Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0001382

Physical Location & Seq

Genomic Coordinates Reverse (-)

60224852 .. 60228292

Gene Structure 3441 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004553

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGGCTGCCGTTGAAGAAACAAAATCAGAGAAAGAGACTGAAGTGATTACGCCTGAAGCCGAAGAAGAAGAAGTAGTAGTAGTAGAAGAGGATGAGGAAGAGGACTGGTCATCGGACTCCGACATCGGAGATGCATTGGACTATTTGGATTCCAAGGACGACGACGCAGTTGAAGGCGCCTTCACTATCAATTCGCGGCGCCCAAATGCCCATGGAGGCCTTCACTCTCGCCCTAACTCCTCTACTCTTCAGCCTCTCTCTAATCGCAACCAGAGGTTCTCCACTCACATCCGAGCTTCGCCGTTAGAGGAGTGGGAAGGGAGGCATGTTGGGATGTCCAACTCTGTGACGACTGCGATTAGGGAAAGTGTTCGGGACATGGCCACTGGAAGAACAAAGACTACTGAGAAGGCGGATCGTGCCACTGTTGAGCAGGCTATTGATCCTAGAACTCGGATGGTGTTATTCAAAATGCTGAATCGCGGTGTGTTTAAGGATATCAATGGCTGCATTTCTACTGGGAAAGAAGCAAATGTTTATCATGCAACAAAAGCTGATGGCGGGGAACTGGCAATCAAAGTCTTCAAAACCTCTATTCTTGTTTTTAAGGATAGGGATAGATATGTACAAGGGGACTACAGGTTCAGACATGGATACTGCAAGCACAATCCTAGGAAAATGGTGAAGACATGGGCCGAGAAAGAAAAAAGGAATTTGATCAGGCTAAAGGCTGAAGGAATTAGGTGCCCAGAAGTAGGTCCTCTAAGACTTCATGTTCTGGTGATGGAATTCATAGGTAAGGATGGTTGGGCAGCACCACGCCTAAAGGATGCTGCATTATCACTTGACAAGCTACGAGAAGGTTATATGGAGATGGTTATTGCTATGCGAACATTATATCAGAAGTGCAAACTGGTGCATGGAGATCTCAGTGAATACAACATACTTTATTTTGAGGGCCACTTGTATATCATCGATGTTTCTCAATCAGTTGATCTCGACCACCCTCATGCCCTTGATTTCCTACGTGAAGATTGTGTCCATGTATCCGATTTCTTTAAAAAACATGGTGTAGCTGTCATGACAATTCGAGAGCTCTTTGACTTTATAGTGGATCCATGTATTGCTGATGATGATATAGACAGTTATCTGGAGAAGGTACAACAAAAAATCATGGCAAGAGGAGATATGACAGCAGAGGAGGAAATTGCAGATGCTGTATTTGTGCAGTCATACATTCCAAAGACGCTAGATAACGTGAAGAATGCTGAGGCAGACGTAATACGATTAACCAGTGGTGAGGACACTGGAGACATGTACTATAAAACTATTACAGGATTAAAGGAGGCTCTTCCAAAAGGCCAACCAGCTCCACCTGAGAAAGATCAGGAACATGATGGTAATGCCCCAGAAGAGTCCTTGGTCGATCCGGTTGGTGGTCCTGAAGCTCATGAGACCGAGTCTGACTCTGGTACAGATGAAGAAAGCTCAAGTGACTCAGAAGGGAATTCCCCATCAAAATCCAAGGCACAGGATCCTCTTGATAAGAAAGCTGCTAGAAAAGAGAACAAGAAGAAAGTGAAAGAAGAGAAGAGGGAAGCTCGGAAAACTAAAGTGCCGAAGGCTGATAAGAAGAGAAAGAAAAAGATGGCCAAAGCCCACAAGACTAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030490 GO:0030684 GO:0030688 GO:0031323 GO:0031325 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0034708 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090070 GO:0090304 GO:1901360 GO:1902494 GO:1990234 GO:1990904 GO:2000232 GO:2000234

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

RIO1

Protein Analysis

558

Amino Acids

62.82

Weight (kDa)

5.6

Isoelectric Point (pI)

38.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RIO1	PF01163	178 - 365	3.5e-70	RIO domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24990 AT5G37350 AT5G37350
fragaria_vesca	FvH4_5g08310 FvH4_5g08310 FvH4_5g08310 FvH4_5g16770 FvH4_5g16770 FvH4_5g16770 FvH4_5g25261
malus_domestica	MD06G1142000.v1.1 MD14G1157300.v1.1
prunus_persica	Prupe.5G151200_v2.0.a1
pyrus_communis	pycom06g13180 pycom14g13080
rosa_chinensis	RchiOBHm_Chr5g0020401 RchiOBHm_Chr5g0063241 RchiOBHm_Chr5g0063291 RchiOBHm_Chr7g0190211
rosa_laevigata	RLG00000004553 RLG00000032520 RLG00000035614 RLG00000035619
rosa_multiflora	Rmu_sc0000033.1_g000014 Rmu_sc0004886.1_g000019 Rmu_sc0005045.1_g000016
rosa_roxburghii	Rroxscaffold_1G00017410 Rroxscaffold_1G00017420 Rroxscaffold_1G00017470 Rroxscaffold_3G00264780
rosa_rugosa	Rorug05G0058900 Rorug05G0058900 Rorug05G0059000 Rorug05G0059100 Rorug05G0355500 Rorug06G0503000
rosa_samantha	Rh5AG149600 Rh5AG415200 Rh5AG415300 Rh5AG415500 Rh5BG149000 Rh5BG430400 Rh5CG160500 Rh5CG453800 Rh5DG147800 Rh5DG444000 Rh7AG108300 Rh7BG110900 Rh7CG113300 Rh7DG111700
rosa_wichuraiana	Rw5G013250 Rw5G039050 Rw7G009390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	176, 198, 744
AccII	CGCG	2 cut(s)	196, 483
AciI	CCGC	4 cut(s)	196, 413, 483, 561
AclWI	GGATC	7 cut(s)	423, 437, 1109, 1122, 1421, 1529, 1542
AcoI	YGGCCR	2 cut(s)	381, 1650
AcsI	RAATTY	3 cut(s)	712, 788, 1507
AcuI	CTGAAG	5 cut(s)	60, 75, 233, 753, 1464
AcyI	GRCGYC	2 cut(s)	177, 199
AfaI	GTAC	4 cut(s)	627, 1161, 1319, 1474
AfiI	CCNNNNNNNGG	2 cut(s)	755, 1436
AflIII	ACRYGT	1 cut(s)	1314
AgsI	TTSAA	4 cut(s)	14, 173, 469, 586
AloI	GAACNNNNNNTCC	2 cut(s)	626, 658
Alw21I	GWGCWC	1 cut(s)	1098
Alw26I	GTCTC	3 cut(s)	29, 1305, 1448
AlwI	GGATC	7 cut(s)	423, 437, 1109, 1122, 1421, 1529, 1542
AlwNI	CAGNNNCTG	1 cut(s)	1217
AoxI	GGCC	6 cut(s)	217, 381, 693, 958, 1360, 1650
ApeKI	GCWGC	5 cut(s)	5, 507, 812, 833, 1553
ApoI	RAATTY	3 cut(s)	712, 788, 1507
Asp700I	GAANNNNTTC	1 cut(s)	369
AspA2I	CCTAGG	1 cut(s)	671
AspLEI	GCGC	2 cut(s)	179, 201
AspS9I	GGNCC	4 cut(s)	693, 758, 958, 1439
AsuHPI	GGTGA	3 cut(s)	694, 793, 1310
AvaII	GGWCC	2 cut(s)	758, 1439
AvrII	CCTAGG	1 cut(s)	671
BaeGI	GKGCMC	1 cut(s)	749
BalI	TGGCCA	2 cut(s)	383, 1652
BamHI	GGATCC	2 cut(s)	1114, 1534
BanI	GGYRCC	3 cut(s)	176, 198, 744
BanII	GRGCYC	1 cut(s)	1098
BbsI	GAAGAC	2 cut(s)	574, 692
Bbv12I	GWGCWC	1 cut(s)	1098
BbvCI	CCTCAGC	1 cut(s)	1269
BbvI	GCAGC	4 cut(s)	494, 820, 824, 1540
BccI	CCATC	8 cut(s)	451, 551, 778, 797, 868, 1391, 1522, 1642
BceAI	ACGGC	1 cut(s)	286
BciVI	GTATCC	2 cut(s)	647, 1057
BclI	TGATCA	1 cut(s)	717
BcoDI	GTCTC	3 cut(s)	29, 1305, 1448
BfaI	CTAG	5 cut(s)	447, 672, 1250, 1557, 1668
BfmI	CTRYAG	1 cut(s)	637
BfoI	RGCGCY	2 cut(s)	180, 202
BfuI	GTATCC	2 cut(s)	647, 1057
BglII	AGATCT	1 cut(s)	925
BisI	GCNGC	6 cut(s)	6, 197, 508, 813, 834, 1554
BlnI	CCTAGG	1 cut(s)	671
BlsI	GCNGC	6 cut(s)	7, 198, 509, 814, 835, 1555
Bme18I	GGWCC	2 cut(s)	758, 1439
BmgT120I	GGNCC	4 cut(s)	693, 758, 958, 1439
BmiI	GGNNCC	5 cut(s)	178, 200, 746, 1116, 1536
BmrI	ACTGGG	1 cut(s)	528
BmsI	GCATC	3 cut(s)	121, 820, 1204
BmuI	ACTGGG	1 cut(s)	528
BpiI	GAAGAC	2 cut(s)	574, 692
BplI	GAGNNNNNCTC	4 cut(s)	1451, 1483, 1585, 1617
BpmI	CTGGAG	2 cut(s)	1172, 1329
Bpu10I	CCTNAGC	1 cut(s)	1269
BpuEI	CTTGAG	1 cut(s)	1474
Bsa29I	ATCGAT	1 cut(s)	975
BsaAI	YACGTR	1 cut(s)	1028
BsaHI	GRCGYC	2 cut(s)	177, 199
BsaI	GGTCTC	1 cut(s)	1448
BsaJI	CCNNGG	5 cut(s)	153, 211, 671, 1419, 1524
BsaWI	WCCGGW	1 cut(s)	1429
Bsc4I	CCNNNNNNNGG	2 cut(s)	755, 1436
Bse1I	ACTGG	7 cut(s)	110, 391, 523, 573, 918, 1293, 1312
BseCI	ATCGAT	1 cut(s)	975
BseDI	CCNNGG	5 cut(s)	153, 211, 671, 1419, 1524
BseGI	GGATG	6 cut(s)	97, 288, 339, 462, 808, 835
BseLI	CCNNNNNNNGG	2 cut(s)	755, 1436
BseMII	CTCAG	5 cut(s)	396, 943, 1260, 1368, 1512
BseNI	ACTGG	7 cut(s)	110, 391, 523, 573, 918, 1293, 1312
BseRI	GAGGAG	4 cut(s)	229, 323, 1197, 1214
BseSI	GKGCMC	1 cut(s)	749
BseXI	GCAGC	4 cut(s)	494, 820, 824, 1540
BsgI	GTGCAG	1 cut(s)	1247
Bsh1236I	CGCG	2 cut(s)	196, 483
BshFI	GGCC	6 cut(s)	219, 383, 695, 960, 1362, 1652
BshNI	GGYRCC	3 cut(s)	176, 198, 744
BshVI	ATCGAT	1 cut(s)	975
BsiHKAI	GWGCWC	1 cut(s)	1098
BsiSI	CCGG	1 cut(s)	1430
BslFI	GGGAC	2 cut(s)	389, 647
BslI	CCNNNNNNNGG	2 cut(s)	755, 1436
BsmAI	GTCTC	3 cut(s)	29, 1305, 1448
BsmFI	GGGAC	2 cut(s)	389, 647
BsmI	GAATGC	1 cut(s)	1270
BsnI	GGCC	6 cut(s)	219, 383, 695, 960, 1362, 1652
Bso31I	GGTCTC	1 cut(s)	1448
Bsp1286I	GDGCHC	2 cut(s)	749, 1098
Bsp1407I	TGTACA	1 cut(s)	625
Bsp143I	GATC	9 cut(s)	415, 442, 717, 925, 994, 1114, 1384, 1426, 1534
Bsp19I	CCATGG	1 cut(s)	211
BspACI	CCGC	4 cut(s)	196, 413, 483, 561
BspANI	GGCC	6 cut(s)	219, 383, 695, 960, 1362, 1652
BspCNI	CTCAG	5 cut(s)	397, 942, 1261, 1369, 1511
BspDI	ATCGAT	1 cut(s)	975
BspFNI	CGCG	2 cut(s)	196, 483
BspHI	TCATGA	2 cut(s)	1080, 1450
BspLI	GGNNCC	5 cut(s)	178, 200, 746, 1116, 1536
BspPI	GGATC	7 cut(s)	423, 437, 1109, 1122, 1421, 1529, 1542
BspQI	GCTCTTC	1 cut(s)	1356
BspT107I	GGYRCC	3 cut(s)	176, 198, 744
BspTNI	GGTCTC	1 cut(s)	1448
BsrGI	TGTACA	1 cut(s)	625
BsrI	ACTGG	7 cut(s)	110, 391, 523, 573, 918, 1293, 1312
BssECI	CCNNGG	5 cut(s)	153, 211, 671, 1419, 1524
BssMI	GATC	9 cut(s)	415, 442, 717, 925, 994, 1114, 1384, 1426, 1534
BssNI	GRCGYC	2 cut(s)	177, 199
BssT1I	CCWWGG	5 cut(s)	153, 211, 671, 1419, 1524
Bst4CI	ACNGT	2 cut(s)	427, 1145
Bst6I	CTCTTC	8 cut(s)	81, 93, 252, 1356, 1407, 1581, 1586, 1628
BstACI	GRCGYC	2 cut(s)	177, 199
BstAUI	TGTACA	1 cut(s)	625
BstBAI	YACGTR	1 cut(s)	1028
BstC8I	GCNNGC	2 cut(s)	435, 662
BstDEI	CTNAG	6 cut(s)	405, 764, 929, 1269, 1377, 1498
BstDSI	CCRYGG	1 cut(s)	211
BstF5I	GGATG	6 cut(s)	97, 288, 339, 462, 808, 835
BstFNI	CGCG	2 cut(s)	196, 483
BstH2I	RGCGCY	2 cut(s)	180, 202
BstHHI	GCGC	2 cut(s)	179, 201
BstKTI	GATC	9 cut(s)	418, 445, 720, 928, 997, 1117, 1387, 1429, 1537
BstMAI	GTCTC	3 cut(s)	29, 1305, 1448
BstMBI	GATC	9 cut(s)	415, 442, 717, 925, 994, 1114, 1384, 1426, 1534
BstMWI	GCNNNNNNNGC	2 cut(s)	419, 551
BstNSI	RCATGY	2 cut(s)	329, 1318
BstSFI	CTRYAG	1 cut(s)	637
BstSLI	GKGCMC	1 cut(s)	749
BstUI	CGCG	2 cut(s)	196, 483
BstV1I	GCAGC	4 cut(s)	494, 820, 824, 1540
BstV2I	GAAGAC	2 cut(s)	574, 692
BstX2I	RGATCY	3 cut(s)	925, 1114, 1534
BstYI	RGATCY	3 cut(s)	925, 1114, 1534
Bsu15I	ATCGAT	1 cut(s)	975
BsuI	GTATCC	2 cut(s)	647, 1057
BsuRI	GGCC	6 cut(s)	219, 383, 695, 960, 1362, 1652
BsuTUI	ATCGAT	1 cut(s)	975
BtgI	CCRYGG	1 cut(s)	211
BtsCI	GGATG	6 cut(s)	97, 288, 339, 462, 808, 835
BtsIMutI	CAGTG	5 cut(s)	384, 423, 937, 1300, 1305
Cac8I	GCNNGC	2 cut(s)	435, 662
CaiI	CAGNNNCTG	1 cut(s)	1217
CciI	TCATGA	2 cut(s)	1080, 1450
CfoI	GCGC	2 cut(s)	179, 201
Cfr13I	GGNCC	4 cut(s)	693, 758, 958, 1439
ClaI	ATCGAT	1 cut(s)	975
CseI	GACGC	2 cut(s)	173, 1255
Csp6I	GTAC	4 cut(s)	626, 1160, 1318, 1473
CviQI	GTAC	4 cut(s)	626, 1160, 1318, 1473
DdeI	CTNAG	6 cut(s)	405, 764, 929, 1269, 1377, 1498
DinI	GGCGCC	2 cut(s)	178, 200
DpnI	GATC	9 cut(s)	417, 444, 719, 927, 996, 1116, 1386, 1428, 1536
DpnII	GATC	9 cut(s)	415, 442, 717, 925, 994, 1114, 1384, 1426, 1534
DraI	TTTAAA	1 cut(s)	1060
EaeI	YGGCCR	2 cut(s)	381, 1650
Eam1104I	CTCTTC	8 cut(s)	81, 93, 252, 1356, 1407, 1581, 1586, 1628
EarI	CTCTTC	8 cut(s)	81, 93, 252, 1356, 1407, 1581, 1586, 1628
EciI	GGCGGA	1 cut(s)	428
Ecl136II	GAGCTC	1 cut(s)	1096
Eco130I	CCWWGG	5 cut(s)	153, 211, 671, 1419, 1524
Eco147I	AGGCCT	1 cut(s)	219
Eco24I	GRGCYC	1 cut(s)	1098
Eco31I	GGTCTC	1 cut(s)	1448
Eco32I	GATATC	1 cut(s)	499
Eco47I	GGWCC	2 cut(s)	758, 1439
Eco53kI	GAGCTC	1 cut(s)	1096
Eco57I	CTGAAG	5 cut(s)	60, 75, 233, 753, 1464
EcoICRI	GAGCTC	1 cut(s)	1096
EcoO109I	RGGNCCY	1 cut(s)	758
EcoRI	GAATTC	2 cut(s)	788, 1507
EcoRV	GATATC	1 cut(s)	499
EcoT14I	CCWWGG	5 cut(s)	153, 211, 671, 1419, 1524
EcoT22I	ATGCAT	1 cut(s)	136
EcoT38I	GRGCYC	1 cut(s)	1098
EgeI	GGCGCC	2 cut(s)	178, 200
EheI	GGCGCC	2 cut(s)	178, 200
ErhI	CCWWGG	5 cut(s)	153, 211, 671, 1419, 1524
FaqI	GGGAC	2 cut(s)	389, 647
FauI	CCCGC	1 cut(s)	554
FbaI	TGATCA	1 cut(s)	717
Fnu4HI	GCNGC	6 cut(s)	6, 197, 508, 813, 834, 1554
FokI	GGATG	6 cut(s)	104, 275, 346, 469, 815, 842
FriOI	GRGCYC	1 cut(s)	1098
Fsp4HI	GCNGC	6 cut(s)	6, 197, 508, 813, 834, 1554
FspBI	CTAG	5 cut(s)	447, 672, 1250, 1557, 1668
GlaI	GCGC	2 cut(s)	178, 200
GluI	GCNGC	6 cut(s)	6, 197, 508, 813, 834, 1554
GsuI	CTGGAG	2 cut(s)	1172, 1329
HaeII	RGCGCY	2 cut(s)	180, 202
HaeIII	GGCC	6 cut(s)	219, 383, 695, 960, 1362, 1652
HapII	CCGG	1 cut(s)	1430
HgaI	GACGC	2 cut(s)	173, 1255
HhaI	GCGC	2 cut(s)	179, 201
Hin1I	GRCGYC	2 cut(s)	177, 199
Hin6I	GCGC	2 cut(s)	177, 199
HinP1I	GCGC	2 cut(s)	177, 199
HinfI	GANTC	7 cut(s)	116, 149, 478, 1415, 1460, 1466, 1496
HpaII	CCGG	1 cut(s)	1430
HphI	GGTGA	3 cut(s)	694, 793, 1310
Hpy188III	TCNNGA	9 cut(s)	374, 998, 1081, 1091, 1151, 1388, 1442, 1451, 1541
Hpy99I	CGWCG	2 cut(s)	164, 167
HpyCH4III	ACNGT	2 cut(s)	427, 1145
HpyCH4IV	ACGT	3 cut(s)	1027, 1257, 1278
HpyCH4V	TGCA	9 cut(s)	134, 510, 545, 660, 836, 909, 919, 1211, 1228
HpyF10VI	GCNNNNNNNGC	2 cut(s)	419, 551
HpyF3I	CTNAG	6 cut(s)	405, 764, 929, 1269, 1377, 1498
HpySE526I	ACGT	3 cut(s)	1027, 1257, 1278
Hsp92I	GRCGYC	2 cut(s)	177, 199
HspAI	GCGC	2 cut(s)	177, 199
KasI	GGCGCC	2 cut(s)	176, 198
Ksp22I	TGATCA	1 cut(s)	717
Kzo9I	GATC	9 cut(s)	415, 442, 717, 925, 994, 1114, 1384, 1426, 1534
LguI	GCTCTTC	1 cut(s)	1356
LmnI	GCTCC	1 cut(s)	1375
Lsp1109I	GCAGC	4 cut(s)	494, 820, 824, 1540
LweI	GCATC	3 cut(s)	121, 820, 1204
MaeI	CTAG	5 cut(s)	447, 672, 1250, 1557, 1668
MaeII	ACGT	3 cut(s)	1027, 1257, 1278
MaeIII	GTNAC	2 cut(s)	346, 1493
MalI	GATC	9 cut(s)	417, 444, 719, 927, 996, 1116, 1386, 1428, 1536
MboI	GATC	9 cut(s)	415, 442, 717, 925, 994, 1114, 1384, 1426, 1534
MflI	RGATCY	3 cut(s)	925, 1114, 1534
MhlI	GDGCHC	2 cut(s)	749, 1098
MlsI	TGGCCA	2 cut(s)	383, 1652
MluCI	AATT	7 cut(s)	190, 712, 738, 788, 1086, 1206, 1507
MluNI	TGGCCA	2 cut(s)	383, 1652
Mly113I	GGCGCC	2 cut(s)	177, 199
MlyI	GAGTC	5 cut(s)	110, 1424, 1460, 1469, 1490
MmeI	TCCRAC	2 cut(s)	144, 363
Mox20I	TGGCCA	2 cut(s)	383, 1652
Mph1103I	ATGCAT	1 cut(s)	136
MroXI	GAANNNNTTC	1 cut(s)	369
MscI	TGGCCA	2 cut(s)	383, 1652
MseI	TTAA	5 cut(s)	492, 606, 1059, 1289, 1340
MslI	CAYNNNNRTG	1 cut(s)	1008
Msp20I	TGGCCA	2 cut(s)	383, 1652
MspI	CCGG	1 cut(s)	1430
Mva1269I	GAATGC	1 cut(s)	1270
MvnI	CGCG	2 cut(s)	196, 483
MwoI	GCNNNNNNNGC	2 cut(s)	419, 551
NarI	GGCGCC	2 cut(s)	177, 199
NcoI	CCATGG	1 cut(s)	211
NdeII	GATC	9 cut(s)	415, 442, 717, 925, 994, 1114, 1384, 1426, 1534
NlaIV	GGNNCC	5 cut(s)	178, 200, 746, 1116, 1536
NmeAIII	GCCGAG	1 cut(s)	721
NmuCI	GTSAC	2 cut(s)	346, 1493
NsiI	ATGCAT	1 cut(s)	136
NspI	RCATGY	2 cut(s)	329, 1318
PagI	TCATGA	2 cut(s)	1080, 1450
PceI	AGGCCT	1 cut(s)	219
PciI	ACATGT	1 cut(s)	1314
PciSI	GCTCTTC	1 cut(s)	1356
PctI	GAATGC	1 cut(s)	1270
PdmI	GAANNNNTTC	1 cut(s)	369
PfeI	GAWTC	2 cut(s)	149, 478
PflFI	GACNNNGTC	1 cut(s)	1459
PkrI	GCNGC	6 cut(s)	7, 198, 509, 814, 835, 1555
PleI	GAGTC	5 cut(s)	110, 1423, 1460, 1468, 1490
PluTI	GGCGCC	2 cut(s)	180, 202
PpsI	GAGTC	5 cut(s)	110, 1423, 1460, 1468, 1490
Ppu21I	YACGTR	1 cut(s)	1028
PpuMI	RGGWCCY	1 cut(s)	758
PscI	ACATGT	1 cut(s)	1314
Psp124BI	GAGCTC	1 cut(s)	1098
Psp5II	RGGWCCY	1 cut(s)	758
PspN4I	GGNNCC	5 cut(s)	178, 200, 746, 1116, 1536
PspPI	GGNCC	4 cut(s)	693, 758, 958, 1439
PspPPI	RGGWCCY	1 cut(s)	758
PsrI	GAACNNNNNNTAC	2 cut(s)	385, 417
PstNI	CAGNNNCTG	1 cut(s)	1217
PsuI	RGATCY	3 cut(s)	925, 1114, 1534
PsyI	GACNNNGTC	1 cut(s)	1459
RsaI	GTAC	4 cut(s)	627, 1161, 1319, 1474
RsaNI	GTAC	4 cut(s)	626, 1160, 1318, 1473
RseI	CAYNNNNRTG	1 cut(s)	1008
SacI	GAGCTC	1 cut(s)	1098
SapI	GCTCTTC	1 cut(s)	1356
SaqAI	TTAA	5 cut(s)	492, 606, 1059, 1289, 1340
SatI	GCNGC	6 cut(s)	6, 197, 508, 813, 834, 1554
Sau3AI	GATC	9 cut(s)	415, 442, 717, 925, 994, 1114, 1384, 1426, 1534
Sau96I	GGNCC	4 cut(s)	693, 758, 958, 1439
SchI	GAGTC	5 cut(s)	110, 1424, 1460, 1469, 1490
SduI	GDGCHC	2 cut(s)	749, 1098
SfaNI	GCATC	3 cut(s)	121, 820, 1204
SfcI	CTRYAG	1 cut(s)	637
SfoI	GGCGCC	2 cut(s)	178, 200
SinI	GGWCC	2 cut(s)	758, 1439
SmiMI	CAYNNNNRTG	1 cut(s)	1008
SmlI	CTYRAG	1 cut(s)	1489
SmoI	CTYRAG	1 cut(s)	1489
Sse9I	AATT	7 cut(s)	190, 712, 738, 788, 1086, 1206, 1507
SseBI	AGGCCT	1 cut(s)	219
SsiI	CCGC	4 cut(s)	196, 413, 483, 561
SspDI	GGCGCC	2 cut(s)	176, 198
SspMI	CTAG	5 cut(s)	447, 672, 1250, 1557, 1668
SstI	GAGCTC	1 cut(s)	1098
StuI	AGGCCT	1 cut(s)	219
StyI	CCWWGG	5 cut(s)	153, 211, 671, 1419, 1524
TaaI	ACNGT	2 cut(s)	427, 1145
TaiI	ACGT	3 cut(s)	1030, 1260, 1281
TaqI	TCGA	4 cut(s)	975, 999, 1090, 1425
TaqII	GACCGA	1 cut(s)	1472
TasI	AATT	7 cut(s)	190, 712, 738, 788, 1086, 1206, 1507
TatI	WGTACW	2 cut(s)	625, 1317
TauI	GCSGC	1 cut(s)	199
TfiI	GAWTC	2 cut(s)	149, 478
Tru1I	TTAA	5 cut(s)	492, 606, 1059, 1289, 1340
Tru9I	TTAA	5 cut(s)	492, 606, 1059, 1289, 1340
TscAI	CASTG	5 cut(s)	391, 430, 937, 1300, 1312
TseFI	GTSAC	2 cut(s)	346, 1493
TseI	GCWGC	5 cut(s)	5, 507, 812, 833, 1553
Tsp45I	GTSAC	2 cut(s)	346, 1493
TspDTI	ATGAA	3 cut(s)	761, 781, 1494
TspRI	CASTG	5 cut(s)	391, 430, 937, 1300, 1312
Tth111I	GACNNNGTC	1 cut(s)	1459
VpaK11BI	GGWCC	2 cut(s)	758, 1439
XapI	RAATTY	3 cut(s)	712, 788, 1507
XceI	RCATGY	2 cut(s)	329, 1318
XmaJI	CCTAGG	1 cut(s)	671
XmnI	GAANNNNTTC	1 cut(s)	369
XspI	CTAG	5 cut(s)	447, 672, 1250, 1557, 1668
Zsp2I	ATGCAT	1 cut(s)	136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.