Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0002310

Physical Location & Seq

Genomic Coordinates Reverse (-)

8239618 .. 8246171

Gene Structure 6554 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G008890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2727 bp

ATGGAGGCGGTGGTGAAGCAGGAGCTTCTGAACGACGTGCCGCACTCTTCGCCGAGGCGGAAGGGCGCCATTTCGGCGGTGCCGCCGGACTCGGTAATCGCGCTTGATACGAGCAGTAGTGACTCGGACTCGGAGTCGGAGTCGGAGGAGGAGAACGGGAAGGACGACGCCGTTTTGGGACGCGTGCTGAAGAAGAGGAGGCTGAACGAGATGGGAGTGATTATGCCGGTCTTGGATCCTCTGCCTTCGCCGGAGGAGGAGGAGTTGCCGCGGATGTTGCCGGCGCCGGCGGTGTCCGGGGCCGGGAGGGGGATGTTGAGTGTTAATTACTGCAAGCAGTTTTGGAAGGCTGGGGAGTTTGAGTTAGCGCCTTGTGGCGATGCGGATTCTTCTGCTGGCGGGATGGACCATGTGAGGATTCATCCCAAGTTTCTGCATTCCAATGCAACCAGTCATAAGTGGGCTCTTGGAGCTTTTGCGGAGCTATTAGACAATGCAATAGATGAGGTTTGCACTGGTGCTACTTATGTTAAGGTAGATATGCTTGAAAATCAGAAAGACGGAAGCAGAATGTTGCTGATTGAAGATAATGGTGGTGGGATGAATCCAGATAAGATACGAGACTGCATGTCATTGGGGTTTTCTACAAAGAGCAAAATCGCAAACACAATTGGACAATATGGAAATGGTTTTAAAACAAGTACCATGAGGCTTGGGGCAGACGTGATTGTGTTCTCTCGTTGTTGTGGAAAAGATGGAAAAAGTGCTACGCAGAGCATTGGATTGCTGTCTTACACATTTTTGAGGAGCACAGGAAAGGAAGATACTGTTGTTCCCATGCTTGATTATGAAAGACAAGGAGCAGATTGGTACAGGATCAGACGATCCTCTCCCAGCGATTGGAACAAAAATTTGGAAACGATACTTGAGTGGTCACCATTTTCTAGAGAAGAAGACTTGGATCACCAGTTCTATCTGATGAAAAACCAAGGCACTCGAGTAATTATTTACAATCTTTGGGAGGATGATGAAGGACAGTTGGAGCTTGATTTTGATGCTGATCCACATGATATTCAAATCAGAGGTGTCAATCGCGATGAAAAGAATATACAAATGGCTAAACAGTTTCCTAATTCTCGTCATTTTTTGACCTACCGGCACTCATTGAGGAGTTATGCAGCAATTCTATATTTGCGGCTACCCATCGACTTCCGAATTATTCTGCGTGGGAAGGATGTTGAGCACCACAACATAGTGAATGATATGATGATGTCCCAAAAAGTCACATATAAGCCACAGCCTAGTACTGCTGATGGGATACCCAAGGATGCAAATATGGCTGCTACTGTCACCATTGGGTTTGTGAAGGATGCAAAACATCATATTGATGTTCAGGGGTTCAATGTCTATCACAAGAATCGACTGATTAAGCCATTTTGGCGGCTTTGGAACGCTGCAGGAAGTGATGGCCGCGGTGTAATAGGTCTGTTAGAAGCCAATTTTGTTGAACCAGCTCATGACAAGCAAGGGTTTGAGCGTACAACAATTCTTTCAAGACTCGAGGCAAAATTAGTGCAAATGCAAAAGACATACTGGTCTACTAATTGTCATAAAATTGGATATGCTGCACGACGTAATAAGAAGGTCAACAATGCTGAAGATAAAGATAAAGAGACTTCCCCTGATTTTCTTTCTGAAAGGGACGGTACCACATCAGGTGTCAAGAGACCACGTTCACTTTCAGATACATTCCGTTCAAAAATGGCTGACAATGGACATGGGAATATACATGTGTCCAGAAAAGGCAAAAGTACAGTGCAAATCCAAACAAAGTTAACCCCAACAAGATCCGGGGAAGAATCAAGCTCTTCTGAAGCATCACTACCTTCGCCAGCCAATGTTAGGGGTGGAAACATGCATAAACAAGTGAATGGCGGTAGGGAATCACTACCTTCACCAGCCAATGTTAGGGGTGGAAATGTGCATAAACAAGTGAATGGCGGTAGGGAATCACTACCTTCGCCAGCCAATGTTAGGGGTGGAAACGTGCATAAACAAGTGAATGGCGGTAGGGAATCACTACCTTCGCCAGCCAATGTTAGGGGTGGAAATGTGCATAAACAAGTGAATGGCGGTAGGGAATCTAGGGACAAGGACATACATGTTGCTGTATGTGATAAGCAAGTGAATGGCAGTTTTCATAAGTCATTTACTGCTATGCATTATTCTGGAAAAGATGGTCCAGCTGTGACTGAATTATCTTCAGATATGGACGATACTGAATCCCAACAAGAGTGTACACCATGCAGAGGAACCAGTTTATCTGCCACAAAATCCAAGTCAAAGGGTAATGATTTTAATTTGGAGGATTTGAGCATTGTGCAGCGATTGAGAAAGGAGAATCATGAACTGAAAGAAAAATTGAAAAAACAGGACGAACAGGCTCCAGCTGAATTGCTTAAGGACTTGATGCTGGAAAGGGAGAAGAACATAACACTTGAAACCAAGCTGAAAGAAGCAGAAAAACAGATCGAGTTCTTGAACAAGGAACAAGACAGTCTAATTGATATATTCACGGATGAGAGGCAGCGACGAGATGATGAAGAGAACAAGTTGAGAAAGAAGCTGCAGGTAGAATCCATTGTGACTTTGTGTTCTGTTTTTTGTCCTACTTGTGATGTTTTCTGCTGCCCTTATTTCGTTTCTGTTTTTGCAGGATGCATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006282 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016020 GO:0016462 GO:0016604 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0031935 GO:0031974 GO:0031981 GO:0032101 GO:0032103 GO:0033043 GO:0033044 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043621 GO:0043900 GO:0043902 GO:0044030 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051052 GO:0051128 GO:0051171 GO:0051252 GO:0060255 GO:0060968 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1902275 GO:1902288 GO:1902290 GO:1903506 GO:2000112 GO:2001020 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c_3

Protein Analysis

908

Amino Acids

101.31

Weight (kDa)

6.83

Isoelectric Point (pI)

53.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c_3	PF13589	157 - 253	2e-16	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c	PF02518	158 - 237	2.3e-06	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Morc6_S5	PF17942	387 - 532	8.2e-60	Morc6 ribosomal protein S5 domain 2-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24970 AT5G50780 AT5G50780 AT5G50780
fragaria_vesca	FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_6g42820
malus_domestica	MD06G1137200.v1.1 MD09G1078200.v1.1 MD14G1151900.v1.1 MD17G1068200.v1.1 MD17G1068600.v1.1
prunus_persica	Prupe.5G147000_v2.0.a1 Prupe.5G147000_v2.0.a1 Prupe.5G147000_v2.0.a1
pyrus_communis	pycom06g12840 pycom14g12650 pycom17g06890
rosa_chinensis	RchiOBHm_Chr2g0158661 RchiOBHm_Chr7g0189451
rosa_laevigata	RLG00000004610 RLG00000021104
rosa_multiflora	Rmu_sc0004188.1_g000012
rosa_roxburghii	Rroxscaffold_2G00091130 Rroxscaffold_3G00265430
rosa_rugosa	Rorug02G0471200 Rorug06G0498000 Rorug06G0498100
rosa_samantha	Rh2AG537000 Rh2BG550200 Rh2CG520700 Rh2DG559800 Rh7AG102800 Rh7BG105500 Rh7CG107300 Rh7DG104900
rosa_wichuraiana	Rw2G044460 Rw7G008890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1594
Acc36I	ACCTGC	1 cut(s)	2620
Acc65I	GGTACC	1 cut(s)	1706
AccB1I	GGYRCC	4 cut(s)	65, 79, 283, 1706
AccB7I	CCANNNNNTGG	1 cut(s)	900
AccI	GTMKAC	1 cut(s)	1598
AccII	CGCG	5 cut(s)	101, 183, 271, 1095, 1473
AclWI	GGATC	7 cut(s)	230, 243, 879, 884, 969, 1055, 1842
AcoI	YGGCCR	1 cut(s)	1468
AcsI	RAATTY	1 cut(s)	910
AcuI	CTGAAG	4 cut(s)	209, 1677, 1893, 2247
AcyI	GRCGYC	3 cut(s)	66, 168, 284
AfaI	GTAC	7 cut(s)	703, 872, 1306, 1540, 1708, 1813, 2299
AfiI	CCNNNNNNNGG	8 cut(s)	303, 309, 900, 1902, 1968, 2034, 2100, 2309
AflII	CTTAAG	1 cut(s)	2459
AflIII	ACRYGT	3 cut(s)	181, 1789, 2161
AhdI	GACNNNNNGTC	2 cut(s)	133, 628
AjiI	CACGTC	2 cut(s)	37, 724
AjuI	GAANNNNNNNTTGG	2 cut(s)	896, 928
AloI	GAACNNNNNNTCC	2 cut(s)	953, 985
Alw21I	GWGCWC	2 cut(s)	812, 1245
Alw26I	GTCTC	3 cut(s)	615, 1667, 1720
AlwI	GGATC	7 cut(s)	230, 243, 879, 884, 969, 1055, 1842
Ama87I	CYCGRG	2 cut(s)	996, 1559
AoxI	GGCC	2 cut(s)	300, 1468
ApeKI	GCWGC	8 cut(s)	1178, 1340, 1454, 1625, 2383, 2587, 2626, 2688
ApoI	RAATTY	1 cut(s)	910
ArsI	GACNNNNNNTTYG	2 cut(s)	2324, 2356
Asp718I	GGTACC	1 cut(s)	1706
AspLEI	GCGC	4 cut(s)	68, 103, 286, 370
AspS9I	GGNCC	3 cut(s)	300, 406, 2240
AsuC2I	CCSGG	3 cut(s)	298, 304, 1852
AsuHPI	GGTGA	5 cut(s)	25, 927, 956, 1342, 1947
AvaI	CYCGRG	2 cut(s)	996, 1559
AvaII	GGWCC	2 cut(s)	406, 2240
BaeI	ACNNNNGTAYC	4 cut(s)	816, 849, 914, 947
BamHI	GGATCC	1 cut(s)	235
BanI	GGYRCC	4 cut(s)	65, 79, 283, 1706
BanII	GRGCYC	1 cut(s)	466
BarI	GAAGNNNNNNTAC	2 cut(s)	1866, 1898
BbsI	GAAGAC	1 cut(s)	960
Bbv12I	GWGCWC	2 cut(s)	812, 1245
BbvI	GCAGC	8 cut(s)	1190, 1327, 1441, 1612, 2395, 2599, 2613, 2675
BccI	CCATC	7 cut(s)	205, 397, 749, 1211, 1307, 1460, 2231
BceAI	ACGGC	1 cut(s)	155
BciVI	GTATCC	1 cut(s)	1311
BcnI	CCSGG	3 cut(s)	298, 304, 1852
BcoDI	GTCTC	3 cut(s)	615, 1667, 1720
BfaI	CTAG	3 cut(s)	945, 1302, 2145
BfmI	CTRYAG	2 cut(s)	1455, 2627
BfoI	RGCGCY	3 cut(s)	69, 287, 371
BfrI	CTTAAG	1 cut(s)	2459
BfuAI	ACCTGC	1 cut(s)	2620
BfuI	GTATCC	1 cut(s)	1311
BglI	GCCNNNNNGGC	2 cut(s)	74, 1438
BmcAI	AGTACT	1 cut(s)	1306
Bme1390I	CCNGG	3 cut(s)	298, 304, 1852
Bme18I	GGWCC	2 cut(s)	406, 2240
BmeRI	GACNNNNNGTC	2 cut(s)	133, 628
BmeT110I	CYCGRG	2 cut(s)	996, 1559
BmgBI	CACGTC	2 cut(s)	37, 724
BmgT120I	GGNCC	3 cut(s)	300, 406, 2240
BmiI	GGNNCC	8 cut(s)	67, 81, 237, 285, 301, 1708, 2314, 2445
BmrFI	CCNGG	3 cut(s)	298, 304, 1852
BmsI	GCATC	7 cut(s)	370, 1045, 1318, 1360, 1886, 2460, 2708
BpiI	GAAGAC	1 cut(s)	960
BpmI	CTGGAG	1 cut(s)	2430
BpuEI	CTTGAG	1 cut(s)	947
BpuMI	CCSGG	3 cut(s)	298, 304, 1852
BsaBI	GATNNNNATC	1 cut(s)	1059
BsaHI	GRCGYC	3 cut(s)	66, 168, 284
BsaI	GGTCTC	1 cut(s)	1720
BsaJI	CCNNGG	7 cut(s)	53, 269, 297, 988, 1323, 1471, 1851
BsaXI	ACNNNNNCTCC	6 cut(s)	125, 155, 248, 278, 347, 377
Bsc4I	CCNNNNNNNGG	8 cut(s)	303, 309, 900, 1902, 1968, 2034, 2100, 2309
Bse118I	RCCGGY	4 cut(s)	226, 280, 286, 1155
Bse1I	ACTGG	5 cut(s)	450, 520, 967, 1598, 2316
Bse8I	GATNNNNATC	1 cut(s)	1059
BseDI	CCNNGG	7 cut(s)	53, 269, 297, 988, 1323, 1471, 1851
BseJI	GATNNNNATC	1 cut(s)	1059
BseLI	CCNNNNNNNGG	8 cut(s)	303, 309, 900, 1902, 1968, 2034, 2100, 2309
BseNI	ACTGG	5 cut(s)	450, 520, 967, 1598, 2316
BseRI	GAGGAG	8 cut(s)	161, 164, 211, 269, 272, 275, 820, 1183
BseXI	GCAGC	8 cut(s)	1190, 1327, 1441, 1612, 2395, 2599, 2613, 2675
BseYI	CCCAGC	2 cut(s)	350, 893
BsgI	GTGCAG	2 cut(s)	1611, 2402
Bsh1236I	CGCG	5 cut(s)	101, 183, 271, 1095, 1473
BshFI	GGCC	2 cut(s)	302, 1470
BshNI	GGYRCC	4 cut(s)	65, 79, 283, 1706
BsiHKAI	GWGCWC	2 cut(s)	812, 1245
BsiHKCI	CYCGRG	2 cut(s)	996, 1559
BsiSI	CCGG	9 cut(s)	86, 227, 251, 281, 287, 297, 303, 1156, 1851
BslFI	GGGAC	4 cut(s)	192, 1258, 1715, 2162
BslI	CCNNNNNNNGG	8 cut(s)	303, 309, 900, 1902, 1968, 2034, 2100, 2309
BsmAI	GTCTC	3 cut(s)	615, 1667, 1720
BsmFI	GGGAC	4 cut(s)	192, 1258, 1715, 2162
BsmI	GAATGC	1 cut(s)	436
BsnI	GGCC	2 cut(s)	302, 1470
Bso31I	GGTCTC	1 cut(s)	1720
BsoBI	CYCGRG	2 cut(s)	996, 1559
Bsp1286I	GDGCHC	3 cut(s)	466, 812, 1245
Bsp1407I	TGTACA	1 cut(s)	2297
Bsp143I	GATC	7 cut(s)	235, 876, 884, 961, 1060, 1847, 2529
Bsp68I	TCGCGA	1 cut(s)	1095
BspANI	GGCC	2 cut(s)	302, 1470
BspFNI	CGCG	5 cut(s)	101, 183, 271, 1095, 1473
BspHI	TCATGA	2 cut(s)	1516, 2404
BspLI	GGNNCC	8 cut(s)	67, 81, 237, 285, 301, 1708, 2314, 2445
BspMAI	CTGCAG	2 cut(s)	1459, 2631
BspMI	ACCTGC	1 cut(s)	2620
BspPI	GGATC	7 cut(s)	230, 243, 879, 884, 969, 1055, 1842
BspQI	GCTCTTC	1 cut(s)	1873
BspT107I	GGYRCC	4 cut(s)	65, 79, 283, 1706
BspTI	CTTAAG	1 cut(s)	2459
BspTNI	GGTCTC	1 cut(s)	1720
BsrFI	RCCGGY	4 cut(s)	226, 280, 286, 1155
BsrGI	TGTACA	1 cut(s)	2297
BsrI	ACTGG	5 cut(s)	450, 520, 967, 1598, 2316
BssAI	RCCGGY	4 cut(s)	226, 280, 286, 1155
BssECI	CCNNGG	7 cut(s)	53, 269, 297, 988, 1323, 1471, 1851
BssMI	GATC	7 cut(s)	235, 876, 884, 961, 1060, 1847, 2529
BssNI	GRCGYC	3 cut(s)	66, 168, 284
BssT1I	CCWWGG	2 cut(s)	988, 1323
Bst4CI	ACNGT	7 cut(s)	829, 1038, 1125, 1348, 1706, 1816, 2558
Bst6I	CTCTTC	4 cut(s)	52, 188, 1873, 2598
BstACI	GRCGYC	3 cut(s)	66, 168, 284
BstAFI	CTTAAG	1 cut(s)	2459
BstAUI	TGTACA	1 cut(s)	2297
BstC8I	GCNNGC	8 cut(s)	185, 282, 288, 335, 397, 1893, 2025, 2091
BstDSI	CCRYGG	2 cut(s)	269, 1471
BstEII	GGTNACC	1 cut(s)	933
BstFNI	CGCG	5 cut(s)	101, 183, 271, 1095, 1473
BstH2I	RGCGCY	3 cut(s)	69, 287, 371
BstHHI	GCGC	4 cut(s)	68, 103, 286, 370
BstKTI	GATC	7 cut(s)	238, 879, 887, 964, 1063, 1850, 2532
BstMAI	GTCTC	3 cut(s)	615, 1667, 1720
BstMBI	GATC	7 cut(s)	235, 876, 884, 961, 1060, 1847, 2529
BstMWI	GCNNNNNNNGC	6 cut(s)	49, 74, 277, 470, 1337, 1438
BstNSI	RCATGY	4 cut(s)	631, 1793, 1918, 2165
BstPI	GGTNACC	1 cut(s)	933
BstSCI	CCNGG	3 cut(s)	296, 302, 1850
BstSFI	CTRYAG	2 cut(s)	1455, 2627
BstUI	CGCG	5 cut(s)	101, 183, 271, 1095, 1473
BstV1I	GCAGC	8 cut(s)	1190, 1327, 1441, 1612, 2395, 2599, 2613, 2675
BstV2I	GAAGAC	1 cut(s)	960
BstX2I	RGATCY	2 cut(s)	235, 1847
BstYI	RGATCY	2 cut(s)	235, 1847
BsuI	GTATCC	1 cut(s)	1311
BsuRI	GGCC	2 cut(s)	302, 1470
BtgI	CCRYGG	2 cut(s)	269, 1471
BtgZI	GCGATG	2 cut(s)	393, 1110
BtrI	CACGTC	2 cut(s)	37, 724
BtsIMutI	CAGTG	2 cut(s)	513, 1821
BtuMI	TCGCGA	1 cut(s)	1095
BveI	ACCTGC	1 cut(s)	2620
Cac8I	GCNNGC	8 cut(s)	185, 282, 288, 335, 397, 1893, 2025, 2091
CciI	TCATGA	2 cut(s)	1516, 2404
CfoI	GCGC	4 cut(s)	68, 103, 286, 370
Cfr10I	RCCGGY	4 cut(s)	226, 280, 286, 1155
Cfr13I	GGNCC	3 cut(s)	300, 406, 2240
Cfr42I	CCGCGG	2 cut(s)	272, 1474
CseI	GACGC	2 cut(s)	176, 189
Csp6I	GTAC	7 cut(s)	702, 871, 1305, 1539, 1707, 1812, 2298
CviQI	GTAC	7 cut(s)	702, 871, 1305, 1539, 1707, 1812, 2298
DinI	GGCGCC	2 cut(s)	67, 285
DpnI	GATC	7 cut(s)	237, 878, 886, 963, 1062, 1849, 2531
DpnII	GATC	7 cut(s)	235, 876, 884, 961, 1060, 1847, 2529
DraI	TTTAAA	1 cut(s)	694
DrdI	GACNNNNNNGTC	1 cut(s)	1594
DriI	GACNNNNNGTC	2 cut(s)	133, 628
DseDI	GACNNNNNNGTC	1 cut(s)	1594
EaeI	YGGCCR	1 cut(s)	1468
Eam1104I	CTCTTC	4 cut(s)	52, 188, 1873, 2598
Eam1105I	GACNNNNNGTC	2 cut(s)	133, 628
EarI	CTCTTC	4 cut(s)	52, 188, 1873, 2598
EciI	GGCGGA	1 cut(s)	73
Eco130I	CCWWGG	2 cut(s)	988, 1323
Eco24I	GRGCYC	1 cut(s)	466
Eco31I	GGTCTC	1 cut(s)	1720
Eco47I	GGWCC	2 cut(s)	406, 2240
Eco57I	CTGAAG	4 cut(s)	209, 1677, 1893, 2247
Eco88I	CYCGRG	2 cut(s)	996, 1559
Eco91I	GGTNACC	1 cut(s)	933
EcoO65I	GGTNACC	1 cut(s)	933
EcoT14I	CCWWGG	2 cut(s)	988, 1323
EcoT22I	ATGCAT	3 cut(s)	1920, 2223, 2723
EcoT38I	GRGCYC	1 cut(s)	466
EgeI	GGCGCC	2 cut(s)	67, 285
EheI	GGCGCC	2 cut(s)	67, 285
ErhI	CCWWGG	2 cut(s)	988, 1323
FaqI	GGGAC	4 cut(s)	192, 1258, 1715, 2162
FauI	CCCGC	1 cut(s)	392
FblI	GTMKAC	1 cut(s)	1598
FriOI	GRGCYC	1 cut(s)	466
FspBI	CTAG	3 cut(s)	945, 1302, 2145
GlaI	GCGC	4 cut(s)	67, 102, 285, 369
GsaI	CCCAGC	2 cut(s)	354, 897
GsuI	CTGGAG	1 cut(s)	2430
HaeII	RGCGCY	3 cut(s)	69, 287, 371
HaeIII	GGCC	2 cut(s)	302, 1470
HapII	CCGG	9 cut(s)	86, 227, 251, 281, 287, 297, 303, 1156, 1851
HgaI	GACGC	2 cut(s)	176, 189
HhaI	GCGC	4 cut(s)	68, 103, 286, 370
Hin1I	GRCGYC	3 cut(s)	66, 168, 284
Hin6I	GCGC	4 cut(s)	66, 101, 284, 368
HinP1I	GCGC	4 cut(s)	66, 101, 284, 368
HincII	GTYRAC	2 cut(s)	1648, 1836
HindII	GTYRAC	2 cut(s)	1648, 1836
HpaI	GTTAAC	1 cut(s)	1836
HpaII	CCGG	9 cut(s)	86, 227, 251, 281, 287, 297, 303, 1156, 1851
HphI	GGTGA	5 cut(s)	25, 927, 956, 1342, 1947
Hpy166II	GTNNAC	6 cut(s)	1599, 1648, 1736, 1836, 2298, 2300
Hpy8I	GTNNAC	6 cut(s)	1599, 1648, 1736, 1836, 2298, 2300
Hpy99I	CGWCG	4 cut(s)	38, 170, 1635, 2595
HpyCH4III	ACNGT	7 cut(s)	829, 1038, 1125, 1348, 1706, 1816, 2558
HpyCH4IV	ACGT	5 cut(s)	36, 723, 1633, 1732, 2046
HpyF10VI	GCNNNNNNNGC	6 cut(s)	49, 74, 277, 470, 1337, 1438
HpySE526I	ACGT	5 cut(s)	36, 723, 1633, 1732, 2046
Hsp92I	GRCGYC	3 cut(s)	66, 168, 284
HspAI	GCGC	4 cut(s)	66, 101, 284, 368
KasI	GGCGCC	2 cut(s)	65, 283
KpnI	GGTACC	1 cut(s)	1710
KroI	GCCGGC	2 cut(s)	280, 286
KroNI	GCCGGC	2 cut(s)	282, 288
KspAI	GTTAAC	1 cut(s)	1836
KspI	CCGCGG	2 cut(s)	272, 1474
Kzo9I	GATC	7 cut(s)	235, 876, 884, 961, 1060, 1847, 2529
LguI	GCTCTTC	1 cut(s)	1873
LmnI	GCTCC	7 cut(s)	22, 470, 481, 807, 860, 1042, 2449
Lsp1109I	GCAGC	8 cut(s)	1190, 1327, 1441, 1612, 2395, 2599, 2613, 2675
LweI	GCATC	7 cut(s)	370, 1045, 1318, 1360, 1886, 2460, 2708
MaeI	CTAG	3 cut(s)	945, 1302, 2145
MaeII	ACGT	5 cut(s)	36, 723, 1633, 1732, 2046
MaeIII	GTNAC	6 cut(s)	119, 933, 1282, 1348, 2248, 2644
MalI	GATC	7 cut(s)	237, 878, 886, 963, 1062, 1849, 2531
MboI	GATC	7 cut(s)	235, 876, 884, 961, 1060, 1847, 2529
MfeI	CAATTG	1 cut(s)	669
MflI	RGATCY	2 cut(s)	235, 1847
MhlI	GDGCHC	3 cut(s)	466, 812, 1245
MluI	ACGCGT	1 cut(s)	181
Mly113I	GGCGCC	2 cut(s)	66, 284
MlyI	GAGTC	6 cut(s)	83, 116, 122, 143, 149, 1551
MmeI	TCCRAC	3 cut(s)	117, 123, 1020
Mph1103I	ATGCAT	3 cut(s)	1920, 2223, 2723
MreI	CGCCGGCG	1 cut(s)	286
MroNI	GCCGGC	2 cut(s)	280, 286
MseI	TTAA	7 cut(s)	324, 531, 693, 1428, 1835, 2358, 2460
MslI	CAYNNNNRTG	2 cut(s)	441, 1386
MspA1I	CMGCKG	4 cut(s)	271, 1473, 2246, 2450
MspCI	CTTAAG	1 cut(s)	2459
MspI	CCGG	9 cut(s)	86, 227, 251, 281, 287, 297, 303, 1156, 1851
MspR9I	CCNGG	3 cut(s)	298, 304, 1852
MunI	CAATTG	1 cut(s)	669
Mva1269I	GAATGC	1 cut(s)	436
MvnI	CGCG	5 cut(s)	101, 183, 271, 1095, 1473
MwoI	GCNNNNNNNGC	6 cut(s)	49, 74, 277, 470, 1337, 1438
NaeI	GCCGGC	2 cut(s)	282, 288
NarI	GGCGCC	2 cut(s)	66, 284
NciI	CCSGG	3 cut(s)	298, 304, 1852
NdeII	GATC	7 cut(s)	235, 876, 884, 961, 1060, 1847, 2529
NgoMIV	GCCGGC	2 cut(s)	280, 286
NlaIV	GGNNCC	8 cut(s)	67, 81, 237, 285, 301, 1708, 2314, 2445
NmeAIII	GCCGAG	1 cut(s)	78
NmuCI	GTSAC	6 cut(s)	119, 933, 1282, 1348, 2248, 2644
NruI	TCGCGA	1 cut(s)	1095
NsiI	ATGCAT	3 cut(s)	1920, 2223, 2723
NspI	RCATGY	4 cut(s)	631, 1793, 1918, 2165
PaeR7I	CTCGAG	2 cut(s)	996, 1559
PagI	TCATGA	2 cut(s)	1516, 2404
PciI	ACATGT	2 cut(s)	1789, 2161
PciSI	GCTCTTC	1 cut(s)	1873
PcsI	WCGNNNNNNNCGW	1 cut(s)	162
PctI	GAATGC	1 cut(s)	436
PdiI	GCCGGC	2 cut(s)	282, 288
PflMI	CCANNNNNTGG	1 cut(s)	900
PleI	GAGTC	6 cut(s)	83, 116, 122, 142, 148, 1551
PluTI	GGCGCC	2 cut(s)	69, 287
PpsI	GAGTC	6 cut(s)	83, 116, 122, 142, 148, 1551
PscI	ACATGT	2 cut(s)	1789, 2161
PspEI	GGTNACC	1 cut(s)	933
PspFI	CCCAGC	2 cut(s)	350, 893
PspN4I	GGNNCC	8 cut(s)	67, 81, 237, 285, 301, 1708, 2314, 2445
PspPI	GGNCC	3 cut(s)	300, 406, 2240
PspXI	VCTCGAGB	2 cut(s)	996, 1559
PstI	CTGCAG	2 cut(s)	1459, 2631
PsuI	RGATCY	2 cut(s)	235, 1847
PvuII	CAGCTG	2 cut(s)	2246, 2450
RruI	TCGCGA	1 cut(s)	1095
RsaI	GTAC	7 cut(s)	703, 872, 1306, 1540, 1708, 1813, 2299
RsaNI	GTAC	7 cut(s)	702, 871, 1305, 1539, 1707, 1812, 2298
RseI	CAYNNNNRTG	2 cut(s)	441, 1386
SacII	CCGCGG	2 cut(s)	272, 1474
SapI	GCTCTTC	1 cut(s)	1873
SaqAI	TTAA	7 cut(s)	324, 531, 693, 1428, 1835, 2358, 2460
Sau3AI	GATC	7 cut(s)	235, 876, 884, 961, 1060, 1847, 2529
Sau96I	GGNCC	3 cut(s)	300, 406, 2240
ScaI	AGTACT	1 cut(s)	1306
SchI	GAGTC	6 cut(s)	83, 116, 122, 143, 149, 1551
ScrFI	CCNGG	3 cut(s)	298, 304, 1852
SduI	GDGCHC	3 cut(s)	466, 812, 1245
SfaNI	GCATC	7 cut(s)	370, 1045, 1318, 1360, 1886, 2460, 2708
SfcI	CTRYAG	2 cut(s)	1455, 2627
SfoI	GGCGCC	2 cut(s)	67, 285
Sfr274I	CTCGAG	2 cut(s)	996, 1559
Sfr303I	CCGCGG	2 cut(s)	272, 1474
SgrAI	CRCCGGYG	1 cut(s)	286
SgrBI	CCGCGG	2 cut(s)	272, 1474
SinI	GGWCC	2 cut(s)	406, 2240
SlaI	CTCGAG	2 cut(s)	996, 1559
SmiMI	CAYNNNNRTG	2 cut(s)	441, 1386
SmlI	CTYRAG	4 cut(s)	926, 996, 1559, 2459
SmoI	CTYRAG	4 cut(s)	926, 996, 1559, 2459
SspDI	GGCGCC	2 cut(s)	65, 283
SspMI	CTAG	3 cut(s)	945, 1302, 2145
StyD4I	CCNGG	3 cut(s)	296, 302, 1850
StyI	CCWWGG	2 cut(s)	988, 1323
TaaI	ACNGT	7 cut(s)	829, 1038, 1125, 1348, 1706, 1816, 2558
TaiI	ACGT	5 cut(s)	39, 726, 1636, 1735, 2049
TaqI	TCGA	5 cut(s)	997, 1206, 1420, 1560, 2532
TatI	WGTACW	3 cut(s)	1304, 1811, 2297
TauI	GCSGC	6 cut(s)	43, 85, 271, 1198, 1444, 1473
Tru1I	TTAA	7 cut(s)	324, 531, 693, 1428, 1835, 2358, 2460
Tru9I	TTAA	7 cut(s)	324, 531, 693, 1428, 1835, 2358, 2460
TscAI	CASTG	2 cut(s)	520, 1821
TseFI	GTSAC	6 cut(s)	119, 933, 1282, 1348, 2248, 2644
TseI	GCWGC	8 cut(s)	1178, 1340, 1454, 1625, 2383, 2587, 2626, 2688
Tsp45I	GTSAC	6 cut(s)	119, 933, 1282, 1348, 2248, 2644
TspDTI	ATGAA	9 cut(s)	410, 617, 864, 995, 1044, 1113, 2189, 2421, 2616
TspGWI	ACGGA	3 cut(s)	576, 1742, 2591
TspRI	CASTG	2 cut(s)	520, 1821
Van91I	CCANNNNNTGG	1 cut(s)	900
Vha464I	CTTAAG	1 cut(s)	2459
VpaK11BI	GGWCC	2 cut(s)	406, 2240
XapI	RAATTY	1 cut(s)	910
XbaI	TCTAGA	1 cut(s)	944
XceI	RCATGY	4 cut(s)	631, 1793, 1918, 2165
XhoI	CTCGAG	2 cut(s)	996, 1559
XmiI	GTMKAC	1 cut(s)	1598
XspI	CTAG	3 cut(s)	945, 1302, 2145
ZrmI	AGTACT	1 cut(s)	1306
Zsp2I	ATGCAT	3 cut(s)	1920, 2223, 2723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.