FvH4_1g14012

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
7733190 .. 7734626
1437 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g14012.t1

Sequence Viewer

Length: 1098 bp
ATGGGCCATCTCATCCCTGTTCTTGAGCTCGGGAAACGACTCGTCACCCACCAAAACTTCACTGTCACAATCTTCTTCGTGCCATCGCAAACTTCCGCTGCCGAATCTGAACTCCTCGACGCATCTGCCTTTCCACGCGGTCTAGACATTATCGAGCTCCCATCACGAGATGTTTCTTGCCTTCTCCACCCTGACGCTGCCGTCGTTACGCGCCTGGCAGAAATGATGCGACAAGTACGACCTGCGTTTCGTGCCGCCTTGCATGACATGATTAACTTCCGTCATCGTCGTCCCACAGTGCTCATCGTCGACCTGTTCGGCACCGAATCTCTGCCCATTGCCGAGGAGTTTGGGATTCCGAAGTATGTTTACATTGCTTCCAATGCATGGTTCCTTTCTGTAATGATATATTCTCCAACTCTAGATGAGCAAGTCAGGGGTGAATTCGTTAACCTCAAAGATCCACTAGCAATTCCGGGATGCAGACAATTATCACCGGAACTTGATATCGTGGACGCTTTGCTGGACCGGAGCAATCAGCAGTACGACGAGCACATGCTGATGGGAAGAGGAATCCCAAAGGGTGATGGGATTCTGATAAACATATGGAAGGAATTGGAGACAAAGACCCTAGCAGCACTTAGAGATGAGAAATTCTTGGGCCGATTATCAAACGGACCGGTTTTTCCTATTGGGCCTTTGCTGAGGCCTAAGTCTTCCGGCTCGAGGGGTGATGTGTTGGGCTGGCTAGATGAGCAGCCCAATGAATCTGTGATTTACGTGTCATTTGGAAGCGGCGGGGCCTTGTCGTATGAGCAAATGGTCGAGCTAGCTTGGGGACTTGAGATGAGTCAACAGAGGTTCGTTTGGGTCATACGGTCGCCGATTGTAACATCTGCCGATGAAGCATTTTTCACGGCAGGGAGTCACGGTGGCGATGCCAGCAATCCAATTAGAGCCAAGAATCTCAAATTCAGTGGTGCAAAAGCTTTGGAACAGGGTGGTTCCTCTTATAATGCTCTTTCTCAGTTCACTAAACATGCTGAAATGTTCTTGCAATTTGCAGATGGTGTTGTTCCTCCTTCCCAAGTTCCATGA

Protein Analysis

366

Amino Acids

40.31

Weight (kDa)

5.45

Isoelectric Point (pI)

38.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1014
AasI GACNNNNNNGTC 1 cut(s) 200
Acc36I ACCTGC 1 cut(s) 250
AccB1I GGYRCC 1 cut(s) 320
AccB7I CCANNNNNTGG 1 cut(s) 387
AccI GTMKAC 1 cut(s) 309
AccII CGCG 2 cut(s) 138, 211
AciI CCGC 5 cut(s) 96, 138, 255, 795, 798
AclWI GGATC 1 cut(s) 455
AcsI RAATTY 3 cut(s) 443, 653, 971
AfaI GTAC 2 cut(s) 237, 545
AfiI CCNNNNNNNGG 2 cut(s) 387, 726
AflIII ACRYGT 1 cut(s) 780
AgeI ACCGGT 1 cut(s) 679
AjnI CCWGG 1 cut(s) 213
AjuI GAANNNNNNNTTGG 2 cut(s) 374, 406
AluBI AGCT 5 cut(s) 28, 157, 829, 833, 989
AluI AGCT 5 cut(s) 28, 157, 829, 833, 989
Alw21I GWGCWC 4 cut(s) 30, 159, 303, 555
Alw26I GTCTC 1 cut(s) 614
AlwI GGATC 1 cut(s) 455
Ama87I CYCGRG 2 cut(s) 29, 724
AoxI GGCC 5 cut(s) 4, 661, 695, 707, 801
ApeKI GCWGC 4 cut(s) 98, 197, 635, 757
ApoI RAATTY 3 cut(s) 443, 653, 971
ArsI GACNNNNNNTTYG 2 cut(s) 231, 263
AsiGI ACCGGT 1 cut(s) 679
AspLEI GCGC 1 cut(s) 213
AspS9I GGNCC 6 cut(s) 4, 526, 661, 677, 695, 801
AsuC2I CCSGG 1 cut(s) 477
AsuHPI GGTGA 5 cut(s) 37, 452, 486, 596, 743
AsuNHI GCTAGC 1 cut(s) 829
AvaI CYCGRG 2 cut(s) 29, 724
AvaII GGWCC 2 cut(s) 526, 677
BanI GGYRCC 1 cut(s) 320
BanII GRGCYC 2 cut(s) 30, 159
BarI GAAGNNNNNNTAC 2 cut(s) 353, 385
BauI CACGAG 1 cut(s) 165
BbsI GAAGAC 1 cut(s) 708
Bbv12I GWGCWC 4 cut(s) 30, 159, 303, 555
BbvCI CCTCAGC 1 cut(s) 704
BbvI GCAGC 4 cut(s) 85, 184, 647, 769
BccI CCATC 6 cut(s) 15, 91, 169, 556, 581, 1061
BceAI ACGGC 2 cut(s) 185, 933
BcgI CGANNNNNNTGC 2 cut(s) 107, 141
BciT130I CCWGG 1 cut(s) 215
BcnI CCSGG 1 cut(s) 477
BcoDI GTCTC 1 cut(s) 614
BfaI CTAG 6 cut(s) 143, 422, 467, 632, 749, 830
BfuAI ACCTGC 1 cut(s) 250
BisI GCNGC 6 cut(s) 99, 198, 255, 636, 758, 796
BlsI GCNGC 6 cut(s) 100, 199, 256, 637, 759, 797
Bme1390I CCNGG 2 cut(s) 215, 477
Bme18I GGWCC 2 cut(s) 526, 677
BmeT110I CYCGRG 2 cut(s) 29, 724
BmgT120I GGNCC 6 cut(s) 4, 526, 661, 677, 695, 801
BmiI GGNNCC 4 cut(s) 322, 392, 802, 1006
BmrFI CCNGG 2 cut(s) 215, 477
BmsI GCATC 4 cut(s) 131, 216, 470, 928
BmtI GCTAGC 1 cut(s) 833
BpiI GAAGAC 1 cut(s) 708
Bpu10I CCTNAGC 1 cut(s) 704
BpuEI CTTGAG 2 cut(s) 44, 863
BpuMI CCSGG 1 cut(s) 477
BsaAI YACGTR 1 cut(s) 781
BsaJI CCNNGG 1 cut(s) 342
BsaWI WCCGGW 3 cut(s) 496, 528, 679
BsaXI ACNNNNNCTCC 2 cut(s) 916, 946
Bsc4I CCNNNNNNNGG 2 cut(s) 387, 726
Bse118I RCCGGY 1 cut(s) 679
Bse3DI GCAATG 2 cut(s) 336, 372
BseBI CCWGG 1 cut(s) 215
BseDI CCNNGG 1 cut(s) 342
BseGI GGATG 2 cut(s) 12, 485
BseLI CCNNNNNNNGG 2 cut(s) 387, 726
BseMI GCAATG 2 cut(s) 336, 372
BseMII CTCAG 2 cut(s) 695, 1040
BseRI GAGGAG 2 cut(s) 104, 359
BseXI GCAGC 4 cut(s) 85, 184, 647, 769
Bsh1236I CGCG 2 cut(s) 138, 211
Bsh1285I CGRYCG 1 cut(s) 881
BshFI GGCC 5 cut(s) 6, 663, 697, 709, 803
BshNI GGYRCC 1 cut(s) 320
BshTI ACCGGT 1 cut(s) 679
BsiEI CGRYCG 1 cut(s) 881
BsiHKAI GWGCWC 4 cut(s) 30, 159, 303, 555
BsiHKCI CYCGRG 2 cut(s) 29, 724
BsiSI CCGG 5 cut(s) 476, 497, 529, 680, 720
BslFI GGGAC 2 cut(s) 276, 852
BslI CCNNNNNNNGG 2 cut(s) 387, 726
BsmAI GTCTC 1 cut(s) 614
BsmFI GGGAC 2 cut(s) 276, 852
BsnI GGCC 5 cut(s) 6, 663, 697, 709, 803
BsoBI CYCGRG 2 cut(s) 29, 724
Bsp1286I GDGCHC 4 cut(s) 30, 159, 303, 555
Bsp143I GATC 1 cut(s) 460
BspACI CCGC 5 cut(s) 96, 138, 255, 795, 798
BspANI GGCC 5 cut(s) 6, 663, 697, 709, 803
BspCNI CTCAG 2 cut(s) 696, 1039
BspFNI CGCG 2 cut(s) 138, 211
BspLI GGNNCC 4 cut(s) 322, 392, 802, 1006
BspMI ACCTGC 1 cut(s) 250
BspOI GCTAGC 1 cut(s) 833
BspPI GGATC 1 cut(s) 455
BspT107I GGYRCC 1 cut(s) 320
BsrDI GCAATG 2 cut(s) 336, 372
BsrFI RCCGGY 1 cut(s) 679
BssAI RCCGGY 1 cut(s) 679
BssECI CCNNGG 1 cut(s) 342
BssMI GATC 1 cut(s) 460
BssSI CACGAG 1 cut(s) 165
Bst2BI CACGAG 1 cut(s) 165
Bst2UI CCWGG 1 cut(s) 215
Bst4CI ACNGT 4 cut(s) 64, 298, 879, 932
Bst6I CTCTTC 1 cut(s) 562
BstBAI YACGTR 1 cut(s) 781
BstC8I GCNNGC 3 cut(s) 746, 831, 943
BstDEI CTNAG 4 cut(s) 641, 704, 711, 1026
BstF5I GGATG 2 cut(s) 12, 485
BstFNI CGCG 2 cut(s) 138, 211
BstHHI GCGC 1 cut(s) 213
BstKTI GATC 1 cut(s) 463
BstMAI GTCTC 1 cut(s) 614
BstMBI GATC 1 cut(s) 460
BstMCI CGRYCG 1 cut(s) 881
BstMWI GCNNNNNNNGC 5 cut(s) 251, 383, 754, 905, 942
BstNI CCWGG 1 cut(s) 215
BstNSI RCATGY 2 cut(s) 559, 1043
BstSCI CCNGG 2 cut(s) 213, 475
BstUI CGCG 2 cut(s) 138, 211
BstV1I GCAGC 4 cut(s) 85, 184, 647, 769
BstV2I GAAGAC 1 cut(s) 708
BstX2I RGATCY 1 cut(s) 460
BstYI RGATCY 1 cut(s) 460
BsuRI GGCC 5 cut(s) 6, 663, 697, 709, 803
BtgZI GCGATG 2 cut(s) 69, 951
BtsCI GGATG 2 cut(s) 12, 485
BtsIMutI CAGTG 3 cut(s) 60, 303, 982
BveI ACCTGC 1 cut(s) 250
Cac8I GCNNGC 3 cut(s) 746, 831, 943
CfoI GCGC 1 cut(s) 213
Cfr10I RCCGGY 1 cut(s) 679
Cfr13I GGNCC 6 cut(s) 4, 526, 661, 677, 695, 801
CpoI CGGWCCG 1 cut(s) 677
CseI GACGC 3 cut(s) 128, 203, 524
Csp6I GTAC 2 cut(s) 236, 544
CspAI ACCGGT 1 cut(s) 679
CspCI CAANNNNNGTGG 2 cut(s) 958, 993
CspI CGGWCCG 1 cut(s) 677
CviAII CATG 6 cut(s) 263, 268, 387, 556, 1040, 1095
CviQI GTAC 2 cut(s) 236, 544
DdeI CTNAG 4 cut(s) 641, 704, 711, 1026
DpnI GATC 1 cut(s) 462
DpnII GATC 1 cut(s) 460
DrdI GACNNNNNNGTC 1 cut(s) 200
DseDI GACNNNNNNGTC 1 cut(s) 200
Eam1104I CTCTTC 1 cut(s) 562
EarI CTCTTC 1 cut(s) 562
Ecl136II GAGCTC 2 cut(s) 28, 157
Eco147I AGGCCT 1 cut(s) 709
Eco24I GRGCYC 2 cut(s) 30, 159
Eco32I GATATC 1 cut(s) 508
Eco47I GGWCC 2 cut(s) 526, 677
Eco53kI GAGCTC 2 cut(s) 28, 157
Eco88I CYCGRG 2 cut(s) 29, 724
EcoICRI GAGCTC 2 cut(s) 28, 157
EcoO109I RGGNCCY 1 cut(s) 801
EcoRI GAATTC 1 cut(s) 443
EcoRII CCWGG 1 cut(s) 213
EcoRV GATATC 1 cut(s) 508
EcoT22I ATGCAT 1 cut(s) 388
EcoT38I GRGCYC 2 cut(s) 30, 159
FaeI CATG 6 cut(s) 266, 271, 390, 559, 1043, 1098
FaqI GGGAC 2 cut(s) 276, 852
FatI CATG 6 cut(s) 262, 267, 386, 555, 1039, 1094
FauI CCCGC 1 cut(s) 791
FauNDI CATATG 1 cut(s) 605
FblI GTMKAC 1 cut(s) 309
Fnu4HI GCNGC 6 cut(s) 99, 198, 255, 636, 758, 796
FokI GGATG 1 cut(s) 492
FriOI GRGCYC 2 cut(s) 30, 159
Fsp4HI GCNGC 6 cut(s) 99, 198, 255, 636, 758, 796
FspBI CTAG 6 cut(s) 143, 422, 467, 632, 749, 830
GlaI GCGC 1 cut(s) 212
GluI GCNGC 6 cut(s) 99, 198, 255, 636, 758, 796
HaeIII GGCC 5 cut(s) 6, 663, 697, 709, 803
HapII CCGG 5 cut(s) 476, 497, 529, 680, 720
HgaI GACGC 3 cut(s) 128, 203, 524
HhaI GCGC 1 cut(s) 213
Hin1II CATG 6 cut(s) 266, 271, 390, 559, 1043, 1098
Hin6I GCGC 1 cut(s) 211
HinP1I GCGC 1 cut(s) 211
HincII GTYRAC 3 cut(s) 310, 451, 854
HindII GTYRAC 3 cut(s) 310, 451, 854
HindIII AAGCTT 1 cut(s) 987
HpaI GTTAAC 1 cut(s) 451
HpaII CCGG 5 cut(s) 476, 497, 529, 680, 720
HphI GGTGA 5 cut(s) 37, 452, 486, 596, 743
Hpy166II GTNNAC 6 cut(s) 310, 370, 451, 514, 854, 1032
Hpy188I TCNGA 3 cut(s) 109, 360, 597
Hpy188III TCNNGA 5 cut(s) 23, 31, 143, 165, 422
Hpy8I GTNNAC 6 cut(s) 310, 370, 451, 514, 854, 1032
Hpy99I CGWCG 5 cut(s) 122, 206, 291, 311, 551
HpyAV CCTTC 3 cut(s) 191, 604, 1092
HpyCH4III ACNGT 4 cut(s) 64, 298, 879, 932
HpyCH4IV ACGT 1 cut(s) 780
HpyCH4V TGCA 6 cut(s) 262, 386, 483, 983, 1057, 1064
HpyF10VI GCNNNNNNNGC 5 cut(s) 251, 383, 754, 905, 942
HpyF3I CTNAG 4 cut(s) 641, 704, 711, 1026
HpySE526I ACGT 1 cut(s) 780
Hsp92II CATG 6 cut(s) 266, 271, 390, 559, 1043, 1098
HspAI GCGC 1 cut(s) 211
KspAI GTTAAC 1 cut(s) 451
Kzo9I GATC 1 cut(s) 460
LmnI GCTCC 2 cut(s) 162, 531
Lsp1109I GCAGC 4 cut(s) 85, 184, 647, 769
LweI GCATC 4 cut(s) 131, 216, 470, 928
MaeI CTAG 6 cut(s) 143, 422, 467, 632, 749, 830
MaeII ACGT 1 cut(s) 780
MaeIII GTNAC 5 cut(s) 43, 64, 205, 889, 926
MalI GATC 1 cut(s) 462
MboI GATC 1 cut(s) 460
MboII GAAGA 4 cut(s) 64, 67, 579, 708
MflI RGATCY 1 cut(s) 460
MhlI GDGCHC 4 cut(s) 30, 159, 303, 555
MluCI AATT 8 cut(s) 443, 471, 488, 614, 653, 951, 971, 1058
MlyI GAGTC 3 cut(s) 33, 859, 934
MmeI TCCRAC 1 cut(s) 440
MnlI CCTC 9 cut(s) 125, 337, 464, 563, 699, 720, 852, 1018, 1089
Mph1103I ATGCAT 1 cut(s) 388
MseI TTAA 2 cut(s) 273, 450
MslI CAYNNNNRTG 1 cut(s) 560
MspA1I CMGCKG 1 cut(s) 98
MspI CCGG 5 cut(s) 476, 497, 529, 680, 720
MspR9I CCNGG 2 cut(s) 215, 477
MvaI CCWGG 1 cut(s) 215
MvnI CGCG 2 cut(s) 138, 211
MwoI GCNNNNNNNGC 5 cut(s) 251, 383, 754, 905, 942
NciI CCSGG 1 cut(s) 477
NdeI CATATG 1 cut(s) 605
NdeII GATC 1 cut(s) 460
NheI GCTAGC 1 cut(s) 829
NlaIII CATG 6 cut(s) 266, 271, 390, 559, 1043, 1098
NlaIV GGNNCC 4 cut(s) 322, 392, 802, 1006
NmeAIII GCCGAG 1 cut(s) 367
NmuCI GTSAC 3 cut(s) 43, 64, 926
NsiI ATGCAT 1 cut(s) 388
NspI RCATGY 2 cut(s) 559, 1043
PaeR7I CTCGAG 1 cut(s) 724
PceI AGGCCT 1 cut(s) 709
PcsI WCGNNNNNNNCGW 1 cut(s) 201
PfeI GAWTC 7 cut(s) 104, 326, 355, 573, 592, 767, 964
PflMI CCANNNNNTGG 1 cut(s) 387
PfoI TCCNGGA 1 cut(s) 475
PinAI ACCGGT 1 cut(s) 679
PkrI GCNGC 6 cut(s) 100, 199, 256, 637, 759, 797
PleI GAGTC 3 cut(s) 33, 858, 933
PpsI GAGTC 3 cut(s) 33, 858, 933
Ppu21I YACGTR 1 cut(s) 781
PsiI TTATAA 1 cut(s) 1014
Psp124BI GAGCTC 2 cut(s) 30, 159
Psp6I CCWGG 1 cut(s) 213
PspGI CCWGG 1 cut(s) 213
PspN4I GGNNCC 4 cut(s) 322, 392, 802, 1006
PspPI GGNCC 6 cut(s) 4, 526, 661, 677, 695, 801
PspXI VCTCGAGB 1 cut(s) 724
PsuI RGATCY 1 cut(s) 460
RsaI GTAC 2 cut(s) 237, 545
RsaNI GTAC 2 cut(s) 236, 544
RseI CAYNNNNRTG 1 cut(s) 560
Rsr2I CGGWCCG 1 cut(s) 677
RsrII CGGWCCG 1 cut(s) 677
SacI GAGCTC 2 cut(s) 30, 159
SalI GTCGAC 1 cut(s) 308
SaqAI TTAA 2 cut(s) 273, 450
SatI GCNGC 6 cut(s) 99, 198, 255, 636, 758, 796
Sau3AI GATC 1 cut(s) 460
Sau96I GGNCC 6 cut(s) 4, 526, 661, 677, 695, 801
SchI GAGTC 3 cut(s) 33, 859, 934
ScrFI CCNGG 2 cut(s) 215, 477
SduI GDGCHC 4 cut(s) 30, 159, 303, 555
SfaNI GCATC 4 cut(s) 131, 216, 470, 928
Sfr274I CTCGAG 1 cut(s) 724
SinI GGWCC 2 cut(s) 526, 677
SlaI CTCGAG 1 cut(s) 724
SmiMI CAYNNNNRTG 1 cut(s) 560
SmlI CTYRAG 3 cut(s) 23, 724, 842
SmoI CTYRAG 3 cut(s) 23, 724, 842
Sse9I AATT 8 cut(s) 443, 471, 488, 614, 653, 951, 971, 1058
SseBI AGGCCT 1 cut(s) 709
SsiI CCGC 5 cut(s) 96, 138, 255, 795, 798
SspMI CTAG 6 cut(s) 143, 422, 467, 632, 749, 830
SstI GAGCTC 2 cut(s) 30, 159
StuI AGGCCT 1 cut(s) 709
StyD4I CCNGG 2 cut(s) 213, 475
TaaI ACNGT 4 cut(s) 64, 298, 879, 932
TaiI ACGT 1 cut(s) 783
TaqI TCGA 5 cut(s) 117, 153, 309, 725, 825
TasI AATT 8 cut(s) 443, 471, 488, 614, 653, 951, 971, 1058
TauI GCSGC 2 cut(s) 257, 798
TfiI GAWTC 7 cut(s) 104, 326, 355, 573, 592, 767, 964
Tru1I TTAA 2 cut(s) 273, 450
Tru9I TTAA 2 cut(s) 273, 450
TscAI CASTG 3 cut(s) 67, 303, 982
TseFI GTSAC 3 cut(s) 43, 64, 926
TseI GCWGC 4 cut(s) 98, 197, 635, 757
Tsp45I GTSAC 3 cut(s) 43, 64, 926
TspDTI ATGAA 2 cut(s) 780, 918
TspGWI ACGGA 2 cut(s) 269, 690
TspRI CASTG 3 cut(s) 67, 303, 982
Van91I CCANNNNNTGG 1 cut(s) 387
VpaK11BI GGWCC 2 cut(s) 526, 677
XapI RAATTY 3 cut(s) 443, 653, 971
XbaI TCTAGA 2 cut(s) 142, 421
XceI RCATGY 2 cut(s) 559, 1043
XhoI CTCGAG 1 cut(s) 724
XmiI GTMKAC 1 cut(s) 309
XspI CTAG 6 cut(s) 143, 422, 467, 632, 749, 830
Zsp2I ATGCAT 1 cut(s) 388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.