Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0002310

Physical Location & Seq

Genomic Coordinates Reverse (-)

15644693 .. 15650628

Gene Structure 5936 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g12650.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

ATGGACGCGAGGGTGAAGCAAGAGCTTCTCGAAGCTTCGTTTATTCCAACGCCGAAGCGAACCGGCGTCGGTTGTAAGTTGCCCCCAGATTCGGTAATTTGCCTGAGCACGAGTAGCGACAGCAGCAGCAGCAGCGACTCCGACTCCGACGATTCGGCGGATGGAGGCGGCGGCGCTTCGGGTGGTTTGGCGAAGAAGAGGAAGTTGGACGGGATGGGAGTTGGATTTCCGGTTGGGTTTTTGAGCCCTCTGCCGCCGGAGGAAGTGGAGCGGCTGCCTCCCGGGCCGGAGGCGGCGGTTGCGCGGAGGGAAGAGGGCAGGGTTGTCAGTCGGTCGAACTGTAAGCAGTTTTGGAAGGCTGGGGATTATGAAGGAGCACCTTGTGCCAATTGGGATTCTTCTGCCGGTGGGATAGACCATGTCCGGGTTCACCCTAAGTTTCTGCATTCGAATGCTACGAGCCATAAGTGGGCTCTTGGAGCTTTCGCGGAGCTCTTGGACAATGCATTGGACGAGGTGTGCAGTGGTGCTACATATGTTAATGTAGATATGCTAGAAAATAAGAAAGACAGAAGCAGAATGTTGCTAATTGAAGATAATGGTGGTGGGATGGATCCAGATAAGATGCGACATTGCATGTCATTGGGGTATTCTGCGAAAAGCAAACTTGCAAACACTATTGGACAATATGGAAATGGCTTTAAGACAAGTACCATGAGGCTTGGAGCAGATGTAATTGTGTTCTCTCGTTCTAGTGGAAAAGATGGAAAAAGTGCTACACAGAGCATTGGATTGCTGTCTTACACATTTTTGACAAGCACGGGAAAGGAAGATATTGTAGTTCCCATGCTTGATTATGAGAGAGGACAAGGGACTTGGAACAAGATGTTAAGATCCTCTTCAAGTGATTGGGATAAGAATTTGGAAACAATAGTTCAATGGGCACCATTTTTTGACGAAGAAGACCTGCATCATCAGTTCTATATGATGAAAAACCATGGAACCCGAATAATCATCTACAACCTTTGGGAGGATGATGAAGGACAGCTGGAGCTTGATTTTGAAGCTGATCCACATGATATTCAAATTAGAGGTGTTAATCGAGACGAGAAGAGTATACGAATGGCAAAGGACTACCCCAATTCTCGTTTTTTCTTGACCTACCAGCACTCATTGAGGAGCTATGTATCAATTCTCTATTTGCGGCTTCCTCATAACTTCCGAATTATTCTTCGTGGGAAGGATGTTGAGCACCACAACATAGTCAATGATATGATGTTGTCTCAGCAAGTCACATATCGGCCACAGCCTGGTCTTGATGGGGTTCCAAAGGAATTAAATATGGTTGCTGTTGTCACCATTGGTTTTGTGAAGGATGCAAAACATCATATTGATGTTCAAGGGTTTAATGTATATCACAAGAATCGACTGATTAAGCCATTTTGGAGGCTTTGGAATGCTGCGGGAAGTGACGGCCGTGGTGTTATAGGTCTTTTAGAAGCTAATTTTGTTGAACCAGCTCATGATAAGCAGGGGTTTGAGCGTACAACAGTTCTTCAAAGACTCGAGGGAAAATTAATAGCTATGCAAAAGACTTACTGGAGAAACAATTGTCATAGAATCGGCTATGCTCCACGTAATAAGAATGCATCAGCAGATAAAGAGGGTTCTCCCTATGAAACAAATGGTAAAACATCAGGCAGCAAGAAACCAGTTAAAGGTTCCGGCAAGCTCCATTCCAGAACTTCAAAAGATATTCCTACTTATCATGGGCATGTGAATGTACATATGTCTGATAAAGCCACAAATAGAGTGCATTCCCCCTCAAAATCAGGGGAAGGATCGTCAAGTTCTTCTGAACCATCATCACCTTCGGCAGTCAATGTTACTGATAAACAAGTGAATGGCAGTAGTAGTAAGGCATTTTCTGCTAAGAAAGACTCTGGAAAAGGTGGCCCAGTGACTCGGTTATCTTCACGTATGGACGGTACTCAGCAAGATTATTCACCGCATGCAGGAACCAGTTTACCCACCCGAAGTTCCAAGTCAAGGGGGAATGATGTCAATGGTGATTTAGGCGTTTTGGAGCAATTGAGAAAAGAAAATCGTGAATTGAAAGGAAGGTTGGAGGCGGAAAAGGACAGAGGAGCTTCTGCTGATTTGGAGCAGGAATTGCAGCGTGAAAAGGATAGGTCCAAATCACTTGAAACCCAGCTCCAAACGGCACAAGAAAAAATTGAGGAAATGAACAAAGAACAAGACACTCTAATTGGCATATTCTCCGAGGAAAGGGAGCGACGAGACAATGAAGAGGCCACTTTGAGAAAGAAGCTGGAGGATGCATCCAGTACCATTCAGTTATTGCTTGACAAGGTAAGGAAACTGGAAGCAACGAAGTCCGGGAACCTCAAATCCAATAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006282 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016020 GO:0016462 GO:0016604 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0031935 GO:0031974 GO:0031981 GO:0032101 GO:0032103 GO:0033043 GO:0033044 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043621 GO:0043900 GO:0043902 GO:0044030 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051052 GO:0051128 GO:0051171 GO:0051252 GO:0060255 GO:0060968 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1902275 GO:1902288 GO:1902290 GO:1903506 GO:2000112 GO:2001020 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c_3

Protein Analysis

808

Amino Acids

89.53

Weight (kDa)

8.36

Isoelectric Point (pI)

43.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24970 AT5G50780 AT5G50780 AT5G50780
fragaria_vesca	FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_6g42820
malus_domestica	MD06G1137200.v1.1 MD09G1078200.v1.1 MD14G1151900.v1.1 MD17G1068200.v1.1 MD17G1068600.v1.1
prunus_persica	Prupe.5G147000_v2.0.a1 Prupe.5G147000_v2.0.a1 Prupe.5G147000_v2.0.a1
pyrus_communis	pycom06g12840 pycom14g12650 pycom17g06890
rosa_chinensis	RchiOBHm_Chr2g0158661 RchiOBHm_Chr7g0189451
rosa_laevigata	RLG00000004610 RLG00000021104
rosa_multiflora	Rmu_sc0004188.1_g000012
rosa_roxburghii	Rroxscaffold_2G00091130 Rroxscaffold_3G00265430
rosa_rugosa	Rorug02G0471200 Rorug06G0498000 Rorug06G0498100
rosa_samantha	Rh2AG537000 Rh2BG550200 Rh2CG520700 Rh2DG559800 Rh7AG102800 Rh7BG105500 Rh7CG107300 Rh7DG104900
rosa_wichuraiana	Rw2G044460 Rw7G008890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	975
AccB1I	GGYRCC	1 cut(s)	943
AccB7I	CCANNNNNTGG	1 cut(s)	1310
AccBSI	CCGCTC	1 cut(s)	271
AccI	GTMKAC	1 cut(s)	1117
AccII	CGCG	3 cut(s)	8, 304, 488
AclWI	GGATC	5 cut(s)	608, 621, 888, 1064, 1849
AcoI	YGGCCR	2 cut(s)	1301, 1474
AcsI	RAATTY	1 cut(s)	919
AcyI	GRCGYC	1 cut(s)	66
AdeI	CACNNNGTG	1 cut(s)	383
AfaI	GTAC	5 cut(s)	712, 1546, 1785, 1990, 2350
AfiI	CCNNNNNNNGG	9 cut(s)	91, 424, 469, 1030, 1310, 1718, 2015, 2049, 2289
AjnI	CCWGG	1 cut(s)	1309
AjuI	GAANNNNNNNTTGG	4 cut(s)	188, 220, 2108, 2140
AloI	GAACNNNNNNTCC	1 cut(s)	2396
Alw21I	GWGCWC	4 cut(s)	110, 379, 495, 1254
Alw26I	GTCTC	3 cut(s)	1098, 1287, 2295
AlwI	GGATC	5 cut(s)	608, 621, 888, 1064, 1849
Ama87I	CYCGRG	2 cut(s)	281, 1565
AoxI	GGCC	5 cut(s)	284, 1301, 1474, 1954, 2313
ApeKI	GCWGC	8 cut(s)	123, 126, 129, 132, 274, 1460, 1701, 2176
ApoI	RAATTY	1 cut(s)	919
AseI	ATTAAT	1 cut(s)	1577
AspLEI	GCGC	2 cut(s)	176, 304
AspS9I	GGNCC	3 cut(s)	284, 1955, 2193
AsuC2I	CCSGG	4 cut(s)	282, 283, 425, 2401
AsuHPI	GGTGA	6 cut(s)	25, 422, 1348, 1860, 1998, 2081
AsuII	TTCGAA	1 cut(s)	449
AvaI	CYCGRG	2 cut(s)	281, 1565
AvaII	GGWCC	1 cut(s)	2193
BaeGI	GKGCMC	1 cut(s)	946
BamHI	GGATCC	1 cut(s)	613
BanI	GGYRCC	1 cut(s)	943
BanII	GRGCYC	3 cut(s)	248, 475, 495
BauI	CACGAG	1 cut(s)	109
BbsI	GAAGAC	1 cut(s)	969
Bbv12I	GWGCWC	4 cut(s)	110, 379, 495, 1254
BbvI	GCAGC	8 cut(s)	135, 138, 141, 144, 261, 1447, 1713, 2188
BccI	CCATC	6 cut(s)	155, 208, 604, 758, 1313, 1870
BceAI	ACGGC	3 cut(s)	1461, 1489, 2238
BciT130I	CCWGG	1 cut(s)	1311
BcnI	CCSGG	4 cut(s)	282, 283, 425, 2401
BcoDI	GTCTC	3 cut(s)	1098, 1287, 2295
BfaI	CTAG	2 cut(s)	554, 753
BfoI	RGCGCY	1 cut(s)	177
BfuAI	ACCTGC	1 cut(s)	975
BglI	GCCNNNNNGGC	1 cut(s)	283
Bme1390I	CCNGG	5 cut(s)	282, 283, 425, 1311, 2401
Bme18I	GGWCC	1 cut(s)	2193
BmeT110I	CYCGRG	2 cut(s)	281, 1565
BmgT120I	GGNCC	3 cut(s)	284, 1955, 2193
BmiI	GGNNCC	7 cut(s)	615, 945, 1003, 1326, 1723, 2020, 2405
BmrFI	CCNGG	5 cut(s)	282, 283, 425, 1311, 2401
BmrI	ACTGGG	1 cut(s)	1952
BmsI	GCATC	6 cut(s)	615, 979, 1366, 1658, 2329, 2351
BmuI	ACTGGG	1 cut(s)	1952
BpiI	GAAGAC	1 cut(s)	969
BpmI	CTGGAG	3 cut(s)	1070, 1621, 2354
Bpu10I	CCTNAGC	1 cut(s)	104
Bpu14I	TTCGAA	1 cut(s)	449
BpuMI	CCSGG	4 cut(s)	282, 283, 425, 2401
BsaAI	YACGTR	2 cut(s)	1637, 1979
BsaHI	GRCGYC	1 cut(s)	66
BsaJI	CCNNGG	4 cut(s)	281, 997, 1477, 2283
BsaWI	WCCGGW	1 cut(s)	229
BsaXI	ACNNNNNCTCC	4 cut(s)	128, 158, 717, 747
Bsc4I	CCNNNNNNNGG	9 cut(s)	91, 424, 469, 1030, 1310, 1718, 2015, 2049, 2289
Bse118I	RCCGGY	2 cut(s)	62, 404
Bse1I	ACTGG	6 cut(s)	1604, 1712, 1958, 2022, 2346, 2388
Bse3DI	GCAATG	1 cut(s)	631
BseBI	CCWGG	1 cut(s)	1311
BseDI	CCNNGG	4 cut(s)	281, 997, 1477, 2283
BseGI	GGATG	8 cut(s)	166, 219, 615, 1039, 1249, 1381, 2342, 2344
BseLI	CCNNNNNNNGG	9 cut(s)	91, 424, 469, 1030, 1310, 1718, 2015, 2049, 2289
BseMI	GCAATG	1 cut(s)	631
BseMII	CTCAG	3 cut(s)	95, 1298, 2006
BseNI	ACTGG	6 cut(s)	1604, 1712, 1958, 2022, 2346, 2388
BseRI	GAGGAG	2 cut(s)	1192, 2160
BseSI	GKGCMC	1 cut(s)	946
BseX3I	CGGCCG	1 cut(s)	1474
BseXI	GCAGC	8 cut(s)	135, 138, 141, 144, 261, 1447, 1713, 2188
BseYI	CCCAGC	2 cut(s)	359, 2211
BsgI	GTGCAG	1 cut(s)	541
Bsh1236I	CGCG	3 cut(s)	8, 304, 488
Bsh1285I	CGRYCG	2 cut(s)	335, 1477
BshFI	GGCC	5 cut(s)	286, 1303, 1476, 1956, 2315
BshNI	GGYRCC	1 cut(s)	943
BsiEI	CGRYCG	2 cut(s)	335, 1477
BsiHKAI	GWGCWC	4 cut(s)	110, 379, 495, 1254
BsiHKCI	CYCGRG	2 cut(s)	281, 1565
BsiSI	CCGG	9 cut(s)	63, 230, 257, 282, 287, 405, 424, 1725, 2400
BslFI	GGGAC	1 cut(s)	886
BslI	CCNNNNNNNGG	9 cut(s)	91, 424, 469, 1030, 1310, 1718, 2015, 2049, 2289
BsmAI	GTCTC	3 cut(s)	1098, 1287, 2295
BsmBI	CGTCTC	1 cut(s)	1098
BsmFI	GGGAC	1 cut(s)	886
BsmI	GAATGC	5 cut(s)	445, 457, 1462, 1651, 1816
BsnI	GGCC	5 cut(s)	286, 1303, 1476, 1956, 2315
BsoBI	CYCGRG	2 cut(s)	281, 1565
Bsp119I	TTCGAA	1 cut(s)	449
Bsp1286I	GDGCHC	7 cut(s)	110, 248, 379, 475, 495, 946, 1254
Bsp1407I	TGTACA	1 cut(s)	1783
Bsp143I	GATC	4 cut(s)	613, 893, 1069, 1841
Bsp19I	CCATGG	1 cut(s)	997
BspANI	GGCC	5 cut(s)	286, 1303, 1476, 1956, 2315
BspCNI	CTCAG	3 cut(s)	96, 1297, 2005
BspFNI	CGCG	3 cut(s)	8, 304, 488
BspHI	TCATGA	1 cut(s)	1522
BspLI	GGNNCC	7 cut(s)	615, 945, 1003, 1326, 1723, 2020, 2405
BspMI	ACCTGC	1 cut(s)	975
BspPI	GGATC	5 cut(s)	608, 621, 888, 1064, 1849
BspT104I	TTCGAA	1 cut(s)	449
BspT107I	GGYRCC	1 cut(s)	943
BsrBI	CCGCTC	1 cut(s)	271
BsrDI	GCAATG	1 cut(s)	631
BsrFI	RCCGGY	2 cut(s)	62, 404
BsrGI	TGTACA	1 cut(s)	1783
BsrI	ACTGG	6 cut(s)	1604, 1712, 1958, 2022, 2346, 2388
BssAI	RCCGGY	2 cut(s)	62, 404
BssECI	CCNNGG	4 cut(s)	281, 997, 1477, 2283
BssMI	GATC	4 cut(s)	613, 893, 1069, 1841
BssNAI	GTATAC	1 cut(s)	1118
BssNI	GRCGYC	1 cut(s)	66
BssSI	CACGAG	1 cut(s)	109
BssT1I	CCWWGG	1 cut(s)	997
Bst1107I	GTATAC	1 cut(s)	1118
Bst2BI	CACGAG	1 cut(s)	109
Bst2UI	CCWGG	1 cut(s)	1311
Bst4CI	ACNGT	3 cut(s)	341, 1552, 1988
Bst6I	CTCTTC	5 cut(s)	191, 306, 904, 1106, 2304
BstACI	GRCGYC	1 cut(s)	66
BstAPI	GCANNNNNTGC	3 cut(s)	383, 1928, 2173
BstAUI	TGTACA	1 cut(s)	1783
BstBAI	YACGTR	2 cut(s)	1637, 1979
BstBI	TTCGAA	1 cut(s)	449
BstC8I	GCNNGC	2 cut(s)	1730, 2013
BstDEI	CTNAG	5 cut(s)	104, 435, 1284, 1932, 1992
BstDSI	CCRYGG	2 cut(s)	997, 1477
BstENI	CCTNNNNNAGG	1 cut(s)	1028
BstF5I	GGATG	8 cut(s)	166, 219, 615, 1039, 1249, 1381, 2342, 2344
BstFNI	CGCG	3 cut(s)	8, 304, 488
BstH2I	RGCGCY	1 cut(s)	177
BstHHI	GCGC	2 cut(s)	176, 304
BstKTI	GATC	4 cut(s)	616, 896, 1072, 1844
BstMAI	GTCTC	3 cut(s)	1098, 1287, 2295
BstMBI	GATC	4 cut(s)	613, 893, 1069, 1841
BstMCI	CGRYCG	2 cut(s)	335, 1477
BstNI	CCWGG	1 cut(s)	1311
BstNSI	RCATGY	3 cut(s)	640, 1778, 2015
BstSCI	CCNGG	5 cut(s)	280, 281, 423, 1309, 2399
BstSLI	GKGCMC	1 cut(s)	946
BstUI	CGCG	3 cut(s)	8, 304, 488
BstV1I	GCAGC	8 cut(s)	135, 138, 141, 144, 261, 1447, 1713, 2188
BstV2I	GAAGAC	1 cut(s)	969
BstX2I	RGATCY	2 cut(s)	613, 893
BstYI	RGATCY	2 cut(s)	613, 893
BstZ17I	GTATAC	1 cut(s)	1118
BstZI	CGGCCG	1 cut(s)	1474
BsuRI	GGCC	5 cut(s)	286, 1303, 1476, 1956, 2315
BtgI	CCRYGG	2 cut(s)	997, 1477
BtsCI	GGATG	8 cut(s)	166, 219, 615, 1039, 1249, 1381, 2342, 2344
BtsI	GCAGTG	1 cut(s)	529
BtsIMutI	CAGTG	2 cut(s)	529, 1965
BveI	ACCTGC	1 cut(s)	975
Cac8I	GCNNGC	2 cut(s)	1730, 2013
CciI	TCATGA	1 cut(s)	1522
CfoI	GCGC	2 cut(s)	176, 304
Cfr10I	RCCGGY	2 cut(s)	62, 404
Cfr13I	GGNCC	3 cut(s)	284, 1955, 2193
Cfr9I	CCCGGG	1 cut(s)	281
CseI	GACGC	2 cut(s)	14, 55
Csp6I	GTAC	5 cut(s)	711, 1545, 1784, 1989, 2349
CviQI	GTAC	5 cut(s)	711, 1545, 1784, 1989, 2349
DdeI	CTNAG	5 cut(s)	104, 435, 1284, 1932, 1992
DpnI	GATC	4 cut(s)	615, 895, 1071, 1843
DpnII	GATC	4 cut(s)	613, 893, 1069, 1841
DraIII	CACNNNGTG	1 cut(s)	383
EaeI	YGGCCR	2 cut(s)	1301, 1474
EagI	CGGCCG	1 cut(s)	1474
Eam1104I	CTCTTC	5 cut(s)	191, 306, 904, 1106, 2304
EarI	CTCTTC	5 cut(s)	191, 306, 904, 1106, 2304
EciI	GGCGGA	2 cut(s)	173, 2147
Ecl136II	GAGCTC	1 cut(s)	493
EclXI	CGGCCG	1 cut(s)	1474
Eco130I	CCWWGG	1 cut(s)	997
Eco24I	GRGCYC	3 cut(s)	248, 475, 495
Eco47I	GGWCC	1 cut(s)	2193
Eco52I	CGGCCG	1 cut(s)	1474
Eco53kI	GAGCTC	1 cut(s)	493
Eco88I	CYCGRG	2 cut(s)	281, 1565
EcoICRI	GAGCTC	1 cut(s)	493
EcoNI	CCTNNNNNAGG	1 cut(s)	1028
EcoRII	CCWGG	1 cut(s)	1309
EcoT14I	CCWWGG	1 cut(s)	997
EcoT22I	ATGCAT	3 cut(s)	508, 1651, 2344
EcoT38I	GRGCYC	3 cut(s)	248, 475, 495
ErhI	CCWWGG	1 cut(s)	997
Esp3I	CGTCTC	1 cut(s)	1098
FalI	AAGNNNNNCTT	2 cut(s)	883, 915
FaqI	GGGAC	1 cut(s)	886
FauI	CCCGC	1 cut(s)	1456
FauNDI	CATATG	2 cut(s)	535, 1788
FblI	GTMKAC	1 cut(s)	1117
FokI	GGATG	8 cut(s)	173, 226, 622, 1046, 1256, 1388, 2329, 2351
FriOI	GRGCYC	3 cut(s)	248, 475, 495
FspBI	CTAG	2 cut(s)	554, 753
GlaI	GCGC	2 cut(s)	175, 303
GsaI	CCCAGC	2 cut(s)	363, 2215
GsuI	CTGGAG	3 cut(s)	1070, 1621, 2354
HaeII	RGCGCY	1 cut(s)	177
HaeIII	GGCC	5 cut(s)	286, 1303, 1476, 1956, 2315
HapII	CCGG	9 cut(s)	63, 230, 257, 282, 287, 405, 424, 1725, 2400
HgaI	GACGC	2 cut(s)	14, 55
HhaI	GCGC	2 cut(s)	176, 304
Hin1I	GRCGYC	1 cut(s)	66
Hin6I	GCGC	2 cut(s)	174, 302
HinP1I	GCGC	2 cut(s)	174, 302
HindIII	AAGCTT	1 cut(s)	33
HpaII	CCGG	9 cut(s)	63, 230, 257, 282, 287, 405, 424, 1725, 2400
HphI	GGTGA	6 cut(s)	25, 422, 1348, 1860, 1998, 2081
Hpy166II	GTNNAC	3 cut(s)	430, 1118, 2027
Hpy188I	TCNGA	6 cut(s)	142, 148, 1223, 1795, 1858, 2284
Hpy188III	TCNNGA	9 cut(s)	29, 617, 1103, 1156, 1316, 1523, 1740, 1944, 2108
Hpy8I	GTNNAC	3 cut(s)	430, 1118, 2027
Hpy99I	CGWCG	3 cut(s)	71, 152, 2301
HpyAV	CCTTC	8 cut(s)	349, 365, 1034, 1234, 1366, 1832, 1881, 2115
HpyCH4III	ACNGT	3 cut(s)	341, 1552, 1988
HpyCH4IV	ACGT	2 cut(s)	1636, 1978
HpyF3I	CTNAG	5 cut(s)	104, 435, 1284, 1932, 1992
HpySE526I	ACGT	2 cut(s)	1636, 1978
Hsp92I	GRCGYC	1 cut(s)	66
HspAI	GCGC	2 cut(s)	174, 302
Kzo9I	GATC	4 cut(s)	613, 893, 1069, 1841
Lsp1109I	GCAGC	8 cut(s)	135, 138, 141, 144, 261, 1447, 1713, 2188
LweI	GCATC	6 cut(s)	615, 979, 1366, 1658, 2329, 2351
MaeI	CTAG	2 cut(s)	554, 753
MaeII	ACGT	2 cut(s)	1636, 1978
MaeIII	GTNAC	5 cut(s)	1291, 1354, 1469, 1885, 1960
MalI	GATC	4 cut(s)	615, 895, 1071, 1843
MbiI	CCGCTC	1 cut(s)	271
MboI	GATC	4 cut(s)	613, 893, 1069, 1841
MfeI	CAATTG	3 cut(s)	388, 1609, 2090
MflI	RGATCY	2 cut(s)	613, 893
MhlI	GDGCHC	7 cut(s)	110, 248, 379, 475, 495, 946, 1254
MlyI	GAGTC	5 cut(s)	131, 137, 1557, 1934, 1957
MmeI	TCCRAC	6 cut(s)	71, 165, 171, 186, 202, 2106
Mph1103I	ATGCAT	3 cut(s)	508, 1651, 2344
MseI	TTAA	9 cut(s)	540, 702, 890, 1098, 1337, 1407, 1434, 1577, 1716
MslI	CAYNNNNRTG	4 cut(s)	450, 1392, 1773, 1779
MspA1I	CMGCKG	1 cut(s)	1048
MspI	CCGG	9 cut(s)	63, 230, 257, 282, 287, 405, 424, 1725, 2400
MspR9I	CCNGG	5 cut(s)	282, 283, 425, 1311, 2401
MunI	CAATTG	3 cut(s)	388, 1609, 2090
Mva1269I	GAATGC	5 cut(s)	445, 457, 1462, 1651, 1816
MvaI	CCWGG	1 cut(s)	1311
MvnI	CGCG	3 cut(s)	8, 304, 488
NciI	CCSGG	4 cut(s)	282, 283, 425, 2401
NcoI	CCATGG	1 cut(s)	997
NdeI	CATATG	2 cut(s)	535, 1788
NdeII	GATC	4 cut(s)	613, 893, 1069, 1841
NlaIV	GGNNCC	7 cut(s)	615, 945, 1003, 1326, 1723, 2020, 2405
NmuCI	GTSAC	4 cut(s)	1291, 1354, 1469, 1960
NsiI	ATGCAT	3 cut(s)	508, 1651, 2344
NspI	RCATGY	3 cut(s)	640, 1778, 2015
NspV	TTCGAA	1 cut(s)	449
PaeI	GCATGC	1 cut(s)	2015
PaeR7I	CTCGAG	1 cut(s)	1565
PagI	TCATGA	1 cut(s)	1522
PcsI	WCGNNNNNNNCGW	1 cut(s)	455
PctI	GAATGC	5 cut(s)	445, 457, 1462, 1651, 1816
PfeI	GAWTC	5 cut(s)	89, 152, 395, 1423, 1620
PflFI	GACNNNGTC	1 cut(s)	419
PflMI	CCANNNNNTGG	1 cut(s)	1310
PfoI	TCCNGGA	1 cut(s)	2399
PleI	GAGTC	5 cut(s)	131, 137, 1557, 1934, 1957
PpsI	GAGTC	5 cut(s)	131, 137, 1557, 1934, 1957
Ppu21I	YACGTR	2 cut(s)	1637, 1979
PshBI	ATTAAT	1 cut(s)	1577
Psp124BI	GAGCTC	1 cut(s)	495
Psp6I	CCWGG	1 cut(s)	1309
PspFI	CCCAGC	2 cut(s)	359, 2211
PspGI	CCWGG	1 cut(s)	1309
PspN4I	GGNNCC	7 cut(s)	615, 945, 1003, 1326, 1723, 2020, 2405
PspPI	GGNCC	3 cut(s)	284, 1955, 2193
PspXI	VCTCGAGB	1 cut(s)	1565
PsuI	RGATCY	2 cut(s)	613, 893
PsyI	GACNNNGTC	1 cut(s)	419
PvuII	CAGCTG	1 cut(s)	1048
RsaI	GTAC	5 cut(s)	712, 1546, 1785, 1990, 2350
RsaNI	GTAC	5 cut(s)	711, 1545, 1784, 1989, 2349
RseI	CAYNNNNRTG	4 cut(s)	450, 1392, 1773, 1779
SacI	GAGCTC	1 cut(s)	495
SaqAI	TTAA	9 cut(s)	540, 702, 890, 1098, 1337, 1407, 1434, 1577, 1716
Sau3AI	GATC	4 cut(s)	613, 893, 1069, 1841
Sau96I	GGNCC	3 cut(s)	284, 1955, 2193
SchI	GAGTC	5 cut(s)	131, 137, 1557, 1934, 1957
ScrFI	CCNGG	5 cut(s)	282, 283, 425, 1311, 2401
SduI	GDGCHC	7 cut(s)	110, 248, 379, 475, 495, 946, 1254
SfaNI	GCATC	6 cut(s)	615, 979, 1366, 1658, 2329, 2351
Sfr274I	CTCGAG	1 cut(s)	1565
SfuI	TTCGAA	1 cut(s)	449
SinI	GGWCC	1 cut(s)	2193
SlaI	CTCGAG	1 cut(s)	1565
SmaI	CCCGGG	1 cut(s)	283
SmiMI	CAYNNNNRTG	4 cut(s)	450, 1392, 1773, 1779
SmlI	CTYRAG	1 cut(s)	1565
SmoI	CTYRAG	1 cut(s)	1565
SphI	GCATGC	1 cut(s)	2015
SspMI	CTAG	2 cut(s)	554, 753
SstI	GAGCTC	1 cut(s)	495
StyD4I	CCNGG	5 cut(s)	280, 281, 423, 1309, 2399
StyI	CCWWGG	1 cut(s)	997
TaaI	ACNGT	3 cut(s)	341, 1552, 1988
TaiI	ACGT	2 cut(s)	1639, 1981
TaqI	TCGA	6 cut(s)	30, 335, 449, 1102, 1426, 1566
TaqII	GACCGA	1 cut(s)	321
TatI	WGTACW	1 cut(s)	1783
TauI	GCSGC	6 cut(s)	171, 174, 256, 274, 296, 1207
TfiI	GAWTC	5 cut(s)	89, 152, 395, 1423, 1620
Tru1I	TTAA	9 cut(s)	540, 702, 890, 1098, 1337, 1407, 1434, 1577, 1716
Tru9I	TTAA	9 cut(s)	540, 702, 890, 1098, 1337, 1407, 1434, 1577, 1716
TscAI	CASTG	2 cut(s)	529, 1965
TseFI	GTSAC	4 cut(s)	1291, 1354, 1469, 1960
TseI	GCWGC	8 cut(s)	123, 126, 129, 132, 274, 1460, 1701, 2176
Tsp45I	GTSAC	4 cut(s)	1291, 1354, 1469, 1960
TspDTI	ATGAA	6 cut(s)	384, 1004, 1053, 1692, 2261, 2322
TspMI	CCCGGG	1 cut(s)	281
TspRI	CASTG	2 cut(s)	529, 1965
Tth111I	GACNNNGTC	1 cut(s)	419
Van91I	CCANNNNNTGG	1 cut(s)	1310
VpaK11BI	GGWCC	1 cut(s)	2193
VspI	ATTAAT	1 cut(s)	1577
XagI	CCTNNNNNAGG	1 cut(s)	1028
XapI	RAATTY	1 cut(s)	919
XceI	RCATGY	3 cut(s)	640, 1778, 2015
XhoI	CTCGAG	1 cut(s)	1565
XmaI	CCCGGG	1 cut(s)	281
XmiI	GTMKAC	1 cut(s)	1117
XspI	CTAG	2 cut(s)	554, 753
Zsp2I	ATGCAT	3 cut(s)	508, 1651, 2344

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.