AT5G50780

Exhibits ATPase activity. Binds DNA RNA in a non- specific manner and exhibits endonuclease activity. Probably involved in DNA repair. Involved in RNA-directed DNA methylation (RdDM) as a component of the RdDM machinery and required for gene silencing. May also be involved in the regulation of chromatin architecture to maintain gene silencing. Together with

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
20650086 .. 20655401
5316 bp
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UTR
Exon/CDS
Intron
AT5G50780.2

Sequence Viewer

Length: 2460 bp
ATGGAGCCTATCGTGAAGCAAGAGAATCCGGTAACTACTTCTACTCTCTCCACATGGAAACCCGCCGCTAGGAACAAAACCATTCCGCCGCCAGAATCCGTCATCGAACTTAGTAGTAGCAACGAAGGATCCGAGTTAGGCGAAAATCTCGACGAAATCGCTGAGATTCAAAGCGTAGACCGAACCGGTGGTGATGATGTTTCTGGAACGAAGAGAGCGCGAAGTGATTCTATAGCTTCACCGGCGAAGAGACTAGCGGTTATGATTCCGGATGATGACGAAGAGTTTTTACTATCGACTACTTCTGGACAAGCGATTTTGGCTCTTCCGGCTACGCCTTGTAACGTTGTGGCGGCGCCTTCGTCTTGGGGAAGTTGTAAGCAGTTTTGGAAAGCTGGTGATTATGAAGGAACATCTGGTGGTGATTGGGAAGTTTCTGCAGGTGGCTTTGATCATGTGAGAGTACATCCTAAGTTCCTGCATTCCAATGCAACTAGTCACAAATGGTCTCTTGGAGCTTTTGCTGAGCTTTTGGACAATGCTTTAGATGAGGTTCGTAGTGGAGCTACATTTGTTAATGTAGACATGATCCAGAACAGGAAAGATGGAAGCAAGATGATCTTAATTGAGGACAACGGAGGTGGGATGAATCCTGAAAAGATGCGGCATTGTATGTCTCTAGGATATTCTGCCAAGAGTAAACTTGCAGATACCATTGGACAATATGGTAATGGATTCAAGACTAGTACAATGAGGCTTGGAGCTGATGTCATTGTTTTCTCACGTTGCCTTGGAAAAGATGGAAAGAGCTCGACGCAGAGCATTGGCCTTCTATCATATACATTTCTAAAGAGCACGGGGAAAGAGGACATAGTTGTACCCATGCTTGACTATGAAAGAAGAGATTCTGAATGGTGTCCAATAACGAGGTCTTCGGTTAGTGATTGGGAGAAAAATGTGGAAACAGTAGTTCAATGGTCGCCTTACGCTACTGAAGAAGAACTTCTTTGTCAGTTTAATCTAATGAAGAAACATGGCACAAGGATAATCATATATAACCTCTGGGAAGATGACGAAGGAATGCTAGAACTTGATTTTGACACTGATCCACATGATATCCAGCTTCGAGGGGTCAATCGGGATGATAAAAATATTGTTATGGCTTCTCAATTCCCTAACTCTAGACATTACCTGACGTACAAGCACTCACTCAGGAGTTACGCCTCTATTCTCTACCTAAAGATTTCACATGAGTTCCGTATCATTCTCCGAGGAAAAGATGTTGAGCATCACAACATAGTAAATGACATGATGCAGACCGAAAAAATTACTTACCGGCCAAAAGAAGCGGCTGATGGATGCGCTAAGTACTCAAATCTTTATAACTTAAAAATTTGGCTGCTTGTGCTACATGTTTCACAGTTGTCTGCTGTTGTGACCATTGGATTTGTGAAGGATGCAAAACATCATGTGGATGTGCAAGGCTTCAATGTTTACCACAAAAATCGCCTTATTAAGCCATTTTGGAGGATATGGAATGCGGCAGGAAGTGATGGTCGTGGGGTCATAGGTGTCTTGGAAGCTAATTTTGTTGAGCCTGCTCATGATAAGCAAGGGTTCGAGCGCACAACAGTTTTGTCTAGACTCGAGGCACGTCTACTTCATATGCAGAAGGATTATTGGAGATCTAAATGTCACAAAATTGGATATGCGAAAAGGCAAGGCAGAAAGTCTGCTAAGGATACTGAAAAGGACACTGAAGACAGAGAATCGTCACCAGAATTTGATCCTAAAGGATCTGCCTCATCGAGGAAAAGGACCGTTCCTTCGAGCTTTAAAACTCCAACTGCTGCTCCGAGGTTTAATACTCCAACCGCAGCTTCAGAAAAATTCAACCCAAGATCAAATGTGAATGGCGGAGGAAAAGGATCTGTGAAAGTTTCTAAAGACATCGGGTATAAATCATCAGAGAAAGGTGGTAAACTTGGAAACTCCTTTTCCAAATCTAACAAACGAGCAAAGCCTCAAGGAGCCCGTGCTGTGGAGGTTACAAATAGTGATGATGACTATGATTGTGATTCTTCACCCGAAAGAAATGTTACTGAGCTGCCTGGGAAGAGTTCTGAACTACCCAAGCCTCAGTCTGGTCCGCGTACCCTGAGTCAATTGGAACAAGAGAATAATGAGTTAAGAGAGAGGCTCGATAAAAAAGAAGAAGTTTTCCTGTTACTGCAAAAGGACCTGCGACGTGAGAGAGAGCTTCGCAAGACACTTGAAGCTGAGGTTGAAACATTAAAGAACAAGTTAAAAGAAATGGACAAAGAGCAAGCGAGTTTAATCGATGTTTTCGCAGAGGATAGAGACAGACGCGACAAGGAGGAAGAAAATCTCAGAATTAAGCTAGAGGAGGCGTCGAACACAATCCAAAAGTTGATAGATGGAAAAGCTCGAGGCAGATAA

Protein Analysis

819

Amino Acids

91.92

Weight (kDa)

7.05

Isoelectric Point (pI)

43.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HATPase_c_3 PF13589 172 - 292 8.9e-18 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Morc6_S5 PF17942 402 - 546 6.8e-61 Morc6 ribosomal protein S5 domain 2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1383
AarI CACCTGC 1 cut(s) 431
Acc36I ACCTGC 2 cut(s) 431, 2250
AccB1I GGYRCC 1 cut(s) 355
AccI GTMKAC 3 cut(s) 177, 582, 1657
AccII CGCG 3 cut(s) 220, 2152, 2370
AccIII TCCGGA 1 cut(s) 268
AclI AACGTT 1 cut(s) 345
AclWI GGATC 7 cut(s) 123, 136, 583, 1100, 1781, 1804, 1936
AcoI YGGCCR 1 cut(s) 1337
AcsI RAATTY 3 cut(s) 1392, 1781, 1889
AcuI CTGAAG 3 cut(s) 1014, 1779, 1866
AcyI GRCGYC 2 cut(s) 356, 2411
AfaI GTAC 6 cut(s) 465, 748, 879, 1199, 1370, 2155
AfiI CCNNNNNNNGG 4 cut(s) 69, 1809, 2041, 2144
AflIII ACRYGT 1 cut(s) 1411
AgeI ACCGGT 1 cut(s) 185
AgsI TTSAA 7 cut(s) 170, 739, 974, 1489, 1894, 2276, 2288
AhlI ACTAGT 2 cut(s) 494, 743
AjiI CACGTC 2 cut(s) 1655, 2249
AjnI CCWGG 1 cut(s) 2110
AjuI GAANNNNNNNTTGG 2 cut(s) 1864, 1896
Alw21I GWGCWC 2 cut(s) 812, 857
Alw26I GTCTC 4 cut(s) 244, 513, 681, 2355
AlwI GGATC 7 cut(s) 123, 136, 583, 1100, 1781, 1804, 1936
Ama87I CYCGRG 2 cut(s) 1646, 2448
Aor13HI TCCGGA 1 cut(s) 268
AoxI GGCC 2 cut(s) 826, 1337
ApeKI GCWGC 4 cut(s) 1399, 1850, 1877, 2107
ApoI RAATTY 3 cut(s) 1392, 1781, 1889
ArsI GACNNNNNNTTYG 2 cut(s) 1810, 1842
AsiGI ACCGGT 1 cut(s) 185
Asp700I GAANNNNTTC 3 cut(s) 226, 904, 1002
AspLEI GCGC 4 cut(s) 220, 358, 1364, 1626
AspS9I GGNCC 3 cut(s) 1818, 2147, 2239
AsuHPI GGTGA 6 cut(s) 203, 231, 410, 434, 1767, 2076
AvaI CYCGRG 2 cut(s) 1646, 2448
AvaII GGWCC 3 cut(s) 1818, 2147, 2239
BamHI GGATCC 1 cut(s) 128
BanI GGYRCC 1 cut(s) 355
BanII GRGCYC 2 cut(s) 812, 2035
BarI GAAGNNNNNNTAC 2 cut(s) 273, 305
BbsI GAAGAC 2 cut(s) 924, 1767
Bbv12I GWGCWC 2 cut(s) 812, 857
BbvCI CCTCAGC 1 cut(s) 2280
BbvI GCAGC 4 cut(s) 1386, 1837, 1889, 2094
BccI CCATC 5 cut(s) 599, 794, 1349, 1547, 2432
BciT130I CCWGG 1 cut(s) 2112
BciVI GTATCC 1 cut(s) 1735
BclI TGATCA 1 cut(s) 451
BcoDI GTCTC 4 cut(s) 244, 513, 681, 2355
BcuI ACTAGT 2 cut(s) 494, 743
BfaI CTAG 9 cut(s) 69, 254, 495, 680, 744, 1085, 1182, 1641, 2402
BfmI CTRYAG 2 cut(s) 231, 438
BfoI RGCGCY 1 cut(s) 359
BfuAI ACCTGC 2 cut(s) 431, 2250
BfuI GTATCC 1 cut(s) 1735
BglII AGATCT 1 cut(s) 1685
BlpI GCTNAGC 1 cut(s) 525
BmcAI AGTACT 1 cut(s) 1370
Bme1390I CCNGG 1 cut(s) 2112
Bme18I GGWCC 3 cut(s) 1818, 2147, 2239
BmeT110I CYCGRG 2 cut(s) 1646, 2448
BmgBI CACGTC 2 cut(s) 1655, 2249
BmgT120I GGNCC 3 cut(s) 1818, 2147, 2239
BmiI GGNNCC 4 cut(s) 6, 130, 357, 2032
BmrFI CCNGG 1 cut(s) 2112
BmsI GCATC 5 cut(s) 651, 1297, 1302, 1349, 1447
BpiI GAAGAC 2 cut(s) 924, 1767
BplI GAGNNNNNCTC 2 cut(s) 2184, 2216
Bpu10I CCTNAGC 2 cut(s) 1737, 2280
Bpu1102I GCTNAGC 1 cut(s) 525
BpuEI CTTGAG 1 cut(s) 2010
Bsa29I ATCGAT 1 cut(s) 2340
BsaHI GRCGYC 2 cut(s) 356, 2411
BsaI GGTCTC 1 cut(s) 513
BsaJI CCNNGG 4 cut(s) 790, 1270, 1856, 2111
BsaWI WCCGGW 3 cut(s) 28, 185, 268
BsaXI ACNNNNNCTCC 4 cut(s) 753, 783, 1837, 1867
Bsc4I CCNNNNNNNGG 4 cut(s) 69, 1809, 2041, 2144
Bse118I RCCGGY 3 cut(s) 185, 241, 1335
BseAI TCCGGA 1 cut(s) 268
BseBI CCWGG 1 cut(s) 2112
BseCI ATCGAT 1 cut(s) 2340
BseDI CCNNGG 4 cut(s) 790, 1270, 1856, 2111
BseGI GGATG 7 cut(s) 277, 466, 651, 1147, 1364, 1462, 1480
BseLI CCNNNNNNNGG 4 cut(s) 69, 1809, 2041, 2144
BseMII CTCAG 8 cut(s) 153, 516, 1225, 2094, 2150, 2153, 2271, 2404
BseRI GAGGAG 1 cut(s) 2420
BseXI GCAGC 4 cut(s) 1386, 1837, 1889, 2094
Bsh1236I CGCG 3 cut(s) 220, 2152, 2370
BshFI GGCC 2 cut(s) 828, 1339
BshNI GGYRCC 1 cut(s) 355
BshTI ACCGGT 1 cut(s) 185
BshVI ATCGAT 1 cut(s) 2340
BsiHKAI GWGCWC 2 cut(s) 812, 857
BsiHKCI CYCGRG 2 cut(s) 1646, 2448
BsiSI CCGG 6 cut(s) 29, 186, 242, 269, 329, 1336
BslI CCNNNNNNNGG 4 cut(s) 69, 1809, 2041, 2144
BsmAI GTCTC 4 cut(s) 244, 513, 681, 2355
BsmI GAATGC 3 cut(s) 481, 1086, 1543
BsnI GGCC 2 cut(s) 828, 1339
Bso31I GGTCTC 1 cut(s) 513
BsoBI CYCGRG 2 cut(s) 1646, 2448
Bsp1286I GDGCHC 3 cut(s) 812, 857, 2035
Bsp13I TCCGGA 1 cut(s) 268
Bsp1720I GCTNAGC 1 cut(s) 525
BspANI GGCC 2 cut(s) 828, 1339
BspCNI CTCAG 8 cut(s) 154, 517, 1224, 2095, 2151, 2152, 2272, 2403
BspDI ATCGAT 1 cut(s) 2340
BspEI TCCGGA 1 cut(s) 268
BspFNI CGCG 3 cut(s) 220, 2152, 2370
BspHI TCATGA 1 cut(s) 1603
BspLI GGNNCC 4 cut(s) 6, 130, 357, 2032
BspMAI CTGCAG 1 cut(s) 442
BspMI ACCTGC 2 cut(s) 431, 2250
BspPI GGATC 7 cut(s) 123, 136, 583, 1100, 1781, 1804, 1936
BspQI GCTCTTC 1 cut(s) 330
BspT107I GGYRCC 1 cut(s) 355
BspTNI GGTCTC 1 cut(s) 513
BsrFI RCCGGY 3 cut(s) 185, 241, 1335
BssAI RCCGGY 3 cut(s) 185, 241, 1335
BssECI CCNNGG 4 cut(s) 790, 1270, 1856, 2111
BssNI GRCGYC 2 cut(s) 356, 2411
BssT1I CCWWGG 1 cut(s) 790
Bst2UI CCWGG 1 cut(s) 2112
Bst4CI ACNGT 4 cut(s) 967, 1422, 1633, 1822
Bst6I CTCTTC 6 cut(s) 206, 242, 276, 330, 895, 2111
BstACI GRCGYC 2 cut(s) 356, 2411
BstC8I GCNNGC 2 cut(s) 1599, 2328
BstENI CCTNNNNNAGG 1 cut(s) 1807
BstF5I GGATG 7 cut(s) 277, 466, 651, 1147, 1364, 1462, 1480
BstFNI CGCG 3 cut(s) 220, 2152, 2370
BstH2I RGCGCY 1 cut(s) 359
BstHHI GCGC 4 cut(s) 220, 358, 1364, 1626
BstMAI GTCTC 4 cut(s) 244, 513, 681, 2355
BstMWI GCNNNNNNNGC 4 cut(s) 242, 320, 329, 1405
BstNI CCWGG 1 cut(s) 2112
BstNSI RCATGY 1 cut(s) 1415
BstSCI CCNGG 1 cut(s) 2110
BstSFI CTRYAG 2 cut(s) 231, 438
BstUI CGCG 3 cut(s) 220, 2152, 2370
BstV1I GCAGC 4 cut(s) 1386, 1837, 1889, 2094
BstV2I GAAGAC 2 cut(s) 924, 1767
BstX2I RGATCY 4 cut(s) 128, 1685, 1796, 1928
BstYI RGATCY 4 cut(s) 128, 1685, 1796, 1928
Bsu15I ATCGAT 1 cut(s) 2340
BsuI GTATCC 1 cut(s) 1735
BsuRI GGCC 2 cut(s) 828, 1339
BsuTUI ATCGAT 1 cut(s) 2340
BtrI CACGTC 2 cut(s) 1655, 2249
BtsCI GGATG 7 cut(s) 277, 466, 651, 1147, 1364, 1462, 1480
BtsIMutI CAGTG 2 cut(s) 1101, 1755
BveI ACCTGC 2 cut(s) 431, 2250
Cac8I GCNNGC 2 cut(s) 1599, 2328
CciI TCATGA 1 cut(s) 1603
CfoI GCGC 4 cut(s) 220, 358, 1364, 1626
Cfr10I RCCGGY 3 cut(s) 185, 241, 1335
Cfr13I GGNCC 3 cut(s) 1818, 2147, 2239
ClaI ATCGAT 1 cut(s) 2340
CseI GACGC 3 cut(s) 823, 2376, 2400
Csp6I GTAC 6 cut(s) 464, 747, 878, 1198, 1369, 2154
CspAI ACCGGT 1 cut(s) 185
CspCI CAANNNNNGTGG 2 cut(s) 622, 657
CviQI GTAC 6 cut(s) 464, 747, 878, 1198, 1369, 2154
DinI GGCGCC 1 cut(s) 357
DraI TTTAAA 1 cut(s) 1837
EaeI YGGCCR 1 cut(s) 1337
Eam1104I CTCTTC 6 cut(s) 206, 242, 276, 330, 895, 2111
EarI CTCTTC 6 cut(s) 206, 242, 276, 330, 895, 2111
EciI GGCGGA 2 cut(s) 75, 1932
Ecl136II GAGCTC 1 cut(s) 810
Eco130I CCWWGG 1 cut(s) 790
Eco24I GRGCYC 2 cut(s) 812, 2035
Eco31I GGTCTC 1 cut(s) 513
Eco32I GATATC 1 cut(s) 1117
Eco47I GGWCC 3 cut(s) 1818, 2147, 2239
Eco53kI GAGCTC 1 cut(s) 810
Eco57I CTGAAG 3 cut(s) 1014, 1779, 1866
Eco88I CYCGRG 2 cut(s) 1646, 2448
EcoICRI GAGCTC 1 cut(s) 810
EcoNI CCTNNNNNAGG 1 cut(s) 1807
EcoO109I RGGNCCY 1 cut(s) 2239
EcoRII CCWGG 1 cut(s) 2110
EcoRV GATATC 1 cut(s) 1117
EcoT14I CCWWGG 1 cut(s) 790
EcoT38I GRGCYC 2 cut(s) 812, 2035
EgeI GGCGCC 1 cut(s) 357
EheI GGCGCC 1 cut(s) 357
ErhI CCWWGG 1 cut(s) 790
FalI AAGNNNNNCTT 6 cut(s) 605, 637, 987, 1019, 990, 1022
FauI CCCGC 1 cut(s) 70
FauNDI CATATG 1 cut(s) 1665
FbaI TGATCA 1 cut(s) 451
FblI GTMKAC 3 cut(s) 177, 582, 1657
FokI GGATG 7 cut(s) 284, 453, 658, 1154, 1371, 1469, 1487
FriOI GRGCYC 2 cut(s) 812, 2035
FspBI CTAG 9 cut(s) 69, 254, 495, 680, 744, 1085, 1182, 1641, 2402
GlaI GCGC 4 cut(s) 219, 357, 1363, 1625
HaeII RGCGCY 1 cut(s) 359
HaeIII GGCC 2 cut(s) 828, 1339
HapII CCGG 6 cut(s) 29, 186, 242, 269, 329, 1336
HgaI GACGC 3 cut(s) 823, 2376, 2400
HhaI GCGC 4 cut(s) 220, 358, 1364, 1626
Hin1I GRCGYC 2 cut(s) 356, 2411
Hin6I GCGC 4 cut(s) 218, 356, 1362, 1624
HinP1I GCGC 4 cut(s) 218, 356, 1362, 1624
HpaII CCGG 6 cut(s) 29, 186, 242, 269, 329, 1336
HphI GGTGA 6 cut(s) 203, 231, 410, 434, 1767, 2076
Hpy166II GTNNAC 6 cut(s) 178, 583, 701, 1495, 1658, 1982
Hpy188I TCNGA 8 cut(s) 133, 910, 1271, 1857, 1885, 1969, 2125, 2393
Hpy8I GTNNAC 6 cut(s) 178, 583, 701, 1495, 1658, 1982
Hpy99I CGWCG 4 cut(s) 155, 817, 2250, 2416
HpyAV CCTTC 8 cut(s) 119, 369, 401, 839, 1070, 1447, 1666, 1836
HpyCH4III ACNGT 4 cut(s) 967, 1422, 1633, 1822
HpyCH4IV ACGT 5 cut(s) 345, 784, 1196, 1654, 2248
HpyCH4V TGCA 9 cut(s) 440, 481, 491, 707, 1315, 1460, 1480, 1669, 2233
HpyF10VI GCNNNNNNNGC 4 cut(s) 242, 320, 329, 1405
HpySE526I ACGT 5 cut(s) 345, 784, 1196, 1654, 2248
Hsp92I GRCGYC 2 cut(s) 356, 2411
HspAI GCGC 4 cut(s) 218, 356, 1362, 1624
KasI GGCGCC 1 cut(s) 355
Kpn2I TCCGGA 1 cut(s) 268
Ksp22I TGATCA 1 cut(s) 451
LguI GCTCTTC 1 cut(s) 330
LmnI GCTCC 6 cut(s) 4, 515, 563, 761, 1858, 2030
Lsp1109I GCAGC 4 cut(s) 1386, 1837, 1889, 2094
LweI GCATC 5 cut(s) 651, 1297, 1302, 1349, 1447
MaeI CTAG 9 cut(s) 69, 254, 495, 680, 744, 1085, 1182, 1641, 2402
MaeII ACGT 5 cut(s) 345, 784, 1196, 1654, 2248
MfeI CAATTG 1 cut(s) 2165
MflI RGATCY 4 cut(s) 128, 1685, 1796, 1928
MhlI GDGCHC 3 cut(s) 812, 857, 2035
Mly113I GGCGCC 1 cut(s) 356
MlyI GAGTC 2 cut(s) 1638, 2170
MmeI TCCRAC 2 cut(s) 1868, 1895
MroI TCCGGA 1 cut(s) 268
MroXI GAANNNNTTC 3 cut(s) 226, 904, 1002
MslI CAYNNNNRTG 2 cut(s) 486, 1473
MspI CCGG 6 cut(s) 29, 186, 242, 269, 329, 1336
MspR9I CCNGG 1 cut(s) 2112
MunI CAATTG 1 cut(s) 2165
Mva1269I GAATGC 3 cut(s) 481, 1086, 1543
MvaI CCWGG 1 cut(s) 2112
MvnI CGCG 3 cut(s) 220, 2152, 2370
MwoI GCNNNNNNNGC 4 cut(s) 242, 320, 329, 1405
NarI GGCGCC 1 cut(s) 356
NdeI CATATG 1 cut(s) 1665
NlaIV GGNNCC 4 cut(s) 6, 130, 357, 2032
NmuCI GTSAC 4 cut(s) 497, 1435, 1694, 1773
NspI RCATGY 1 cut(s) 1415
PaeR7I CTCGAG 2 cut(s) 1646, 2448
PagI TCATGA 1 cut(s) 1603
PaqCI CACCTGC 1 cut(s) 431
PciI ACATGT 1 cut(s) 1411
PciSI GCTCTTC 1 cut(s) 330
PcsI WCGNNNNNNNCGW 1 cut(s) 129
PctI GAATGC 3 cut(s) 481, 1086, 1543
PdmI GAANNNNTTC 3 cut(s) 226, 904, 1002
PinAI ACCGGT 1 cut(s) 185
PleI GAGTC 2 cut(s) 1638, 2169
PluTI GGCGCC 1 cut(s) 359
PpsI GAGTC 2 cut(s) 1638, 2169
PpuMI RGGWCCY 1 cut(s) 2239
PscI ACATGT 1 cut(s) 1411
PsiI TTATAA 1 cut(s) 1383
Psp124BI GAGCTC 1 cut(s) 812
Psp1406I AACGTT 1 cut(s) 345
Psp5II RGGWCCY 1 cut(s) 2239
Psp6I CCWGG 1 cut(s) 2110
PspGI CCWGG 1 cut(s) 2110
PspN4I GGNNCC 4 cut(s) 6, 130, 357, 2032
PspPI GGNCC 3 cut(s) 1818, 2147, 2239
PspPPI RGGWCCY 1 cut(s) 2239
PspXI VCTCGAGB 2 cut(s) 1646, 2448
PstI CTGCAG 1 cut(s) 442
PsuI RGATCY 4 cut(s) 128, 1685, 1796, 1928
RsaI GTAC 6 cut(s) 465, 748, 879, 1199, 1370, 2155
RsaNI GTAC 6 cut(s) 464, 747, 878, 1198, 1369, 2154
RseI CAYNNNNRTG 2 cut(s) 486, 1473
SacI GAGCTC 1 cut(s) 812
SapI GCTCTTC 1 cut(s) 330
Sau96I GGNCC 3 cut(s) 1818, 2147, 2239
ScaI AGTACT 1 cut(s) 1370
SchI GAGTC 2 cut(s) 1638, 2170
ScrFI CCNGG 1 cut(s) 2112
SduI GDGCHC 3 cut(s) 812, 857, 2035
SfaNI GCATC 5 cut(s) 651, 1297, 1302, 1349, 1447
SfcI CTRYAG 2 cut(s) 231, 438
SfoI GGCGCC 1 cut(s) 357
Sfr274I CTCGAG 2 cut(s) 1646, 2448
SgrAI CRCCGGYG 1 cut(s) 241
SinI GGWCC 3 cut(s) 1818, 2147, 2239
SlaI CTCGAG 2 cut(s) 1646, 2448
SmiMI CAYNNNNRTG 2 cut(s) 486, 1473
SmlI CTYRAG 3 cut(s) 1646, 2025, 2448
SmoI CTYRAG 3 cut(s) 1646, 2025, 2448
SpeI ACTAGT 2 cut(s) 494, 743
SspDI GGCGCC 1 cut(s) 355
SspI AATATT 1 cut(s) 1153
SspMI CTAG 9 cut(s) 69, 254, 495, 680, 744, 1085, 1182, 1641, 2402
SstI GAGCTC 1 cut(s) 812
StyD4I CCNGG 1 cut(s) 2110
StyI CCWWGG 1 cut(s) 790
TaaI ACNGT 4 cut(s) 967, 1422, 1633, 1822
TaiI ACGT 5 cut(s) 348, 787, 1199, 1657, 2251
TaqII GACCGA 2 cut(s) 195, 1334
TatI WGTACW 3 cut(s) 463, 746, 1368
TauI GCSGC 6 cut(s) 68, 91, 356, 667, 1352, 1544
TscAI CASTG 2 cut(s) 1108, 1762
TseFI GTSAC 4 cut(s) 497, 1435, 1694, 1773
TseI GCWGC 4 cut(s) 1399, 1850, 1877, 2107
Tsp45I GTSAC 4 cut(s) 497, 1435, 1694, 1773
TspDTI ATGAA 5 cut(s) 420, 662, 909, 1040, 1652
TspGWI ACGGA 3 cut(s) 88, 651, 1247
TspRI CASTG 2 cut(s) 1108, 1762
VpaK11BI GGWCC 3 cut(s) 1818, 2147, 2239
XagI CCTNNNNNAGG 1 cut(s) 1807
XapI RAATTY 3 cut(s) 1392, 1781, 1889
XbaI TCTAGA 2 cut(s) 1181, 1640
XceI RCATGY 1 cut(s) 1415
XhoI CTCGAG 2 cut(s) 1646, 2448
XmiI GTMKAC 3 cut(s) 177, 582, 1657
XmnI GAANNNNTTC 3 cut(s) 226, 904, 1002
XspI CTAG 9 cut(s) 69, 254, 495, 680, 744, 1085, 1182, 1641, 2402
ZrmI AGTACT 1 cut(s) 1370
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.