Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0002310

Physical Location & Seq

Genomic Coordinates Reverse (-)

33272354 .. 33274786

Gene Structure 2433 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g42820.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2433 bp

ATGCCTAGCTTTGCAACAAAGCCAGCCTCAGCTATGGGGAAAAGTAACAACCATGGTCGCCAAAGCTGCACCAAGCAGTTTTGGAGGGCTGGGGAATACGAAGGAGTTGCTCGCAACACCCGTAGAAACATTGATTTGTCTTCCACTAATGGATTCGATCACGCGAGGATGCACCCCAAGTTTCTGCACTCCAACGCTACGAGTCACAAGTGGGCTCTCGGAGCTTTCGCAGAGCTCTTAGACAATGCACTGGACGAAGTGCACAATGGTGCTACCTATGTCAATGTAGACGTGCTTGACAACAAGAAAGACGGAAGCAAAATGCTCCTGGTTGAAGACAATGGTGGCGGGATGGACCCAGAGAAGATGAGGAAGTGCATGTCTTTGGGGTACTCGGAGAAAAGCAAGAAGAAAGACACCATTGGACAGTATGGAAATGGTTTCAAAACAAGTACCATGAGGCTTGGGGCTGACGTCATCGTCTTCTCTCGTACAAGTGGAACCCAGAGCATAGGGTTGTTGTCTTACACTTTCTTGAGGAGCACGGGAAAGGAGGATATTGTAGTCCCCATACTGGACTATGAGAGAAGACGAGGGATTGCCACAGAGATGTTACGATCCTCAAGCGAAAACTGGAACAAAAATTTGGAGACGATACTCGAGTGGTCGCCATTTGAGAGTGAGGAAGAGTTGAAAAACCAATTTCGGATGATGAAGCAACAAGGCACTCGAATAATCATATACAACCTTTGGGAGGACGACGAAGGAAACTTGGAGCTTGACTTAGATAGTGAAGCTCATGATATTCAAATGAGGGGAGTGAACCGGGATGCGAAGAACATACAAATGGCTGAACAGTATCCAAACTCTCGTCATTTTTTGACCTACCGTCACTCTTTAAGGAGTTATGCAGCAATTATCTACTTGCGGCTTCCCCCCAACTTCAGAATCATTCTTCGTGGCAAGGATGTTGAGCATCACAACATTTTGAATGATTTGATGTGGCCCCAGCACATCACGTATAGGCCTAAGCCCCTTGAAAAGGAGGAGACATATATAACGAAGAAAACCAAGAAGGGAAAGAAGGATACAAATATGGTTGCTGAGGTCACTCTTGGGTTTGTGAAAGATGCAGAAAACCATCTGGATGTTCAAGGGTTCAACGTATATCACAGGAATAGGCTGATCATGCCGTTTTGGAGGGTATGGAATGCTGCGGGAAGCGATGGCCGCGGTGTTATAGGTGTTATAGAAGCTGATTATATCAACCCGGCTCATGATAAGCAGGGATTTGAGCATACCGTACTTCTTGATAGACTGAAGCAGAAGTTAGCAGAAGGGCAAAAGGATTACTGGTGTACCAATTGTCACAAAATTGGCTATGCTCCACGCCGCAATAAGAAGGCTATTAATGAAGAAAGGGAAGCTGCTAATAAGTCAGGTAACCAGGGTCAACCAGTTTTAGATTCAAATCCAGACACGTCCTCTTCACGCATGAGAGCCGTTTTAGATTCAAATCTAGACGAATCCTCTTCACGCAAGAGACCGGTTTTAGATTCAAATCTAGAGAAGTCCTCTTCTCGCAAGAGATCACTCCCAGATCCGAATACAAATGTAGCCCCACACAAAAGTCAAAAAGTTTCTTCAGACAAATCTCCTAATGGGAATGGGAATGGGAATATTCAGAAGAAAATCACACTGCAGACAGCCACAAAATCATCAACCCGTCGCCCAGAAATTGTGTCAGGATTAAGTTCTTCTAGACCACATGCTAACAAGCATAAAGCATCATCACCAACACCCAATGCCTTGTCTGGTATTGCTCACATGAAGGCTGCTACTTCCGATAAGCAAGCGAAAGGAAGAAATACCGATAAGGCAAAGAAAAACTCTGAGAAGAACGTGGATGAAGTGGTACATCATTCACACATGGAAGAGGATTCTCTATCTGAACAAGAGCCTACACCATGTGGAACCAATAGTCCAACCACCACAATATCCAAGTCCAAGGGAAATGATGTCAATGTCAGGTGTTCACCTTCAAAGGGTGATTTAAGAGCGGTGGAGCAACCAAGAAAGGAGAAGCAAGGGAATGTAGCTGCTGATGTGCAGACTGAAAGATGCAAGTCACGAAGAGACAATGAGGAACTGAATCAAGAGGAAAACAACTTAAAAAAACAGTTGTTGAATGCATCTAATACTATTCGAGAACTGCATACACAACTCCAGAAGGCAAATGAAGAAATTAAGAAACTGAACATGCAACAAGACGAGAGAGCACGACGAGACAAAGAAGAAAACAGCTTATTGAAGAACCAACTAGAAAAGGCAAATGAAGAGATTTCTGAACTGAACAAAATACAAAAAGCTCTGATTGAGCTGTTGCAGGAGGAGCGAGATAAAGTTGAGGCACTCAACCCGAAAGGTTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006282 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016020 GO:0016462 GO:0016604 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0031935 GO:0031974 GO:0031981 GO:0032101 GO:0032103 GO:0033043 GO:0033044 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043621 GO:0043900 GO:0043902 GO:0044030 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051052 GO:0051128 GO:0051171 GO:0051252 GO:0060255 GO:0060968 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1902275 GO:1902288 GO:1902290 GO:1903506 GO:2000112 GO:2001020 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c_3

Protein Analysis

811

Amino Acids

91.66

Weight (kDa)

9.15

Isoelectric Point (pI)

51.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c_3	PF13589	74 - 188	8.2e-21	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c	PF02518	75 - 154	2e-07	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Morc6_S5	PF17942	298 - 452	4.4e-54	Morc6 ribosomal protein S5 domain 2-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24970 AT5G50780 AT5G50780 AT5G50780
fragaria_vesca	FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_6g42820
malus_domestica	MD06G1137200.v1.1 MD09G1078200.v1.1 MD14G1151900.v1.1 MD17G1068200.v1.1 MD17G1068600.v1.1
prunus_persica	Prupe.5G147000_v2.0.a1 Prupe.5G147000_v2.0.a1 Prupe.5G147000_v2.0.a1
pyrus_communis	pycom06g12840 pycom14g12650 pycom17g06890
rosa_chinensis	RchiOBHm_Chr2g0158661 RchiOBHm_Chr7g0189451
rosa_laevigata	RLG00000004610 RLG00000021104
rosa_multiflora	Rmu_sc0004188.1_g000012
rosa_roxburghii	Rroxscaffold_2G00091130 Rroxscaffold_3G00265430
rosa_rugosa	Rorug02G0471200 Rorug06G0498000 Rorug06G0498100
rosa_samantha	Rh2AG537000 Rh2BG550200 Rh2CG520700 Rh2DG559800 Rh7AG102800 Rh7BG105500 Rh7CG107300 Rh7DG104900
rosa_wichuraiana	Rw2G044460 Rw7G008890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	479
AatII	GACGTC	1 cut(s)	477
AccBSI	CCGCTC	1 cut(s)	2060
AccI	GTMKAC	1 cut(s)	288
AccII	CGCG	2 cut(s)	164, 1233
AciI	CCGC	7 cut(s)	348, 928, 1217, 1231, 1233, 1393, 2060
AclWI	GGATC	2 cut(s)	612, 1595
AcoI	YGGCCR	1 cut(s)	1228
AcsI	RAATTY	1 cut(s)	643
AcuI	CTGAAG	3 cut(s)	928, 1340, 1629
AcyI	GRCGYC	1 cut(s)	474
AdeI	CACNNNGTG	1 cut(s)	1970
AfaI	GTAC	6 cut(s)	392, 454, 493, 1305, 1360, 1917
AfiI	CCNNNNNNNGG	4 cut(s)	574, 754, 1042, 2045
AflIII	ACRYGT	1 cut(s)	1479
AgeI	ACCGGT	1 cut(s)	1546
AhdI	GACNNNNNGTC	1 cut(s)	888
AjiI	CACGTC	2 cut(s)	292, 1482
AjnI	CCWGG	2 cut(s)	327, 1446
AjuI	GAANNNNNNNTTGG	2 cut(s)	629, 661
AleI	CACNNNNGTG	1 cut(s)	267
AloI	GAACNNNNNNTCC	2 cut(s)	1966, 1998
Alw21I	GWGCWC	4 cut(s)	237, 264, 545, 2281
Alw26I	GTCTC	5 cut(s)	644, 1043, 1537, 2130, 2280
Alw44I	GTGCAC	1 cut(s)	260
AlwI	GGATC	2 cut(s)	612, 1595
Ama87I	CYCGRG	1 cut(s)	659
AoxI	GGCC	3 cut(s)	1004, 1025, 1228
ApaLI	GTGCAC	1 cut(s)	260
ApeKI	GCWGC	6 cut(s)	66, 911, 1214, 1427, 1835, 2099
ApoI	RAATTY	1 cut(s)	643
AseI	ATTAAT	1 cut(s)	1410
AsiGI	ACCGGT	1 cut(s)	1546
AspS9I	GGNCC	2 cut(s)	355, 1005
AsuC2I	CCSGG	2 cut(s)	827, 1271
AsuHPI	GGTGA	3 cut(s)	1785, 2028, 2060
AvaI	CYCGRG	1 cut(s)	659
AvaII	GGWCC	1 cut(s)	355
BaeGI	GKGCMC	1 cut(s)	264
BaeI	ACNNNNGTAYC	4 cut(s)	647, 680, 1342, 1375
BanII	GRGCYC	2 cut(s)	217, 237
BbsI	GAAGAC	4 cut(s)	132, 342, 475, 595
Bbv12I	GWGCWC	4 cut(s)	237, 264, 545, 2281
BbvCI	CCTCAGC	2 cut(s)	28, 1104
BbvI	GCAGC	6 cut(s)	53, 923, 1201, 1414, 1822, 2086
BccI	CCATC	3 cut(s)	346, 1149, 1220
BceAI	ACGGC	2 cut(s)	1177, 1487
BcgI	CGANNNNNNTGC	2 cut(s)	89, 123
BciT130I	CCWGG	2 cut(s)	329, 1448
BciVI	GTATCC	2 cut(s)	870, 1081
BclI	TGATCA	1 cut(s)	1185
BcnI	CCSGG	2 cut(s)	827, 1271
BcoDI	GTCTC	5 cut(s)	644, 1043, 1537, 2130, 2280
BfaI	CTAG	5 cut(s)	6, 1520, 1565, 1761, 2321
BfmI	CTRYAG	1 cut(s)	1700
BfuI	GTATCC	2 cut(s)	870, 1081
BisI	GCNGC	9 cut(s)	67, 912, 929, 1215, 1231, 1393, 1428, 1836, 2100
BlsI	GCNGC	9 cut(s)	68, 913, 930, 1216, 1232, 1394, 1429, 1837, 2101
Bme1390I	CCNGG	4 cut(s)	329, 827, 1271, 1448
Bme18I	GGWCC	1 cut(s)	355
BmeRI	GACNNNNNGTC	1 cut(s)	888
BmeT110I	CYCGRG	1 cut(s)	659
BmgBI	CACGTC	2 cut(s)	292, 1482
BmgT120I	GGNCC	2 cut(s)	355, 1005
BmiI	GGNNCC	4 cut(s)	357, 502, 1007, 1975
BmrFI	CCNGG	4 cut(s)	329, 827, 1271, 1448
BmsI	GCATC	7 cut(s)	159, 820, 985, 1120, 1796, 2111, 2201
BpiI	GAAGAC	4 cut(s)	132, 342, 475, 595
BplI	GAGNNNNNCTC	2 cut(s)	1559, 1591
BpmI	CTGGAG	1 cut(s)	2210
Bpu10I	CCTNAGC	3 cut(s)	28, 1029, 1104
BpuEI	CTTGAG	2 cut(s)	556, 607
BpuMI	CCSGG	2 cut(s)	827, 1271
BsaAI	YACGTR	1 cut(s)	1020
BsaBI	GATNNNNATC	3 cut(s)	1470, 1515, 1560
BsaHI	GRCGYC	1 cut(s)	474
BsaI	GGTCTC	1 cut(s)	1537
BsaJI	CCNNGG	4 cut(s)	52, 1231, 1447, 2007
BsaWI	WCCGGW	1 cut(s)	1546
Bsc4I	CCNNNNNNNGG	4 cut(s)	574, 754, 1042, 2045
Bse118I	RCCGGY	1 cut(s)	1546
Bse1I	ACTGG	5 cut(s)	255, 579, 638, 1358, 1457
Bse8I	GATNNNNATC	3 cut(s)	1470, 1515, 1560
BseBI	CCWGG	2 cut(s)	329, 1448
BseDI	CCNNGG	4 cut(s)	52, 1231, 1447, 2007
BseGI	GGATG	7 cut(s)	174, 357, 714, 835, 973, 1153, 1912
BseJI	GATNNNNATC	3 cut(s)	1470, 1515, 1560
BseLI	CCNNNNNNNGG	4 cut(s)	574, 754, 1042, 2045
BseMII	CTCAG	3 cut(s)	42, 1095, 1884
BseNI	ACTGG	5 cut(s)	255, 579, 638, 1358, 1457
BseRI	GAGGAG	3 cut(s)	553, 1061, 2405
BseSI	GKGCMC	1 cut(s)	264
BseXI	GCAGC	6 cut(s)	53, 923, 1201, 1414, 1822, 2086
BseYI	CCCAGC	2 cut(s)	89, 1008
BsgI	GTGCAG	3 cut(s)	52, 170, 2129
Bsh1236I	CGCG	2 cut(s)	164, 1233
BshFI	GGCC	3 cut(s)	1006, 1027, 1230
BshTI	ACCGGT	1 cut(s)	1546
BsiHKAI	GWGCWC	4 cut(s)	237, 264, 545, 2281
BsiHKCI	CYCGRG	1 cut(s)	659
BsiSI	CCGG	3 cut(s)	826, 1271, 1547
BslFI	GGGAC	1 cut(s)	551
BslI	CCNNNNNNNGG	4 cut(s)	574, 754, 1042, 2045
BsmAI	GTCTC	5 cut(s)	644, 1043, 1537, 2130, 2280
BsmBI	CGTCTC	1 cut(s)	644
BsmFI	GGGAC	1 cut(s)	551
BsmI	GAATGC	2 cut(s)	1216, 2194
BsnI	GGCC	3 cut(s)	1006, 1027, 1230
Bso31I	GGTCTC	1 cut(s)	1537
BsoBI	CYCGRG	1 cut(s)	659
Bsp1286I	GDGCHC	5 cut(s)	217, 237, 264, 545, 2281
Bsp143I	GATC	5 cut(s)	157, 617, 1185, 1589, 1600
Bsp19I	CCATGG	1 cut(s)	52
BspACI	CCGC	7 cut(s)	348, 928, 1217, 1231, 1233, 1393, 2060
BspANI	GGCC	3 cut(s)	1006, 1027, 1230
BspCNI	CTCAG	3 cut(s)	41, 1096, 1885
BspFNI	CGCG	2 cut(s)	164, 1233
BspHI	TCATGA	2 cut(s)	799, 1276
BspLI	GGNNCC	4 cut(s)	357, 502, 1007, 1975
BspMAI	CTGCAG	1 cut(s)	1704
BspPI	GGATC	2 cut(s)	612, 1595
BspTNI	GGTCTC	1 cut(s)	1537
BsrBI	CCGCTC	1 cut(s)	2060
BsrFI	RCCGGY	1 cut(s)	1546
BsrI	ACTGG	5 cut(s)	255, 579, 638, 1358, 1457
BssAI	RCCGGY	1 cut(s)	1546
BssECI	CCNNGG	4 cut(s)	52, 1231, 1447, 2007
BssMI	GATC	5 cut(s)	157, 617, 1185, 1589, 1600
BssNI	GRCGYC	1 cut(s)	474
BssT1I	CCWWGG	2 cut(s)	52, 2007
Bst2UI	CCWGG	2 cut(s)	329, 1448
Bst4CI	ACNGT	5 cut(s)	429, 858, 890, 1303, 2181
Bst6I	CTCTTC	7 cut(s)	681, 1492, 1537, 1582, 1929, 2128, 2331
BstACI	GRCGYC	1 cut(s)	474
BstBAI	YACGTR	1 cut(s)	1020
BstC8I	GCNNGC	3 cut(s)	24, 112, 1854
BstDEI	CTNAG	6 cut(s)	28, 238, 784, 1029, 1104, 1893
BstDSI	CCRYGG	2 cut(s)	52, 1231
BstEII	GGTNACC	1 cut(s)	1442
BstENI	CCTNNNNNAGG	2 cut(s)	752, 1040
BstF5I	GGATG	7 cut(s)	174, 357, 714, 835, 973, 1153, 1912
BstFNI	CGCG	2 cut(s)	164, 1233
BstKTI	GATC	5 cut(s)	160, 620, 1188, 1592, 1603
BstMAI	GTCTC	5 cut(s)	644, 1043, 1537, 2130, 2280
BstMBI	GATC	5 cut(s)	157, 617, 1185, 1589, 1600
BstMWI	GCNNNNNNNGC	5 cut(s)	66, 221, 1189, 1230, 2392
BstNI	CCWGG	2 cut(s)	329, 1448
BstNSI	RCATGY	3 cut(s)	382, 1772, 2263
BstPI	GGTNACC	1 cut(s)	1442
BstSCI	CCNGG	4 cut(s)	327, 825, 1269, 1446
BstSFI	CTRYAG	1 cut(s)	1700
BstSLI	GKGCMC	1 cut(s)	264
BstUI	CGCG	2 cut(s)	164, 1233
BstV1I	GCAGC	6 cut(s)	53, 923, 1201, 1414, 1822, 2086
BstV2I	GAAGAC	4 cut(s)	132, 342, 475, 595
BstX2I	RGATCY	1 cut(s)	1600
BstYI	RGATCY	1 cut(s)	1600
BsuI	GTATCC	2 cut(s)	870, 1081
BsuRI	GGCC	3 cut(s)	1006, 1027, 1230
BtgI	CCRYGG	2 cut(s)	52, 1231
BtgZI	GCGATG	1 cut(s)	1239
BtrI	CACGTC	2 cut(s)	292, 1482
BtsCI	GGATG	7 cut(s)	174, 357, 714, 835, 973, 1153, 1912
BtsI	GCAGTG	1 cut(s)	1697
BtsIMutI	CAGTG	2 cut(s)	248, 1697
Cac8I	GCNNGC	3 cut(s)	24, 112, 1854
CciI	TCATGA	2 cut(s)	799, 1276
Cfr10I	RCCGGY	1 cut(s)	1546
Cfr13I	GGNCC	2 cut(s)	355, 1005
Cfr42I	CCGCGG	1 cut(s)	1234
Csp6I	GTAC	6 cut(s)	391, 453, 492, 1304, 1359, 1916
CspAI	ACCGGT	1 cut(s)	1546
CviQI	GTAC	6 cut(s)	391, 453, 492, 1304, 1359, 1916
DdeI	CTNAG	6 cut(s)	28, 238, 784, 1029, 1104, 1893
DpnI	GATC	5 cut(s)	159, 619, 1187, 1591, 1602
DpnII	GATC	5 cut(s)	157, 617, 1185, 1589, 1600
DraIII	CACNNNGTG	1 cut(s)	1970
DrdI	GACNNNNNNGTC	1 cut(s)	479
DriI	GACNNNNNGTC	1 cut(s)	888
DseDI	GACNNNNNNGTC	1 cut(s)	479
EaeI	YGGCCR	1 cut(s)	1228
Eam1104I	CTCTTC	7 cut(s)	681, 1492, 1537, 1582, 1929, 2128, 2331
Eam1105I	GACNNNNNGTC	1 cut(s)	888
EarI	CTCTTC	7 cut(s)	681, 1492, 1537, 1582, 1929, 2128, 2331
Ecl136II	GAGCTC	1 cut(s)	235
Eco130I	CCWWGG	2 cut(s)	52, 2007
Eco147I	AGGCCT	1 cut(s)	1027
Eco24I	GRGCYC	2 cut(s)	217, 237
Eco31I	GGTCTC	1 cut(s)	1537
Eco47I	GGWCC	1 cut(s)	355
Eco53kI	GAGCTC	1 cut(s)	235
Eco57I	CTGAAG	3 cut(s)	928, 1340, 1629
Eco88I	CYCGRG	1 cut(s)	659
Eco91I	GGTNACC	1 cut(s)	1442
EcoICRI	GAGCTC	1 cut(s)	235
EcoNI	CCTNNNNNAGG	2 cut(s)	752, 1040
EcoO65I	GGTNACC	1 cut(s)	1442
EcoRII	CCWGG	2 cut(s)	327, 1446
EcoT14I	CCWWGG	2 cut(s)	52, 2007
EcoT22I	ATGCAT	1 cut(s)	2194
EcoT38I	GRGCYC	2 cut(s)	217, 237
ErhI	CCWWGG	2 cut(s)	52, 2007
Esp3I	CGTCTC	1 cut(s)	644
FaqI	GGGAC	1 cut(s)	551
FauI	CCCGC	2 cut(s)	341, 1210
FbaI	TGATCA	1 cut(s)	1185
FblI	GTMKAC	1 cut(s)	288
Fnu4HI	GCNGC	9 cut(s)	67, 912, 929, 1215, 1231, 1393, 1428, 1836, 2100
FokI	GGATG	7 cut(s)	181, 364, 721, 842, 980, 1160, 1919
FriOI	GRGCYC	2 cut(s)	217, 237
Fsp4HI	GCNGC	9 cut(s)	67, 912, 929, 1215, 1231, 1393, 1428, 1836, 2100
FspBI	CTAG	5 cut(s)	6, 1520, 1565, 1761, 2321
GluI	GCNGC	9 cut(s)	67, 912, 929, 1215, 1231, 1393, 1428, 1836, 2100
GsaI	CCCAGC	2 cut(s)	93, 1012
GsuI	CTGGAG	1 cut(s)	2210
HaeIII	GGCC	3 cut(s)	1006, 1027, 1230
HapII	CCGG	3 cut(s)	826, 1271, 1547
Hin1I	GRCGYC	1 cut(s)	474
HincII	GTYRAC	1 cut(s)	1454
HindII	GTYRAC	1 cut(s)	1454
HinfI	GANTC	9 cut(s)	153, 202, 948, 1466, 1511, 1526, 1556, 1940, 2152
HpaII	CCGG	3 cut(s)	826, 1271, 1547
HphI	GGTGA	3 cut(s)	1785, 2028, 2060
Hpy166II	GTNNAC	6 cut(s)	262, 289, 823, 1359, 1454, 2036
Hpy8I	GTNNAC	6 cut(s)	262, 289, 823, 1359, 1454, 2036
Hpy99I	CGWCG	3 cut(s)	764, 1731, 2286
HpyAV	CCTTC	9 cut(s)	95, 758, 1069, 1078, 1331, 1396, 1825, 2049, 2224
HpyCH4III	ACNGT	5 cut(s)	429, 858, 890, 1303, 2181
HpyCH4IV	ACGT	6 cut(s)	291, 474, 1019, 1164, 1481, 1902
HpyF10VI	GCNNNNNNNGC	5 cut(s)	66, 221, 1189, 1230, 2392
HpyF3I	CTNAG	6 cut(s)	28, 238, 784, 1029, 1104, 1893
HpySE526I	ACGT	6 cut(s)	291, 474, 1019, 1164, 1481, 1902
Hsp92I	GRCGYC	1 cut(s)	474
Ksp22I	TGATCA	1 cut(s)	1185
KspI	CCGCGG	1 cut(s)	1234
Kzo9I	GATC	5 cut(s)	157, 617, 1185, 1589, 1600
LmnI	GCTCC	7 cut(s)	221, 330, 540, 775, 1390, 2065, 2392
Lsp1109I	GCAGC	6 cut(s)	53, 923, 1201, 1414, 1822, 2086
LweI	GCATC	7 cut(s)	159, 820, 985, 1120, 1796, 2111, 2201
MaeI	CTAG	5 cut(s)	6, 1520, 1565, 1761, 2321
MaeII	ACGT	6 cut(s)	291, 474, 1019, 1164, 1481, 1902
MaeIII	GTNAC	8 cut(s)	44, 203, 612, 890, 1108, 1367, 1442, 2127
MalI	GATC	5 cut(s)	159, 619, 1187, 1591, 1602
MbiI	CCGCTC	1 cut(s)	2060
MboI	GATC	5 cut(s)	157, 617, 1185, 1589, 1600
MfeI	CAATTG	1 cut(s)	1363
MflI	RGATCY	1 cut(s)	1600
MhlI	GDGCHC	5 cut(s)	217, 237, 264, 545, 2281
MluCI	AATT	7 cut(s)	643, 701, 915, 1363, 1374, 1737, 2244
MlyI	GAGTC	1 cut(s)	211
MmeI	TCCRAC	2 cut(s)	216, 2009
Mph1103I	ATGCAT	1 cut(s)	2194
MseI	TTAA	7 cut(s)	899, 1410, 1751, 2054, 2171, 2247, 2431
MslI	CAYNNNNRTG	4 cut(s)	267, 608, 845, 1146
MspA1I	CMGCKG	1 cut(s)	1233
MspI	CCGG	3 cut(s)	826, 1271, 1547
MspR9I	CCNGG	4 cut(s)	329, 827, 1271, 1448
MunI	CAATTG	1 cut(s)	1363
Mva1269I	GAATGC	2 cut(s)	1216, 2194
MvaI	CCWGG	2 cut(s)	329, 1448
MvnI	CGCG	2 cut(s)	164, 1233
MwoI	GCNNNNNNNGC	5 cut(s)	66, 221, 1189, 1230, 2392
NciI	CCSGG	2 cut(s)	827, 1271
NcoI	CCATGG	1 cut(s)	52
NdeII	GATC	5 cut(s)	157, 617, 1185, 1589, 1600
NlaIV	GGNNCC	4 cut(s)	357, 502, 1007, 1975
NmuCI	GTSAC	5 cut(s)	203, 890, 1108, 1367, 2127
NsiI	ATGCAT	1 cut(s)	2194
NspI	RCATGY	3 cut(s)	382, 1772, 2263
OliI	CACNNNNGTG	1 cut(s)	267
PaeR7I	CTCGAG	1 cut(s)	659
PagI	TCATGA	2 cut(s)	799, 1276
PceI	AGGCCT	1 cut(s)	1027
PcsI	WCGNNNNNNNCGW	1 cut(s)	118
PctI	GAATGC	2 cut(s)	1216, 2194
PfeI	GAWTC	8 cut(s)	153, 948, 1466, 1511, 1526, 1556, 1940, 2152
PinAI	ACCGGT	1 cut(s)	1546
PkrI	GCNGC	9 cut(s)	68, 913, 930, 1216, 1232, 1394, 1429, 1837, 2101
PleI	GAGTC	1 cut(s)	210
PpsI	GAGTC	1 cut(s)	210
Ppu21I	YACGTR	1 cut(s)	1020
PshBI	ATTAAT	1 cut(s)	1410
Psp124BI	GAGCTC	1 cut(s)	237
Psp6I	CCWGG	2 cut(s)	327, 1446
PspEI	GGTNACC	1 cut(s)	1442
PspFI	CCCAGC	2 cut(s)	89, 1008
PspGI	CCWGG	2 cut(s)	327, 1446
PspN4I	GGNNCC	4 cut(s)	357, 502, 1007, 1975
PspPI	GGNCC	2 cut(s)	355, 1005
PspXI	VCTCGAGB	1 cut(s)	659
PstI	CTGCAG	1 cut(s)	1704
PsuI	RGATCY	1 cut(s)	1600
RsaI	GTAC	6 cut(s)	392, 454, 493, 1305, 1360, 1917
RsaNI	GTAC	6 cut(s)	391, 453, 492, 1304, 1359, 1916
RseI	CAYNNNNRTG	4 cut(s)	267, 608, 845, 1146
SacI	GAGCTC	1 cut(s)	237
SacII	CCGCGG	1 cut(s)	1234
SaqAI	TTAA	7 cut(s)	899, 1410, 1751, 2054, 2171, 2247, 2431
SatI	GCNGC	9 cut(s)	67, 912, 929, 1215, 1231, 1393, 1428, 1836, 2100
Sau3AI	GATC	5 cut(s)	157, 617, 1185, 1589, 1600
Sau96I	GGNCC	2 cut(s)	355, 1005
SchI	GAGTC	1 cut(s)	211
ScrFI	CCNGG	4 cut(s)	329, 827, 1271, 1448
SduI	GDGCHC	5 cut(s)	217, 237, 264, 545, 2281
SfaNI	GCATC	7 cut(s)	159, 820, 985, 1120, 1796, 2111, 2201
SfcI	CTRYAG	1 cut(s)	1700
Sfr274I	CTCGAG	1 cut(s)	659
Sfr303I	CCGCGG	1 cut(s)	1234
SgrBI	CCGCGG	1 cut(s)	1234
SinI	GGWCC	1 cut(s)	355
SlaI	CTCGAG	1 cut(s)	659
SmiMI	CAYNNNNRTG	4 cut(s)	267, 608, 845, 1146
SmlI	CTYRAG	3 cut(s)	535, 622, 659
SmoI	CTYRAG	3 cut(s)	535, 622, 659
Sse9I	AATT	7 cut(s)	643, 701, 915, 1363, 1374, 1737, 2244
SseBI	AGGCCT	1 cut(s)	1027
SsiI	CCGC	7 cut(s)	348, 928, 1217, 1231, 1233, 1393, 2060
SspI	AATATT	1 cut(s)	1681
SspMI	CTAG	5 cut(s)	6, 1520, 1565, 1761, 2321
SstI	GAGCTC	1 cut(s)	237
StuI	AGGCCT	1 cut(s)	1027
StyD4I	CCNGG	4 cut(s)	327, 825, 1269, 1446
StyI	CCWWGG	2 cut(s)	52, 2007
TaaI	ACNGT	5 cut(s)	429, 858, 890, 1303, 2181
TaiI	ACGT	6 cut(s)	294, 477, 1022, 1167, 1484, 1905
TaqI	TCGA	4 cut(s)	156, 660, 730, 2206
TasI	AATT	7 cut(s)	643, 701, 915, 1363, 1374, 1737, 2244
TauI	GCSGC	3 cut(s)	931, 1233, 1395
TfiI	GAWTC	8 cut(s)	153, 948, 1466, 1511, 1526, 1556, 1940, 2152
Tru1I	TTAA	7 cut(s)	899, 1410, 1751, 2054, 2171, 2247, 2431
Tru9I	TTAA	7 cut(s)	899, 1410, 1751, 2054, 2171, 2247, 2431
TscAI	CASTG	2 cut(s)	255, 1704
TseFI	GTSAC	5 cut(s)	203, 890, 1108, 1367, 2127
TseI	GCWGC	6 cut(s)	66, 911, 1214, 1427, 1835, 2099
Tsp45I	GTSAC	5 cut(s)	203, 890, 1108, 1367, 2127
TspDTI	ATGAA	6 cut(s)	728, 1428, 1844, 1923, 2253, 2349
TspGWI	ACGGA	1 cut(s)	327
TspRI	CASTG	2 cut(s)	255, 1704
VneI	GTGCAC	1 cut(s)	260
VpaK11BI	GGWCC	1 cut(s)	355
VspI	ATTAAT	1 cut(s)	1410
XagI	CCTNNNNNAGG	2 cut(s)	752, 1040
XapI	RAATTY	1 cut(s)	643
XbaI	TCTAGA	3 cut(s)	1519, 1564, 1760
XceI	RCATGY	3 cut(s)	382, 1772, 2263
XhoI	CTCGAG	1 cut(s)	659
XmiI	GTMKAC	1 cut(s)	288
XspI	CTAG	5 cut(s)	6, 1520, 1565, 1761, 2321
ZraI	GACGTC	1 cut(s)	475
Zsp2I	ATGCAT	1 cut(s)	2194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.