Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0001382

Physical Location & Seq

Genomic Coordinates Forward (+)

8555982 .. 8559623

Gene Structure 3642 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG108300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1209 bp

ATGGCTGCCGTTGAAGAAACAAAATCAGAGAAAGAGACTGAAGTGATTGCTCCTGAAGCCGAAGAAGAAGAAGTAGTAGTAGTAGAAGAGGATGAGGAAGAGGACTGGTCATCGGACTCCGACATCGGAGATGCATTGGACTATTTGGATTCCAAGGACGACGACGCAGTGGAAGGCGCCTTCACTATCAATTCGCGGCGCCCAAATGCCCATGGAGGCCTTCACTCTCGCCCCAACTCCTCTACTCTTCAGCCTCTCTCTAATCGCAACCAGAGGTTCTCCACTCACATCCGAGCTTCGCCGTTAGAGGAGTGGGAAGGGAGGCATGTTGGGATGTCCAACTCTGTGACGACTGCGATTAGGGAAAGTGTTCGGGACATGGCCACTGGAAGAACAAAGACTACTGAGAAGGCGGATCGTGCCACTGTTGAGCAGGCTATTGATCCTAGAACTCGGATGGTGTTATTCAAAATGCTGAATCGCGGAGTGTTTAAGGATATCAATGGCTGCATTTCTACTGGGAAAGAAGCAAATGTTTATCATGCAACAAAAGCTGATGGCGGGGAACTGGCAATCAAAGTCTTCAAAACCTCTATTCTTGTTTTTAAGGATAGGGATAGATATGTACAAGGGGACTACAGGTTCAGACATGGATACTGCAAGCACAATCCTAGGAAAATGGTGAAGACATGGGCCGAGAAAGAAAAAAGGAATTTGATCAGGCTAAAGGCTGAAGGAATTAGGTGCCCAGAAGTAGGTCCTCTAAGACTTCATGTTCTGGTGATGGAATTCATAGGTAAGGATGGTTGGGCAGCGCCACGGCTAAAGGATGCTGCATTATCACTTGACAAGCTACGAGAAGGTTATATGGAGATGGTTATTGCTATGCGAACATTATATCAGAAGTGCAAACTGGTGCATGGAGATCTCAGTGAATACAACATACTTTATTTTGAGGGCCACTTGTATATCATCGATGTTTCTCAATCAGTTGATCTCGACCACCCTCATGCTCTTGATTTCCTACGTGAAGATTGTGTCCATGTATCCGATTTCTTCAAAAAACATGGTGTAGCTGTCATGACAATTCGAGAGCTCTTTGACTTTATAGTGGATCCAGGTATTGCTGATGATGATATAGACAGTTATCTGGAGAAGGTTCGGTTCCTTTTGCTCTCTATTATGAATTCTTGGGCTCCTATTAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030490 GO:0030684 GO:0030688 GO:0031323 GO:0031325 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0034708 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090070 GO:0090304 GO:1901360 GO:1902494 GO:1990234 GO:1990904 GO:2000232 GO:2000234

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

RIO1

Protein Analysis

402

Amino Acids

45.75

Weight (kDa)

5.47

Isoelectric Point (pI)

31.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RIO1	PF01163	178 - 365	1.7e-70	RIO domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24990 AT5G37350 AT5G37350
fragaria_vesca	FvH4_5g08310 FvH4_5g08310 FvH4_5g08310 FvH4_5g16770 FvH4_5g16770 FvH4_5g16770 FvH4_5g25261
malus_domestica	MD06G1142000.v1.1 MD14G1157300.v1.1
prunus_persica	Prupe.5G151200_v2.0.a1
pyrus_communis	pycom06g13180 pycom14g13080
rosa_chinensis	RchiOBHm_Chr5g0020401 RchiOBHm_Chr5g0063241 RchiOBHm_Chr5g0063291 RchiOBHm_Chr7g0190211
rosa_laevigata	RLG00000004553 RLG00000032520 RLG00000035614 RLG00000035619
rosa_multiflora	Rmu_sc0000033.1_g000014 Rmu_sc0004886.1_g000019 Rmu_sc0005045.1_g000016
rosa_roxburghii	Rroxscaffold_1G00017410 Rroxscaffold_1G00017420 Rroxscaffold_1G00017470 Rroxscaffold_3G00264780
rosa_rugosa	Rorug05G0058900 Rorug05G0058900 Rorug05G0059000 Rorug05G0059100 Rorug05G0355500 Rorug06G0503000
rosa_samantha	Rh5AG149600 Rh5AG415200 Rh5AG415300 Rh5AG415500 Rh5BG149000 Rh5BG430400 Rh5CG160500 Rh5CG453800 Rh5DG147800 Rh5DG444000 Rh7AG108300 Rh7BG110900 Rh7CG113300 Rh7DG111700
rosa_wichuraiana	Rw5G013250 Rw5G039050 Rw7G009390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	176, 198, 744
AccII	CGCG	2 cut(s)	196, 483
AciI	CCGC	4 cut(s)	196, 413, 483, 561
AclWI	GGATC	4 cut(s)	423, 437, 1109, 1122
AcoI	YGGCCR	1 cut(s)	381
AcsI	RAATTY	3 cut(s)	712, 788, 1186
AcuI	CTGAAG	4 cut(s)	60, 75, 233, 753
AcyI	GRCGYC	2 cut(s)	177, 199
AfaI	GTAC	1 cut(s)	627
AfiI	CCNNNNNNNGG	1 cut(s)	755
AgsI	TTSAA	4 cut(s)	14, 469, 586, 1060
AjnI	CCWGG	1 cut(s)	1117
AloI	GAACNNNNNNTCC	2 cut(s)	626, 658
AluBI	AGCT	5 cut(s)	296, 554, 853, 1076, 1096
AluI	AGCT	5 cut(s)	296, 554, 853, 1076, 1096
Alw21I	GWGCWC	1 cut(s)	1098
Alw26I	GTCTC	1 cut(s)	29
AlwI	GGATC	4 cut(s)	423, 437, 1109, 1122
AoxI	GGCC	4 cut(s)	217, 381, 693, 958
ApeKI	GCWGC	4 cut(s)	5, 507, 812, 833
ApoI	RAATTY	3 cut(s)	712, 788, 1186
Asp700I	GAANNNNTTC	1 cut(s)	369
AspA2I	CCTAGG	1 cut(s)	671
AspLEI	GCGC	3 cut(s)	179, 201, 817
AspS9I	GGNCC	3 cut(s)	693, 758, 958
AsuHPI	GGTGA	2 cut(s)	694, 793
AvaII	GGWCC	1 cut(s)	758
AvrII	CCTAGG	1 cut(s)	671
BaeGI	GKGCMC	1 cut(s)	749
BalI	TGGCCA	1 cut(s)	383
BamHI	GGATCC	1 cut(s)	1114
BanI	GGYRCC	3 cut(s)	176, 198, 744
BanII	GRGCYC	2 cut(s)	1098, 1198
BbsI	GAAGAC	2 cut(s)	574, 692
Bbv12I	GWGCWC	1 cut(s)	1098
BbvI	GCAGC	3 cut(s)	494, 820, 824
BccI	CCATC	5 cut(s)	451, 551, 778, 797, 868
BceAI	ACGGC	2 cut(s)	286, 836
BciT130I	CCWGG	1 cut(s)	1119
BciVI	GTATCC	2 cut(s)	647, 1057
BclI	TGATCA	1 cut(s)	717
BcoDI	GTCTC	1 cut(s)	29
BfaI	CTAG	2 cut(s)	447, 672
BfmI	CTRYAG	1 cut(s)	637
BfoI	RGCGCY	3 cut(s)	180, 202, 818
BfuI	GTATCC	2 cut(s)	647, 1057
BglII	AGATCT	1 cut(s)	925
BisI	GCNGC	5 cut(s)	6, 197, 508, 813, 834
BlnI	CCTAGG	1 cut(s)	671
BlsI	GCNGC	5 cut(s)	7, 198, 509, 814, 835
Bme1390I	CCNGG	1 cut(s)	1119
Bme18I	GGWCC	1 cut(s)	758
BmgT120I	GGNCC	3 cut(s)	693, 758, 958
BmiI	GGNNCC	6 cut(s)	178, 200, 746, 1116, 1166, 1197
BmrFI	CCNGG	1 cut(s)	1119
BmrI	ACTGGG	1 cut(s)	528
BmsI	GCATC	2 cut(s)	121, 820
BmuI	ACTGGG	1 cut(s)	528
BpiI	GAAGAC	2 cut(s)	574, 692
BpmI	CTGGAG	1 cut(s)	1172
Bsa29I	ATCGAT	1 cut(s)	975
BsaAI	YACGTR	1 cut(s)	1028
BsaHI	GRCGYC	2 cut(s)	177, 199
BsaJI	CCNNGG	4 cut(s)	153, 211, 671, 818
Bsc4I	CCNNNNNNNGG	1 cut(s)	755
Bse1I	ACTGG	5 cut(s)	110, 391, 523, 573, 918
BseBI	CCWGG	1 cut(s)	1119
BseCI	ATCGAT	1 cut(s)	975
BseDI	CCNNGG	4 cut(s)	153, 211, 671, 818
BseGI	GGATG	6 cut(s)	97, 288, 339, 462, 808, 835
BseLI	CCNNNNNNNGG	1 cut(s)	755
BseMII	CTCAG	2 cut(s)	396, 943
BseNI	ACTGG	5 cut(s)	110, 391, 523, 573, 918
BseRI	GAGGAG	2 cut(s)	229, 323
BseSI	GKGCMC	1 cut(s)	749
BseXI	GCAGC	3 cut(s)	494, 820, 824
Bsh1236I	CGCG	2 cut(s)	196, 483
BshFI	GGCC	4 cut(s)	219, 383, 695, 960
BshNI	GGYRCC	3 cut(s)	176, 198, 744
BshVI	ATCGAT	1 cut(s)	975
BsiHKAI	GWGCWC	1 cut(s)	1098
BslFI	GGGAC	2 cut(s)	389, 647
BslI	CCNNNNNNNGG	1 cut(s)	755
BsmAI	GTCTC	1 cut(s)	29
BsmFI	GGGAC	2 cut(s)	389, 647
BsnI	GGCC	4 cut(s)	219, 383, 695, 960
Bsp1286I	GDGCHC	3 cut(s)	749, 1098, 1198
Bsp1407I	TGTACA	1 cut(s)	625
Bsp143I	GATC	6 cut(s)	415, 442, 717, 925, 994, 1114
Bsp19I	CCATGG	1 cut(s)	211
BspACI	CCGC	4 cut(s)	196, 413, 483, 561
BspANI	GGCC	4 cut(s)	219, 383, 695, 960
BspCNI	CTCAG	2 cut(s)	397, 942
BspDI	ATCGAT	1 cut(s)	975
BspFNI	CGCG	2 cut(s)	196, 483
BspHI	TCATGA	1 cut(s)	1080
BspLI	GGNNCC	6 cut(s)	178, 200, 746, 1116, 1166, 1197
BspPI	GGATC	4 cut(s)	423, 437, 1109, 1122
BspT107I	GGYRCC	3 cut(s)	176, 198, 744
BsrGI	TGTACA	1 cut(s)	625
BsrI	ACTGG	5 cut(s)	110, 391, 523, 573, 918
BssECI	CCNNGG	4 cut(s)	153, 211, 671, 818
BssMI	GATC	6 cut(s)	415, 442, 717, 925, 994, 1114
BssNI	GRCGYC	2 cut(s)	177, 199
BssT1I	CCWWGG	3 cut(s)	153, 211, 671
Bst2UI	CCWGG	1 cut(s)	1119
Bst4CI	ACNGT	2 cut(s)	427, 1145
Bst6I	CTCTTC	3 cut(s)	81, 93, 252
BstACI	GRCGYC	2 cut(s)	177, 199
BstAUI	TGTACA	1 cut(s)	625
BstBAI	YACGTR	1 cut(s)	1028
BstC8I	GCNNGC	2 cut(s)	435, 662
BstDEI	CTNAG	3 cut(s)	405, 764, 929
BstDSI	CCRYGG	2 cut(s)	211, 818
BstF5I	GGATG	6 cut(s)	97, 288, 339, 462, 808, 835
BstFNI	CGCG	2 cut(s)	196, 483
BstH2I	RGCGCY	3 cut(s)	180, 202, 818
BstHHI	GCGC	3 cut(s)	179, 201, 817
BstKTI	GATC	6 cut(s)	418, 445, 720, 928, 997, 1117
BstMAI	GTCTC	1 cut(s)	29
BstMBI	GATC	6 cut(s)	415, 442, 717, 925, 994, 1114
BstMWI	GCNNNNNNNGC	3 cut(s)	56, 419, 551
BstNI	CCWGG	1 cut(s)	1119
BstNSI	RCATGY	1 cut(s)	329
BstSCI	CCNGG	1 cut(s)	1117
BstSFI	CTRYAG	1 cut(s)	637
BstSLI	GKGCMC	1 cut(s)	749
BstUI	CGCG	2 cut(s)	196, 483
BstV1I	GCAGC	3 cut(s)	494, 820, 824
BstV2I	GAAGAC	2 cut(s)	574, 692
BstX2I	RGATCY	2 cut(s)	925, 1114
BstYI	RGATCY	2 cut(s)	925, 1114
Bsu15I	ATCGAT	1 cut(s)	975
BsuI	GTATCC	2 cut(s)	647, 1057
BsuRI	GGCC	4 cut(s)	219, 383, 695, 960
BsuTUI	ATCGAT	1 cut(s)	975
BtgI	CCRYGG	2 cut(s)	211, 818
BtsCI	GGATG	6 cut(s)	97, 288, 339, 462, 808, 835
BtsI	GCAGTG	1 cut(s)	174
BtsIMutI	CAGTG	4 cut(s)	174, 384, 423, 937
Cac8I	GCNNGC	2 cut(s)	435, 662
CciI	TCATGA	1 cut(s)	1080
CfoI	GCGC	3 cut(s)	179, 201, 817
Cfr13I	GGNCC	3 cut(s)	693, 758, 958
ClaI	ATCGAT	1 cut(s)	975
CseI	GACGC	1 cut(s)	173
Csp6I	GTAC	1 cut(s)	626
CviQI	GTAC	1 cut(s)	626
DdeI	CTNAG	3 cut(s)	405, 764, 929
DinI	GGCGCC	2 cut(s)	178, 200
DpnI	GATC	6 cut(s)	417, 444, 719, 927, 996, 1116
DpnII	GATC	6 cut(s)	415, 442, 717, 925, 994, 1114
EaeI	YGGCCR	1 cut(s)	381
Eam1104I	CTCTTC	3 cut(s)	81, 93, 252
EarI	CTCTTC	3 cut(s)	81, 93, 252
EciI	GGCGGA	1 cut(s)	428
Ecl136II	GAGCTC	1 cut(s)	1096
Eco130I	CCWWGG	3 cut(s)	153, 211, 671
Eco147I	AGGCCT	1 cut(s)	219
Eco24I	GRGCYC	2 cut(s)	1098, 1198
Eco32I	GATATC	1 cut(s)	499
Eco47I	GGWCC	1 cut(s)	758
Eco53kI	GAGCTC	1 cut(s)	1096
Eco57I	CTGAAG	4 cut(s)	60, 75, 233, 753
EcoICRI	GAGCTC	1 cut(s)	1096
EcoO109I	RGGNCCY	1 cut(s)	758
EcoRI	GAATTC	2 cut(s)	788, 1186
EcoRII	CCWGG	1 cut(s)	1117
EcoRV	GATATC	1 cut(s)	499
EcoT14I	CCWWGG	3 cut(s)	153, 211, 671
EcoT22I	ATGCAT	1 cut(s)	136
EcoT38I	GRGCYC	2 cut(s)	1098, 1198
EgeI	GGCGCC	2 cut(s)	178, 200
EheI	GGCGCC	2 cut(s)	178, 200
ErhI	CCWWGG	3 cut(s)	153, 211, 671
FaqI	GGGAC	2 cut(s)	389, 647
FauI	CCCGC	1 cut(s)	554
FbaI	TGATCA	1 cut(s)	717
Fnu4HI	GCNGC	5 cut(s)	6, 197, 508, 813, 834
FokI	GGATG	6 cut(s)	104, 275, 346, 469, 815, 842
FriOI	GRGCYC	2 cut(s)	1098, 1198
Fsp4HI	GCNGC	5 cut(s)	6, 197, 508, 813, 834
FspBI	CTAG	2 cut(s)	447, 672
GlaI	GCGC	3 cut(s)	178, 200, 816
GluI	GCNGC	5 cut(s)	6, 197, 508, 813, 834
GsuI	CTGGAG	1 cut(s)	1172
HaeII	RGCGCY	3 cut(s)	180, 202, 818
HaeIII	GGCC	4 cut(s)	219, 383, 695, 960
HgaI	GACGC	1 cut(s)	173
HhaI	GCGC	3 cut(s)	179, 201, 817
Hin1I	GRCGYC	2 cut(s)	177, 199
Hin6I	GCGC	3 cut(s)	177, 199, 815
HinP1I	GCGC	3 cut(s)	177, 199, 815
HinfI	GANTC	3 cut(s)	116, 149, 478
HphI	GGTGA	2 cut(s)	694, 793
Hpy188I	TCNGA	9 cut(s)	28, 115, 121, 128, 293, 456, 647, 903, 1051
Hpy188III	TCNNGA	7 cut(s)	53, 374, 998, 1016, 1081, 1091, 1151
Hpy99I	CGWCG	2 cut(s)	164, 167
HpyAV	CCTTC	8 cut(s)	167, 190, 230, 311, 403, 728, 854, 1150
HpyCH4III	ACNGT	2 cut(s)	427, 1145
HpyCH4IV	ACGT	1 cut(s)	1027
HpyCH4V	TGCA	7 cut(s)	134, 510, 545, 660, 836, 909, 919
HpyF10VI	GCNNNNNNNGC	3 cut(s)	56, 419, 551
HpyF3I	CTNAG	3 cut(s)	405, 764, 929
HpySE526I	ACGT	1 cut(s)	1027
Hsp92I	GRCGYC	2 cut(s)	177, 199
HspAI	GCGC	3 cut(s)	177, 199, 815
KasI	GGCGCC	2 cut(s)	176, 198
Ksp22I	TGATCA	1 cut(s)	717
Kzo9I	GATC	6 cut(s)	415, 442, 717, 925, 994, 1114
LmnI	GCTCC	2 cut(s)	55, 1201
Lsp1109I	GCAGC	3 cut(s)	494, 820, 824
LweI	GCATC	2 cut(s)	121, 820
MaeI	CTAG	2 cut(s)	447, 672
MaeII	ACGT	1 cut(s)	1027
MaeIII	GTNAC	1 cut(s)	346
MalI	GATC	6 cut(s)	417, 444, 719, 927, 996, 1116
MboI	GATC	6 cut(s)	415, 442, 717, 925, 994, 1114
MflI	RGATCY	2 cut(s)	925, 1114
MhlI	GDGCHC	3 cut(s)	749, 1098, 1198
MlsI	TGGCCA	1 cut(s)	383
MluCI	AATT	6 cut(s)	190, 712, 738, 788, 1086, 1186
MluNI	TGGCCA	1 cut(s)	383
Mly113I	GGCGCC	2 cut(s)	177, 199
MlyI	GAGTC	1 cut(s)	110
MmeI	TCCRAC	2 cut(s)	144, 363
Mox20I	TGGCCA	1 cut(s)	383
Mph1103I	ATGCAT	1 cut(s)	136
MroXI	GAANNNNTTC	1 cut(s)	369
MscI	TGGCCA	1 cut(s)	383
MseI	TTAA	2 cut(s)	492, 606
MslI	CAYNNNNRTG	1 cut(s)	1008
Msp20I	TGGCCA	1 cut(s)	383
MspR9I	CCNGG	1 cut(s)	1119
MvaI	CCWGG	1 cut(s)	1119
MvnI	CGCG	2 cut(s)	196, 483
MwoI	GCNNNNNNNGC	3 cut(s)	56, 419, 551
NarI	GGCGCC	2 cut(s)	177, 199
NcoI	CCATGG	1 cut(s)	211
NdeII	GATC	6 cut(s)	415, 442, 717, 925, 994, 1114
NlaIV	GGNNCC	6 cut(s)	178, 200, 746, 1116, 1166, 1197
NmeAIII	GCCGAG	1 cut(s)	721
NmuCI	GTSAC	1 cut(s)	346
NsiI	ATGCAT	1 cut(s)	136
NspI	RCATGY	1 cut(s)	329
PagI	TCATGA	1 cut(s)	1080
PceI	AGGCCT	1 cut(s)	219
PdmI	GAANNNNTTC	1 cut(s)	369
PfeI	GAWTC	2 cut(s)	149, 478
PkrI	GCNGC	5 cut(s)	7, 198, 509, 814, 835
PleI	GAGTC	1 cut(s)	110
PluTI	GGCGCC	2 cut(s)	180, 202
PpsI	GAGTC	1 cut(s)	110
Ppu21I	YACGTR	1 cut(s)	1028
PpuMI	RGGWCCY	1 cut(s)	758
Psp124BI	GAGCTC	1 cut(s)	1098
Psp5II	RGGWCCY	1 cut(s)	758
Psp6I	CCWGG	1 cut(s)	1117
PspGI	CCWGG	1 cut(s)	1117
PspN4I	GGNNCC	6 cut(s)	178, 200, 746, 1116, 1166, 1197
PspPI	GGNCC	3 cut(s)	693, 758, 958
PspPPI	RGGWCCY	1 cut(s)	758
PsrI	GAACNNNNNNTAC	2 cut(s)	385, 417
PsuI	RGATCY	2 cut(s)	925, 1114
RsaI	GTAC	1 cut(s)	627
RsaNI	GTAC	1 cut(s)	626
RseI	CAYNNNNRTG	1 cut(s)	1008
SacI	GAGCTC	1 cut(s)	1098
SaqAI	TTAA	2 cut(s)	492, 606
SatI	GCNGC	5 cut(s)	6, 197, 508, 813, 834
Sau3AI	GATC	6 cut(s)	415, 442, 717, 925, 994, 1114
Sau96I	GGNCC	3 cut(s)	693, 758, 958
SchI	GAGTC	1 cut(s)	110
ScrFI	CCNGG	1 cut(s)	1119
SduI	GDGCHC	3 cut(s)	749, 1098, 1198
SfaNI	GCATC	2 cut(s)	121, 820
SfcI	CTRYAG	1 cut(s)	637
SfoI	GGCGCC	2 cut(s)	178, 200
SinI	GGWCC	1 cut(s)	758
SmiMI	CAYNNNNRTG	1 cut(s)	1008
Sse9I	AATT	6 cut(s)	190, 712, 738, 788, 1086, 1186
SseBI	AGGCCT	1 cut(s)	219
SsiI	CCGC	4 cut(s)	196, 413, 483, 561
SspDI	GGCGCC	2 cut(s)	176, 198
SspMI	CTAG	2 cut(s)	447, 672
SstI	GAGCTC	1 cut(s)	1098
StuI	AGGCCT	1 cut(s)	219
StyD4I	CCNGG	1 cut(s)	1117
StyI	CCWWGG	3 cut(s)	153, 211, 671
TaaI	ACNGT	2 cut(s)	427, 1145
TaiI	ACGT	1 cut(s)	1030
TaqI	TCGA	3 cut(s)	975, 999, 1090
TasI	AATT	6 cut(s)	190, 712, 738, 788, 1086, 1186
TatI	WGTACW	1 cut(s)	625
TauI	GCSGC	1 cut(s)	199
TfiI	GAWTC	2 cut(s)	149, 478
Tru1I	TTAA	2 cut(s)	492, 606
Tru9I	TTAA	2 cut(s)	492, 606
TscAI	CASTG	4 cut(s)	174, 391, 430, 937
TseFI	GTSAC	1 cut(s)	346
TseI	GCWGC	4 cut(s)	5, 507, 812, 833
Tsp45I	GTSAC	1 cut(s)	346
TspDTI	ATGAA	3 cut(s)	761, 781, 1199
TspRI	CASTG	4 cut(s)	174, 391, 430, 937
VpaK11BI	GGWCC	1 cut(s)	758
XapI	RAATTY	3 cut(s)	712, 788, 1186
XceI	RCATGY	1 cut(s)	329
XmaJI	CCTAGG	1 cut(s)	671
XmnI	GAANNNNTTC	1 cut(s)	369
XspI	CTAG	2 cut(s)	447, 672
Zsp2I	ATGCAT	1 cut(s)	136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.