Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0002310

Physical Location & Seq

Genomic Coordinates Reverse (-)

5523719 .. 5525905

Gene Structure 2187 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1068200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2187 bp

ATGTCACAAGAAGGTGAAGTTTTGGGAGGTTCGGTGAAGAAGCGGAAGCTGGACGGGGTGGGATCTTCCGAGGTTCTGAGTCCTCAGCCGCTGCGGCAGGTGAGAGCCCATCAGAGCTGTAAGCAGTTTTGGAAGGCTGGGGATTATGAAGGAGCTCCTTGCAGCGATAATCATACTTCTGCTGCTGGTGGGATGGACCGTGTAAGGGTTCATCCCAGATTTCTGCATTCCAATGCAACAAGTCACAAGTGGGCTCTCGGCGCTTTTGCCGAGCTGTTAGACAATGCATTGGATGAGGTTTGCAGTGGTGCTACGTACGTTAATGTCGATGTGCTTGAAAGCAAGAAAGATGGAAGCAGAATGTTGCTGATCCAAGATGATGGCGGTGGTATGGATCCGAAAAAGATGCGACACTGCATGTCCTTGGGGTATTCGGTGAAAAGCAAAGTTGCTAACACTATCGGACAGTATGGAAACGGTTTTAAGACGAGTACTATGAGGCTAGGAGCAGATGTGATCGTGTTTTCGCGCTGCGAAGGAAAAGATGGAAAAAGCGATACGCGGAGCATCGGGTTGCTGTCTTACACGTTCTTGAAGAGCACGGGAAAGGAAGACATTGTAGTTCCCATGCTTGATTACGAGAAGAGAGGAGGAGGAGCCTGGCGCAAAATGTTTCAATCCTCCGAAAGTTCTGAAAGTGATTGGAAGAAAAATGTGGAGACAATAGTTCAGTGGTCGCCATTTTCTAGCGAAGAAGAGCTGCATCGTCAGTTCTTAATGATTAAAAACCATGGCACCCAAATAATCATATACAACCTTTGGGAGGACGACGAAGATCAGTTGGAGCTTGATTTTGACACCGACCCTCATGATATTCAACTCAAAGGTGTCAATCGAGACGAGAAGAATATACAAATGGCTCAAGATTATTCCAACTCGCGGGTTTTCTTGACCTACCAGCACTCGTTGAGGAGCTATGCATCGATTCTCTATTTGCGGCTTCCTCCTAACTTTCGGATCATCCTTCGCGGGAAAGAAGTTGAGCACCACAACATAGTGAATGATATGATGATGTCCCAGCAAGTCACGTATCGGCCAACCGGTGCTGACGGGATCCAAACAAACGCAAATGCGATTGCTGTTGTCACCATCGGGTTTGTAAAGGATGCAAAATCTCATATCGACGTCCAGGGGTTCAATGTTTATCACAAGAATCGATTGATTAAGCCGTTTTGGAGGCTTTGGAATGCTGCAGGAAGTGACGGCAGGGGTGTTATGGGTGTTTTAGAAGCTAATTTTGTTGAACCAGCTCATGATAAGCAGGGGTTTGAGCGTACAACAGTTCTTTCGAGACTCGAGAAACGATTGTTAATTATGCAGAAGAATTACTGGAGTACTAACTGCCACGAAATTGGGTATGCTCCGCGACGTAATAAGAAGATCATTAACGACTCTGCAAATCGTAAAGAAACTAGTCCCAATCCTCCATCTAACGCGGAGGCTACTACGTCAGGCAGCAAGAAGAGACCATTTTCGGGTCGTGATTCACCCGCACTTCAGAGTGTTGGTTCAAAAGCTTCCGAAAGGATCACCAACGATGGAGTCCAAACCCCCAAGCAATCTGGGACATTAGGATCATCAAGGTCTTATGAACCATCGGCACCACCTTCGGCAGCCAATGTTAGCGATGCAGGCATGCATGTTACCATGTCTGATAAGCAAGTGGGTGGCAGACATCATGAGGGATTTGCTGCTAAAGAAGACTCTGCGAAAGACCGCCCACGTGTTGCAACTCCGTTATCTTCACATACGGAAGATACTGAACAATCTTGTTCACCAAGTAGCCCAGGAGCCAATTCACTGGACGGTCATGATGTCAATGGTGGGCGTTCCCGCTTGGAGCCTGTTCGAGTTGTAGGGGTGCAGCAATTGAAAATAGCATATATCAAACTCAAGAAAATTTTGGAGAAAAAGGATCAATGGTGCAAGTCACTTGAAACTCAGCTCCTAGCGTCAAAACAAAAAATTACAGACATGAACAATGAACAAGATAACCTAATTGGCATATTCTCCGAGGAGAGGGAGCGTCGAGACAAGGAGGAGAAGAGTTTGAGAGAGAAGCTGAAGGATGCAACATATACCATTCAACAATTGGAAAAGCAACTCGAAGCAATCAAGTCCGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006282 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016020 GO:0016462 GO:0016604 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0031935 GO:0031974 GO:0031981 GO:0032101 GO:0032103 GO:0033043 GO:0033044 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043621 GO:0043900 GO:0043902 GO:0044030 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051052 GO:0051128 GO:0051171 GO:0051252 GO:0060255 GO:0060968 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:1902275 GO:1902288 GO:1902290 GO:1903506 GO:2000112 GO:2001020 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c_3

Protein Analysis

729

Amino Acids

81.25

Weight (kDa)

8.68

Isoelectric Point (pI)

47.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c_3	PF13589	87 - 206	2.1e-16	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Morc6_S5	PF17942	321 - 464	2.4e-60	Morc6 ribosomal protein S5 domain 2-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24970 AT5G50780 AT5G50780 AT5G50780
fragaria_vesca	FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_5g08810 FvH4_6g42820
malus_domestica	MD06G1137200.v1.1 MD09G1078200.v1.1 MD14G1151900.v1.1 MD17G1068200.v1.1 MD17G1068600.v1.1
prunus_persica	Prupe.5G147000_v2.0.a1 Prupe.5G147000_v2.0.a1 Prupe.5G147000_v2.0.a1
pyrus_communis	pycom06g12840 pycom14g12650 pycom17g06890
rosa_chinensis	RchiOBHm_Chr2g0158661 RchiOBHm_Chr7g0189451
rosa_laevigata	RLG00000004610 RLG00000021104
rosa_multiflora	Rmu_sc0004188.1_g000012
rosa_roxburghii	Rroxscaffold_2G00091130 Rroxscaffold_3G00265430
rosa_rugosa	Rorug02G0471200 Rorug06G0498000 Rorug06G0498100
rosa_samantha	Rh2AG537000 Rh2BG550200 Rh2CG520700 Rh2DG559800 Rh7AG102800 Rh7BG105500 Rh7CG107300 Rh7DG104900
rosa_wichuraiana	Rw2G044460 Rw7G008890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	88
AatII	GACGTC	1 cut(s)	1188
Acc36I	ACCTGC	1 cut(s)	88
AccB1I	GGYRCC	2 cut(s)	794, 1660
AccII	CGCG	6 cut(s)	529, 562, 940, 1029, 1426, 1496
AcoI	YGGCCR	1 cut(s)	1094
AcsI	RAATTY	1 cut(s)	1959
AcuI	CTGAAG	2 cut(s)	1541, 2144
AcvI	CACGTG	1 cut(s)	1784
AcyI	GRCGYC	1 cut(s)	1185
AfaI	GTAC	4 cut(s)	317, 493, 1336, 1396
AfiI	CCNNNNNNNGG	5 cut(s)	205, 823, 939, 1535, 2079
AflIII	ACRYGT	2 cut(s)	585, 1783
AgeI	ACCGGT	1 cut(s)	1100
AhlI	ACTAGT	1 cut(s)	1472
AjnI	CCWGG	3 cut(s)	659, 1188, 1846
Alw21I	GWGCWC	3 cut(s)	157, 602, 1047
Alw26I	GTCTC	5 cut(s)	713, 891, 1345, 1519, 2085
AlwNI	CAGNNNCTG	1 cut(s)	91
Ama87I	CYCGRG	1 cut(s)	1355
AoxI	GGCC	1 cut(s)	1094
ApoI	RAATTY	1 cut(s)	1959
AsiGI	ACCGGT	1 cut(s)	1100
AspLEI	GCGC	3 cut(s)	263, 531, 666
AspS9I	GGNCC	1 cut(s)	196
AsuHPI	GGTGA	8 cut(s)	26, 46, 112, 448, 1138, 1539, 1582, 1827
AvaI	CYCGRG	1 cut(s)	1355
AvaII	GGWCC	1 cut(s)	196
BamHI	GGATCC	2 cut(s)	394, 1113
BanI	GGYRCC	2 cut(s)	794, 1660
BanII	GRGCYC	3 cut(s)	109, 157, 256
BbrPI	CACGTG	1 cut(s)	1784
BbsI	GAAGAC	2 cut(s)	618, 1767
Bbv12I	GWGCWC	3 cut(s)	157, 602, 1047
BbvCI	CCTCAGC	1 cut(s)	84
BccI	CCATC	9 cut(s)	117, 187, 344, 374, 539, 1157, 1495, 1592, 1663
BceAI	ACGGC	2 cut(s)	1213, 1279
BcgI	CGANNNNNNTGC	4 cut(s)	388, 422, 1650, 1684
BciT130I	CCWGG	3 cut(s)	661, 1190, 1848
BcoDI	GTCTC	5 cut(s)	713, 891, 1345, 1519, 2085
BcuI	ACTAGT	1 cut(s)	1472
BfaI	CTAG	4 cut(s)	503, 747, 1473, 2009
BfmI	CTRYAG	1 cut(s)	1251
BfoI	RGCGCY	1 cut(s)	264
BfuAI	ACCTGC	1 cut(s)	88
BglI	GCCNNNNNGGC	1 cut(s)	94
BmcAI	AGTACT	2 cut(s)	493, 1396
Bme1390I	CCNGG	3 cut(s)	661, 1190, 1848
Bme18I	GGWCC	1 cut(s)	196
BmeT110I	CYCGRG	1 cut(s)	1355
BmgT120I	GGNCC	1 cut(s)	196
BmiI	GGNNCC	7 cut(s)	396, 658, 796, 1115, 1662, 1852, 1902
BmrFI	CCNGG	3 cut(s)	661, 1190, 1848
BmsI	GCATC	7 cut(s)	396, 576, 772, 989, 1156, 1678, 2119
BpiI	GAAGAC	2 cut(s)	618, 1767
BpmI	CTGGAG	1 cut(s)	1411
Bpu10I	CCTNAGC	1 cut(s)	84
BpuEI	CTTGAG	2 cut(s)	906, 1937
Bsa29I	ATCGAT	2 cut(s)	983, 1216
BsaAI	YACGTR	3 cut(s)	315, 1089, 1784
BsaHI	GRCGYC	1 cut(s)	1185
BsaI	GGTCTC	1 cut(s)	1519
BsaJI	CCNNGG	6 cut(s)	69, 423, 790, 1189, 1846, 2073
BsaWI	WCCGGW	1 cut(s)	1100
BsaXI	ACNNNNNCTCC	4 cut(s)	18, 48, 498, 528
Bsc4I	CCNNNNNNNGG	5 cut(s)	205, 823, 939, 1535, 2079
Bse118I	RCCGGY	1 cut(s)	1100
Bse1I	ACTGG	2 cut(s)	1394, 1866
BseBI	CCWGG	3 cut(s)	661, 1190, 1848
BseCI	ATCGAT	2 cut(s)	983, 1216
BseDI	CCNNGG	6 cut(s)	69, 423, 790, 1189, 1846, 2073
BseGI	GGATG	6 cut(s)	198, 211, 298, 1020, 1171, 2134
BseLI	CCNNNNNNNGG	5 cut(s)	205, 823, 939, 1535, 2079
BseMII	CTCAG	3 cut(s)	68, 98, 2015
BseNI	ACTGG	2 cut(s)	1394, 1866
BseRI	GAGGAG	6 cut(s)	663, 666, 669, 985, 2090, 2114
BseYI	CCCAGC	2 cut(s)	137, 1077
BsgI	GTGCAG	1 cut(s)	1943
Bsh1236I	CGCG	6 cut(s)	529, 562, 940, 1029, 1426, 1496
BshFI	GGCC	1 cut(s)	1096
BshNI	GGYRCC	2 cut(s)	794, 1660
BshTI	ACCGGT	1 cut(s)	1100
BshVI	ATCGAT	2 cut(s)	983, 1216
BsiHKAI	GWGCWC	3 cut(s)	157, 602, 1047
BsiHKCI	CYCGRG	1 cut(s)	1355
BsiSI	CCGG	1 cut(s)	1101
BsiWI	CGTACG	1 cut(s)	315
BslFI	GGGAC	3 cut(s)	1060, 1461, 1639
BslI	CCNNNNNNNGG	5 cut(s)	205, 823, 939, 1535, 2079
BsmAI	GTCTC	5 cut(s)	713, 891, 1345, 1519, 2085
BsmBI	CGTCTC	1 cut(s)	891
BsmFI	GGGAC	3 cut(s)	1060, 1461, 1639
BsmI	GAATGC	2 cut(s)	226, 1252
BsnI	GGCC	1 cut(s)	1096
Bso31I	GGTCTC	1 cut(s)	1519
BsoBI	CYCGRG	1 cut(s)	1355
Bsp1286I	GDGCHC	5 cut(s)	109, 157, 256, 602, 1047
Bsp19I	CCATGG	1 cut(s)	790
BspANI	GGCC	1 cut(s)	1096
BspCNI	CTCAG	3 cut(s)	69, 97, 2014
BspDI	ATCGAT	2 cut(s)	983, 1216
BspFNI	CGCG	6 cut(s)	529, 562, 940, 1029, 1426, 1496
BspHI	TCATGA	4 cut(s)	868, 1312, 1738, 1870
BspLI	GGNNCC	7 cut(s)	396, 658, 796, 1115, 1662, 1852, 1902
BspMAI	CTGCAG	1 cut(s)	1255
BspMI	ACCTGC	1 cut(s)	88
BspQI	GCTCTTC	2 cut(s)	590, 750
BspT107I	GGYRCC	2 cut(s)	794, 1660
BspTNI	GGTCTC	1 cut(s)	1519
BsrFI	RCCGGY	1 cut(s)	1100
BsrI	ACTGG	2 cut(s)	1394, 1866
BssAI	RCCGGY	1 cut(s)	1100
BssECI	CCNNGG	6 cut(s)	69, 423, 790, 1189, 1846, 2073
BssNI	GRCGYC	1 cut(s)	1185
BssT1I	CCWWGG	2 cut(s)	423, 790
Bst2UI	CCWGG	3 cut(s)	661, 1190, 1848
Bst4CI	ACNGT	5 cut(s)	200, 468, 479, 1342, 1868
Bst6I	CTCTTC	5 cut(s)	590, 638, 750, 1517, 2099
BstACI	GRCGYC	1 cut(s)	1185
BstBAI	YACGTR	3 cut(s)	315, 1089, 1784
BstC8I	GCNNGC	2 cut(s)	1693, 1697
BstDEI	CTNAG	3 cut(s)	77, 84, 2001
BstDSI	CCRYGG	1 cut(s)	790
BstENI	CCTNNNNNAGG	1 cut(s)	821
BstF5I	GGATG	6 cut(s)	198, 211, 298, 1020, 1171, 2134
BstFNI	CGCG	6 cut(s)	529, 562, 940, 1029, 1426, 1496
BstH2I	RGCGCY	1 cut(s)	264
BstHHI	GCGC	3 cut(s)	263, 531, 666
BstMAI	GTCTC	5 cut(s)	713, 891, 1345, 1519, 2085
BstMWI	GCNNNNNNNGC	3 cut(s)	94, 260, 1692
BstNI	CCWGG	3 cut(s)	661, 1190, 1848
BstNSI	RCATGY	3 cut(s)	421, 1699, 1703
BstSCI	CCNGG	3 cut(s)	659, 1188, 1846
BstSFI	CTRYAG	1 cut(s)	1251
BstSNI	TACGTA	1 cut(s)	315
BstUI	CGCG	6 cut(s)	529, 562, 940, 1029, 1426, 1496
BstV2I	GAAGAC	2 cut(s)	618, 1767
BstX2I	RGATCY	3 cut(s)	62, 394, 1113
BstXI	CCANNNNNNTGG	3 cut(s)	380, 1412, 1861
BstYI	RGATCY	3 cut(s)	62, 394, 1113
Bsu15I	ATCGAT	2 cut(s)	983, 1216
BsuRI	GGCC	1 cut(s)	1096
BsuTUI	ATCGAT	2 cut(s)	983, 1216
BtgI	CCRYGG	1 cut(s)	790
BtgZI	GCGATG	1 cut(s)	1701
BtsCI	GGATG	6 cut(s)	198, 211, 298, 1020, 1171, 2134
BtsI	GCAGTG	2 cut(s)	310, 412
BtsIMutI	CAGTG	4 cut(s)	310, 412, 737, 1859
BveI	ACCTGC	1 cut(s)	88
Cac8I	GCNNGC	2 cut(s)	1693, 1697
CaiI	CAGNNNCTG	1 cut(s)	91
CciI	TCATGA	4 cut(s)	868, 1312, 1738, 1870
CfoI	GCGC	3 cut(s)	263, 531, 666
Cfr10I	RCCGGY	1 cut(s)	1100
Cfr13I	GGNCC	1 cut(s)	196
ClaI	ATCGAT	2 cut(s)	983, 1216
CseI	GACGC	2 cut(s)	2001, 2075
Csp6I	GTAC	4 cut(s)	316, 492, 1335, 1395
CspAI	ACCGGT	1 cut(s)	1100
CviQI	GTAC	4 cut(s)	316, 492, 1335, 1395
DdeI	CTNAG	3 cut(s)	77, 84, 2001
EaeI	YGGCCR	1 cut(s)	1094
Eam1104I	CTCTTC	5 cut(s)	590, 638, 750, 1517, 2099
EarI	CTCTTC	5 cut(s)	590, 638, 750, 1517, 2099
EciI	GGCGGA	1 cut(s)	2170
Ecl136II	GAGCTC	1 cut(s)	155
Eco105I	TACGTA	1 cut(s)	315
Eco130I	CCWWGG	2 cut(s)	423, 790
Eco24I	GRGCYC	3 cut(s)	109, 157, 256
Eco31I	GGTCTC	1 cut(s)	1519
Eco47I	GGWCC	1 cut(s)	196
Eco53kI	GAGCTC	1 cut(s)	155
Eco57I	CTGAAG	2 cut(s)	1541, 2144
Eco72I	CACGTG	1 cut(s)	1784
Eco88I	CYCGRG	1 cut(s)	1355
EcoICRI	GAGCTC	1 cut(s)	155
EcoNI	CCTNNNNNAGG	1 cut(s)	821
EcoRII	CCWGG	3 cut(s)	659, 1188, 1846
EcoT14I	CCWWGG	2 cut(s)	423, 790
EcoT22I	ATGCAT	3 cut(s)	289, 982, 1701
EcoT38I	GRGCYC	3 cut(s)	109, 157, 256
ErhI	CCWWGG	2 cut(s)	423, 790
Esp3I	CGTCTC	1 cut(s)	891
FaqI	GGGAC	3 cut(s)	1060, 1461, 1639
FauI	CCCGC	4 cut(s)	933, 1022, 1558, 1901
FokI	GGATG	6 cut(s)	198, 205, 305, 1007, 1178, 2141
FriOI	GRGCYC	3 cut(s)	109, 157, 256
FspBI	CTAG	4 cut(s)	503, 747, 1473, 2009
GlaI	GCGC	3 cut(s)	262, 530, 665
GsaI	CCCAGC	2 cut(s)	141, 1081
GsuI	CTGGAG	1 cut(s)	1411
HaeII	RGCGCY	1 cut(s)	264
HaeIII	GGCC	1 cut(s)	1096
HapII	CCGG	1 cut(s)	1101
HgaI	GACGC	2 cut(s)	2001, 2075
HhaI	GCGC	3 cut(s)	263, 531, 666
Hin1I	GRCGYC	1 cut(s)	1185
Hin6I	GCGC	3 cut(s)	261, 529, 664
HinP1I	GCGC	3 cut(s)	261, 529, 664
HindIII	AAGCTT	1 cut(s)	1575
HinfI	GANTC	8 cut(s)	79, 985, 1213, 1353, 1451, 1544, 1602, 1763
HpaII	CCGG	1 cut(s)	1101
HphI	GGTGA	8 cut(s)	26, 46, 112, 448, 1138, 1539, 1582, 1827
Hpy166II	GTNNAC	1 cut(s)	1835
Hpy8I	GTNNAC	1 cut(s)	1835
Hpy99I	CGWCG	4 cut(s)	833, 1187, 1431, 2091
HpyAV	CCTTC	7 cut(s)	5, 127, 143, 530, 1034, 1677, 2119
HpyCH4III	ACNGT	5 cut(s)	200, 468, 479, 1342, 1868
HpyCH4IV	ACGT	8 cut(s)	314, 318, 587, 1088, 1185, 1429, 1508, 1783
HpyF10VI	GCNNNNNNNGC	3 cut(s)	94, 260, 1692
HpyF3I	CTNAG	3 cut(s)	77, 84, 2001
HpySE526I	ACGT	8 cut(s)	314, 318, 587, 1088, 1185, 1429, 1508, 1783
Hsp92I	GRCGYC	1 cut(s)	1185
HspAI	GCGC	3 cut(s)	261, 529, 664
LguI	GCTCTTC	2 cut(s)	590, 750
LweI	GCATC	7 cut(s)	396, 576, 772, 989, 1156, 1678, 2119
MaeI	CTAG	4 cut(s)	503, 747, 1473, 2009
MaeII	ACGT	8 cut(s)	314, 318, 587, 1088, 1185, 1429, 1508, 1783
MaeIII	GTNAC	7 cut(s)	3, 242, 1084, 1144, 1259, 1702, 1989
MfeI	CAATTG	2 cut(s)	1928, 2150
MflI	RGATCY	3 cut(s)	62, 394, 1113
MhlI	GDGCHC	5 cut(s)	109, 157, 256, 602, 1047
MlyI	GAGTC	5 cut(s)	88, 1347, 1445, 1611, 1757
MmeI	TCCRAC	2 cut(s)	822, 957
Mph1103I	ATGCAT	3 cut(s)	289, 982, 1701
MseI	TTAA	7 cut(s)	321, 483, 776, 783, 1224, 1370, 1446
MslI	CAYNNNNRTG	1 cut(s)	231
MspA1I	CMGCKG	1 cut(s)	91
MspI	CCGG	1 cut(s)	1101
MspR9I	CCNGG	3 cut(s)	661, 1190, 1848
MunI	CAATTG	2 cut(s)	1928, 2150
Mva1269I	GAATGC	2 cut(s)	226, 1252
MvaI	CCWGG	3 cut(s)	661, 1190, 1848
MvnI	CGCG	6 cut(s)	529, 562, 940, 1029, 1426, 1496
MwoI	GCNNNNNNNGC	3 cut(s)	94, 260, 1692
NcoI	CCATGG	1 cut(s)	790
NlaIV	GGNNCC	7 cut(s)	396, 658, 796, 1115, 1662, 1852, 1902
NmeAIII	GCCGAG	2 cut(s)	237, 295
NmuCI	GTSAC	6 cut(s)	3, 242, 1084, 1144, 1259, 1989
NsiI	ATGCAT	3 cut(s)	289, 982, 1701
NspI	RCATGY	3 cut(s)	421, 1699, 1703
PaeI	GCATGC	1 cut(s)	1699
PaeR7I	CTCGAG	1 cut(s)	1355
PagI	TCATGA	4 cut(s)	868, 1312, 1738, 1870
PaqCI	CACCTGC	1 cut(s)	88
PciSI	GCTCTTC	2 cut(s)	590, 750
PcsI	WCGNNNNNNNCGW	1 cut(s)	324
PctI	GAATGC	2 cut(s)	226, 1252
PfeI	GAWTC	3 cut(s)	985, 1213, 1544
Pfl23II	CGTACG	1 cut(s)	315
PinAI	ACCGGT	1 cut(s)	1100
PleI	GAGTC	5 cut(s)	87, 1347, 1445, 1610, 1757
PmaCI	CACGTG	1 cut(s)	1784
PmlI	CACGTG	1 cut(s)	1784
PpsI	GAGTC	5 cut(s)	87, 1347, 1445, 1610, 1757
Ppu21I	YACGTR	3 cut(s)	315, 1089, 1784
Psp124BI	GAGCTC	1 cut(s)	157
Psp6I	CCWGG	3 cut(s)	659, 1188, 1846
PspCI	CACGTG	1 cut(s)	1784
PspFI	CCCAGC	2 cut(s)	137, 1077
PspGI	CCWGG	3 cut(s)	659, 1188, 1846
PspLI	CGTACG	1 cut(s)	315
PspN4I	GGNNCC	7 cut(s)	396, 658, 796, 1115, 1662, 1852, 1902
PspPI	GGNCC	1 cut(s)	196
PstI	CTGCAG	1 cut(s)	1255
PstNI	CAGNNNCTG	1 cut(s)	91
PsuI	RGATCY	3 cut(s)	62, 394, 1113
RsaI	GTAC	4 cut(s)	317, 493, 1336, 1396
RsaNI	GTAC	4 cut(s)	316, 492, 1335, 1395
RseI	CAYNNNNRTG	1 cut(s)	231
SacI	GAGCTC	1 cut(s)	157
SapI	GCTCTTC	2 cut(s)	590, 750
SaqAI	TTAA	7 cut(s)	321, 483, 776, 783, 1224, 1370, 1446
Sau96I	GGNCC	1 cut(s)	196
ScaI	AGTACT	2 cut(s)	493, 1396
SchI	GAGTC	5 cut(s)	88, 1347, 1445, 1611, 1757
ScrFI	CCNGG	3 cut(s)	661, 1190, 1848
SduI	GDGCHC	5 cut(s)	109, 157, 256, 602, 1047
SfaNI	GCATC	7 cut(s)	396, 576, 772, 989, 1156, 1678, 2119
SfcI	CTRYAG	1 cut(s)	1251
Sfr274I	CTCGAG	1 cut(s)	1355
SinI	GGWCC	1 cut(s)	196
SlaI	CTCGAG	1 cut(s)	1355
SmiMI	CAYNNNNRTG	1 cut(s)	231
SmlI	CTYRAG	3 cut(s)	921, 1355, 1952
SmoI	CTYRAG	3 cut(s)	921, 1355, 1952
SnaBI	TACGTA	1 cut(s)	315
SpeI	ACTAGT	1 cut(s)	1472
SphI	GCATGC	1 cut(s)	1699
SspMI	CTAG	4 cut(s)	503, 747, 1473, 2009
SstI	GAGCTC	1 cut(s)	157
StyD4I	CCNGG	3 cut(s)	659, 1188, 1846
StyI	CCWWGG	2 cut(s)	423, 790
TaaI	ACNGT	5 cut(s)	200, 468, 479, 1342, 1868
TaiI	ACGT	8 cut(s)	317, 321, 590, 1091, 1188, 1432, 1511, 1786
TatI	WGTACW	2 cut(s)	491, 1394
TauI	GCSGC	3 cut(s)	91, 97, 1000
TfiI	GAWTC	3 cut(s)	985, 1213, 1544
Tru1I	TTAA	7 cut(s)	321, 483, 776, 783, 1224, 1370, 1446
Tru9I	TTAA	7 cut(s)	321, 483, 776, 783, 1224, 1370, 1446
TscAI	CASTG	4 cut(s)	310, 419, 737, 1866
TseFI	GTSAC	6 cut(s)	3, 242, 1084, 1144, 1259, 1989
Tsp45I	GTSAC	6 cut(s)	3, 242, 1084, 1144, 1259, 1989
TspDTI	ATGAA	5 cut(s)	162, 200, 1665, 2051, 2058
TspGWI	ACGGA	2 cut(s)	1785, 1826
TspRI	CASTG	4 cut(s)	310, 419, 737, 1866
VpaK11BI	GGWCC	1 cut(s)	196
XagI	CCTNNNNNAGG	1 cut(s)	821
XapI	RAATTY	1 cut(s)	1959
XceI	RCATGY	3 cut(s)	421, 1699, 1703
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2149
XhoI	CTCGAG	1 cut(s)	1355
XspI	CTAG	4 cut(s)	503, 747, 1473, 2009
ZraI	GACGTC	1 cut(s)	1186
ZrmI	AGTACT	2 cut(s)	493, 1396
Zsp2I	ATGCAT	3 cut(s)	289, 982, 1701

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.