Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0002310

Physical Location & Seq

Genomic Coordinates Reverse (-)

7903850 .. 7911011

Gene Structure 7162 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG105500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGCTTGAAAATCAGAAAGACGGAAGCAGAATTTTGCTGATTGAAGATAATGGTGGTGGGATGAATCCAGATAAGATACGAGACTGCATGTCATTGGGGTTTTCTACAAAGAGCAAAATCGCAAACACAATTGGACAATATGGAAATGGTTTTAAAACAAGTACCATGAGGCTTGGGGCAGACGTGATTGTGTTCTCTCGTTGTTGTGGAAAAGATGGAAAAAGTGCTACGCAGAGCATTGGATTGCTGTCTTACACATTTTTGAGGAGCACAGGAAAGGAAGATACTGTTGTTCCCATGCTTGATTATGAAAGACAAGGAGCAGATTGGTACAGGATGAGACGATCCTCTCCCAGCGATTGGAACAAAAATTTGGAAACGATACTTGAGTGGTCACCATTTTCTAGAGAAGAAGACTTGGATCACCAGTTCTATCAGATGAAAAACCAAGGCACTCGAGTAATTATTTACAATCTTTGGGAGGATGATGAAGGACAGTTGGAGCTTGATTTTGATGCTGATCCACATGATATTCAAATCAGAGGTGTCAATCGCGATGAAAAGAATATACAAATGGCTAAACAGTTTCCTAATTCTCGTCATTTTTTGACCTACCGGCACTCATTGAGGAGTTATGCAGCAATTCTATATTTGCGGCTACCCATCGACTTCCGAATTATTCTGCGTGGGAAGGATGTTGAGCACCACAACATAGTGAATGATATGATGATGTCCCAAAAAGTCACATATAAGCCACAGCCTAGTACTGCTGATGGGATACCCAAGGATGCAAATATGGCTGCTACTGTCACCATTGGGTTTGTGAAGGATGCAAAACATCATATTGATGTTCAGGGTTTCAATGTCTATCACAAGAATCGACTGATTAAGCCATTTTGGCGGCTTTGGAACGCTGCAGGAAGTGATGGCCGCGGTGTAATAGGTCTGTTAGAAGCCAATTTTGTTGAACCAGCTCATGACAAGCAAGGGTTTGAGCGTACAACAATTCTTTCAAGACTTGAGGCAAAATTAGTGCAAATGCAAAAGACATACTGGTCTACTAATTGTCATAAAATTGGATATGCTGCACGACGTAATAAGAAGGTCAACAATGCTGAAGATAAAGAGACTTCCCCTGATTTTCTTTCTGAAAGGGACGGTACCACATCAGGTGTCAAGAGACCACGTTCACTTTCAGATACATTCCGTTCAAAAACGGCTGACAATGGACATGGGAATATACATGTGTCCGGTAAAGGCAAAAGTACAGTGCAAATCCAAACAAAGTTGACCCCAACAAGATCCGGGGAAGAATCAAGCTCTTCTGAAGCATCACTACCTTTGCCAGCCAATGTTAGGGGTGGAAACGTGCATAAACAAGTGAATGGCGGTAGGGAATCACTACCTTCACCAGCCAATGTTAGGGGTGGAAATGTGCATAAACAAGTGAATGGCGGTAGGGAATCACTACCTTCGCCAGCCAATGTTAGGGGTGGAAACGTGCATAAACAAGTGAATGGCGGTAGGGAATCTAGGGACAAGGACATACATGTTGCTGTATGTGATAAGCAAGTGAATGGCAGTTTTCATAAGTCATTTACTGCTATGCATTATTCTGGAAAAGATGGTCCAGCTGTGACTGAATTATCTTCAGATATGGACGATACTGAATCCCAACAAGAGTGTACACCATGCAGAGGAACCAGTTTATCTGCCACAAAATCCAAGTCAAAGGGAAATTATTTTAATTTGGAGGATTTGAGCATTGTGCAGCGATTGAGAAAGGAGAATCATGAACTGAAAGAAAAATTGAAAAAGCAGGACGAACAGGCTCCAGCTGAATTGCTTAAGGACTTGATGCTGGAAAGGGAGAAGAACATAACACTTGAAACCAAGCTGAAAGAAGCGGAAAAACAGATTGAGTTCTTGAACAAGGAACAAGACAGTCTAATTGATATATTCACGGATGAGAGGCAGCGACGAGATGATGAAGAGAACAAGTTGAGAAAGAAGCTGCAGGTAGAATCCATTCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006282 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016020 GO:0016462 GO:0016604 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0031935 GO:0031974 GO:0031981 GO:0032101 GO:0032103 GO:0033043 GO:0033044 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043621 GO:0043900 GO:0043902 GO:0044030 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051052 GO:0051128 GO:0051171 GO:0051252 GO:0060255 GO:0060968 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1902275 GO:1902288 GO:1902290 GO:1903506 GO:2000112 GO:2001020 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c_3

Protein Analysis

678

Amino Acids

76.61

Weight (kDa)

8.81

Isoelectric Point (pI)

50.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c_3	PF13589	8 - 73	2.2e-11	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Morc6_S5	PF17942	207 - 352	5.1e-60	Morc6 ribosomal protein S5 domain 2-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24970 AT5G50780 AT5G50780 AT5G50780
fragaria_vesca	FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_6g42820
malus_domestica	MD06G1137200.v1.1 MD09G1078200.v1.1 MD14G1151900.v1.1 MD17G1068200.v1.1 MD17G1068600.v1.1
prunus_persica	Prupe.5G147000_v2.0.a1 Prupe.5G147000_v2.0.a1 Prupe.5G147000_v2.0.a1
pyrus_communis	pycom06g12840 pycom14g12650 pycom17g06890
rosa_chinensis	RchiOBHm_Chr2g0158661 RchiOBHm_Chr7g0189451
rosa_laevigata	RLG00000004610 RLG00000021104
rosa_multiflora	Rmu_sc0004188.1_g000012
rosa_roxburghii	Rroxscaffold_2G00091130 Rroxscaffold_3G00265430
rosa_rugosa	Rorug02G0471200 Rorug06G0498000 Rorug06G0498100
rosa_samantha	Rh2AG537000 Rh2BG550200 Rh2CG520700 Rh2DG559800 Rh7AG102800 Rh7BG105500 Rh7CG107300 Rh7DG104900
rosa_wichuraiana	Rw2G044460 Rw7G008890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1054
Acc36I	ACCTGC	1 cut(s)	2008
Acc65I	GGTACC	1 cut(s)	1160
AccB1I	GGYRCC	1 cut(s)	1160
AccB7I	CCANNNNNTGG	1 cut(s)	360
AccI	GTMKAC	1 cut(s)	1058
AccII	CGCG	2 cut(s)	555, 933
AciI	CCGC	8 cut(s)	655, 901, 931, 933, 1389, 1455, 1521, 1907
AclWI	GGATC	4 cut(s)	339, 429, 515, 1296
AcoI	YGGCCR	1 cut(s)	928
AcsI	RAATTY	2 cut(s)	30, 370
AcuI	CTGAAG	3 cut(s)	1137, 1347, 1635
AfaI	GTAC	7 cut(s)	163, 332, 766, 1000, 1162, 1267, 1687
AfiI	CCNNNNNNNGG	5 cut(s)	360, 1356, 1422, 1488, 1697
AflII	CTTAAG	1 cut(s)	1847
AflIII	ACRYGT	2 cut(s)	1243, 1549
AhdI	GACNNNNNGTC	1 cut(s)	88
AjiI	CACGTC	1 cut(s)	184
AjuI	GAANNNNNNNTTGG	2 cut(s)	356, 388
AloI	GAACNNNNNNTCC	2 cut(s)	413, 445
AluBI	AGCT	7 cut(s)	505, 974, 1320, 1634, 1838, 1897, 2014
AluI	AGCT	7 cut(s)	505, 974, 1320, 1634, 1838, 1897, 2014
Alw21I	GWGCWC	2 cut(s)	272, 705
Alw26I	GTCTC	4 cut(s)	75, 334, 1121, 1174
AlwI	GGATC	4 cut(s)	339, 429, 515, 1296
Ama87I	CYCGRG	1 cut(s)	456
AoxI	GGCC	1 cut(s)	928
ApeKI	GCWGC	7 cut(s)	638, 800, 914, 1085, 1771, 1975, 2014
ApoI	RAATTY	2 cut(s)	30, 370
ArsI	GACNNNNNNTTYG	2 cut(s)	1712, 1744
Asp700I	GAANNNNTTC	1 cut(s)	2028
Asp718I	GGTACC	1 cut(s)	1160
AspS9I	GGNCC	1 cut(s)	1628
AsuC2I	CCSGG	1 cut(s)	1306
AsuHPI	GGTGA	4 cut(s)	387, 416, 802, 1401
AvaI	CYCGRG	1 cut(s)	456
AvaII	GGWCC	1 cut(s)	1628
BaeI	ACNNNNGTAYC	4 cut(s)	276, 309, 374, 407
BanI	GGYRCC	1 cut(s)	1160
BarI	GAAGNNNNNNTAC	2 cut(s)	1320, 1352
BbsI	GAAGAC	1 cut(s)	420
Bbv12I	GWGCWC	2 cut(s)	272, 705
BbvI	GCAGC	7 cut(s)	650, 787, 901, 1072, 1783, 1987, 2001
BccI	CCATC	5 cut(s)	209, 671, 767, 920, 1619
BceAI	ACGGC	1 cut(s)	1233
BciVI	GTATCC	1 cut(s)	771
BcnI	CCSGG	1 cut(s)	1306
BcoDI	GTCTC	4 cut(s)	75, 334, 1121, 1174
BfaI	CTAG	3 cut(s)	405, 762, 1533
BfmI	CTRYAG	2 cut(s)	915, 2015
BfrI	CTTAAG	1 cut(s)	1847
BfuAI	ACCTGC	1 cut(s)	2008
BfuI	GTATCC	1 cut(s)	771
BglI	GCCNNNNNGGC	1 cut(s)	898
BmcAI	AGTACT	1 cut(s)	766
Bme1390I	CCNGG	1 cut(s)	1306
Bme18I	GGWCC	1 cut(s)	1628
BmeRI	GACNNNNNGTC	1 cut(s)	88
BmeT110I	CYCGRG	1 cut(s)	456
BmgBI	CACGTC	1 cut(s)	184
BmgT120I	GGNCC	1 cut(s)	1628
BmiI	GGNNCC	3 cut(s)	1162, 1702, 1833
BmrFI	CCNGG	1 cut(s)	1306
BmsI	GCATC	5 cut(s)	505, 778, 820, 1340, 1848
BpiI	GAAGAC	1 cut(s)	420
BpmI	CTGGAG	1 cut(s)	1818
BpuEI	CTTGAG	2 cut(s)	407, 1040
BpuMI	CCSGG	1 cut(s)	1306
BsaBI	GATNNNNATC	1 cut(s)	519
BsaI	GGTCTC	1 cut(s)	1174
BsaJI	CCNNGG	4 cut(s)	448, 783, 931, 1305
BsaWI	WCCGGW	1 cut(s)	1250
Bsc4I	CCNNNNNNNGG	5 cut(s)	360, 1356, 1422, 1488, 1697
Bse118I	RCCGGY	1 cut(s)	615
Bse1I	ACTGG	3 cut(s)	427, 1058, 1704
Bse8I	GATNNNNATC	1 cut(s)	519
BseDI	CCNNGG	4 cut(s)	448, 783, 931, 1305
BseGI	GGATG	7 cut(s)	66, 342, 490, 700, 793, 835, 1972
BseJI	GATNNNNATC	1 cut(s)	519
BseLI	CCNNNNNNNGG	5 cut(s)	360, 1356, 1422, 1488, 1697
BseNI	ACTGG	3 cut(s)	427, 1058, 1704
BseRI	GAGGAG	2 cut(s)	280, 643
BseXI	GCAGC	7 cut(s)	650, 787, 901, 1072, 1783, 1987, 2001
BseYI	CCCAGC	1 cut(s)	353
BsgI	GTGCAG	2 cut(s)	1071, 1790
Bsh1236I	CGCG	2 cut(s)	555, 933
BshFI	GGCC	1 cut(s)	930
BshNI	GGYRCC	1 cut(s)	1160
BsiHKAI	GWGCWC	2 cut(s)	272, 705
BsiHKCI	CYCGRG	1 cut(s)	456
BsiSI	CCGG	3 cut(s)	616, 1251, 1305
BslFI	GGGAC	3 cut(s)	718, 1169, 1550
BslI	CCNNNNNNNGG	5 cut(s)	360, 1356, 1422, 1488, 1697
BsmAI	GTCTC	4 cut(s)	75, 334, 1121, 1174
BsmBI	CGTCTC	1 cut(s)	334
BsmFI	GGGAC	3 cut(s)	718, 1169, 1550
BsnI	GGCC	1 cut(s)	930
Bso31I	GGTCTC	1 cut(s)	1174
BsoBI	CYCGRG	1 cut(s)	456
Bsp1286I	GDGCHC	2 cut(s)	272, 705
Bsp1407I	TGTACA	1 cut(s)	1685
Bsp143I	GATC	4 cut(s)	344, 421, 520, 1301
Bsp68I	TCGCGA	1 cut(s)	555
BspACI	CCGC	8 cut(s)	655, 901, 931, 933, 1389, 1455, 1521, 1907
BspANI	GGCC	1 cut(s)	930
BspFNI	CGCG	2 cut(s)	555, 933
BspHI	TCATGA	2 cut(s)	976, 1792
BspLI	GGNNCC	3 cut(s)	1162, 1702, 1833
BspMAI	CTGCAG	2 cut(s)	919, 2019
BspMI	ACCTGC	1 cut(s)	2008
BspPI	GGATC	4 cut(s)	339, 429, 515, 1296
BspQI	GCTCTTC	1 cut(s)	1327
BspT107I	GGYRCC	1 cut(s)	1160
BspTI	CTTAAG	1 cut(s)	1847
BspTNI	GGTCTC	1 cut(s)	1174
BsrFI	RCCGGY	1 cut(s)	615
BsrGI	TGTACA	1 cut(s)	1685
BsrI	ACTGG	3 cut(s)	427, 1058, 1704
BssAI	RCCGGY	1 cut(s)	615
BssECI	CCNNGG	4 cut(s)	448, 783, 931, 1305
BssMI	GATC	4 cut(s)	344, 421, 520, 1301
BssT1I	CCWWGG	2 cut(s)	448, 783
Bst4CI	ACNGT	7 cut(s)	289, 498, 585, 808, 1160, 1270, 1946
Bst6I	CTCTTC	2 cut(s)	1327, 1986
BstAFI	CTTAAG	1 cut(s)	1847
BstAUI	TGTACA	1 cut(s)	1685
BstC8I	GCNNGC	2 cut(s)	1347, 1479
BstDSI	CCRYGG	1 cut(s)	931
BstEII	GGTNACC	1 cut(s)	393
BstF5I	GGATG	7 cut(s)	66, 342, 490, 700, 793, 835, 1972
BstFNI	CGCG	2 cut(s)	555, 933
BstKTI	GATC	4 cut(s)	347, 424, 523, 1304
BstMAI	GTCTC	4 cut(s)	75, 334, 1121, 1174
BstMBI	GATC	4 cut(s)	344, 421, 520, 1301
BstMWI	GCNNNNNNNGC	2 cut(s)	797, 898
BstNSI	RCATGY	3 cut(s)	91, 1247, 1553
BstPI	GGTNACC	1 cut(s)	393
BstSCI	CCNGG	1 cut(s)	1304
BstSFI	CTRYAG	2 cut(s)	915, 2015
BstUI	CGCG	2 cut(s)	555, 933
BstV1I	GCAGC	7 cut(s)	650, 787, 901, 1072, 1783, 1987, 2001
BstV2I	GAAGAC	1 cut(s)	420
BstX2I	RGATCY	1 cut(s)	1301
BstYI	RGATCY	1 cut(s)	1301
BsuI	GTATCC	1 cut(s)	771
BsuRI	GGCC	1 cut(s)	930
BtgI	CCRYGG	1 cut(s)	931
BtgZI	GCGATG	1 cut(s)	570
BtrI	CACGTC	1 cut(s)	184
BtsCI	GGATG	7 cut(s)	66, 342, 490, 700, 793, 835, 1972
BtsIMutI	CAGTG	1 cut(s)	1275
BtuMI	TCGCGA	1 cut(s)	555
BveI	ACCTGC	1 cut(s)	2008
Cac8I	GCNNGC	2 cut(s)	1347, 1479
CciI	TCATGA	2 cut(s)	976, 1792
Cfr10I	RCCGGY	1 cut(s)	615
Cfr13I	GGNCC	1 cut(s)	1628
Cfr42I	CCGCGG	1 cut(s)	934
Csp6I	GTAC	7 cut(s)	162, 331, 765, 999, 1161, 1266, 1686
CviQI	GTAC	7 cut(s)	162, 331, 765, 999, 1161, 1266, 1686
DpnI	GATC	4 cut(s)	346, 423, 522, 1303
DpnII	GATC	4 cut(s)	344, 421, 520, 1301
DraI	TTTAAA	1 cut(s)	154
DrdI	GACNNNNNNGTC	1 cut(s)	1054
DriI	GACNNNNNGTC	1 cut(s)	88
DseDI	GACNNNNNNGTC	1 cut(s)	1054
EaeI	YGGCCR	1 cut(s)	928
Eam1104I	CTCTTC	2 cut(s)	1327, 1986
Eam1105I	GACNNNNNGTC	1 cut(s)	88
EarI	CTCTTC	2 cut(s)	1327, 1986
Eco130I	CCWWGG	2 cut(s)	448, 783
Eco31I	GGTCTC	1 cut(s)	1174
Eco47I	GGWCC	1 cut(s)	1628
Eco57I	CTGAAG	3 cut(s)	1137, 1347, 1635
Eco88I	CYCGRG	1 cut(s)	456
Eco91I	GGTNACC	1 cut(s)	393
EcoO65I	GGTNACC	1 cut(s)	393
EcoT14I	CCWWGG	2 cut(s)	448, 783
EcoT22I	ATGCAT	1 cut(s)	1611
ErhI	CCWWGG	2 cut(s)	448, 783
Esp3I	CGTCTC	1 cut(s)	334
FaqI	GGGAC	3 cut(s)	718, 1169, 1550
FblI	GTMKAC	1 cut(s)	1058
FokI	GGATG	7 cut(s)	73, 349, 497, 707, 800, 842, 1979
FspBI	CTAG	3 cut(s)	405, 762, 1533
GsaI	CCCAGC	1 cut(s)	357
GsuI	CTGGAG	1 cut(s)	1818
HaeIII	GGCC	1 cut(s)	930
HapII	CCGG	3 cut(s)	616, 1251, 1305
HincII	GTYRAC	2 cut(s)	1108, 1290
HindII	GTYRAC	2 cut(s)	1108, 1290
HinfI	GANTC	9 cut(s)	64, 877, 1313, 1397, 1463, 1529, 1670, 1789, 2024
HpaII	CCGG	3 cut(s)	616, 1251, 1305
HphI	GGTGA	4 cut(s)	387, 416, 802, 1401
Hpy166II	GTNNAC	6 cut(s)	1059, 1108, 1190, 1290, 1686, 1688
Hpy188I	TCNGA	8 cut(s)	15, 438, 542, 674, 1150, 1198, 1327, 1654
Hpy188III	TCNNGA	9 cut(s)	68, 405, 554, 977, 1014, 1177, 1617, 1793, 1927
Hpy8I	GTNNAC	6 cut(s)	1059, 1108, 1190, 1290, 1686, 1688
Hpy99I	CGWCG	2 cut(s)	1095, 1983
HpyAV	CCTTC	6 cut(s)	485, 685, 820, 1096, 1416, 1482
HpyCH4III	ACNGT	7 cut(s)	289, 498, 585, 808, 1160, 1270, 1946
HpyCH4IV	ACGT	5 cut(s)	183, 1093, 1186, 1368, 1500
HpyF10VI	GCNNNNNNNGC	2 cut(s)	797, 898
HpySE526I	ACGT	5 cut(s)	183, 1093, 1186, 1368, 1500
KpnI	GGTACC	1 cut(s)	1164
KspI	CCGCGG	1 cut(s)	934
Kzo9I	GATC	4 cut(s)	344, 421, 520, 1301
LguI	GCTCTTC	1 cut(s)	1327
LmnI	GCTCC	4 cut(s)	267, 320, 502, 1837
Lsp1109I	GCAGC	7 cut(s)	650, 787, 901, 1072, 1783, 1987, 2001
LweI	GCATC	5 cut(s)	505, 778, 820, 1340, 1848
MaeI	CTAG	3 cut(s)	405, 762, 1533
MaeII	ACGT	5 cut(s)	183, 1093, 1186, 1368, 1500
MaeIII	GTNAC	4 cut(s)	393, 742, 808, 1636
MalI	GATC	4 cut(s)	346, 423, 522, 1303
MboI	GATC	4 cut(s)	344, 421, 520, 1301
MfeI	CAATTG	1 cut(s)	129
MflI	RGATCY	1 cut(s)	1301
MhlI	GDGCHC	2 cut(s)	272, 705
MmeI	TCCRAC	1 cut(s)	480
Mph1103I	ATGCAT	1 cut(s)	1611
MroXI	GAANNNNTTC	1 cut(s)	2028
MseI	TTAA	4 cut(s)	153, 888, 1746, 1848
MslI	CAYNNNNRTG	1 cut(s)	846
MspA1I	CMGCKG	3 cut(s)	933, 1634, 1838
MspCI	CTTAAG	1 cut(s)	1847
MspI	CCGG	3 cut(s)	616, 1251, 1305
MspR9I	CCNGG	1 cut(s)	1306
MunI	CAATTG	1 cut(s)	129
MvnI	CGCG	2 cut(s)	555, 933
MwoI	GCNNNNNNNGC	2 cut(s)	797, 898
NciI	CCSGG	1 cut(s)	1306
NdeII	GATC	4 cut(s)	344, 421, 520, 1301
NlaIV	GGNNCC	3 cut(s)	1162, 1702, 1833
NmuCI	GTSAC	4 cut(s)	393, 742, 808, 1636
NruI	TCGCGA	1 cut(s)	555
NsiI	ATGCAT	1 cut(s)	1611
NspI	RCATGY	3 cut(s)	91, 1247, 1553
PaeR7I	CTCGAG	1 cut(s)	456
PagI	TCATGA	2 cut(s)	976, 1792
PciI	ACATGT	2 cut(s)	1243, 1549
PciSI	GCTCTTC	1 cut(s)	1327
PdmI	GAANNNNTTC	1 cut(s)	2028
PfeI	GAWTC	9 cut(s)	64, 877, 1313, 1397, 1463, 1529, 1670, 1789, 2024
PflMI	CCANNNNNTGG	1 cut(s)	360
PscI	ACATGT	2 cut(s)	1243, 1549
PspEI	GGTNACC	1 cut(s)	393
PspFI	CCCAGC	1 cut(s)	353
PspN4I	GGNNCC	3 cut(s)	1162, 1702, 1833
PspPI	GGNCC	1 cut(s)	1628
PspXI	VCTCGAGB	1 cut(s)	456
PstI	CTGCAG	2 cut(s)	919, 2019
PsuI	RGATCY	1 cut(s)	1301
PvuII	CAGCTG	2 cut(s)	1634, 1838
RruI	TCGCGA	1 cut(s)	555
RsaI	GTAC	7 cut(s)	163, 332, 766, 1000, 1162, 1267, 1687
RsaNI	GTAC	7 cut(s)	162, 331, 765, 999, 1161, 1266, 1686
RseI	CAYNNNNRTG	1 cut(s)	846
SacII	CCGCGG	1 cut(s)	934
SapI	GCTCTTC	1 cut(s)	1327
SaqAI	TTAA	4 cut(s)	153, 888, 1746, 1848
Sau3AI	GATC	4 cut(s)	344, 421, 520, 1301
Sau96I	GGNCC	1 cut(s)	1628
ScaI	AGTACT	1 cut(s)	766
ScrFI	CCNGG	1 cut(s)	1306
SduI	GDGCHC	2 cut(s)	272, 705
SfaNI	GCATC	5 cut(s)	505, 778, 820, 1340, 1848
SfcI	CTRYAG	2 cut(s)	915, 2015
Sfr274I	CTCGAG	1 cut(s)	456
Sfr303I	CCGCGG	1 cut(s)	934
SgrBI	CCGCGG	1 cut(s)	934
SinI	GGWCC	1 cut(s)	1628
SlaI	CTCGAG	1 cut(s)	456
SmiMI	CAYNNNNRTG	1 cut(s)	846
SmlI	CTYRAG	4 cut(s)	386, 456, 1019, 1847
SmoI	CTYRAG	4 cut(s)	386, 456, 1019, 1847
SsiI	CCGC	8 cut(s)	655, 901, 931, 933, 1389, 1455, 1521, 1907
SspMI	CTAG	3 cut(s)	405, 762, 1533
StyD4I	CCNGG	1 cut(s)	1304
StyI	CCWWGG	2 cut(s)	448, 783
TaaI	ACNGT	7 cut(s)	289, 498, 585, 808, 1160, 1270, 1946
TaiI	ACGT	5 cut(s)	186, 1096, 1189, 1371, 1503
TaqI	TCGA	3 cut(s)	457, 666, 880
TatI	WGTACW	3 cut(s)	764, 1265, 1685
TauI	GCSGC	3 cut(s)	658, 904, 933
TfiI	GAWTC	9 cut(s)	64, 877, 1313, 1397, 1463, 1529, 1670, 1789, 2024
Tru1I	TTAA	4 cut(s)	153, 888, 1746, 1848
Tru9I	TTAA	4 cut(s)	153, 888, 1746, 1848
TscAI	CASTG	1 cut(s)	1275
TseFI	GTSAC	4 cut(s)	393, 742, 808, 1636
TseI	GCWGC	7 cut(s)	638, 800, 914, 1085, 1771, 1975, 2014
Tsp45I	GTSAC	4 cut(s)	393, 742, 808, 1636
TspDTI	ATGAA	8 cut(s)	77, 324, 455, 504, 573, 1577, 1809, 2004
TspGWI	ACGGA	3 cut(s)	36, 1196, 1979
TspRI	CASTG	1 cut(s)	1275
Van91I	CCANNNNNTGG	1 cut(s)	360
Vha464I	CTTAAG	1 cut(s)	1847
VpaK11BI	GGWCC	1 cut(s)	1628
XapI	RAATTY	2 cut(s)	30, 370
XbaI	TCTAGA	1 cut(s)	404
XceI	RCATGY	3 cut(s)	91, 1247, 1553
XhoI	CTCGAG	1 cut(s)	456
XmiI	GTMKAC	1 cut(s)	1058
XmnI	GAANNNNTTC	1 cut(s)	2028
XspI	CTAG	3 cut(s)	405, 762, 1533
ZrmI	AGTACT	1 cut(s)	766
Zsp2I	ATGCAT	1 cut(s)	1611

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.