYI	RGATCY	3 cut(s)	799, 988, 1408
BsuI	GTATCC	1 cut(s)	931
BsuRI	GGCC	5 cut(s)	207, 371, 834, 1236, 1526
BtgI	CCRYGG	1 cut(s)	199
BtsCI	GGATG	6 cut(s)	85, 276, 327, 450, 682, 709
BtsIMutI	CAGTG	5 cut(s)	372, 411, 811, 1174, 1179
Cac8I	GCNNGC	1 cut(s)	423
CaiI	CAGNNNCTG	1 cut(s)	1091
CciI	TCATGA	2 cut(s)	954, 1324
CfoI	GCGC	3 cut(s)	167, 189, 691
Cfr13I	GGNCC	3 cut(s)	632, 832, 1313
CseI	GACGC	2 cut(s)	161, 1129
Csp6I	GTAC	3 cut(s)	1034, 1192, 1347
CviQI	GTAC	3 cut(s)	1034, 1192, 1347
DdeI	CTNAG	6 cut(s)	393, 638, 803, 1143, 1251, 1372
DinI	GGCGCC	2 cut(s)	166, 188
DpnI	GATC	8 cut(s)	405, 432, 801, 870, 990, 1260, 1302, 1410
DpnII	GATC	8 cut(s)	403, 430, 799, 868, 988, 1258, 1300, 1408
DraI	TTTAAA	1 cut(s)	934
EaeI	YGGCCR	3 cut(s)	369, 1234, 1524
Eam1104I	CTCTTC	8 cut(s)	69, 81, 240, 1230, 1281, 1455, 1460, 1502
EarI	CTCTTC	8 cut(s)	69, 81, 240, 1230, 1281, 1455, 1460, 1502
EciI	GGCGGA	2 cut(s)	416, 1163
Ecl136II	GAGCTC	1 cut(s)	970
Eco130I	CCWWGG	4 cut(s)	141, 199, 1293, 1398
Eco147I	AGGCCT	1 cut(s)	207
Eco24I	GRGCYC	1 cut(s)	972
Eco31I	GGTCTC	1 cut(s)	1322
Eco32I	GATATC	1 cut(s)	487
Eco47I	GGWCC	2 cut(s)	632, 1313
Eco53kI	GAGCTC	1 cut(s)	970
Eco57I	CTGAAG	5 cut(s)	60, 75, 221, 627, 1338
EcoICRI	GAGCTC	1 cut(s)	970
EcoO109I	RGGNCCY	1 cut(s)	632
EcoRI	GAATTC	2 cut(s)	662, 1381
EcoRV	GATATC	1 cut(s)	487
EcoT14I	CCWWGG	4 cut(s)	141, 199, 1293, 1398
EcoT22I	ATGCAT	1 cut(s)	124
EcoT38I	GRGCYC	1 cut(s)	972
EgeI	GGCGCC	2 cut(s)	166, 188
EheI	GGCGCC	2 cut(s)	166, 188
ErhI	CCWWGG	4 cut(s)	141, 199, 1293, 1398
FaqI	GGGAC	1 cut(s)	377
FauI	CCCGC	1 cut(s)	542
Fnu4HI	GCNGC	6 cut(s)	6, 185, 496, 687, 708, 1428
FokI	GGATG	6 cut(s)	92, 263, 334, 457, 689, 716
FriOI	GRGCYC	1 cut(s)	972
Fsp4HI	GCNGC	6 cut(s)	6, 185, 496, 687, 708, 1428
FspBI	CTAG	4 cut(s)	435, 1124, 1431, 1542
GlaI	GCGC	3 cut(s)	166, 188, 690
GluI	GCNGC	6 cut(s)	6, 185, 496, 687, 708, 1428
GsuI	CTGGAG	2 cut(s)	1046, 1203
HaeII	RGCGCY	3 cut(s)	168, 190, 692
HaeIII	GGCC	5 cut(s)	207, 371, 834, 1236, 1526
HapII	CCGG	1 cut(s)	1304
HgaI	GACGC	2 cut(s)	161, 1129
HhaI	GCGC	3 cut(s)	167, 189, 691
Hin1I	GRCGYC	2 cut(s)	165, 187
Hin6I	GCGC	3 cut(s)	165, 187, 689
HinP1I	GCGC	3 cut(s)	165, 187, 689
HinfI	GANTC	7 cut(s)	104, 137, 466, 1289, 1334, 1340, 1370
HpaII	CCGG	1 cut(s)	1304
HphI	GGTGA	2 cut(s)	667, 1184
Hpy99I	CGWCG	2 cut(s)	152, 155
HpyCH4III	ACNGT	2 cut(s)	415, 1019
HpyCH4IV	ACGT	3 cut(s)	901, 1131, 1152
HpyCH4V	TGCA	8 cut(s)	122, 498, 533, 710, 783, 793, 1085, 1102
HpyF10VI	GCNNNNNNNGC	3 cut(s)	56, 407, 539
HpyF3I	CTNAG	6 cut(s)	393, 638, 803, 1143, 1251, 1372
HpySE526I	ACGT	3 cut(s)	901, 1131, 1152
Hsp92I	GRCGYC	2 cut(s)	165, 187
HspAI	GCGC	3 cut(s)	165, 187, 689
KasI	GGCGCC	2 cut(s)	164, 186
Kzo9I	GATC	8 cut(s)	403, 430, 799, 868, 988, 1258, 1300, 1408
LguI	GCTCTTC	1 cut(s)	1230
LmnI	GCTCC	2 cut(s)	55, 1249
Lsp1109I	GCAGC	4 cut(s)	482, 694, 698, 1414
LweI	GCATC	3 cut(s)	109, 694, 1078
MaeI	CTAG	4 cut(s)	435, 1124, 1431, 1542
MaeII	ACGT	3 cut(s)	901, 1131, 1152
MaeIII	GTNAC	2 cut(s)	334, 1367
MalI	GATC	8 cut(s)	405, 432, 801, 870, 990, 1260, 1302, 1410
MboI	GATC	8 cut(s)	403, 430, 799, 868, 988, 1258, 1300, 1408
MflI	RGATCY	3 cut(s)	799, 988, 1408
MhlI	GDGCHC	2 cut(s)	623, 972
MlsI	TGGCCA	3 cut(s)	371, 1236, 1526
MluCI	AATT	6 cut(s)	178, 612, 662, 960, 1080, 1381
MluNI	TGGCCA	3 cut(s)	371, 1236, 1526
Mly113I	GGCGCC	2 cut(s)	165, 187
MlyI	GAGTC	5 cut(s)	98, 1298, 1334, 1343, 1364
MmeI	TCCRAC	2 cut(s)	132, 351
Mox20I	TGGCCA	3 cut(s)	371, 1236, 1526
Mph1103I	ATGCAT	1 cut(s)	124
MroXI	GAANNNNTTC	1 cut(s)	357
MscI	TGGCCA	3 cut(s)	371, 1236, 1526
MseI	TTAA	5 cut(s)	480, 594, 933, 1163, 1214
MslI	CAYNNNNRTG	1 cut(s)	882
Msp20I	TGGCCA	3 cut(s)	371, 1236, 1526
MspI	CCGG	1 cut(s)	1304
Mva1269I	GAATGC	1 cut(s)	1144
MvnI	CGCG	2 cut(s)	184, 471
MwoI	GCNNNNNNNGC	3 cut(s)	56, 407, 539
NarI	GGCGCC	2 cut(s)	165, 187
NcoI	CCATGG	1 cut(s)	199
NdeII	GATC	8 cut(s)	403, 430, 799, 868, 988, 1258, 1300, 1408
NlaIV	GGNNCC	5 cut(s)	166, 188, 620, 990, 1410
NmuCI	GTSAC	2 cut(s)	334, 1367
NsiI	ATGCAT	1 cut(s)	124
NspI	RCATGY	2 cut(s)	317, 1192
PagI	TCATGA	2 cut(s)	954, 1324
PceI	AGGCCT	1 cut(s)	207
PciI	ACATGT	1 cut(s)	1188
PciSI	GCTCTTC	1 cut(s)	1230
PctI	GAATGC	1 cut(s)	1144
PdmI	GAANNNNTTC	1 cut(s)	357
PfeI	GAWTC	2 cut(s)	137, 466
PflFI	GACNNNGTC	1 cut(s)	1333
PkrI	GCNGC	6 cut(s)	7, 186, 497, 688, 709, 1429
PleI	GAGTC	5 cut(s)	98, 1297, 1334, 1342, 1364
PluTI	GGCGCC	2 cut(s)	168, 190
PpsI	GAGTC	5 cut(s)	98, 1297, 1334, 1342, 1364
Ppu21I	YACGTR	1 cut(s)	902
PpuMI	RGGWCCY	1 cut(s)	632
PscI	ACATGT	1 cut(s)	1188
Psp124BI	GAGCTC	1 cut(s)	972
Psp5II	RGGWCCY	1 cut(s)	632
PspN4I	GGNNCC	5 cut(s)	166, 188, 620, 990, 1410
PspPI	GGNCC	3 cut(s)	632, 832, 1313
PspPPI	RGGWCCY	1 cut(s)	632
PsrI	GAACNNNNNNTAC	2 cut(s)	373, 405
PstNI	CAGNNNCTG	1 cut(s)	1091
PsuI	RGATCY	3 cut(s)	799, 988, 1408
PsyI	GACNNNGTC	1 cut(s)	1333
RsaI	GTAC	3 cut(s)	1035, 1193, 1348
RsaNI	GTAC	3 cut(s)	1034, 1192, 1347
RseI	CAYNNNNRTG	1 cut(s)	882
SacI	GAGCTC	1 cut(s)	972
SapI	GCTCTTC	1 cut(s)	1230
SaqAI	TTAA	5 cut(s)	480, 594, 933, 1163, 1214
SatI	GCNGC	6 cut(s)	6, 185, 496, 687, 708, 1428
Sau3AI	GATC	8 cut(s)	403, 430, 799, 868, 988, 1258, 1300, 1408
Sau96I	GGNCC	3 cut(s)	632, 832, 1313
SchI	GAGTC	5 cut(s)	98, 1298, 1334, 1343, 1364
SduI	GDGCHC	2 cut(s)	623, 972
SfaNI	GCATC	3 cut(s)	109, 694, 1078
SfoI	GGCGCC	2 cut(s)	166, 188
SinI	GGWCC	2 cut(s)	632, 1313
SmiMI	CAYNNNNRTG	1 cut(s)	882
SmlI	CTYRAG	1 cut(s)	1363
SmoI	CTYRAG	1 cut(s)	1363
Sse9I	AATT	6 cut(s)	178, 612, 662, 960, 1080, 1381
SseBI	AGGCCT	1 cut(s)	207
SsiI	CCGC	5 cut(s)	184, 401, 471, 549, 1148
SspDI	GGCGCC	2 cut(s)	164, 186
SspMI	CTAG	4 cut(s)	435, 1124, 1431, 1542
SstI	GAGCTC	1 cut(s)	972
StuI	AGGCCT	1 cut(s)	207
StyI	CCWWGG	4 cut(s)	141, 199, 1293, 1398
TaaI	ACNGT	2 cut(s)	415, 1019
TaiI	ACGT	3 cut(s)	904, 1134, 1155
TaqI	TCGA	3 cut(s)	873, 964, 1299
TaqII	GACCGA	1 cut(s)	1346
TasI	AATT	6 cut(s)	178, 612, 662, 960, 1080, 1381
TatI	WGTACW	1 cut(s)	1191
TauI	GCSGC	1 cut(s)	187
TfiI	GAWTC	2 cut(s)	137, 466
Tru1I	TTAA	5 cut(s)	480, 594, 933, 1163, 1214
Tru9I	TTAA	5 cut(s)	480, 594, 933, 1163, 1214
TscAI	CASTG	5 cut(s)	379, 418, 811, 1174, 1186
TseFI	GTSAC	2 cut(s)	334, 1367
TseI	GCWGC	5 cut(s)	5, 495, 686, 707, 1427
Tsp45I	GTSAC	2 cut(s)	334, 1367
TspDTI	ATGAA	3 cut(s)	635, 655, 1368
TspRI	CASTG	5 cut(s)	379, 418, 811, 1174, 1186
Tth111I	GACNNNGTC	1 cut(s)	1333
VpaK11BI	GGWCC	2 cut(s)	632, 1313
XapI	RAATTY	2 cut(s)	662, 1381
XceI	RCATGY	2 cut(s)	317, 1192
XmnI	GAANNNNTTC	1 cut(s)	357
XspI	CTAG	4 cut(s)	435, 1124, 1431, 1542
Zsp2I	ATGCAT	1 cut(s)	124

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.