Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0001382

Physical Location & Seq

Genomic Coordinates Forward (+)

71728589 .. 71731862

Gene Structure 3274 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG415500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGGCTGATGTTGCTGAAGAAGGATTAGAGAAGTCCCTTGAAGGAGAAGACGAACCGAACTTGGACTCATGCGGGGGCTGTAGGTGTGGCTGTTGCTGGTCACTACTATGGTCGTCATCAGACTCAGACACCCAACAAGATGTTGACTCTTTTGATTCCGAGGAGGACGATGATGAAGCCCTTAAAGCGTGTTTTCCAATCAACTATGCTAGCCAGCGCCCCAATGCTCATGGAGGCCTACACTCTCGCCCTAATAACTCCAACCTTCGTCATTTCTCTAACCTCGTCAGACTTTCGCCTCTAGAGGAGTGGGAAGGCAGGTTGAATATAGACATGTCCAACTATCTCATAACTTCCATTGGCAGCAGCATTAGGGTTAAAGATAAAGCCGGTCGTGCCACTTTTGGCAAGGGTTTTGATCTTACAACATCTTTGGCTATGCGGAAACTGCACAATCGCGGTGAATATGAGTTTATCCATGGCTGCATTTCTACGGGGAAAGATGCAAATGTTTATTACGCAACAAGATCTGATGGCCAACAAGATGTGTGTTACCCAACAAGATCTGGTGACCAGGACCTGGCTATCAAAGTGTACAAAACATCTGTTATGGGTTTTAAGCACAGAGGTGGATATGTACAAGGGGACTACCGATTCAGACATGAATATAGTGGGCACAATCCCAGGAAACAGGTGAGCAAATGGGTTGAGAAAGAGTGGAGGAATCTGAAGAGGATAAAGGAAGCTGGAATCAGATGCCCAACTGCATATGACTTTGGACCTATTGTTCTGGTCATGGAATTCATAGGGAAGGCAGGTTGTGCAGCACCTCGTTTGAAGGATGCCACATTGTCATTACACGAGCTACGAGAAGGATATAGGGAGATGATTATTTCTATGCGAATGCTATATCAGAAGGCCAAACTGGTGCATGCAGACCTCAGCGAAGACAACGTACTTTATTTTGAAGGCCATTTGTACATGATTGATGTTTCTCAAGCAGTTGAGCTAAACGACCCTAGTGCGAATGGATTTCTATGTAAAGATTGTCTCTATGTCTCTGATTTCTTTAAAAAACATGGAGCAGCTGTTATGACAACACGGGAGCTCTTTGATTTTATTGTTGATCCATGTATTTCGGATGACATGGTGGACAGTTATCTGAATATGGTCCAATATAAAGTTGTGGCAAGGGGATCTATATCTGCAGAGGATGAAATTGTAGACTCTGTGTTTGTGCAGTCATTTATTGCAAGTAGTTTAGAAAATTTGAAGAATGTTGAGGCGGATGCAAATCATGCAATACAGATAACTAGTGATAAGGACACTGAAGAGATGGACTATAAAACTATTACTGCACTGGAGCAGGCACTTTCTAGAGTCCAACTAGCTCCACTTGAGACCAATTCTGATGAAGAAAACTCAAGCGATTTAGATTCCTCATCTGGAATCAAGGCACAGAACAAGAAGGTTGCGAGAAAATATTTCAAGAAGAAAGTCAAAGAAGTGAAGATGGAATCTCGGAAACATGAATTGCAAAAGCGCCCAAAGGCTGTAAAGAAAAGAAAGAAGAGGCTGTCGGAACCTTGCAGGACCAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030490 GO:0030684 GO:0030688 GO:0031323 GO:0031325 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0034708 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090070 GO:0090304 GO:1901360 GO:1902494 GO:1990234 GO:1990904 GO:2000232 GO:2000234

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

RIO1

Protein Analysis

533

Amino Acids

60.32

Weight (kDa)

6.11

Isoelectric Point (pI)

35.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RIO1	PF01163	170 - 369	4.2e-57	RIO domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24990 AT5G37350 AT5G37350
fragaria_vesca	FvH4_5g08310 FvH4_5g08310 FvH4_5g08310 FvH4_5g16770 FvH4_5g16770 FvH4_5g16770 FvH4_5g25261
malus_domestica	MD06G1142000.v1.1 MD14G1157300.v1.1
prunus_persica	Prupe.5G151200_v2.0.a1
pyrus_communis	pycom06g13180 pycom14g13080
rosa_chinensis	RchiOBHm_Chr5g0020401 RchiOBHm_Chr5g0063241 RchiOBHm_Chr5g0063291 RchiOBHm_Chr7g0190211
rosa_laevigata	RLG00000004553 RLG00000032520 RLG00000035614 RLG00000035619
rosa_multiflora	Rmu_sc0000033.1_g000014 Rmu_sc0004886.1_g000019 Rmu_sc0005045.1_g000016
rosa_roxburghii	Rroxscaffold_1G00017410 Rroxscaffold_1G00017420 Rroxscaffold_1G00017470 Rroxscaffold_3G00264780
rosa_rugosa	Rorug05G0058900 Rorug05G0058900 Rorug05G0059000 Rorug05G0059100 Rorug05G0355500 Rorug06G0503000
rosa_samantha	Rh5AG149600 Rh5AG415200 Rh5AG415300 Rh5AG415500 Rh5BG149000 Rh5BG430400 Rh5CG160500 Rh5CG453800 Rh5DG147800 Rh5DG444000 Rh7AG108300 Rh7BG110900 Rh7CG113300 Rh7DG111700
rosa_wichuraiana	Rw5G013250 Rw5G039050 Rw7G009390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	309, 806
AccB7I	CCANNNNNTGG	1 cut(s)	580
AccI	GTMKAC	1 cut(s)	1224
AccII	CGCG	1 cut(s)	459
AciI	CCGC	4 cut(s)	72, 442, 459, 1286
AclWI	GGATC	2 cut(s)	1121, 1204
AcoI	YGGCCR	1 cut(s)	535
AcsI	RAATTY	2 cut(s)	800, 1267
AcuI	CTGAAG	3 cut(s)	36, 749, 1350
AfaI	GTAC	4 cut(s)	596, 639, 957, 980
AfiI	CCNNNNNNNGG	1 cut(s)	580
AflIII	ACRYGT	1 cut(s)	333
AgsI	TTSAA	6 cut(s)	41, 325, 838, 968, 1273, 1489
AhlI	ACTAGT	1 cut(s)	1313
AjnI	CCWGG	4 cut(s)	573, 579, 683, 1595
AleI	CACNNNNGTG	1 cut(s)	627
AloI	GAACNNNNNNTCC	2 cut(s)	771, 803
AluBI	AGCT	6 cut(s)	746, 865, 1009, 1088, 1108, 1391
AluI	AGCT	6 cut(s)	746, 865, 1009, 1088, 1108, 1391
Alw21I	GWGCWC	1 cut(s)	1110
Alw26I	GTCTC	3 cut(s)	1055, 1063, 1394
AlwI	GGATC	2 cut(s)	1121, 1204
AlwNI	CAGNNNCTG	1 cut(s)	580
AoxI	GGCC	4 cut(s)	235, 535, 918, 970
ApeKI	GCWGC	5 cut(s)	363, 366, 483, 824, 1085
ApoI	RAATTY	2 cut(s)	800, 1267
ArsI	GACNNNNNNTTYG	2 cut(s)	1217, 1249
AspLEI	GCGC	2 cut(s)	219, 1545
AspS9I	GGNCC	4 cut(s)	577, 779, 1171, 1593
AsuHPI	GGTGA	3 cut(s)	473, 581, 706
AsuNHI	GCTAGC	1 cut(s)	209
AvaII	GGWCC	4 cut(s)	577, 779, 1171, 1593
BaeGI	GKGCMC	1 cut(s)	678
BalI	TGGCCA	1 cut(s)	537
BanII	GRGCYC	1 cut(s)	1110
BarI	GAAGNNNNNNTAC	2 cut(s)	939, 971
BauI	CACGAG	1 cut(s)	860
BbsI	GAAGAC	2 cut(s)	54, 954
Bbv12I	GWGCWC	1 cut(s)	1110
BbvCI	CCTCAGC	1 cut(s)	941
BbvI	GCAGC	5 cut(s)	375, 378, 470, 836, 1097
BccI	CCATC	3 cut(s)	527, 1330, 1507
BcgI	CGANNNNNNTGC	2 cut(s)	1004, 1038
BciT130I	CCWGG	4 cut(s)	575, 581, 685, 1597
BcoDI	GTCTC	3 cut(s)	1055, 1063, 1394
BcuI	ACTAGT	1 cut(s)	1313
BfaI	CTAG	6 cut(s)	210, 302, 1020, 1314, 1377, 1388
BfmI	CTRYAG	2 cut(s)	79, 1206
BfoI	RGCGCY	2 cut(s)	220, 1546
BfuAI	ACCTGC	2 cut(s)	309, 806
BglII	AGATCT	2 cut(s)	527, 563
BisI	GCNGC	5 cut(s)	364, 367, 484, 825, 1086
BlsI	GCNGC	5 cut(s)	365, 368, 485, 826, 1087
Bme1390I	CCNGG	4 cut(s)	575, 581, 685, 1597
Bme18I	GGWCC	4 cut(s)	577, 779, 1171, 1593
BmgT120I	GGNCC	4 cut(s)	577, 779, 1171, 1593
BmiI	GGNNCC	1 cut(s)	1584
BmrFI	CCNGG	4 cut(s)	575, 581, 685, 1597
BmsI	GCATC	4 cut(s)	493, 746, 832, 1279
BmtI	GCTAGC	1 cut(s)	213
BpiI	GAAGAC	2 cut(s)	54, 954
BpmI	CTGGAG	1 cut(s)	1382
Bpu10I	CCTNAGC	1 cut(s)	941
BpuEI	CTTGAG	3 cut(s)	981, 1408, 1418
BsaBI	GATNNNNATC	2 cut(s)	1201, 1293
BsaI	GGTCTC	1 cut(s)	1394
BsaJI	CCNNGG	3 cut(s)	159, 478, 683
BsaXI	ACNNNNNCTCC	2 cut(s)	1074, 1104
Bsc4I	CCNNNNNNNGG	1 cut(s)	580
Bse118I	RCCGGY	1 cut(s)	389
Bse1I	ACTGG	2 cut(s)	930, 1365
Bse8I	GATNNNNATC	2 cut(s)	1201, 1293
BseBI	CCWGG	4 cut(s)	575, 581, 685, 1597
BseDI	CCNNGG	3 cut(s)	159, 478, 683
BseGI	GGATG	4 cut(s)	847, 1147, 1219, 1294
BseJI	GATNNNNATC	2 cut(s)	1201, 1293
BseLI	CCNNNNNNNGG	1 cut(s)	580
BseMII	CTCAG	2 cut(s)	138, 955
BseNI	ACTGG	2 cut(s)	930, 1365
BseRI	GAGGAG	2 cut(s)	176, 320
BseSI	GKGCMC	1 cut(s)	678
BseXI	GCAGC	5 cut(s)	375, 378, 470, 836, 1097
BsgI	GTGCAG	4 cut(s)	434, 843, 1259, 1341
Bsh1236I	CGCG	1 cut(s)	459
Bsh1285I	CGRYCG	1 cut(s)	394
BshFI	GGCC	4 cut(s)	237, 537, 920, 972
BsiEI	CGRYCG	1 cut(s)	394
BsiHKAI	GWGCWC	1 cut(s)	1110
BsiSI	CCGG	1 cut(s)	390
BslFI	GGGAC	2 cut(s)	19, 659
BslI	CCNNNNNNNGG	1 cut(s)	580
BsmAI	GTCTC	3 cut(s)	1055, 1063, 1394
BsmFI	GGGAC	2 cut(s)	19, 659
BsmI	GAATGC	1 cut(s)	909
BsnI	GGCC	4 cut(s)	237, 537, 920, 972
Bso31I	GGTCTC	1 cut(s)	1394
Bsp1286I	GDGCHC	2 cut(s)	678, 1110
Bsp1407I	TGTACA	3 cut(s)	594, 637, 978
Bsp143I	GATC	5 cut(s)	418, 527, 563, 1126, 1196
Bsp19I	CCATGG	1 cut(s)	478
BspACI	CCGC	4 cut(s)	72, 442, 459, 1286
BspANI	GGCC	4 cut(s)	237, 537, 920, 972
BspCNI	CTCAG	2 cut(s)	137, 954
BspFNI	CGCG	1 cut(s)	459
BspLI	GGNNCC	1 cut(s)	1584
BspMAI	CTGCAG	1 cut(s)	1210
BspMI	ACCTGC	2 cut(s)	309, 806
BspOI	GCTAGC	1 cut(s)	213
BspPI	GGATC	2 cut(s)	1121, 1204
BspTNI	GGTCTC	1 cut(s)	1394
BsrFI	RCCGGY	1 cut(s)	389
BsrGI	TGTACA	3 cut(s)	594, 637, 978
BsrI	ACTGG	2 cut(s)	930, 1365
BssAI	RCCGGY	1 cut(s)	389
BssECI	CCNNGG	3 cut(s)	159, 478, 683
BssMI	GATC	5 cut(s)	418, 527, 563, 1126, 1196
BssSI	CACGAG	1 cut(s)	860
BssT1I	CCWWGG	1 cut(s)	478
Bst2BI	CACGAG	1 cut(s)	860
Bst2UI	CCWGG	4 cut(s)	575, 581, 685, 1597
Bst4CI	ACNGT	1 cut(s)	1157
Bst6I	CTCTTC	3 cut(s)	725, 1326, 1565
BstAPI	GCANNNNNTGC	2 cut(s)	821, 1298
BstAUI	TGTACA	3 cut(s)	594, 637, 978
BstC8I	GCNNGC	4 cut(s)	211, 215, 933, 1368
BstDEI	CTNAG	2 cut(s)	124, 941
BstDSI	CCRYGG	1 cut(s)	478
BstEII	GGTNACC	1 cut(s)	569
BstF5I	GGATG	4 cut(s)	847, 1147, 1219, 1294
BstFNI	CGCG	1 cut(s)	459
BstH2I	RGCGCY	2 cut(s)	220, 1546
BstHHI	GCGC	2 cut(s)	219, 1545
BstKTI	GATC	5 cut(s)	421, 530, 566, 1129, 1199
BstMAI	GTCTC	3 cut(s)	1055, 1063, 1394
BstMBI	GATC	5 cut(s)	418, 527, 563, 1126, 1196
BstMCI	CGRYCG	1 cut(s)	394
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 185, 395, 448, 821, 1298
BstNI	CCWGG	4 cut(s)	575, 581, 685, 1597
BstNSI	RCATGY	2 cut(s)	337, 935
BstPI	GGTNACC	1 cut(s)	569
BstSCI	CCNGG	4 cut(s)	573, 579, 683, 1595
BstSFI	CTRYAG	2 cut(s)	79, 1206
BstSLI	GKGCMC	1 cut(s)	678
BstUI	CGCG	1 cut(s)	459
BstV1I	GCAGC	5 cut(s)	375, 378, 470, 836, 1097
BstV2I	GAAGAC	2 cut(s)	54, 954
BstX2I	RGATCY	3 cut(s)	527, 563, 1196
BstYI	RGATCY	3 cut(s)	527, 563, 1196
BsuRI	GGCC	4 cut(s)	237, 537, 920, 972
BtgI	CCRYGG	1 cut(s)	478
BtsCI	GGATG	4 cut(s)	847, 1147, 1219, 1294
BtsIMutI	CAGTG	2 cut(s)	1326, 1358
BveI	ACCTGC	2 cut(s)	309, 806
Cac8I	GCNNGC	4 cut(s)	211, 215, 933, 1368
CaiI	CAGNNNCTG	1 cut(s)	580
CfoI	GCGC	2 cut(s)	219, 1545
Cfr10I	RCCGGY	1 cut(s)	389
Cfr13I	GGNCC	4 cut(s)	577, 779, 1171, 1593
CsiI	ACCWGGT	1 cut(s)	1595
Csp6I	GTAC	4 cut(s)	595, 638, 956, 979
CviQI	GTAC	4 cut(s)	595, 638, 956, 979
DdeI	CTNAG	2 cut(s)	124, 941
DpnI	GATC	5 cut(s)	420, 529, 565, 1128, 1198
DpnII	GATC	5 cut(s)	418, 527, 563, 1126, 1196
DraI	TTTAAA	1 cut(s)	1072
EaeI	YGGCCR	1 cut(s)	535
Eam1104I	CTCTTC	3 cut(s)	725, 1326, 1565
EarI	CTCTTC	3 cut(s)	725, 1326, 1565
EciI	GGCGGA	1 cut(s)	1301
Ecl136II	GAGCTC	1 cut(s)	1108
Eco130I	CCWWGG	1 cut(s)	478
Eco147I	AGGCCT	1 cut(s)	237
Eco24I	GRGCYC	1 cut(s)	1110
Eco31I	GGTCTC	1 cut(s)	1394
Eco47I	GGWCC	4 cut(s)	577, 779, 1171, 1593
Eco53kI	GAGCTC	1 cut(s)	1108
Eco57I	CTGAAG	3 cut(s)	36, 749, 1350
Eco91I	GGTNACC	1 cut(s)	569
EcoICRI	GAGCTC	1 cut(s)	1108
EcoO109I	RGGNCCY	1 cut(s)	577
EcoO65I	GGTNACC	1 cut(s)	569
EcoRI	GAATTC	1 cut(s)	800
EcoRII	CCWGG	4 cut(s)	573, 579, 683, 1595
EcoT14I	CCWWGG	1 cut(s)	478
EcoT38I	GRGCYC	1 cut(s)	1110
ErhI	CCWWGG	1 cut(s)	478
FaqI	GGGAC	2 cut(s)	19, 659
FauI	CCCGC	1 cut(s)	65
FauNDI	CATATG	1 cut(s)	769
FblI	GTMKAC	1 cut(s)	1224
Fnu4HI	GCNGC	5 cut(s)	364, 367, 484, 825, 1086
FokI	GGATG	4 cut(s)	854, 1154, 1226, 1301
FriOI	GRGCYC	1 cut(s)	1110
Fsp4HI	GCNGC	5 cut(s)	364, 367, 484, 825, 1086
FspBI	CTAG	6 cut(s)	210, 302, 1020, 1314, 1377, 1388
GlaI	GCGC	2 cut(s)	218, 1544
GluI	GCNGC	5 cut(s)	364, 367, 484, 825, 1086
GsuI	CTGGAG	1 cut(s)	1382
HaeII	RGCGCY	2 cut(s)	220, 1546
HaeIII	GGCC	4 cut(s)	237, 537, 920, 972
HapII	CCGG	1 cut(s)	390
HhaI	GCGC	2 cut(s)	219, 1545
Hin6I	GCGC	2 cut(s)	217, 1543
HinP1I	GCGC	2 cut(s)	217, 1543
HincII	GTYRAC	1 cut(s)	145
HindII	GTYRAC	1 cut(s)	145
HpaII	CCGG	1 cut(s)	390
HphI	GGTGA	3 cut(s)	473, 581, 706
Hpy166II	GTNNAC	4 cut(s)	145, 595, 1153, 1225
Hpy188III	TCNNGA	4 cut(s)	302, 1377, 1446, 1489
Hpy8I	GTNNAC	4 cut(s)	145, 595, 1153, 1225
HpyCH4III	ACNGT	1 cut(s)	1157
HpyCH4IV	ACGT	1 cut(s)	954
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 185, 395, 448, 821, 1298
HpyF3I	CTNAG	2 cut(s)	124, 941
HpySE526I	ACGT	1 cut(s)	954
HspAI	GCGC	2 cut(s)	217, 1543
Kzo9I	GATC	5 cut(s)	418, 527, 563, 1126, 1196
LmnI	GCTCC	4 cut(s)	1082, 1105, 1363, 1396
Lsp1109I	GCAGC	5 cut(s)	375, 378, 470, 836, 1097
LweI	GCATC	4 cut(s)	493, 746, 832, 1279
MabI	ACCWGGT	1 cut(s)	1595
MaeI	CTAG	6 cut(s)	210, 302, 1020, 1314, 1377, 1388
MaeII	ACGT	1 cut(s)	954
MaeIII	GTNAC	3 cut(s)	99, 551, 569
MalI	GATC	5 cut(s)	420, 529, 565, 1128, 1198
MboI	GATC	5 cut(s)	418, 527, 563, 1126, 1196
MflI	RGATCY	3 cut(s)	527, 563, 1196
MhlI	GDGCHC	2 cut(s)	678, 1110
MlsI	TGGCCA	1 cut(s)	537
MluCI	AATT	5 cut(s)	800, 1218, 1267, 1405, 1532
MluNI	TGGCCA	1 cut(s)	537
MlyI	GAGTC	5 cut(s)	59, 116, 140, 1220, 1389
MmeI	TCCRAC	4 cut(s)	285, 363, 1408, 1560
Mox20I	TGGCCA	1 cut(s)	537
MscI	TGGCCA	1 cut(s)	537
MseI	TTAA	4 cut(s)	183, 378, 618, 1071
MslI	CAYNNNNRTG	2 cut(s)	106, 627
Msp20I	TGGCCA	1 cut(s)	537
MspA1I	CMGCKG	1 cut(s)	1088
MspI	CCGG	1 cut(s)	390
MspR9I	CCNGG	4 cut(s)	575, 581, 685, 1597
Mva1269I	GAATGC	1 cut(s)	909
MvaI	CCWGG	4 cut(s)	575, 581, 685, 1597
MvnI	CGCG	1 cut(s)	459
MwoI	GCNNNNNNNGC	6 cut(s)	11, 185, 395, 448, 821, 1298
NcoI	CCATGG	1 cut(s)	478
NdeI	CATATG	1 cut(s)	769
NdeII	GATC	5 cut(s)	418, 527, 563, 1126, 1196
NheI	GCTAGC	1 cut(s)	209
NlaIV	GGNNCC	1 cut(s)	1584
NmuCI	GTSAC	2 cut(s)	99, 569
NspI	RCATGY	2 cut(s)	337, 935
OliI	CACNNNNGTG	1 cut(s)	627
PaeI	GCATGC	1 cut(s)	935
PceI	AGGCCT	1 cut(s)	237
PciI	ACATGT	1 cut(s)	333
PctI	GAATGC	1 cut(s)	909
PfeI	GAWTC	7 cut(s)	155, 654, 724, 750, 1436, 1449, 1517
PflMI	CCANNNNNTGG	1 cut(s)	580
PkrI	GCNGC	5 cut(s)	365, 368, 485, 826, 1087
PleI	GAGTC	5 cut(s)	59, 116, 140, 1220, 1388
PpsI	GAGTC	5 cut(s)	59, 116, 140, 1220, 1388
PpuMI	RGGWCCY	1 cut(s)	577
PscI	ACATGT	1 cut(s)	333
Psp124BI	GAGCTC	1 cut(s)	1110
Psp5II	RGGWCCY	1 cut(s)	577
Psp6I	CCWGG	4 cut(s)	573, 579, 683, 1595
PspEI	GGTNACC	1 cut(s)	569
PspGI	CCWGG	4 cut(s)	573, 579, 683, 1595
PspN4I	GGNNCC	1 cut(s)	1584
PspPI	GGNCC	4 cut(s)	577, 779, 1171, 1593
PspPPI	RGGWCCY	1 cut(s)	577
PstI	CTGCAG	1 cut(s)	1210
PstNI	CAGNNNCTG	1 cut(s)	580
PsuI	RGATCY	3 cut(s)	527, 563, 1196
PvuII	CAGCTG	1 cut(s)	1088
RsaI	GTAC	4 cut(s)	596, 639, 957, 980
RsaNI	GTAC	4 cut(s)	595, 638, 956, 979
RseI	CAYNNNNRTG	2 cut(s)	106, 627
SacI	GAGCTC	1 cut(s)	1110
SaqAI	TTAA	4 cut(s)	183, 378, 618, 1071
SatI	GCNGC	5 cut(s)	364, 367, 484, 825, 1086
Sau3AI	GATC	5 cut(s)	418, 527, 563, 1126, 1196
Sau96I	GGNCC	4 cut(s)	577, 779, 1171, 1593
SchI	GAGTC	5 cut(s)	59, 116, 140, 1220, 1389
ScrFI	CCNGG	4 cut(s)	575, 581, 685, 1597
SduI	GDGCHC	2 cut(s)	678, 1110
SexAI	ACCWGGT	1 cut(s)	1595
SfaNI	GCATC	4 cut(s)	493, 746, 832, 1279
SfcI	CTRYAG	2 cut(s)	79, 1206
SinI	GGWCC	4 cut(s)	577, 779, 1171, 1593
SmiMI	CAYNNNNRTG	2 cut(s)	106, 627
SmlI	CTYRAG	3 cut(s)	996, 1397, 1423
SmoI	CTYRAG	3 cut(s)	996, 1397, 1423
SpeI	ACTAGT	1 cut(s)	1313
SphI	GCATGC	1 cut(s)	935
Sse9I	AATT	5 cut(s)	800, 1218, 1267, 1405, 1532
SseBI	AGGCCT	1 cut(s)	237
SsiI	CCGC	4 cut(s)	72, 442, 459, 1286
SspI	AATATT	1 cut(s)	1484
SspMI	CTAG	6 cut(s)	210, 302, 1020, 1314, 1377, 1388
SstI	GAGCTC	1 cut(s)	1110
StuI	AGGCCT	1 cut(s)	237
StyD4I	CCNGG	4 cut(s)	573, 579, 683, 1595
StyI	CCWWGG	1 cut(s)	478
TaaI	ACNGT	1 cut(s)	1157
TaiI	ACGT	1 cut(s)	957
TasI	AATT	5 cut(s)	800, 1218, 1267, 1405, 1532
TatI	WGTACW	3 cut(s)	594, 637, 978
TfiI	GAWTC	7 cut(s)	155, 654, 724, 750, 1436, 1449, 1517
Tru1I	TTAA	4 cut(s)	183, 378, 618, 1071
Tru9I	TTAA	4 cut(s)	183, 378, 618, 1071
TscAI	CASTG	2 cut(s)	1333, 1365
TseFI	GTSAC	2 cut(s)	99, 569
TseI	GCWGC	5 cut(s)	363, 366, 483, 824, 1085
Tsp45I	GTSAC	2 cut(s)	99, 569
TspDTI	ATGAA	6 cut(s)	189, 678, 793, 1230, 1428, 1545
TspRI	CASTG	2 cut(s)	1333, 1365
Van91I	CCANNNNNTGG	1 cut(s)	580
VpaK11BI	GGWCC	4 cut(s)	577, 779, 1171, 1593
XapI	RAATTY	2 cut(s)	800, 1267
XbaI	TCTAGA	2 cut(s)	301, 1376
XceI	RCATGY	2 cut(s)	337, 935
XmiI	GTMKAC	1 cut(s)	1224
XspI	CTAG	6 cut(s)	210, 302, 1020, 1314, 1377, 1388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.