Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0002310

Physical Location & Seq

Genomic Coordinates Reverse (-)

13476772 .. 13483475

Gene Structure 6704 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G147000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2526 bp

ATGGAAGCCACGGTGAAGCAGGAGCTTCTGGAAACTTCTAATGTTCCACATCCTACGGGGAAACCAAACGGCGTCACTTCGAAGGTGGTGCCACCACCAGGGTGGGTAATCGATCTGAGCACGAGTAGTAGCAGCAGCAGCAGTAGCGGCGAGTCGGACTCGGACGATTCGGACGATGTCGGAGGCGTTTCGGGGGGTTTGGCGAAGAAGAGGAAGCGAGACGGGATGGGTGTCGTTTTGCCGGTTGGTTTTCTGAGTCCTCTGCCGCCGGAGGGGGTGGCGCCGATGCTTCCGGCGCCAGATGCGGCTGTAACGCGCGTCGAAAATACTGGGGTGGTCAGTCGGCCTAGATGTAAGCAGTTTTGGAAGGCTGGGGATTATGAGGGAGCTCCTTGTGGCAACTGGGAATCTACTGCTGGTGGGATGGACCATGTCAGGGTTCATCCGAAGTTTTTGCATTCCAACGCAACAAGCCATAAGTGGGCTCTTGGAGCTTTTGCAGAGCTCTTAGACAATGCGTTGGATGAGGTTTGTAGTGGTGCGACATATGTTAACCTAGATATGGTTGAAAATAAGAAAGACCAAAGCAGAATGTTGCTGATTGAAGATAACGGTGGTGGGATGGATCCCGATAAGATGCGGCACTGCATGTCATTGGGGTATTCTGCGAAAAGCAAAGTTGCGAACACTATAGGACAATATGGAAATGGTTTTAAAACAAGCACCATGAGGCTCGGAGCAGATGTAATCGTGTTCTCTCGTTGCAATGGAAAAGATGGAAAAAGTGCAACACAGAGCATTGGATTGCTGTCTTACACATTTTTGAAGAGCACGGGAAAGGAAGATATTGTAGTTCCCATGCTTGATTATGAGAGAAGACAAGGGGCTTGGAGCAAGATGTTACGATCCTCTCTAAGTGATTGGAACAAAAATGTGGAAACAATAGTTCAATGGTCACCATTTTCTAATGAAGAAGACCTGCATCATCAGTTCTATATGATGAAAAACCATGGCACCCGAATTATCATATACAACCTTTGGGAGGATGATGAAGGACAGCTGGAGCTGGATTTCGATGCTGATCCACATGATATTCAAATTAGAGGTGTCAATCGAGCTGAAAAGAATATACAAATGGCTAAAGAATTTCCCAACTCTCGTTTTTTCTTGACCTACCGGCACTCATTGAGGAGCTATGCATCAATTCTCTATTTGCGGCTTCCTCATAACTTCCGAATCATTCTTCGTGGGAAGGATGTTGAGCACCACAACATAGTGAATGATATGATGATGTCCCAGCAAGTCACATATCGGCCACAGCCTGGTGCTGATGGGATTCCAAAGGAGTCAAATATGGTTGCCGTTGTCACCATTGGGTTTGTGAAGGATGCAAAACATCACATCGATGTTCAAGGGTTCAATGTTTATCACAAAAATCGACTGATTAAGCCATTTTGGAGGCTTTGGAATGCTGCAGGAAGTGACGGCCGTGGTGTTATAGGTCTCTTAGAAGCCAATTTTGTTGAACCAGCACATGATAAACAGGGTTTTGAGCGTACAACAGTTCTTTCAAGACTCGAGGGAAAATTGATAACTATGCAAAAGAATTACTGGAATAATTATTGTCATAAAATTGGCTATGCTCCAAGGCGTAATAAGAAGCTTATCAACGGCTCTGCAGATAAAGTGACTTCTGATTATTTTCCTGAAACTTCTCCCTCTAAAACGAATGGTGCTACTAAGTCAGGCAGCAAGAGACCATTATCAGTTCCTGACAAGCTCCGTTCACATGCATTTCAGAAAGTTGATTTAAAATCTTCAAAAAGATTTTCTAAACAAGCGTACCATGGGCATGCGACTGTACATATTTCTGATGAAGGCACACATAGAGTGCAAACGCCCACAAAATCTGGGGAAGGATCATCAAGTTCTTCTGAACCATCACCACCTTCGACAGCCATGTCTGATAAGCAAGAAAATGACAGTAGTCATAAGGGATTTGCTACTAAAAAAGATTCCGGGAAAGATGGCCAGGGTGTGACTCGGTTATCTTCATGCACGGAAGATATTCAGTCTCAGCAAGATTGTTGGCCATGTGGGGGAACCAATCTGCCCACCTCACGTTCCAAGTCAAAGGGGAATAATGTCAATGGTGATTGTTCTGTCTTGGAGGGTGATTTAGGCGTAGTGGAGCAATTGAGAAAAGAGAATTGTGAACTGAAGGAAAGATTGGAGAAAAAGGATGGGGCAGCTTCAGCTGATTTGCTGCAGGACTTGCAGTGTGAAAGGGATAGGTGCAAGTCACTTGAAACTCAGCTCCAAGCGGCACAACAAAAAATTGTGGAAATGAACAAGGAACAAGACACTCTAATTGGGATATTCTCCGAGGAGAGGGAACGACGAGACAATGAAGAGGCCAATTTGAGAAAGAAGCTGCAGGATGCATCCAATACGATTGAAGAATTGCTGGACAAGGTAAGGGCACTGGAAGTAATGAAGTCTGCTAATTTCAAATCCAATAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006282 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016020 GO:0016462 GO:0016604 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0031935 GO:0031974 GO:0031981 GO:0032101 GO:0032103 GO:0033043 GO:0033044 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043621 GO:0043900 GO:0043902 GO:0044030 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051052 GO:0051128 GO:0051171 GO:0051252 GO:0060255 GO:0060968 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1902275 GO:1902288 GO:1902290 GO:1903506 GO:2000112 GO:2001020 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c_3

Protein Analysis

842

Amino Acids

93.38

Weight (kDa)

8.06

Isoelectric Point (pI)

45.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24970 AT5G50780 AT5G50780 AT5G50780
fragaria_vesca	FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_6g42820
malus_domestica	MD06G1137200.v1.1 MD09G1078200.v1.1 MD14G1151900.v1.1 MD17G1068200.v1.1 MD17G1068600.v1.1
prunus_persica	Prupe.5G147000_v2.0.a1 Prupe.5G147000_v2.0.a1 Prupe.5G147000_v2.0.a1
pyrus_communis	pycom06g12840 pycom14g12650 pycom17g06890
rosa_chinensis	RchiOBHm_Chr2g0158661 RchiOBHm_Chr7g0189451
rosa_laevigata	RLG00000004610 RLG00000021104
rosa_multiflora	Rmu_sc0004188.1_g000012
rosa_roxburghii	Rroxscaffold_2G00091130 Rroxscaffold_3G00265430
rosa_rugosa	Rorug02G0471200 Rorug06G0498000 Rorug06G0498100
rosa_samantha	Rh2AG537000 Rh2BG550200 Rh2CG520700 Rh2DG559800 Rh7AG102800 Rh7BG105500 Rh7CG107300 Rh7DG104900
rosa_wichuraiana	Rw2G044460 Rw7G008890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1960
Acc36I	ACCTGC	1 cut(s)	987
AccB1I	GGYRCC	4 cut(s)	88, 280, 295, 1013
AccB7I	CCANNNNNTGG	1 cut(s)	1322
AccII	CGCG	2 cut(s)	316, 318
AciI	CCGC	6 cut(s)	147, 266, 305, 640, 1216, 2324
AclWI	GGATC	5 cut(s)	620, 633, 900, 1076, 1927
AcoI	YGGCCR	4 cut(s)	1313, 1486, 2029, 2090
AcsI	RAATTY	1 cut(s)	1145
AcuI	CTGAAG	2 cut(s)	2238, 2240
AcyI	GRCGYC	3 cut(s)	72, 281, 296
AfaI	GTAC	3 cut(s)	1558, 1844, 1863
AfiI	CCNNNNNNNGG	9 cut(s)	98, 272, 436, 481, 562, 1042, 1322, 2099, 2391
AjnI	CCWGG	3 cut(s)	97, 1321, 2031
AjuI	GAANNNNNNNTTGG	2 cut(s)	2213, 2245
AleI	CACNNNNGTG	1 cut(s)	100
Alw21I	GWGCWC	5 cut(s)	122, 391, 507, 833, 1266
Alw26I	GTCTC	5 cut(s)	213, 1508, 1750, 2079, 2397
AlwI	GGATC	5 cut(s)	620, 633, 900, 1076, 1927
AlwNI	CAGNNNCTG	1 cut(s)	1772
Ama87I	CYCGRG	1 cut(s)	1577
AoxI	GGCC	6 cut(s)	344, 1313, 1486, 2029, 2090, 2415
ApeKI	GCWGC	8 cut(s)	132, 135, 138, 1472, 1749, 2249, 2266, 2434
ApoI	RAATTY	1 cut(s)	1145
Asp700I	GAANNNNTTC	1 cut(s)	2067
AspLEI	GCGC	3 cut(s)	283, 298, 318
AspS9I	GGNCC	1 cut(s)	427
AsuC2I	CCSGG	1 cut(s)	2020
AsuHPI	GGTGA	6 cut(s)	25, 948, 1360, 1935, 2165, 2186
AsuII	TTCGAA	1 cut(s)	80
AvaI	CYCGRG	1 cut(s)	1577
AvaII	GGWCC	1 cut(s)	427
BaeGI	GKGCMC	1 cut(s)	2485
BaeI	ACNNNNGTAYC	2 cut(s)	1826, 1859
BalI	TGGCCA	2 cut(s)	2031, 2092
BamHI	GGATCC	1 cut(s)	625
BanI	GGYRCC	4 cut(s)	88, 280, 295, 1013
BanII	GRGCYC	3 cut(s)	391, 487, 507
BauI	CACGAG	1 cut(s)	121
BbsI	GAAGAC	2 cut(s)	883, 981
Bbv12I	GWGCWC	5 cut(s)	122, 391, 507, 833, 1266
BbvI	GCAGC	8 cut(s)	144, 147, 150, 1459, 1761, 2253, 2261, 2421
BccI	CCATC	8 cut(s)	220, 418, 616, 770, 1325, 1948, 2021, 2237
BceAI	ACGGC	5 cut(s)	85, 1346, 1473, 1501, 1687
BcgI	CGANNNNNNTGC	4 cut(s)	70, 104, 436, 470
BciT130I	CCWGG	3 cut(s)	99, 1323, 2033
BcnI	CCSGG	1 cut(s)	2020
BcoDI	GTCTC	5 cut(s)	213, 1508, 1750, 2079, 2397
BfaI	CTAG	2 cut(s)	348, 557
BfmI	CTRYAG	5 cut(s)	690, 1473, 1677, 2267, 2435
BfoI	RGCGCY	2 cut(s)	284, 299
BfuAI	ACCTGC	1 cut(s)	987
Bme1390I	CCNGG	4 cut(s)	99, 1323, 2020, 2033
Bme18I	GGWCC	1 cut(s)	427
BmeT110I	CYCGRG	1 cut(s)	1577
BmgT120I	GGNCC	1 cut(s)	427
BmiI	GGNNCC	6 cut(s)	90, 282, 297, 627, 1015, 2104
BmrFI	CCNGG	4 cut(s)	99, 1323, 2020, 2033
BmrI	ACTGGG	2 cut(s)	339, 412
BmsI	GCATC	9 cut(s)	276, 292, 627, 991, 1066, 1208, 1378, 2431, 2453
BmuI	ACTGGG	2 cut(s)	339, 412
BoxI	GACNNNNGTC	1 cut(s)	1986
BpiI	GAAGAC	2 cut(s)	883, 981
BplI	GAGNNNNNCTC	2 cut(s)	143, 175
BpmI	CTGGAG	1 cut(s)	1082
Bpu14I	TTCGAA	1 cut(s)	80
BpuMI	CCSGG	1 cut(s)	2020
Bsa29I	ATCGAT	2 cut(s)	111, 1404
BsaBI	GATNNNNATC	1 cut(s)	1080
BsaHI	GRCGYC	3 cut(s)	72, 281, 296
BsaI	GGTCTC	2 cut(s)	1508, 1750
BsaJI	CCNNGG	8 cut(s)	9, 98, 1009, 1489, 1646, 1846, 2032, 2385
BsaXI	ACNNNNNCTCC	2 cut(s)	729, 759
Bsc4I	CCNNNNNNNGG	9 cut(s)	98, 272, 436, 481, 562, 1042, 1322, 2099, 2391
Bse118I	RCCGGY	2 cut(s)	241, 1176
Bse1I	ACTGG	4 cut(s)	334, 407, 1616, 2490
Bse3DI	GCAATG	1 cut(s)	772
Bse8I	GATNNNNATC	1 cut(s)	1080
BseBI	CCWGG	3 cut(s)	99, 1323, 2033
BseCI	ATCGAT	2 cut(s)	111, 1404
BseDI	CCNNGG	8 cut(s)	9, 98, 1009, 1489, 1646, 1846, 2032, 2385
BseJI	GATNNNNATC	1 cut(s)	1080
BseLI	CCNNNNNNNGG	9 cut(s)	98, 272, 436, 481, 562, 1042, 1322, 2099, 2391
BseMI	GCAATG	1 cut(s)	772
BseMII	CTCAG	4 cut(s)	107, 245, 2090, 2327
BseNI	ACTGG	4 cut(s)	334, 407, 1616, 2490
BseRI	GAGGAG	2 cut(s)	1204, 2402
BseSI	GKGCMC	1 cut(s)	2485
BseX3I	CGGCCG	1 cut(s)	1486
BseXI	GCAGC	8 cut(s)	144, 147, 150, 1459, 1761, 2253, 2261, 2421
BseYI	CCCAGC	2 cut(s)	371, 1296
Bsh1236I	CGCG	2 cut(s)	316, 318
Bsh1285I	CGRYCG	1 cut(s)	1489
BshFI	GGCC	6 cut(s)	346, 1315, 1488, 2031, 2092, 2417
BshNI	GGYRCC	4 cut(s)	88, 280, 295, 1013
BshVI	ATCGAT	2 cut(s)	111, 1404
BsiEI	CGRYCG	1 cut(s)	1489
BsiHKAI	GWGCWC	5 cut(s)	122, 391, 507, 833, 1266
BsiHKCI	CYCGRG	1 cut(s)	1577
BsiSI	CCGG	5 cut(s)	242, 269, 293, 1177, 2019
BslFI	GGGAC	1 cut(s)	1279
BslI	CCNNNNNNNGG	9 cut(s)	98, 272, 436, 481, 562, 1042, 1322, 2099, 2391
BsmAI	GTCTC	5 cut(s)	213, 1508, 1750, 2079, 2397
BsmBI	CGTCTC	1 cut(s)	213
BsmFI	GGGAC	1 cut(s)	1279
BsmI	GAATGC	2 cut(s)	457, 1474
BsnI	GGCC	6 cut(s)	346, 1315, 1488, 2031, 2092, 2417
Bso31I	GGTCTC	2 cut(s)	1508, 1750
BsoBI	CYCGRG	1 cut(s)	1577
Bsp119I	TTCGAA	1 cut(s)	80
Bsp1286I	GDGCHC	7 cut(s)	122, 391, 487, 507, 833, 1266, 2485
Bsp1407I	TGTACA	1 cut(s)	1861
Bsp143I	GATC	5 cut(s)	112, 625, 905, 1081, 1919
Bsp19I	CCATGG	2 cut(s)	1009, 1846
BspACI	CCGC	6 cut(s)	147, 266, 305, 640, 1216, 2324
BspANI	GGCC	6 cut(s)	346, 1315, 1488, 2031, 2092, 2417
BspCNI	CTCAG	4 cut(s)	108, 246, 2089, 2326
BspDI	ATCGAT	2 cut(s)	111, 1404
BspFNI	CGCG	2 cut(s)	316, 318
BspLI	GGNNCC	6 cut(s)	90, 282, 297, 627, 1015, 2104
BspMAI	CTGCAG	4 cut(s)	1477, 1681, 2271, 2439
BspMI	ACCTGC	1 cut(s)	987
BspPI	GGATC	5 cut(s)	620, 633, 900, 1076, 1927
BspQI	GCTCTTC	1 cut(s)	821
BspT104I	TTCGAA	1 cut(s)	80
BspT107I	GGYRCC	4 cut(s)	88, 280, 295, 1013
BspTNI	GGTCTC	2 cut(s)	1508, 1750
BsrDI	GCAATG	1 cut(s)	772
BsrFI	RCCGGY	2 cut(s)	241, 1176
BsrGI	TGTACA	1 cut(s)	1861
BsrI	ACTGG	4 cut(s)	334, 407, 1616, 2490
BssAI	RCCGGY	2 cut(s)	241, 1176
BssECI	CCNNGG	8 cut(s)	9, 98, 1009, 1489, 1646, 1846, 2032, 2385
BssMI	GATC	5 cut(s)	112, 625, 905, 1081, 1919
BssNI	GRCGYC	3 cut(s)	72, 281, 296
BssSI	CACGAG	1 cut(s)	121
BssT1I	CCWWGG	3 cut(s)	1009, 1646, 1846
Bst2BI	CACGAG	1 cut(s)	121
Bst2UI	CCWGG	3 cut(s)	99, 1323, 2033
Bst4CI	ACNGT	5 cut(s)	13, 614, 1564, 1861, 1985
Bst6I	CTCTTC	3 cut(s)	203, 821, 2406
BstACI	GRCGYC	3 cut(s)	72, 281, 296
BstAPI	GCANNNNNTGC	1 cut(s)	2275
BstAUI	TGTACA	1 cut(s)	1861
BstBI	TTCGAA	1 cut(s)	80
BstC8I	GCNNGC	1 cut(s)	1854
BstDEI	CTNAG	8 cut(s)	116, 254, 508, 914, 1507, 1740, 2076, 2313
BstDSI	CCRYGG	4 cut(s)	9, 1009, 1489, 1846
BstEII	GGTNACC	1 cut(s)	954
BstENI	CCTNNNNNAGG	1 cut(s)	1040
BstFNI	CGCG	2 cut(s)	316, 318
BstH2I	RGCGCY	2 cut(s)	284, 299
BstHHI	GCGC	3 cut(s)	283, 298, 318
BstKTI	GATC	5 cut(s)	115, 628, 908, 1084, 1922
BstMAI	GTCTC	5 cut(s)	213, 1508, 1750, 2079, 2397
BstMBI	GATC	5 cut(s)	112, 625, 905, 1081, 1919
BstMCI	CGRYCG	1 cut(s)	1489
BstMWI	GCNNNNNNNGC	8 cut(s)	138, 144, 147, 295, 302, 491, 2255, 2275
BstNI	CCWGG	3 cut(s)	99, 1323, 2033
BstNSI	RCATGY	3 cut(s)	652, 1793, 1856
BstPAI	GACNNNNGTC	1 cut(s)	1986
BstPI	GGTNACC	1 cut(s)	954
BstSCI	CCNGG	4 cut(s)	97, 1321, 2018, 2031
BstSFI	CTRYAG	5 cut(s)	690, 1473, 1677, 2267, 2435
BstSLI	GKGCMC	1 cut(s)	2485
BstUI	CGCG	2 cut(s)	316, 318
BstV1I	GCAGC	8 cut(s)	144, 147, 150, 1459, 1761, 2253, 2261, 2421
BstV2I	GAAGAC	2 cut(s)	883, 981
BstX2I	RGATCY	1 cut(s)	625
BstXI	CCANNNNNNTGG	1 cut(s)	102
BstYI	RGATCY	1 cut(s)	625
BstZI	CGGCCG	1 cut(s)	1486
Bsu15I	ATCGAT	2 cut(s)	111, 1404
BsuRI	GGCC	6 cut(s)	346, 1315, 1488, 2031, 2092, 2417
BsuTUI	ATCGAT	2 cut(s)	111, 1404
BtgI	CCRYGG	4 cut(s)	9, 1009, 1489, 1846
BtsI	GCAGTG	2 cut(s)	643, 2285
BtsIMutI	CAGTG	3 cut(s)	643, 2285, 2483
BveI	ACCTGC	1 cut(s)	987
Cac8I	GCNNGC	1 cut(s)	1854
CaiI	CAGNNNCTG	1 cut(s)	1772
CfoI	GCGC	3 cut(s)	283, 298, 318
Cfr10I	RCCGGY	2 cut(s)	241, 1176
Cfr13I	GGNCC	1 cut(s)	427
ClaI	ATCGAT	2 cut(s)	111, 1404
CseI	GACGC	2 cut(s)	61, 307
Csp6I	GTAC	3 cut(s)	1557, 1843, 1862
CviQI	GTAC	3 cut(s)	1557, 1843, 1862
DdeI	CTNAG	8 cut(s)	116, 254, 508, 914, 1507, 1740, 2076, 2313
DinI	GGCGCC	2 cut(s)	282, 297
DpnI	GATC	5 cut(s)	114, 627, 907, 1083, 1921
DpnII	GATC	5 cut(s)	112, 625, 905, 1081, 1919
DraI	TTTAAA	2 cut(s)	715, 1812
DrdI	GACNNNNNNGTC	1 cut(s)	1960
DseDI	GACNNNNNNGTC	1 cut(s)	1960
EaeI	YGGCCR	4 cut(s)	1313, 1486, 2029, 2090
EagI	CGGCCG	1 cut(s)	1486
Eam1104I	CTCTTC	3 cut(s)	203, 821, 2406
EarI	CTCTTC	3 cut(s)	203, 821, 2406
Ecl136II	GAGCTC	2 cut(s)	389, 505
EclXI	CGGCCG	1 cut(s)	1486
Eco130I	CCWWGG	3 cut(s)	1009, 1646, 1846
Eco24I	GRGCYC	3 cut(s)	391, 487, 507
Eco31I	GGTCTC	2 cut(s)	1508, 1750
Eco47I	GGWCC	1 cut(s)	427
Eco52I	CGGCCG	1 cut(s)	1486
Eco53kI	GAGCTC	2 cut(s)	389, 505
Eco57I	CTGAAG	2 cut(s)	2238, 2240
Eco88I	CYCGRG	1 cut(s)	1577
Eco91I	GGTNACC	1 cut(s)	954
EcoICRI	GAGCTC	2 cut(s)	389, 505
EcoNI	CCTNNNNNAGG	1 cut(s)	1040
EcoO65I	GGTNACC	1 cut(s)	954
EcoRII	CCWGG	3 cut(s)	97, 1321, 2031
EcoT14I	CCWWGG	3 cut(s)	1009, 1646, 1846
EcoT22I	ATGCAT	3 cut(s)	1201, 1795, 2446
EcoT38I	GRGCYC	3 cut(s)	391, 487, 507
EgeI	GGCGCC	2 cut(s)	282, 297
EheI	GGCGCC	2 cut(s)	282, 297
ErhI	CCWWGG	3 cut(s)	1009, 1646, 1846
Esp3I	CGTCTC	1 cut(s)	213
FaqI	GGGAC	1 cut(s)	1279
FauNDI	CATATG	1 cut(s)	547
FriOI	GRGCYC	3 cut(s)	391, 487, 507
FspBI	CTAG	2 cut(s)	348, 557
GlaI	GCGC	3 cut(s)	282, 297, 317
GsaI	CCCAGC	2 cut(s)	375, 1300
GsuI	CTGGAG	1 cut(s)	1082
HaeII	RGCGCY	2 cut(s)	284, 299
HaeIII	GGCC	6 cut(s)	346, 1315, 1488, 2031, 2092, 2417
HapII	CCGG	5 cut(s)	242, 269, 293, 1177, 2019
HgaI	GACGC	2 cut(s)	61, 307
HhaI	GCGC	3 cut(s)	283, 298, 318
Hin1I	GRCGYC	3 cut(s)	72, 281, 296
Hin6I	GCGC	3 cut(s)	281, 296, 316
HinP1I	GCGC	3 cut(s)	281, 296, 316
HincII	GTYRAC	1 cut(s)	553
HindII	GTYRAC	1 cut(s)	553
HindIII	AAGCTT	1 cut(s)	1661
HpaI	GTTAAC	1 cut(s)	553
HpaII	CCGG	5 cut(s)	242, 269, 293, 1177, 2019
HphI	GGTGA	6 cut(s)	25, 948, 1360, 1935, 2165, 2186
Hpy166II	GTNNAC	3 cut(s)	553, 1787, 2216
Hpy188III	TCNNGA	6 cut(s)	29, 629, 1168, 1572, 1706, 1772
Hpy8I	GTNNAC	3 cut(s)	553, 1787, 2216
Hpy99I	CGWCG	2 cut(s)	323, 2403
HpyAV	CCTTC	9 cut(s)	76, 361, 1046, 1246, 1378, 1871, 1910, 1959, 2215
HpyCH4III	ACNGT	5 cut(s)	13, 614, 1564, 1861, 1985
HpyCH4IV	ACGT	1 cut(s)	2122
HpyF10VI	GCNNNNNNNGC	8 cut(s)	138, 144, 147, 295, 302, 491, 2255, 2275
HpyF3I	CTNAG	8 cut(s)	116, 254, 508, 914, 1507, 1740, 2076, 2313
HpySE526I	ACGT	1 cut(s)	2122
Hsp92I	GRCGYC	3 cut(s)	72, 281, 296
HspAI	GCGC	3 cut(s)	281, 296, 316
KasI	GGCGCC	2 cut(s)	280, 295
KspAI	GTTAAC	1 cut(s)	553
Kzo9I	GATC	5 cut(s)	112, 625, 905, 1081, 1919
LguI	GCTCTTC	1 cut(s)	821
Lsp1109I	GCAGC	8 cut(s)	144, 147, 150, 1459, 1761, 2253, 2261, 2421
LweI	GCATC	9 cut(s)	276, 292, 627, 991, 1066, 1208, 1378, 2431, 2453
MaeI	CTAG	2 cut(s)	348, 557
MaeII	ACGT	1 cut(s)	2122
MalI	GATC	5 cut(s)	114, 627, 907, 1083, 1921
MboI	GATC	5 cut(s)	112, 625, 905, 1081, 1919
MfeI	CAATTG	1 cut(s)	2195
MflI	RGATCY	1 cut(s)	625
MhlI	GDGCHC	7 cut(s)	122, 391, 487, 507, 833, 1266, 2485
MlsI	TGGCCA	2 cut(s)	2031, 2092
MluNI	TGGCCA	2 cut(s)	2031, 2092
Mly113I	GGCGCC	2 cut(s)	281, 296
MlyI	GAGTC	6 cut(s)	152, 161, 265, 1355, 1569, 2035
MmeI	TCCRAC	4 cut(s)	135, 160, 486, 501
Mox20I	TGGCCA	2 cut(s)	2031, 2092
Mph1103I	ATGCAT	3 cut(s)	1201, 1795, 2446
MroXI	GAANNNNTTC	1 cut(s)	2067
MscI	TGGCCA	2 cut(s)	2031, 2092
MseI	TTAA	4 cut(s)	552, 714, 1446, 1811
MslI	CAYNNNNRTG	3 cut(s)	100, 1404, 1851
Msp20I	TGGCCA	2 cut(s)	2031, 2092
MspA1I	CMGCKG	2 cut(s)	1060, 2258
MspI	CCGG	5 cut(s)	242, 269, 293, 1177, 2019
MspR9I	CCNGG	4 cut(s)	99, 1323, 2020, 2033
MunI	CAATTG	1 cut(s)	2195
Mva1269I	GAATGC	2 cut(s)	457, 1474
MvaI	CCWGG	3 cut(s)	99, 1323, 2033
MvnI	CGCG	2 cut(s)	316, 318
MwoI	GCNNNNNNNGC	8 cut(s)	138, 144, 147, 295, 302, 491, 2255, 2275
NarI	GGCGCC	2 cut(s)	281, 296
NciI	CCSGG	1 cut(s)	2020
NcoI	CCATGG	2 cut(s)	1009, 1846
NdeI	CATATG	1 cut(s)	547
NdeII	GATC	5 cut(s)	112, 625, 905, 1081, 1919
NlaIV	GGNNCC	6 cut(s)	90, 282, 297, 627, 1015, 2104
NmuCI	GTSAC	8 cut(s)	73, 954, 1303, 1366, 1481, 1687, 2038, 2301
NsiI	ATGCAT	3 cut(s)	1201, 1795, 2446
NspI	RCATGY	3 cut(s)	652, 1793, 1856
NspV	TTCGAA	1 cut(s)	80
OliI	CACNNNNGTG	1 cut(s)	100
PaeI	GCATGC	1 cut(s)	1856
PaeR7I	CTCGAG	1 cut(s)	1577
PciSI	GCTCTTC	1 cut(s)	821
PcsI	WCGNNNNNNNCGW	1 cut(s)	171
PctI	GAATGC	2 cut(s)	457, 1474
PdmI	GAANNNNTTC	1 cut(s)	2067
PfeI	GAWTC	5 cut(s)	167, 407, 1236, 1336, 2015
PflFI	GACNNNGTC	2 cut(s)	176, 431
PflMI	CCANNNNNTGG	1 cut(s)	1322
PfoI	TCCNGGA	1 cut(s)	2018
PleI	GAGTC	6 cut(s)	152, 160, 264, 1354, 1569, 2035
PluTI	GGCGCC	2 cut(s)	284, 299
PpsI	GAGTC	6 cut(s)	152, 160, 264, 1354, 1569, 2035
PshAI	GACNNNNGTC	1 cut(s)	1986
Psp124BI	GAGCTC	2 cut(s)	391, 507
Psp6I	CCWGG	3 cut(s)	97, 1321, 2031
PspEI	GGTNACC	1 cut(s)	954
PspFI	CCCAGC	2 cut(s)	371, 1296
PspGI	CCWGG	3 cut(s)	97, 1321, 2031
PspN4I	GGNNCC	6 cut(s)	90, 282, 297, 627, 1015, 2104
PspPI	GGNCC	1 cut(s)	427
PspXI	VCTCGAGB	1 cut(s)	1577
PstI	CTGCAG	4 cut(s)	1477, 1681, 2271, 2439
PstNI	CAGNNNCTG	1 cut(s)	1772
PsuI	RGATCY	1 cut(s)	625
PsyI	GACNNNGTC	2 cut(s)	176, 431
PvuII	CAGCTG	2 cut(s)	1060, 2258
RsaI	GTAC	3 cut(s)	1558, 1844, 1863
RsaNI	GTAC	3 cut(s)	1557, 1843, 1862
RseI	CAYNNNNRTG	3 cut(s)	100, 1404, 1851
SacI	GAGCTC	2 cut(s)	391, 507
SapI	GCTCTTC	1 cut(s)	821
SaqAI	TTAA	4 cut(s)	552, 714, 1446, 1811
Sau3AI	GATC	5 cut(s)	112, 625, 905, 1081, 1919
Sau96I	GGNCC	1 cut(s)	427
SchI	GAGTC	6 cut(s)	152, 161, 265, 1355, 1569, 2035
ScrFI	CCNGG	4 cut(s)	99, 1323, 2020, 2033
SduI	GDGCHC	7 cut(s)	122, 391, 487, 507, 833, 1266, 2485
SfaNI	GCATC	9 cut(s)	276, 292, 627, 991, 1066, 1208, 1378, 2431, 2453
SfcI	CTRYAG	5 cut(s)	690, 1473, 1677, 2267, 2435
SfoI	GGCGCC	2 cut(s)	282, 297
Sfr274I	CTCGAG	1 cut(s)	1577
SfuI	TTCGAA	1 cut(s)	80
SinI	GGWCC	1 cut(s)	427
SlaI	CTCGAG	1 cut(s)	1577
SmiMI	CAYNNNNRTG	3 cut(s)	100, 1404, 1851
SmlI	CTYRAG	1 cut(s)	1577
SmoI	CTYRAG	1 cut(s)	1577
SphI	GCATGC	1 cut(s)	1856
SsiI	CCGC	6 cut(s)	147, 266, 305, 640, 1216, 2324
SspDI	GGCGCC	2 cut(s)	280, 295
SspMI	CTAG	2 cut(s)	348, 557
SstI	GAGCTC	2 cut(s)	391, 507
StyD4I	CCNGG	4 cut(s)	97, 1321, 2018, 2031
StyI	CCWWGG	3 cut(s)	1009, 1646, 1846
TaaI	ACNGT	5 cut(s)	13, 614, 1564, 1861, 1985
TaiI	ACGT	1 cut(s)	2125
TaqI	TCGA	9 cut(s)	80, 111, 321, 1074, 1114, 1404, 1438, 1578, 1952
TatI	WGTACW	1 cut(s)	1861
TauI	GCSGC	6 cut(s)	150, 268, 308, 643, 1219, 2327
TfiI	GAWTC	5 cut(s)	167, 407, 1236, 1336, 2015
Tru1I	TTAA	4 cut(s)	552, 714, 1446, 1811
Tru9I	TTAA	4 cut(s)	552, 714, 1446, 1811
TscAI	CASTG	3 cut(s)	650, 2285, 2490
TseFI	GTSAC	8 cut(s)	73, 954, 1303, 1366, 1481, 1687, 2038, 2301
TseI	GCWGC	8 cut(s)	132, 135, 138, 1472, 1749, 2249, 2266, 2434
Tsp45I	GTSAC	8 cut(s)	73, 954, 1303, 1366, 1481, 1687, 2038, 2301
TspDTI	ATGAA	9 cut(s)	431, 984, 1016, 1065, 1890, 2043, 2363, 2424, 2510
TspGWI	ACGGA	2 cut(s)	1772, 2075
TspRI	CASTG	3 cut(s)	650, 2285, 2490
Tth111I	GACNNNGTC	2 cut(s)	176, 431
Van91I	CCANNNNNTGG	1 cut(s)	1322
VpaK11BI	GGWCC	1 cut(s)	427
XagI	CCTNNNNNAGG	1 cut(s)	1040
XapI	RAATTY	1 cut(s)	1145
XceI	RCATGY	3 cut(s)	652, 1793, 1856
XcmI	CCANNNNNNNNNTGG	1 cut(s)	99
XhoI	CTCGAG	1 cut(s)	1577
XmnI	GAANNNNTTC	1 cut(s)	2067
XspI	CTAG	2 cut(s)	348, 557
Zsp2I	ATGCAT	3 cut(s)	1201, 1795, 2446

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.