Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0001382

Physical Location & Seq

Genomic Coordinates Reverse (-)

15694371 .. 15698472

Gene Structure 4102 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG149600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

ATGGAGGAGGTTGAAAGCTCTATGTCCAAGTACATGGAGTATTTGGATTACGATGACGAAGCAGTAGAAGGCTTCTTCCCTATCAATTGTAGGCGTCCCAATGCTCATGGAGGCCTTCATCGCCCTAATAACTCAACCCTTCAGCCTCTCTCTAATCGCTACCAGAAATTCTCAGCCCTAATCCGAGCTTCGCCTTTAGAGGAGTGGGAAGGCAGGTTGAATATTGGCATGTCCAACAATGTGACAACTTCCATTCGAGAGTTTATCCGAGAGATGGCCATCGGTAGAACCAAAACTACCGATAGAGCGGATCGTGCTACTGTTGAGAAGGTCTTCGATTTCAGAACCAAGTTCATTATATACAAGTTGATGGGCCGTGATGTATGCAAAGAAATAAATGGCTGCATTTCCACTGGGAAAGAAGCAAATGTTTATCATGCAACCAATTCTGATGGCCAGGAACGGGCAATCAAAGTGTTCAAAACATCTGTTCTGGACTTTAAGGACAGGGATAGATATGTACAAGGGGACTTCCGATTCAGACGCGGATACTGCAAGAACAATCCCAGGAAAATGATGAAAACATGGGCTGAGAAAGAAATGAGGAATCTGAAGAGGATAAAAGATGCAGGAATCAGATGCCCTACTGCGCATCATATAAATCATCATGTACTGGTCATGGATTTCATAGGAAAGGCAGGGTGGGCAGCACCTCTTCTGAACGATGCTGCACTATCATTAGACAAGCTACGAGAAGGTTATAGGGAGATAATAATTGCCATGCGAATGTTATATCAGAAGGCCAAGCTGGTTCATACAGACCTCAGTGAATTCAACATACTTTACTTTGAGGGGCACCTCTACATTATTGATGTTTCTCAAGCAGTTGACCTTTTTCACACTAATGCAAATGAATTCCTACGTCAAGATTGTGTCCATGTTTCTGATTTCTTTAAAAAACATGGGGTAGCAGTTATGACAACTAGGGAGCTCTTTGATTTTATAGTTGATCCAAGTATTGCTGAGGAAGCAGTGGACAGTTATCTGGATGAGGTACAACAAAAAATTGTGGACAGAGGAGATATATCTGCTGTGGATGAAATTGCTGAATCTGTATTTGTACAGGCATACATTCCAAGTACACTAAACCAGGTAATGGATGTTGAAGCAGATGTACTACGGCTAACTAGTGGTGAGGACACTGAAGACATGTACTATAAAACTATTACAGGACTAAGCCAGGCTCTTTCTAGTGTCCCACCATCTCCATGTGAAACTGAATCAGACTCTGGGAGTGATGAAGAAAACTCAATTGATTCGCATTCCTCATCTGGAGTCAAAGCACAAGAACCTCTTGGTAAAAAAGTTGCTAGAAAAGAAAACAAGAAGAAAGTCAAAGAAGAGAAGAGGGAAGCTCGGAAACACAAATTGCCAAAGGCTGTAAAGAAAAGAAGAAAAAAGTTGTCCACAGGCGGAAAGTCACGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030490 GO:0030684 GO:0030688 GO:0031323 GO:0031325 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0034708 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090070 GO:0090304 GO:1901360 GO:1902494 GO:1990234 GO:1990904 GO:2000232 GO:2000234

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

RIO1

Protein Analysis

495

Amino Acids

56.57

Weight (kDa)

8.26

Isoelectric Point (pI)

32.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RIO1	PF01163	143 - 330	4.4e-68	RIO domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24990 AT5G37350 AT5G37350
fragaria_vesca	FvH4_5g08310 FvH4_5g08310 FvH4_5g08310 FvH4_5g16770 FvH4_5g16770 FvH4_5g16770 FvH4_5g25261
malus_domestica	MD06G1142000.v1.1 MD14G1157300.v1.1
prunus_persica	Prupe.5G151200_v2.0.a1
pyrus_communis	pycom06g13180 pycom14g13080
rosa_chinensis	RchiOBHm_Chr5g0020401 RchiOBHm_Chr5g0063241 RchiOBHm_Chr5g0063291 RchiOBHm_Chr7g0190211
rosa_laevigata	RLG00000004553 RLG00000032520 RLG00000035614 RLG00000035619
rosa_multiflora	Rmu_sc0000033.1_g000014 Rmu_sc0004886.1_g000019 Rmu_sc0005045.1_g000016
rosa_roxburghii	Rroxscaffold_1G00017410 Rroxscaffold_1G00017420 Rroxscaffold_1G00017470 Rroxscaffold_3G00264780
rosa_rugosa	Rorug05G0058900 Rorug05G0058900 Rorug05G0059000 Rorug05G0059100 Rorug05G0355500 Rorug06G0503000
rosa_samantha	Rh5AG149600 Rh5AG415200 Rh5AG415300 Rh5AG415500 Rh5BG149000 Rh5BG430400 Rh5CG160500 Rh5CG453800 Rh5DG147800 Rh5DG444000 Rh7AG108300 Rh7BG110900 Rh7CG113300 Rh7DG111700
rosa_wichuraiana	Rw5G013250 Rw5G039050 Rw7G009390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	651
Acc36I	ACCTGC	1 cut(s)	204
AccB1I	GGYRCC	1 cut(s)	855
AccB7I	CCANNNNNTGG	1 cut(s)	1156
AccBSI	CCGCTC	1 cut(s)	308
AccII	CGCG	1 cut(s)	546
AciI	CCGC	3 cut(s)	308, 546, 1473
AclWI	GGATC	2 cut(s)	318, 1004
AcoI	YGGCCR	2 cut(s)	276, 454
AcsI	RAATTY	3 cut(s)	167, 830, 914
AcuI	CTGAAG	3 cut(s)	125, 632, 1224
AcyI	GRCGYC	1 cut(s)	94
AfaI	GTAC	8 cut(s)	32, 522, 672, 1056, 1122, 1141, 1176, 1214
AfiI	CCNNNNNNNGG	3 cut(s)	274, 463, 1156
AflIII	ACRYGT	1 cut(s)	1209
AgsI	TTSAA	5 cut(s)	14, 220, 481, 835, 1166
AhlI	ACTAGT	1 cut(s)	1187
AjnI	CCWGG	4 cut(s)	456, 566, 1149, 1239
AluBI	AGCT	6 cut(s)	18, 188, 748, 808, 991, 1415
AluI	AGCT	6 cut(s)	18, 188, 748, 808, 991, 1415
Alw21I	GWGCWC	1 cut(s)	993
AlwI	GGATC	2 cut(s)	318, 1004
AlwNI	CAGNNNCTG	1 cut(s)	1289
AoxI	GGCC	5 cut(s)	112, 276, 373, 454, 801
ApeKI	GCWGC	3 cut(s)	402, 707, 728
ApoI	RAATTY	3 cut(s)	167, 830, 914
Asp700I	GAANNNNTTC	1 cut(s)	332
AspLEI	GCGC	1 cut(s)	652
AspS9I	GGNCC	1 cut(s)	373
AsuHPI	GGTGA	1 cut(s)	1205
BaeGI	GKGCMC	1 cut(s)	858
BalI	TGGCCA	2 cut(s)	278, 456
BanI	GGYRCC	1 cut(s)	855
BanII	GRGCYC	1 cut(s)	993
BarI	GAAGNNNNNNTAC	2 cut(s)	1158, 1190
BbsI	GAAGAC	2 cut(s)	325, 1212
Bbv12I	GWGCWC	1 cut(s)	993
BbvCI	CCTCAGC	1 cut(s)	1023
BbvI	GCAGC	3 cut(s)	389, 715, 719
BccI	CCATC	5 cut(s)	268, 287, 364, 446, 1270
BceAI	ACGGC	2 cut(s)	360, 1196
BciT130I	CCWGG	4 cut(s)	458, 568, 1151, 1241
BciVI	GTATCC	1 cut(s)	542
BcuI	ACTAGT	1 cut(s)	1187
BfaI	CTAG	4 cut(s)	984, 1188, 1251, 1371
BfuAI	ACCTGC	1 cut(s)	204
BfuI	GTATCC	1 cut(s)	542
BisI	GCNGC	3 cut(s)	403, 708, 729
BlsI	GCNGC	3 cut(s)	404, 709, 730
Bme1390I	CCNGG	4 cut(s)	458, 568, 1151, 1241
BmgT120I	GGNCC	1 cut(s)	373
BmiI	GGNNCC	1 cut(s)	857
BmrFI	CCNGG	4 cut(s)	458, 568, 1151, 1241
BmrI	ACTGGG	1 cut(s)	423
BmsI	GCATC	4 cut(s)	616, 629, 661, 715
BmuI	ACTGGG	1 cut(s)	423
BpiI	GAAGAC	2 cut(s)	325, 1212
BplI	GAGNNNNNCTC	2 cut(s)	1399, 1431
BpmI	CTGGAG	1 cut(s)	1353
Bpu10I	CCTNAGC	1 cut(s)	1023
BpuEI	CTTGAG	1 cut(s)	864
BsaBI	GATNNNNATC	1 cut(s)	278
BsaHI	GRCGYC	1 cut(s)	94
BsaJI	CCNNGG	1 cut(s)	566
Bsc4I	CCNNNNNNNGG	3 cut(s)	274, 463, 1156
Bse1I	ACTGG	2 cut(s)	418, 678
Bse8I	GATNNNNATC	1 cut(s)	278
BseBI	CCWGG	4 cut(s)	458, 568, 1151, 1241
BseDI	CCNNGG	1 cut(s)	566
BseGI	GGATG	3 cut(s)	1054, 1102, 1165
BseJI	GATNNNNATC	1 cut(s)	278
BseLI	CCNNNNNNNGG	3 cut(s)	274, 463, 1156
BseMII	CTCAG	4 cut(s)	186, 582, 838, 1014
BseNI	ACTGG	2 cut(s)	418, 678
BseRI	GAGGAG	3 cut(s)	20, 215, 1092
BseSI	GKGCMC	1 cut(s)	858
BseXI	GCAGC	3 cut(s)	389, 715, 719
BsgI	GTGCAG	1 cut(s)	714
Bsh1236I	CGCG	1 cut(s)	546
BshFI	GGCC	5 cut(s)	114, 278, 375, 456, 803
BshNI	GGYRCC	1 cut(s)	855
BsiHKAI	GWGCWC	1 cut(s)	993
BslFI	GGGAC	3 cut(s)	81, 542, 1241
BslI	CCNNNNNNNGG	3 cut(s)	274, 463, 1156
BsmFI	GGGAC	3 cut(s)	81, 542, 1241
BsmI	GAATGC	1 cut(s)	1321
BsnI	GGCC	5 cut(s)	114, 278, 375, 456, 803
Bsp1286I	GDGCHC	2 cut(s)	858, 993
Bsp1407I	TGTACA	2 cut(s)	520, 1120
Bsp143I	GATC	2 cut(s)	310, 1009
BspACI	CCGC	3 cut(s)	308, 546, 1473
BspANI	GGCC	5 cut(s)	114, 278, 375, 456, 803
BspCNI	CTCAG	4 cut(s)	185, 583, 837, 1015
BspFNI	CGCG	1 cut(s)	546
BspLI	GGNNCC	1 cut(s)	857
BspMI	ACCTGC	1 cut(s)	204
BspPI	GGATC	2 cut(s)	318, 1004
BspT107I	GGYRCC	1 cut(s)	855
BsrBI	CCGCTC	1 cut(s)	308
BsrGI	TGTACA	2 cut(s)	520, 1120
BsrI	ACTGG	2 cut(s)	418, 678
BssECI	CCNNGG	1 cut(s)	566
BssMI	GATC	2 cut(s)	310, 1009
BssNI	GRCGYC	1 cut(s)	94
Bst2UI	CCWGG	4 cut(s)	458, 568, 1151, 1241
Bst4CI	ACNGT	3 cut(s)	322, 1040, 1485
Bst6I	CTCTTC	4 cut(s)	608, 720, 1395, 1400
BstACI	GRCGYC	1 cut(s)	94
BstAUI	TGTACA	2 cut(s)	520, 1120
BstDEI	CTNAG	5 cut(s)	172, 591, 824, 1023, 1235
BstF5I	GGATG	3 cut(s)	1054, 1102, 1165
BstFNI	CGCG	1 cut(s)	546
BstHHI	GCGC	1 cut(s)	652
BstKTI	GATC	2 cut(s)	313, 1012
BstMBI	GATC	2 cut(s)	310, 1009
BstMWI	GCNNNNNNNGC	5 cut(s)	120, 314, 552, 704, 1028
BstNI	CCWGG	4 cut(s)	458, 568, 1151, 1241
BstNSI	RCATGY	2 cut(s)	232, 1213
BstSCI	CCNGG	4 cut(s)	456, 566, 1149, 1239
BstSLI	GKGCMC	1 cut(s)	858
BstUI	CGCG	1 cut(s)	546
BstV1I	GCAGC	3 cut(s)	389, 715, 719
BstV2I	GAAGAC	2 cut(s)	325, 1212
BstXI	CCANNNNNNTGG	1 cut(s)	34
BsuI	GTATCC	1 cut(s)	542
BsuRI	GGCC	5 cut(s)	114, 278, 375, 456, 803
BtgZI	GCGATG	1 cut(s)	104
BtsCI	GGATG	3 cut(s)	1054, 1102, 1165
BtsI	GCAGTG	1 cut(s)	1038
BtsIMutI	CAGTG	4 cut(s)	411, 832, 1038, 1200
BveI	ACCTGC	1 cut(s)	204
CaiI	CAGNNNCTG	1 cut(s)	1289
CfoI	GCGC	1 cut(s)	652
Cfr13I	GGNCC	1 cut(s)	373
CseI	GACGC	2 cut(s)	83, 552
CsiI	ACCWGGT	1 cut(s)	1149
Csp6I	GTAC	8 cut(s)	31, 521, 671, 1055, 1121, 1140, 1175, 1213
CviQI	GTAC	8 cut(s)	31, 521, 671, 1055, 1121, 1140, 1175, 1213
DdeI	CTNAG	5 cut(s)	172, 591, 824, 1023, 1235
DpnI	GATC	2 cut(s)	312, 1011
DpnII	GATC	2 cut(s)	310, 1009
DraI	TTTAAA	1 cut(s)	955
EaeI	YGGCCR	2 cut(s)	276, 454
Eam1104I	CTCTTC	4 cut(s)	608, 720, 1395, 1400
EarI	CTCTTC	4 cut(s)	608, 720, 1395, 1400
EciI	GGCGGA	1 cut(s)	1488
Ecl136II	GAGCTC	1 cut(s)	991
Eco147I	AGGCCT	1 cut(s)	114
Eco24I	GRGCYC	1 cut(s)	993
Eco53kI	GAGCTC	1 cut(s)	991
Eco57I	CTGAAG	3 cut(s)	125, 632, 1224
EcoICRI	GAGCTC	1 cut(s)	991
EcoRI	GAATTC	2 cut(s)	830, 914
EcoRII	CCWGG	4 cut(s)	456, 566, 1149, 1239
EcoT38I	GRGCYC	1 cut(s)	993
FalI	AAGNNNNNCTT	2 cut(s)	1338, 1370
FaqI	GGGAC	3 cut(s)	81, 542, 1241
Fnu4HI	GCNGC	3 cut(s)	403, 708, 729
FokI	GGATG	3 cut(s)	1061, 1109, 1172
FriOI	GRGCYC	1 cut(s)	993
Fsp4HI	GCNGC	3 cut(s)	403, 708, 729
FspBI	CTAG	4 cut(s)	984, 1188, 1251, 1371
FspI	TGCGCA	1 cut(s)	651
GlaI	GCGC	1 cut(s)	651
GluI	GCNGC	3 cut(s)	403, 708, 729
GsuI	CTGGAG	1 cut(s)	1353
HaeIII	GGCC	5 cut(s)	114, 278, 375, 456, 803
HgaI	GACGC	2 cut(s)	83, 552
HhaI	GCGC	1 cut(s)	652
Hin1I	GRCGYC	1 cut(s)	94
Hin6I	GCGC	1 cut(s)	650
HinP1I	GCGC	1 cut(s)	650
HincII	GTYRAC	1 cut(s)	889
HindII	GTYRAC	1 cut(s)	889
HinfI	GANTC	8 cut(s)	537, 607, 633, 1109, 1280, 1286, 1316, 1335
HphI	GGTGA	1 cut(s)	1205
Hpy166II	GTNNAC	5 cut(s)	889, 1036, 1072, 1142, 1467
Hpy188III	TCNNGA	5 cut(s)	257, 494, 926, 1046, 1332
Hpy8I	GTNNAC	5 cut(s)	889, 1036, 1072, 1142, 1467
HpyAV	CCTTC	7 cut(s)	62, 125, 149, 203, 322, 749, 793
HpyCH4III	ACNGT	3 cut(s)	322, 1040, 1485
HpyCH4IV	ACGT	1 cut(s)	922
HpyCH4V	TGCA	7 cut(s)	387, 405, 440, 555, 629, 731, 908
HpyF10VI	GCNNNNNNNGC	5 cut(s)	120, 314, 552, 704, 1028
HpyF3I	CTNAG	5 cut(s)	172, 591, 824, 1023, 1235
HpySE526I	ACGT	1 cut(s)	922
Hsp92I	GRCGYC	1 cut(s)	94
HspAI	GCGC	1 cut(s)	650
Kzo9I	GATC	2 cut(s)	310, 1009
LmnI	GCTCC	1 cut(s)	988
Lsp1109I	GCAGC	3 cut(s)	389, 715, 719
LweI	GCATC	4 cut(s)	616, 629, 661, 715
MabI	ACCWGGT	1 cut(s)	1149
MaeI	CTAG	4 cut(s)	984, 1188, 1251, 1371
MaeII	ACGT	1 cut(s)	922
MaeIII	GTNAC	2 cut(s)	241, 1479
MalI	GATC	2 cut(s)	312, 1011
MbiI	CCGCTC	1 cut(s)	308
MboI	GATC	2 cut(s)	310, 1009
MfeI	CAATTG	2 cut(s)	85, 1311
MhlI	GDGCHC	2 cut(s)	858, 993
MlsI	TGGCCA	2 cut(s)	278, 456
MluNI	TGGCCA	2 cut(s)	278, 456
MlyI	GAGTC	2 cut(s)	1280, 1344
MmeI	TCCRAC	1 cut(s)	258
Mox20I	TGGCCA	2 cut(s)	278, 456
MroXI	GAANNNNTTC	1 cut(s)	332
MscI	TGGCCA	2 cut(s)	278, 456
MseI	TTAA	2 cut(s)	501, 954
MslI	CAYNNNNRTG	3 cut(s)	785, 903, 1267
Msp20I	TGGCCA	2 cut(s)	278, 456
MspR9I	CCNGG	4 cut(s)	458, 568, 1151, 1241
MunI	CAATTG	2 cut(s)	85, 1311
Mva1269I	GAATGC	1 cut(s)	1321
MvaI	CCWGG	4 cut(s)	458, 568, 1151, 1241
MvnI	CGCG	1 cut(s)	546
MwoI	GCNNNNNNNGC	5 cut(s)	120, 314, 552, 704, 1028
NdeII	GATC	2 cut(s)	310, 1009
NlaIV	GGNNCC	1 cut(s)	857
NmuCI	GTSAC	2 cut(s)	241, 1479
NsbI	TGCGCA	1 cut(s)	651
NspI	RCATGY	2 cut(s)	232, 1213
PceI	AGGCCT	1 cut(s)	114
PciI	ACATGT	1 cut(s)	1209
PctI	GAATGC	1 cut(s)	1321
PdmI	GAANNNNTTC	1 cut(s)	332
PfeI	GAWTC	6 cut(s)	537, 607, 633, 1109, 1280, 1316
PflMI	CCANNNNNTGG	1 cut(s)	1156
PkrI	GCNGC	3 cut(s)	404, 709, 730
PleI	GAGTC	2 cut(s)	1280, 1343
PpsI	GAGTC	2 cut(s)	1280, 1343
PscI	ACATGT	1 cut(s)	1209
Psp124BI	GAGCTC	1 cut(s)	993
Psp6I	CCWGG	4 cut(s)	456, 566, 1149, 1239
PspGI	CCWGG	4 cut(s)	456, 566, 1149, 1239
PspN4I	GGNNCC	1 cut(s)	857
PspPI	GGNCC	1 cut(s)	373
PsrI	GAACNNNNNNTAC	2 cut(s)	280, 312
PstNI	CAGNNNCTG	1 cut(s)	1289
RsaI	GTAC	8 cut(s)	32, 522, 672, 1056, 1122, 1141, 1176, 1214
RsaNI	GTAC	8 cut(s)	31, 521, 671, 1055, 1121, 1140, 1175, 1213
RseI	CAYNNNNRTG	3 cut(s)	785, 903, 1267
SacI	GAGCTC	1 cut(s)	993
SaqAI	TTAA	2 cut(s)	501, 954
SatI	GCNGC	3 cut(s)	403, 708, 729
Sau3AI	GATC	2 cut(s)	310, 1009
Sau96I	GGNCC	1 cut(s)	373
SchI	GAGTC	2 cut(s)	1280, 1344
ScrFI	CCNGG	4 cut(s)	458, 568, 1151, 1241
SduI	GDGCHC	2 cut(s)	858, 993
SexAI	ACCWGGT	1 cut(s)	1149
SfaNI	GCATC	4 cut(s)	616, 629, 661, 715
SmiMI	CAYNNNNRTG	3 cut(s)	785, 903, 1267
SmlI	CTYRAG	1 cut(s)	879
SmoI	CTYRAG	1 cut(s)	879
SpeI	ACTAGT	1 cut(s)	1187
SseBI	AGGCCT	1 cut(s)	114
SsiI	CCGC	3 cut(s)	308, 546, 1473
SspI	AATATT	1 cut(s)	223
SspMI	CTAG	4 cut(s)	984, 1188, 1251, 1371
SstI	GAGCTC	1 cut(s)	993
StuI	AGGCCT	1 cut(s)	114
StyD4I	CCNGG	4 cut(s)	456, 566, 1149, 1239
TaaI	ACNGT	3 cut(s)	322, 1040, 1485
TaiI	ACGT	1 cut(s)	925
TaqI	TCGA	2 cut(s)	256, 336
TatI	WGTACW	7 cut(s)	30, 520, 670, 1120, 1139, 1174, 1212
TfiI	GAWTC	6 cut(s)	537, 607, 633, 1109, 1280, 1316
Tru1I	TTAA	2 cut(s)	501, 954
Tru9I	TTAA	2 cut(s)	501, 954
TscAI	CASTG	4 cut(s)	418, 832, 1038, 1207
TseFI	GTSAC	2 cut(s)	241, 1479
TseI	GCWGC	3 cut(s)	402, 707, 728
Tsp45I	GTSAC	2 cut(s)	241, 1479
TspDTI	ATGAA	8 cut(s)	107, 343, 593, 676, 803, 927, 1113, 1314
TspRI	CASTG	4 cut(s)	418, 832, 1038, 1207
Van91I	CCANNNNNTGG	1 cut(s)	1156
XapI	RAATTY	3 cut(s)	167, 830, 914
XceI	RCATGY	2 cut(s)	232, 1213
XmnI	GAANNNNTTC	1 cut(s)	332
XspI	CTAG	4 cut(s)	984, 1188, 1251, 1371

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.